View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11788_low_117 (Length: 245)
Name: NF11788_low_117
Description: NF11788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11788_low_117 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 18719838 - 18719612
Alignment:
| Q |
6 |
gatacatcaaaaaccttccacaatcaaag------tttggaagttgaaaacttaaatttgttttagtattctgctacgttagaaaagatatttatctatg |
99 |
Q |
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| T |
18719838 |
gatacatcaaaaaccttccacaatcaaagccatcgtttggaagttgaaaacttaaatttgttttagtattctgctatgttagaaaatatatttatctatg |
18719739 |
T |
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| Q |
100 |
gatctccttggaagcaatatgtacaatcccaatgaatacagatccaccagagtatgatacaaatcttaataatactgtaagtcacatagacctaacattt |
199 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18719738 |
gatctcctttgaagcaatatgtacaatcccaatgaatacagatccaccagagtatgatacaaatcttaataatactgtaagtcacatagacctaacattt |
18719639 |
T |
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| Q |
200 |
ttatgatttccacttctatggtgtact |
226 |
Q |
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||||||||||||||||||||||||||| |
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| T |
18719638 |
ttatgatttccacttctatggtgtact |
18719612 |
T |
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