View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11788_low_120 (Length: 240)
Name: NF11788_low_120
Description: NF11788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11788_low_120 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 45500659 - 45500883
Alignment:
| Q |
1 |
ctttggcattcatttgcttaagctcaacagacataaatccttggccgtcgtagtaaaacttgaccccatctctcctatttttatcaacgtctcctttcca |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45500659 |
ctttggcattcatttgcttaagctcaacagacataaatccttgtccgtcatagtaaaacttgaccccatctctcctatttttatcaacgtctcctttcca |
45500758 |
T |
|
| Q |
101 |
tgcctttgagcctccaccactagtcaagaactgcatttggctgcaaagccactcaaatttcattaaggtgatattgatgattcagtaaactaacaatcaa |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
45500759 |
tgcctttgagcctccaccactagtcaagaactgcatttggctgcaaagccact-aaatttcattaaggtgatattgatgattcagtaaactaacaatcaa |
45500857 |
T |
|
| Q |
201 |
acaagtccaatttaaatcaaggtaat |
226 |
Q |
| |
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|||||||||||||||||||||||||| |
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|
| T |
45500858 |
acaagtccaatttaaatcaaggtaat |
45500883 |
T |
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