View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11788_low_111 (Length: 250)
Name: NF11788_low_111
Description: NF11788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11788_low_111 |
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Alignment Details
Target: chr6 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 24791948 - 24792181
Alignment:
| Q |
1 |
tagccaaaaagcttgtatcgaaccctgaattttgaaagtcacttggaatccttcctatcaaatgattagaggatagattgagattggtgagtcttggaag |
100 |
Q |
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| T |
24791948 |
tagccaaaaagcttgtatcgaaccctgaattttgaaagtcacttggaatccttcctatcaaatgattagaggatagattgagattggtgagtcttggaag |
24792047 |
T |
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| Q |
101 |
ttgagacggaatttcgccagaaaattcattttctgacaaatcaagttgacttaggacaggtaattttccaattgcatctggaatttgtccagaaagttgg |
200 |
Q |
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|||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24792048 |
ttgagatggaatttcgccagaaagttcattttctgacaaatcaagttgacttaggacaggtaattttccaattgcatctggaatttgtccagaaagttgg |
24792147 |
T |
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| Q |
201 |
ttctggctcaaattaagagttactaaggacttcc |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
24792148 |
ttctggctcaaattaagagttactaaggacttcc |
24792181 |
T |
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