View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11788_high_124 (Length: 236)
Name: NF11788_high_124
Description: NF11788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11788_high_124 |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 36561404 - 36561216
Alignment:
| Q |
16 |
cttacatcccatcaatataatgcggtcaatagccagaagatactgtaattccctgtaagaatataaatcaacattaatgaaagagcactaaaattcttgc |
115 |
Q |
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| T |
36561404 |
cttacatcccatcaatataatgtggtcaatagccagaagatactgtaattccctgtaagaatataaatcaacattaatgaaagagcactaaaattcttgc |
36561305 |
T |
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| Q |
116 |
tcattaattatgttgcagatgtgctaatgattaagaccaccggtctataattaataactatatgtgctctctgcagcatataaacagta |
204 |
Q |
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| T |
36561304 |
tcattaattatgttgcagatgtgctaatgattaagaccaccggtctataattaataactatatgtgctctctgtagcatataaacagta |
36561216 |
T |
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