View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11788_high_121 (Length: 239)
Name: NF11788_high_121
Description: NF11788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11788_high_121 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 45236398 - 45236621
Alignment:
| Q |
1 |
gcaatatatgagtaaatgaaaatttgatgatggaacatgttcattattataaaccacaaatcctttgaaatgagatttcatttaacttgtctttagtgct |
100 |
Q |
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| T |
45236398 |
gcaatatatgagtaaatgaaaatttgatgatggaacatgttcattattataaaccacaaatcctttgaaatgagatttcatttaacttgtctttagtgct |
45236497 |
T |
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| Q |
101 |
ataaaagttaaccctgatagaaaatccttcacatttcatcatatctgtcaaaatggcccatcaagagcacttattatacttgttttgctcttgaaggaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45236498 |
ataaaagttaaccctgatagaaaatccttcacatttcatcatatctgtcaaaatggcccatcaagagcacttattatacttgttttgctcttgaaggaaa |
45236597 |
T |
|
| Q |
201 |
cctcaatgtcactccctactaact |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
45236598 |
cctcaatgtcactccctactaact |
45236621 |
T |
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