View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11788_low_131 (Length: 229)

Name: NF11788_low_131
Description: NF11788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11788_low_131
NF11788_low_131
[»] chr4 (44 HSPs)
chr4 (6-125)||(32429120-32429239)
chr4 (6-121)||(18716742-18716857)
chr4 (6-125)||(3409435-3409554)
chr4 (6-125)||(3424199-3424318)
chr4 (6-125)||(18671088-18671207)
chr4 (6-121)||(18737415-18737530)
chr4 (35-125)||(25618163-25618253)
chr4 (22-125)||(34279356-34279459)
chr4 (6-106)||(35091133-35091232)
chr4 (6-106)||(35096246-35096345)
chr4 (22-106)||(14643647-14643731)
chr4 (22-106)||(18716698-18716782)
chr4 (22-106)||(18737371-18737455)
chr4 (151-225)||(30019926-30020000)
chr4 (64-125)||(47071649-47071710)
chr4 (64-125)||(54859062-54859123)
chr4 (22-106)||(3409510-3409594)
chr4 (22-106)||(18671048-18671132)
chr4 (22-106)||(54859079-54859163)
chr4 (151-225)||(32429359-32429433)
chr4 (64-121)||(14643630-14643687)
chr4 (169-225)||(18737216-18737272)
chr4 (22-106)||(47071609-47071693)
chr4 (173-222)||(47071465-47071514)
chr4 (169-225)||(18716543-18716599)
chr4 (22-106)||(25618209-25618293)
chr4 (34-106)||(34279427-34279499)
chr4 (170-225)||(18670894-18670949)
chr4 (171-225)||(34128333-34128387)
chr4 (168-225)||(35096082-35096139)
chr4 (22-106)||(30019750-30019833)
chr4 (22-106)||(32429195-32429279)
chr4 (172-224)||(34279588-34279640)
chr4 (171-225)||(14643826-14643880)
chr4 (80-125)||(34279355-34279400)
chr4 (172-225)||(54859254-54859307)
chr4 (81-125)||(18716797-18716841)
chr4 (64-116)||(22118974-22119026)
chr4 (173-221)||(25618387-25618435)
chr4 (80-125)||(30019749-30019794)
chr4 (168-225)||(35090969-35091026)
chr4 (81-125)||(18737470-18737514)
chr4 (81-125)||(35091173-35091217)
chr4 (81-125)||(35096286-35096330)
[»] chr5 (28 HSPs)
chr5 (6-125)||(2023211-2023330)
chr5 (6-106)||(9872311-9872410)
chr5 (6-106)||(9877426-9877525)
chr5 (6-106)||(39904063-39904162)
chr5 (6-106)||(39909176-39909275)
chr5 (151-225)||(2023018-2023092)
chr5 (22-106)||(2023171-2023255)
chr5 (22-121)||(35368744-35368843)
chr5 (22-106)||(35368803-35368887)
chr5 (173-225)||(43540857-43540909)
chr5 (35-106)||(13556219-13556290)
chr5 (168-225)||(13556398-13556455)
chr5 (22-106)||(43379601-43379685)
chr5 (34-125)||(43379641-43379732)
chr5 (36-106)||(43540699-43540768)
chr5 (168-225)||(4555707-4555764)
chr5 (168-225)||(9877632-9877689)
chr5 (64-125)||(35368727-35368788)
chr5 (168-225)||(39903899-39903956)
chr5 (168-225)||(39909012-39909069)
chr5 (168-225)||(9872517-9872574)
chr5 (64-125)||(43540668-43540729)
chr5 (171-225)||(35368987-35369041)
chr5 (81-125)||(9872326-9872370)
chr5 (81-125)||(9877441-9877485)
chr5 (81-125)||(39904103-39904147)
chr5 (81-125)||(39909216-39909260)
chr5 (60-104)||(43402012-43402056)
[»] chr3 (58 HSPs)
chr3 (6-125)||(49784744-49784863)
chr3 (6-106)||(5481375-5481474)
chr3 (6-106)||(1302131-1302230)
chr3 (6-106)||(4050026-4050125)
chr3 (6-106)||(4055160-4055259)
chr3 (6-106)||(5457898-5457997)
chr3 (6-106)||(10672825-10672924)
chr3 (6-106)||(10677938-10678037)
chr3 (6-106)||(31081394-31081493)
chr3 (21-106)||(31076303-31076388)
chr3 (6-106)||(6852839-6852938)
chr3 (6-106)||(6857942-6858041)
chr3 (6-106)||(8458530-8458629)
chr3 (6-106)||(8464968-8465067)
chr3 (6-106)||(10584745-10584844)
chr3 (6-106)||(10591182-10591281)
chr3 (6-106)||(33702486-33702585)
chr3 (22-125)||(29827661-29827764)
chr3 (173-225)||(18024246-18024298)
chr3 (172-225)||(3187551-3187604)
chr3 (168-225)||(5458105-5458162)
chr3 (168-225)||(5481581-5481638)
chr3 (168-225)||(6853045-6853102)
chr3 (168-225)||(6858148-6858205)
chr3 (168-225)||(8458365-8458422)
chr3 (168-225)||(8464804-8464861)
chr3 (21-106)||(49784704-49784789)
chr3 (22-106)||(29827621-29827705)
chr3 (151-225)||(49784550-49784624)
chr3 (168-225)||(4049861-4049918)
chr3 (168-225)||(10584951-10585008)
chr3 (168-225)||(10591388-10591445)
chr3 (168-225)||(10673031-10673088)
chr3 (168-225)||(10678146-10678203)
chr3 (168-225)||(31076495-31076552)
chr3 (168-225)||(31081600-31081657)
chr3 (168-225)||(33702693-33702750)
chr3 (171-225)||(4054995-4055049)
chr3 (64-106)||(18024091-18024133)
chr3 (171-225)||(29827478-29827532)
chr3 (168-225)||(1302338-1302395)
chr3 (176-225)||(20891113-20891162)
chr3 (168-225)||(33703353-33703410)
chr3 (81-125)||(8458570-8458614)
chr3 (58-106)||(20891354-20891402)
chr3 (6-47)||(20891425-20891466)
chr3 (76-121)||(29827724-29827769)
chr3 (81-125)||(1302146-1302190)
chr3 (81-125)||(4050066-4050110)
chr3 (81-125)||(4055200-4055244)
chr3 (81-125)||(5481390-5481434)
chr3 (81-125)||(6852854-6852898)
chr3 (81-125)||(6857957-6858001)
chr3 (81-125)||(10591197-10591241)
chr3 (81-125)||(10672840-10672884)
chr3 (81-125)||(10677953-10677997)
chr3 (81-125)||(31076304-31076348)
chr3 (81-125)||(31081409-31081453)
[»] chr1 (41 HSPs)
chr1 (6-125)||(43359001-43359119)
chr1 (6-106)||(3468286-3468385)
chr1 (35-125)||(10186437-10186527)
chr1 (37-122)||(10185891-10185976)
chr1 (6-106)||(28574515-28574614)
chr1 (6-106)||(28598527-28598626)
chr1 (157-225)||(10186661-10186729)
chr1 (22-106)||(16051403-16051487)
chr1 (35-125)||(21431537-21431627)
chr1 (126-225)||(19310878-19310974)
chr1 (22-106)||(43358961-43359045)
chr1 (170-225)||(35626226-35626281)
chr1 (24-106)||(21431585-21431667)
chr1 (152-222)||(43358810-43358880)
chr1 (172-225)||(17414633-17414686)
chr1 (21-106)||(19311031-19311116)
chr1 (22-106)||(1188029-1188113)
chr1 (60-125)||(1188069-1188134)
chr1 (6-106)||(3701351-3701451)
chr1 (22-106)||(10186483-10186567)
chr1 (37-121)||(35626382-35626465)
chr1 (169-225)||(44524116-44524172)
chr1 (171-225)||(1187882-1187935)
chr1 (171-225)||(21431768-21431822)
chr1 (60-125)||(1188224-1188289)
chr1 (168-225)||(3465527-3465584)
chr1 (168-225)||(3468121-3468178)
chr1 (80-121)||(16051447-16051488)
chr1 (64-125)||(19311071-19311132)
chr1 (168-225)||(28574351-28574408)
chr1 (168-225)||(28598363-28598420)
chr1 (39-104)||(35653172-35653237)
chr1 (22-106)||(35626338-35626422)
chr1 (35-106)||(13654527-13654598)
chr1 (81-125)||(3701367-3701411)
chr1 (171-218)||(13654398-13654445)
chr1 (6-47)||(17414409-17414450)
chr1 (81-125)||(3468326-3468370)
chr1 (81-125)||(3696233-3696277)
chr1 (81-125)||(28574555-28574599)
chr1 (81-125)||(28598567-28598611)
[»] chr8 (31 HSPs)
chr8 (6-125)||(10340804-10340913)
chr8 (6-106)||(18494064-18494163)
chr8 (6-106)||(34108449-34108548)
chr8 (6-106)||(14314798-14314897)
chr8 (6-106)||(14318502-14318601)
chr8 (6-106)||(26986876-26986975)
chr8 (6-106)||(26981762-26981861)
chr8 (131-225)||(25953215-25953309)
chr8 (22-106)||(1782036-1782117)
chr8 (163-225)||(10341045-10341107)
chr8 (24-106)||(18608554-18608636)
chr8 (171-225)||(18608724-18608778)
chr8 (22-106)||(10340869-10340953)
chr8 (168-225)||(34108283-34108340)
chr8 (34-106)||(43956764-43956836)
chr8 (64-115)||(1782083-1782134)
chr8 (22-121)||(25953017-25953116)
chr8 (168-225)||(14315004-14315061)
chr8 (168-225)||(14318708-14318765)
chr8 (168-225)||(26981969-26982026)
chr8 (168-225)||(26987082-26987139)
chr8 (168-225)||(43956942-43956999)
chr8 (36-106)||(25953090-25953161)
chr8 (171-225)||(18494272-18494326)
chr8 (64-125)||(18608535-18608596)
chr8 (179-225)||(1781893-1781939)
chr8 (81-125)||(14314813-14314857)
chr8 (81-125)||(14318517-14318561)
chr8 (81-125)||(18494079-18494123)
chr8 (81-125)||(26986891-26986935)
chr8 (81-125)||(34108489-34108533)
[»] chr7 (29 HSPs)
chr7 (6-106)||(12851894-12851993)
chr7 (6-106)||(12857007-12857106)
chr7 (6-106)||(14610547-14610646)
chr7 (6-106)||(26051239-26051338)
chr7 (6-106)||(26056352-26056451)
chr7 (6-106)||(26060598-26060697)
chr7 (6-106)||(26065711-26065810)
chr7 (168-225)||(14610418-14610475)
chr7 (37-106)||(5440217-5440286)
chr7 (37-106)||(5449227-5449296)
chr7 (171-225)||(4181478-4181532)
chr7 (79-125)||(35352220-35352266)
chr7 (168-225)||(12851728-12851785)
chr7 (168-225)||(12856843-12856900)
chr7 (168-225)||(26051075-26051132)
chr7 (168-225)||(26056188-26056245)
chr7 (168-225)||(26060434-26060491)
chr7 (168-225)||(26065547-26065604)
chr7 (175-225)||(5440388-5440438)
chr7 (175-225)||(5449398-5449448)
chr7 (172-225)||(37459938-37459991)
chr7 (59-96)||(37459802-37459839)
chr7 (81-125)||(12851934-12851978)
chr7 (81-125)||(12857047-12857091)
chr7 (81-125)||(14610587-14610631)
chr7 (81-125)||(26051279-26051323)
chr7 (81-125)||(26056392-26056436)
chr7 (81-125)||(26060638-26060682)
chr7 (81-125)||(26065751-26065795)
[»] chr2 (23 HSPs)
chr2 (6-106)||(45120605-45120704)
chr2 (36-121)||(20892207-20892292)
chr2 (6-106)||(14917269-14917368)
chr2 (6-106)||(30283337-30283436)
chr2 (6-106)||(17720413-17720512)
chr2 (168-225)||(30283534-30283591)
chr2 (6-74)||(39178849-39178916)
chr2 (22-106)||(42780391-42780475)
chr2 (35-125)||(716512-716602)
chr2 (22-104)||(20892252-20892333)
chr2 (80-125)||(42780431-42780476)
chr2 (171-221)||(16284496-16284546)
chr2 (168-225)||(14917475-14917532)
chr2 (168-225)||(45120440-45120497)
chr2 (151-225)||(42780238-42780311)
chr2 (168-225)||(17720619-17720676)
chr2 (35-106)||(716472-716543)
chr2 (171-225)||(716321-716375)
chr2 (6-56)||(17720086-17720135)
chr2 (76-125)||(716571-716620)
chr2 (81-125)||(14917284-14917328)
chr2 (81-125)||(39178857-39178901)
chr2 (81-125)||(45120645-45120689)
[»] chr6 (24 HSPs)
chr6 (6-106)||(21275991-21276090)
chr6 (35-106)||(21937784-21937855)
chr6 (35-125)||(20751994-20752084)
chr6 (151-225)||(21936756-21936830)
chr6 (35-125)||(21937824-21937914)
chr6 (35-125)||(24508716-24508806)
chr6 (22-106)||(24509918-24510005)
chr6 (22-106)||(20752040-20752124)
chr6 (22-106)||(24508762-24508846)
chr6 (22-125)||(21936529-21936632)
chr6 (173-225)||(24508926-24508978)
chr6 (40-106)||(21936606-21936672)
chr6 (60-125)||(11183068-11183133)
chr6 (37-106)||(11183104-11183173)
chr6 (168-225)||(21275827-21275884)
chr6 (173-225)||(2887544-2887596)
chr6 (173-225)||(2889266-2889318)
chr6 (173-225)||(24509757-24509809)
chr6 (171-225)||(20752214-20752268)
chr6 (172-225)||(11183263-11183316)
chr6 (151-221)||(21937628-21937697)
chr6 (64-125)||(21936512-21936573)
chr6 (60-125)||(21937883-21937948)
chr6 (81-125)||(21276031-21276075)
[»] scaffold0223 (3 HSPs)
scaffold0223 (8-106)||(1908-2005)
scaffold0223 (168-225)||(2112-2169)
scaffold0223 (81-125)||(1921-1965)
[»] scaffold0005 (3 HSPs)
scaffold0005 (22-106)||(173561-173645)
scaffold0005 (64-121)||(173605-173662)
scaffold0005 (171-225)||(173412-173466)
[»] scaffold0006 (2 HSPs)
scaffold0006 (35-106)||(144288-144359)
scaffold0006 (171-218)||(144159-144206)


Alignment Details
Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 32429120 - 32429239
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  32429120 attatttattgatagataatgaaccatgacaatgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaatcataacattgattcaag 32429219  T
Q  106 tgtatatgatcataaccttt 125  Q
    ||||||||||||||||||||    
T  32429220 tgtatatgatcataaccttt 32429239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 18716857 - 18716742
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||||||    
T  18716857 attatttagtgatagataatgaaccatgacattgattcaagtgtatatggttataacctttggccaaatagtgcttaatgaaccataacattgattcaag 18716758  T
Q  106 tgtatatgatcataac 121  Q
    ||||||||||||||||    
T  18716757 tgtatatgatcataac 18716742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 3409435 - 3409554
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||| ||||||||||| ||  ||||||||||||||||||||||||||    
T  3409435 attatttattgatagataatgaaccatgacattgattcaaatgtgtatagttataacctttggcaaaagggtacttaatgaaccataacattgattcaag 3409534  T
Q  106 tgtatatgatcataaccttt 125  Q
    ||||||||||||||||||||    
T  3409535 tgtatatgatcataaccttt 3409554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 3424199 - 3424318
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||| ||| |||||||||||||||||||||| |||    
T  3424199 attatttattgatagataatgaaccatgacattgattcaaatgtgtatggttataacctttggcaaaagggtgcttaatgaaccataacattgatttaag 3424298  T
Q  106 tgtatatgatcataaccttt 125  Q
    |  |||||||||||||||||    
T  3424299 tcgatatgatcataaccttt 3424318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 18671207 - 18671088
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||    
T  18671207 attatttattgataaataatgaaccatgacattgatttaagtgtatatggttataacctttggcaaaatggtgcttaatgaaccataacattgattcaag 18671108  T
Q  106 tgtatatgatcataaccttt 125  Q
    |||||||||  |||||||||    
T  18671107 tgtatatgaagataaccttt 18671088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 18737530 - 18737415
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||  ||| ||||||||||||||||||||||||||    
T  18737530 attatttagtgatagataatgaaccatgacattgattcaagtgtatattgttataacctttggctaaattgtgcttaatgaaccataacattgattcaag 18737431  T
Q  106 tgtatatgatcataac 121  Q
    ||||||||||||||||    
T  18737430 tgtatatgatcataac 18737415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 25618163 - 25618253
Alignment:
Q  35 cattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25618163 cattgattcaagtgtatatggttataacatttggcaaaagggtgcttaatgaaccataacattgattcaagtgtatatgatcataaccttt 25618253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 34279356 - 34279459
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataac 121  Q
    ||||||||| |  |||||||||||||||||||| ||||||| ||||||||| ||||| ||||| |||| ||||||||||| |||||||||||||||||||    
T  34279356 taatgaaccttagcattgattcaagtgtatatgattataacctttggcaaatgagtgcttaataaaccttaacattgatttaagtgtatatgatcataac 34279455  T
Q  122 cttt 125  Q
    ||||    
T  34279456 cttt 34279459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 35091232 - 35091133
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  35091232 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 35091134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 35096345 - 35096246
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  35096345 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 35096247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 14643647 - 14643731
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| | ||||||||||||||||||||| | |||||||||| |||| |||||||||||||||| || |||||||||||||    
T  14643647 taatgaaccttaacattgattcaagtgtatatgatcataacatttgacaaaggagtgtttaatgaaccttagcattgattcaagt 14643731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 18716782 - 18716698
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||| ||||||||||||||||||||| | ||||| ||||| ||||||| | ||||||||||||| |||||||||||||    
T  18716782 taatgaaccataacattgattcaagtgtatatgatcataacttttggtaaaagagagcttaatgaaccatatcattgattcaagt 18716698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 18737455 - 18737371
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||| ||||||||||||||||||||| | ||||| ||||| ||||||| | ||||||||||||| |||||||||||||    
T  18737455 taatgaaccataacattgattcaagtgtatatgatcataacttttggtaaaagagagcttaatgaaccatatcattgattcaagt 18737371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 30019926 - 30020000
Alignment:
Q  151 aacaacacatattttttgacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||| | |||| |||||||||||||||||||||||| |||||||| || |||||||||||||||||||||    
T  30019926 aacaacacacaattttggacagaattttgttacattaacaacataattcttcaccattctcttactctaaatcat 30020000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 47071710 - 47071649
Alignment:
Q  64 tttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47071710 tttggcaaatgggtgcttaatgaaccataacattgattcaagtgtatatgatcataaccttt 47071649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 54859062 - 54859123
Alignment:
Q  64 tttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  54859062 tttggcaaaagggtgcttaatgaaacataacattgattcaagtgtatatgatcataaccttt 54859123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 3409510 - 3409594
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||| ||||||||||||||||||||| | ||||| ||||||||| | ||| |||||||| |||| |||||||||||||    
T  3409510 taatgaaccataacattgattcaagtgtatatgatcataacctttggcaaaggggtgcttaatgaatcatagcattgattcaagt 3409594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 18671132 - 18671048
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||| |||||||||||||||||||||   ||||| ||||| ||||||| | ||||||||||||| |||||||||||||    
T  18671132 taatgaaccataacattgattcaagtgtatatgaagataacctttggtaaaagagggcttaatgaaccatagcattgattcaagt 18671048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 54859079 - 54859163
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||| ||| ||||||||||||||||||||| | ||||| ||||||||| |  || |||||||||||||||||||||||||||    
T  54859079 taatgaaacataacattgattcaagtgtatatgatcataacctttggcaaatggatgcttaatgaaccataacattgattcaagt 54859163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 32429359 - 32429433
Alignment:
Q  151 aacaacacatattttttgacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||| | |||| ||||||||||||||  |||||||| |||||||||| ||||||||||||||||||||||    
T  32429359 aacaacacacaattttggacagaattttgttggattaacaacataattctccctcattctcttactctaaatcat 32429433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 14643630 - 14643687
Alignment:
Q  64 tttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataac 121  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  14643630 tttggcaaaagggtgcttaatgaaccttaacattgattcaagtgtatatgatcataac 14643687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 18737272 - 18737216
Alignment:
Q  169 acagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  18737272 acagaattttgttgcattaacaacataattctccctcattctcttactctaaatcat 18737216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 47071693 - 47071609
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||| ||||||||||||||||||||| | ||||| ||||||||| |  || ||||||||||||  |||||||||||||    
T  47071693 taatgaaccataacattgattcaagtgtatatgatcataacctttggcaaatggatgcttaatgaaccattgcattgattcaagt 47071609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 47071514 - 47071465
Alignment:
Q  173 aattttgttacattaacaatataattctccatcattctcttactctaaat 222  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  47071514 aattttgttacattaacaacataattctccctcattctcttactctaaat 47071465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 18716599 - 18716543
Alignment:
Q  169 acagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||| ||||||||| ||||||||||  |||||||||||||||||||||    
T  18716599 acagaattttgttgcattaacaacataattctcccccattctcttactctaaatcat 18716543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 25618209 - 25618293
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||| ||||||||||||||||||||| | ||||| ||| ||||  |  || |||||||| ||||||||||||||||||    
T  25618209 taatgaaccataacattgattcaagtgtatatgatcataacctttcgcaactggatgcttaatgaatcataacattgattcaagt 25618293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 34279427 - 34279499
Alignment:
Q  34 acattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| ||||||||||| | ||||| ||||| ||||| ||||| ||| |||||||||||||||||||||    
T  34279427 acattgatttaagtgtatatgatcataacctttggtaaaagggtgttcaattaaccataacattgattcaagt 34279499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 18670949 - 18670894
Alignment:
Q  170 cagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  18670949 cagaattatgttgcattaacaacataattctccctcattctcttactctaaatcat 18670894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 34128333 - 34128387
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||| ||||||||  |||||||||| ||||||||||||||||||||||    
T  34128333 agaattttgttgcattaacatcataattctccctcattctcttactctaaatcat 34128387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 35096139 - 35096082
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  35096139 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 35096082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 30019750 - 30019833
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| |  ||||||||||||||| |||| | ||||| ||||||||||  ||| |||||||||||||||| ||||||||||    
T  30019750 taatgaacctttgcattgattcaagtgtgtatgatcataacctttggcaaaaaggtgcttaatgaaccataaca-tgattcaagt 30019833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 32429195 - 32429279
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||| ||| ||||||||||||||||||||| | ||||| |||| |||| | ||| |||||||| |||  |||||||||||||    
T  32429195 taatgaatcataacattgattcaagtgtatatgatcataacctttgacaaaggggtgcttaatgaatcatggcattgattcaagt 32429279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 34279588 - 34279640
Alignment:
Q  172 gaattttgttacattaacaatataattctccatcattctcttactctaaatca 224  Q
    |||||||||||||||||||| |||||||| | || ||||||||||||||||||    
T  34279588 gaattttgttacattaacaacataattcttcctcgttctcttactctaaatca 34279640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 14643826 - 14643880
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||||| ||||| |||||||| | | ||||||||||||||||||||    
T  14643826 agaattttgttacatcaacaacataattcttcctaattctcttactctaaatcat 14643880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 34279355 - 34279400
Alignment:
Q  80 ttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    |||||||||| || |||||||||||||||||||||| |||||||||    
T  34279355 ttaatgaaccttagcattgattcaagtgtatatgattataaccttt 34279400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 54859254 - 54859307
Alignment:
Q  172 gaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||| |||||||||| || ||||||| |||||||||| |||||||||||    
T  54859254 gaattttgtcacattaacaacatgattctccctcattctcttgctctaaatcat 54859307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 18716841 - 18716797
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||    
T  18716841 taatgaaccatgacattgattcaagtgtatatggttataaccttt 18716797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 22119026 - 22118974
Alignment:
Q  64 tttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatc 116  Q
    ||||||||| | ||| |||||||||| || |||||||||||||||||||||||    
T  22119026 tttggcaaatgggtgcttaatgaaccttagcattgattcaagtgtatatgatc 22118974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 25618387 - 25618435
Alignment:
Q  173 aattttgttacattaacaatataattctccatcattctcttactctaaa 221  Q
    ||||||||| ||||||||| |||||||||| ||||||||||| ||||||    
T  25618387 aattttgttgcattaacaaaataattctccctcattctcttattctaaa 25618435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 30019749 - 30019794
Alignment:
Q  80 ttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    |||||||||| |  ||||||||||||||| ||||||||||||||||    
T  30019749 ttaatgaacctttgcattgattcaagtgtgtatgatcataaccttt 30019794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 35091026 - 35090969
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||  ||  ||||| ||| ||||||||||    
T  35091026 gacagaattttgttacattaacaacataattcatcaaaattctattattctaaatcat 35090969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 18737514 - 18737470
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| ||||||||||||||||||||  | |||||||||    
T  18737514 taatgaaccatgacattgattcaagtgtatattgttataaccttt 18737470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 35091217 - 35091173
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  35091217 taatgaaccatgacattgattcaagtatatatggttataaccttt 35091173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 35096330 - 35096286
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  35096330 taatgaaccatgacattgattcaagtatatatggttataaccttt 35096286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 3e-47; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 2023330 - 2023211
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||    
T  2023330 attatttattgatagataatgaaccatgacattgattcaagtgtgtatggttataacctttggcaaaagggtgcttaatgaatcataacattgattcaag 2023231  T
Q  106 tgtatatgatcataaccttt 125  Q
    ||||||||||||||||||||    
T  2023230 tgtatatgatcataaccttt 2023211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 9872311 - 9872410
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  9872311 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 9872409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 9877426 - 9877525
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  9877426 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 9877524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 39904162 - 39904063
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||| |||||||| |||  ||||||||||||    
T  39904162 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaatagtgcttaatgaatcatggcattgattcaag 39904064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 39909275 - 39909176
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  39909275 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 39909177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 2023092 - 2023018
Alignment:
Q  151 aacaacacatattttttgacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||| || |||||||||| ||||||||||    
T  2023092 aacaacacataattttggacagaattttgttacattaacaacataattcttcaccattctcttattctaaatcat 2023018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 2023255 - 2023171
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||| ||| ||||||||||||||||||||| | ||||| |||| |||| | |||||||||||| ||||||||||||||||||    
T  2023255 taatgaatcataacattgattcaagtgtatatgatcataacctttgacaaatgggtgtttaatgaatcataacattgattcaagt 2023171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 35368744 - 35368843
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataac 121  Q
    ||||||||| |  |||||||| ||||||||||| ||||||| |||| ||||   ||| |||||||||| || ||||||||||||||||||||||||||||    
T  35368744 taatgaaccttagcattgatttaagtgtatatgattataacctttgacaaagaggtgcttaatgaaccttagcattgattcaagtgtatatgatcataac 35368843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 35368803 - 35368887
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| |  |||||||||||||||||||| | ||||||||||  ||||  |||||||||||| ||||||||||||||||||    
T  35368803 taatgaaccttagcattgattcaagtgtatatgatcataacatttgataaaaaggtgtttaatgaatcataacattgattcaagt 35368887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 43540857 - 43540909
Alignment:
Q  173 aattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  43540857 aattttgttacattaacaacatagttctccatcattctcttactctaaatcat 43540909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 13556219 - 13556290
Alignment:
Q  35 cattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||||||||||||||||| ||||||| ||||||||||  ||| |||||||| |||| |||||||||||||    
T  13556219 cattgattcaagtgtatatgattataacctttggcaaaaaggtgcttaatgaatcatagcattgattcaagt 13556290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 13556398 - 13556455
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  13556398 gacagaagtttgttacattaacaacataattcttcatcattctcttattctaaatcat 13556455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 43379685 - 43379601
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| |  |||||||||||||||||||| | ||||  ||||| ||||||||| ||| |||| ||||||||||||||||||    
T  43379685 taatgaaccgtagcattgattcaagtgtatatgatcataaactttggtaaaagagtgcttagtgaatcataacattgattcaagt 43379601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 43379732 - 43379641
Alignment:
Q  34 acattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||| ||| ||||||| | ||||| ||||| |||    ||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  43379732 acattgatttaagcgtatatgatcataacttttggtaaagtgatgtttaatgaaccgtagcattgattcaagtgtatatgatcataaacttt 43379641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 43540699 - 43540768
Alignment:
Q  36 attgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||||||||||| | ||||| |||| |||||| ||| |||||||||||||||||||| ||||||    
T  43540699 attgattcaagtgtatatgatcataacctttgacaaaag-gtgcttaatgaaccataacattgactcaagt 43540768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 4555764 - 4555707
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||| ||||||||||||||||||| |||||||| || |||||| ||||||||||||||    
T  4555764 gacacaattttgttacattaacaacataattcttcaccattctattactctaaatcat 4555707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 9877632 - 9877689
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  9877632 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 9877689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 35368727 - 35368788
Alignment:
Q  64 tttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||| ||||| |||||||||| || |||||||| ||||||||||||| |||||||||    
T  35368727 tttggcaaatgagtgcttaatgaaccttagcattgatttaagtgtatatgattataaccttt 35368788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 39903956 - 39903899
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  39903956 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 39903899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 39909069 - 39909012
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  39909069 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 39909012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 9872517 - 9872574
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| ||  ||||| ||| ||||||||||    
T  9872517 gacagaattttgttacattaacaacataattcttcacaattctattattctaaatcat 9872574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 43540668 - 43540729
Alignment:
Q  64 tttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||| | ||| |||||||| | ||  |||||||||||||||||||||||||||||||    
T  43540668 tttggcaaaggggtgcttaatgaatcttagtattgattcaagtgtatatgatcataaccttt 43540729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 35368987 - 35369041
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||| ||| || || |||||||| | ||||||||||||||||||||||    
T  35368987 agaattttgttgcatcaaaaacataattcttcctcattctcttactctaaatcat 35369041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 9872326 - 9872370
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  9872326 taatgaaccatgacattgattcaagtatatatggttataaccttt 9872370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 9877441 - 9877485
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  9877441 taatgaaccatgacattgattcaagtatatatggttataaccttt 9877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 39904147 - 39904103
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  39904147 taatgaaccatgacattgattcaagtatatatggttataaccttt 39904103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 39909260 - 39909216
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  39909260 taatgaaccatgacattgattcaagtatatatggttataaccttt 39909216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 43402012 - 43402056
Alignment:
Q  60 aacatttggcaaaagagtgtttaatgaaccataacattgattcaa 104  Q
    |||||||| |||| |||||||||||||||  ||||||||||||||    
T  43402012 aacatttgacaaatgagtgtttaatgaacgttaacattgattcaa 43402056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 49784863 - 49784744
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| ||||||| ||||||||||||    
T  49784863 attatttattgatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagggtgcataataaaccatatcattgattcaag 49784764  T
Q  106 tgtatatgatcataaccttt 125  Q
    ||||||||||||||| ||||    
T  49784763 tgtatatgatcataagcttt 49784744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 5481375 - 5481474
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| ||| |||||||||||||    
T  5481375 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatgacattgattcaag 5481473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 1302131 - 1302230
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  1302131 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 1302229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 4050125 - 4050026
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  4050125 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 4050027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 4055259 - 4055160
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  4055259 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 4055161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 5457898 - 5457997
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||  |||||||||| ||| |||||||| ||| |||||||||||||    
T  5457898 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacccttggcaaaagggtgcttaatgaatcatgacattgattcaag 5457996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 10672825 - 10672924
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  10672825 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 10672923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 10677938 - 10678037
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  10677938 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 10678036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 31081394 - 31081493
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  31081394 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 31081492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 31076303 - 31076388
Alignment:
Q  21 ataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  |||||||||||||    
T  31076303 ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 31076388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 6852839 - 6852938
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| || ||||| |||  ||||||||||||    
T  6852839 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttgatgaatcatggcattgattcaag 6852937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 6857942 - 6858041
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| || ||||| |||  ||||||||||||    
T  6857942 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttgatgaatcatggcattgattcaag 6858040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 8458629 - 8458530
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || |||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  8458629 attatttattatta-ataatgaaccataacattgattcaagtatatatggttataacctttggcaaaagggtggttaatgaatcatggcattgattcaag 8458531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 8465067 - 8464968
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || |||||||||||||||||||| |||||| |||||||||||||| ||||||||||  ||| |||||||| ||| |||||||||||||    
T  8465067 attatttattatta-ataatgaaccatgacattgactcaagtatatatggttataacctttggcaaaatggtgcttaatgaatcatgacattgattcaag 8464969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 10584745 - 10584844
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||| | |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  10584745 attatttattatta-ataatgaaccatgacattgattcaaatatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 10584843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 10591182 - 10591281
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||| |||||||| |||  ||||||||||||    
T  10591182 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggtaaaagggtgcttaatgaatcatggcattgattcaag 10591280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 33702486 - 33702585
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  33702486 attatttattatta-ataatgaaccatgacattgattcaagtatataaggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 33702584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 29827764 - 29827661
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataac 121  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||| ||||   ||| |||||||||| || ||||||||||||||| |||| ||||||     
T  29827764 taatgaacctttgcattgattcaagtgtatatgattataacatttgacaaattggtgcttaatgaaccttagcattgattcaagtgtgtatggtcataat 29827665  T
Q  122 cttt 125  Q
    ||||    
T  29827664 cttt 29827661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 18024246 - 18024298
Alignment:
Q  173 aattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  18024246 aattttgttacattaacaacataattctccctcattctcttactctaaatcat 18024298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 3187551 - 3187604
Alignment:
Q  172 gaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  3187551 gaattttgtgacattaacaacataattctccctcattctcttactctaaatcat 3187604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 5458105 - 5458162
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  5458105 gacagaattttgttacattaacaacataattcttcatcattctattattctaaatcat 5458162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 5481581 - 5481638
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  5481581 gacagaattttgttacattaacaacataattcttcatcattctattattctaaatcat 5481638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 6853045 - 6853102
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  6853045 gacagaattttgttacattaacaacataattcttcatcattctattattctaaatcat 6853102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 6858148 - 6858205
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  6858148 gacagaattttgttacattaacaacataattcttcatcattctattattctaaatcat 6858205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 8458422 - 8458365
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  8458422 gacagaattttgttacattaacaacataattcttcatcattctattattctaaatcat 8458365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 8464861 - 8464804
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  8464861 gacagaattttgttacattaacaacataattcttcatcattctattattctaaatcat 8464804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 49784789 - 49784704
Alignment:
Q  21 ataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||| ||||||  |||||||||||||||||||| | ||||  ||||||||| | ||| |||||||| ||||||||||||||||||    
T  49784789 ataataaaccatatcattgattcaagtgtatatgatcataagctttggcaaatgggtgcttaatgaatcataacattgattcaagt 49784704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 29827705 - 29827621
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| |  ||||||||||||||| |||||| ||||  ||||||||||  ||| |||||||| ||||||||||||||||||    
T  29827705 taatgaaccttagcattgattcaagtgtgtatggtcataatctttggcaaaatggtgcttaatgaatcataacattgattcaagt 29827621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 49784624 - 49784550
Alignment:
Q  151 aacaacacatattttttgacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||| | |||| |||||||||||||| ||||||||| ||||||| || ||||||| ||||| ||||||||    
T  49784624 aacaacacacaattttggacagaattttgttgcattaacaacataattccccctcattcttttactttaaatcat 49784550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 4049918 - 4049861
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  4049918 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 4049861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 10584951 - 10585008
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||  ||||||||| ||| ||||||||||    
T  10584951 gacagaattttgttacattaacaacataattcctcatcattctattattctaaatcat 10585008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 10591388 - 10591445
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||  ||||||||| ||| ||||||||||    
T  10591388 gacagaattttgttacattaacaacataattcctcatcattctattattctaaatcat 10591445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 10673031 - 10673088
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  10673031 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 10673088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 10678146 - 10678203
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  10678146 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 10678203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 31076495 - 31076552
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  31076495 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 31076552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 31081600 - 31081657
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  31081600 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 31081657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 33702693 - 33702750
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  33702693 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 33702750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 4055049 - 4054995
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  4055049 agaattttgttacattaacaacataattcttcaccattctattattctaaatcat 4054995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 18024091 - 18024133
Alignment:
Q  64 tttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  18024091 tttggcaaaagggtgtttaataaaccataacattgattcaagt 18024133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 29827532 - 29827478
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||| |||||| ||  ||||||||| ||||||||||||||||||||||    
T  29827532 agaattttgttgcattaataacctaattctccctcattctcttactctaaatcat 29827478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 1302338 - 1302395
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||| ||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  1302338 gacaaaattttgttacattaacaacataattcttcaccattctattattctaaatcat 1302395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 20891162 - 20891113
Alignment:
Q  176 tttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||| ||||| |||||||||| |||||| |||||||||||||||    
T  20891162 tttgttacataaacaacataattctccctcattcgcttactctaaatcat 20891113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 33703410 - 33703353
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||| ||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  33703410 gacataattttgttacattaacaacataattcttcaccattctattattctaaatcat 33703353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 8458614 - 8458570
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    |||||||||||||||||||||||||| |||||| | |||||||||    
T  8458614 taatgaaccataacattgattcaagtatatatggttataaccttt 8458570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 20891402 - 20891354
Alignment:
Q  58 ataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||| ||||||||||| ||| ||||||||||||| |||||||||||||    
T  20891402 ataacctttggcaaaagggtgcttaatgaaccatagcattgattcaagt 20891354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 20891466 - 20891425
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagt 47  Q
    |||||||| | |||||||||||||||| ||||||||||||||    
T  20891466 attatttactgatagataatgaaccataacattgattcaagt 20891425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 29827769 - 29827724
Alignment:
Q  76 gtgtttaatgaaccataacattgattcaagtgtatatgatcataac 121  Q
    |||||||||||||| |  |||||||||||||||||||||| |||||    
T  29827769 gtgtttaatgaacctttgcattgattcaagtgtatatgattataac 29827724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 1302146 - 1302190
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  1302146 taatgaaccatgacattgattcaagtatatatggttataaccttt 1302190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 4050110 - 4050066
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  4050110 taatgaaccatgacattgattcaagtatatatggttataaccttt 4050066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 4055244 - 4055200
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  4055244 taatgaaccatgacattgattcaagtatatatggttataaccttt 4055200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 5481390 - 5481434
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  5481390 taatgaaccatgacattgattcaagtatatatggttataaccttt 5481434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 6852854 - 6852898
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  6852854 taatgaaccatgacattgattcaagtatatatggttataaccttt 6852898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 6857957 - 6858001
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  6857957 taatgaaccatgacattgattcaagtatatatggttataaccttt 6858001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 10591197 - 10591241
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  10591197 taatgaaccatgacattgattcaagtatatatggttataaccttt 10591241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 10672840 - 10672884
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  10672840 taatgaaccatgacattgattcaagtatatatggttataaccttt 10672884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 10677953 - 10677997
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  10677953 taatgaaccatgacattgattcaagtatatatggttataaccttt 10677997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 31076304 - 31076348
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  31076304 taatgaaccatgacattgattcaagtatatatggttataaccttt 31076348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 31081409 - 31081453
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  31081409 taatgaaccatgacattgattcaagtatatatggttataaccttt 31081453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 8e-45; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 43359119 - 43359001
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    |||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  43359119 attatttattgattgataatgaaccatgatattgattcaagtgtatatggttataacatttggcaaaagggtg-ctaatgaaccataacattgattcaag 43359021  T
Q  106 tgtatatgatcataaccttt 125  Q
    ||||||||||||||||||||    
T  43359020 tgtatatgatcataaccttt 43359001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 3468385 - 3468286
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| ||| |||||||||||||    
T  3468385 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatgacattgattcaag 3468287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 10186437 - 10186527
Alignment:
Q  35 cattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    |||||||| |||| ||||||||| |||| ||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  10186437 cattgattgaagtttatatggttgtaacttttggcaaaagggtgcttaatgaaccatagcattgattcaagtgtatatgatcataaccttt 10186527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 10185976 - 10185891
Alignment:
Q  37 ttgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataacc 122  Q
    |||||||||||||||||||||||||| ||||||||||  ||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  10185976 ttgattcaagtgtatatggttataacctttggcaaaaaggtgcttaatgaaccatatcattgattcaagtatatatgatcataacc 10185891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 28574614 - 28574515
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  28574614 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 28574516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 28598626 - 28598527
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  28598626 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 28598528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 10186661 - 10186729
Alignment:
Q  157 acatattttttgacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10186661 acataattttggacagaattttgttacattaacaacataattctccatcattctcttactctaaatcat 10186729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 16051487 - 16051403
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||||||||  |||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||| |||||||||||||    
T  16051487 taatgaaccatagcattgattcaagtgtatatgatcataacatttggcaaatgagtgcttaatgaaccatatcattgattcaagt 16051403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 21431537 - 21431627
Alignment:
Q  35 cattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    |||||||||||||||||||  ||||||| ||||||||| | ||| || ||||||| |||||||||||||||||| ||||||||||||||||    
T  21431537 cattgattcaagtgtatataattataacctttggcaaatgggtgcttgatgaaccttaacattgattcaagtgtgtatgatcataaccttt 21431627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 19310974 - 19310878
Alignment:
Q  126 atttgggcattaatttggacagaaaaacaacacatattttttgacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||||||| ||| |||| |||||  || |||| |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  19310974 atttgggcattaatttg-acacaaaagcaaca--taattttggacagagttttgttacattaacaatataattctccctcattctcttactataaatcat 19310878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 43359045 - 43358961
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||| ||||||||||||||||||||| | ||||| ||||||||| | ||| |||||||| |||| |||||||||||||    
T  43359045 taatgaaccataacattgattcaagtgtatatgatcataacctttggcaaaggggtgcttaatgaatcatagcattgattcaagt 43358961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 35626281 - 35626226
Alignment:
Q  170 cagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  35626281 cagaattttgttacattaacaacataattctccctcattctcttactctaaatcat 35626226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 21431585 - 21431667
Alignment:
Q  24 atgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||| | |||||||||||||||| |||| | ||||| ||||||||||| ||| |||||||||||||||||||||| ||||    
T  21431585 atgaaccttaacattgattcaagtgtgtatgatcataacctttggcaaaagggtgcttaatgaaccataacattgatttaagt 21431667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 43358880 - 43358810
Alignment:
Q  152 acaacacatattttttgacagaattttgttacattaacaatataattctccatcattctcttactctaaat 222  Q
    |||||||| | |||| ||| |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  43358880 acaacacacaattttggactgaattttgttacattaacaacataattctccctcattctcttactctaaat 43358810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 17414633 - 17414686
Alignment:
Q  172 gaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  17414633 gaattttgttacattaacaacataattctccctcattctcttactctaaatcat 17414686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 19311116 - 19311031
Alignment:
Q  21 ataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||||||| |  |||||||||||||||||||| | ||||| ||||| ||||| ||| ||||||||| |||||||||||||||||    
T  19311116 ataatgaaccttagcattgattcaagtgtatatgatcataacctttggtaaaagggtgcttaatgaactataacattgattcaagt 19311031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 1188113 - 1188029
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| |  ||||||| |||||||||||| | ||||| ||||||||| | |||||||||||||||||||||| ||||||||    
T  1188113 taatgaaccttagcattgatacaagtgtatatgatcataacctttggcaaatgggtgtttaatgaaccataacattaattcaagt 1188029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 1188134 - 1188069
Alignment:
Q  60 aacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    |||||||||||||||  || |||||||||| || ||||||| ||||||||||||||||||||||||    
T  1188134 aacatttggcaaaaggatgattaatgaaccttagcattgatacaagtgtatatgatcataaccttt 1188069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 3701351 - 3701451
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||| || | | ||| ||||| |||    || |||||||||||||| |||||||||||    
T  3701351 attatttactaatagataatgaaccatagcattgattcaagtgtatctgatcacaacctttggtaaattgatgcttaatgaaccataatattgattcaag 3701450  T
Q  106 t 106  Q
    |    
T  3701451 t 3701451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 10186483 - 10186567
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||||||||  |||||||||||||||||||| | ||||| |||| |||| | ||| ||||||||||||| ||||| |||||||    
T  10186483 taatgaaccatagcattgattcaagtgtatatgatcataacctttgacaaaggggtgcttaatgaaccatagcattggttcaagt 10186567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 35626465 - 35626382
Alignment:
Q  37 ttgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataac 121  Q
    |||||||||||||||||| ||||||| |||| |||||| || ||||||||||| || |||||||||||| || ||| ||||||||    
T  35626465 ttgattcaagtgtatatgattataacctttgacaaaag-gtatttaatgaaccttagcattgattcaagagtgtataatcataac 35626382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 44524116 - 44524172
Alignment:
Q  169 acagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  44524116 acagaatattgttgcattaacaacataattctccatcattctcttactttaaatcat 44524172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 1187935 - 1187882
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  1187935 agaattttgttacattaacaacataaatctcc-tcattctcttactctaaatcat 1187882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 21431768 - 21431822
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||    
T  21431768 agaattttgttgcattaacaacataattctccctcattctcttaatctaaatcat 21431822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 1188289 - 1188224
Alignment:
Q  60 aacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    |||||||||||||||  || |||||||| | |||||||||| ||||||||||| ||||||||||||    
T  1188289 aacatttggcaaaaggatgcttaatgaatcttaacattgatacaagtgtatattatcataaccttt 1188224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 3465584 - 3465527
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  3465584 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 3465527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 3468178 - 3468121
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  3468178 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 3468121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 16051488 - 16051447
Alignment:
Q  80 ttaatgaaccataacattgattcaagtgtatatgatcataac 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  16051488 ttaatgaaccatagcattgattcaagtgtatatgatcataac 16051447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 19311132 - 19311071
Alignment:
Q  64 tttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||| | |||  ||||||||| || ||||||||||||||||||||||||||||||||    
T  19311132 tttggcaaaggggtgcataatgaaccttagcattgattcaagtgtatatgatcataaccttt 19311071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 28574408 - 28574351
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  28574408 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 28574351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 28598420 - 28598363
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  28598420 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 28598363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 35653172 - 35653237
Alignment:
Q  39 gattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaa 104  Q
    |||||||||||||||| | ||||| |||| |||| ||||| ||||||||||||| |||||||||||    
T  35653172 gattcaagtgtatatgatcataacctttgacaaaggagtgcttaatgaaccatatcattgattcaa 35653237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 35626422 - 35626338
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| |  |||||||||||| || |||  | ||||| ||||||||||| ||||| ||||||||||||||||||| |||||    
T  35626422 taatgaaccttagcattgattcaagagtgtataatcataacttttggcaaaagggtgttaaatgaaccataacattgatgcaagt 35626338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 13654598 - 13654527
Alignment:
Q  35 cattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||| |||||||| |||| | |||||  |||||||||| ||  |||||||||||||||||||||||||||    
T  13654598 cattgactcaagtgtgtatgatcataacccttggcaaaagggtacttaatgaaccataacattgattcaagt 13654527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 3701367 - 3701411
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    |||||||||||| ||||||||||||||||| |||||| |||||||    
T  3701367 taatgaaccatagcattgattcaagtgtatctgatcacaaccttt 3701411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 13654445 - 13654398
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactct 218  Q
    ||||||||||| ||||||||| |||||||||| |||||||||| ||||    
T  13654445 agaattttgttgcattaacaacataattctccctcattctcttgctct 13654398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 17414409 - 17414450
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagt 47  Q
    |||||||| ||||||||||||||||||  |||||||||||||    
T  17414409 attatttactaatagataatgaaccatagcattgattcaagt 17414450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 3468370 - 3468326
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  3468370 taatgaaccatgacattgattcaagtatatatggttataaccttt 3468326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 3696233 - 3696277
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||||| |||||||||||| |||||  |||||||||||    
T  3696233 taatgaaccataatattgattcaagtttatatagtcataaccttt 3696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 28574599 - 28574555
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  28574599 taatgaaccatgacattgattcaagtatatatggttataaccttt 28574555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 28598611 - 28598567
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  28598611 taatgaaccatgacattgattcaagtatatatggttataaccttt 28598567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 4e-31; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 10340804 - 10340913
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||          |||||||| |||||||||||||||||    
T  10340804 attatttattgatagataatgaaccatgacattgattcaagtgtgtatggttataacctttggc----------ttaatgaatcataacattgattcaag 10340893  T
Q  106 tgtatatgatcataaccttt 125  Q
    ||||||||||||||||||||    
T  10340894 tgtatatgatcataaccttt 10340913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 18494064 - 18494163
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| ||| |||||||||||||    
T  18494064 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatgacattgattcaag 18494162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 34108548 - 34108449
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| ||| |||||||||||||    
T  34108548 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatgacattgattcaag 34108450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 14314798 - 14314897
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  14314798 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 14314896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 14318502 - 14318601
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  14318502 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 14318600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 26986876 - 26986975
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  26986876 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 26986974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 26981762 - 26981861
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  26981762 attatttattatta-ataatgaaccatgacattgattcaagtatatacggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 26981860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 25953215 - 25953309
Alignment:
Q  131 ggcattaatttggacagaaaaacaaca-catattttttgacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||| || || |||| || | |||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  25953215 ggcattaatttggaca-aacaataacaacacaattttggacagaattttgttacattaacaacataattctccatcattctcatactctaaatcat 25953309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 1782117 - 1782036
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||| |||||||||||||||||||||   ||||||||| | ||| | ||| |||||||||||||||||||||||||||    
T  1782117 taatgaaccataacattgattcaagtgtatatg---ataacatttagaaaatgcgtgcttaatgaaccataacattgattcaagt 1782036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 10341045 - 10341107
Alignment:
Q  163 tttttgacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||| |||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  10341045 ttttggacagaattttgttgcattaacaacataattctccctcattctcttactctaaatcat 10341107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 18608554 - 18608636
Alignment:
Q  24 atgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||||||  || ||||||||||||||||| | ||||| ||||||||| | ||| |||||||||||||||||||||||||||    
T  18608554 atgaaccatagcagtgattcaagtgtatatgttcataacctttggcaaaggggtgcttaatgaaccataacattgattcaagt 18608636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 18608724 - 18608778
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  18608724 agaattttgttacattaacaacataattctccctcattctcttactctaaatcat 18608778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 10340869 - 10340953
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||| ||| ||||||||||||||||||||| | ||||| |||| |||||| ||| |||||||| |||| |||||||||||||    
T  10340869 taatgaatcataacattgattcaagtgtatatgatcataacctttgacaaaagggtgcttaatgaatcatagcattgattcaagt 10340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 34108340 - 34108283
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  34108340 gacagaattttgttacattaacaacataattcttcatcattctattattctaaatcat 34108283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 43956764 - 43956836
Alignment:
Q  34 acattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||||||||| |||||||| ||||||| ||||||||||  ||| |||||||| |||| |||||||||||||    
T  43956764 acattgattcaaatgtatatgattataacctttggcaaaaaggtgcttaatgaatcatagcattgattcaagt 43956836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 1782134 - 1782083
Alignment:
Q  64 tttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgat 115  Q
    |||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  1782134 tttggcaaatcagtgattaatgaaccataacattgattcaagtgtatatgat 1782083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 25953017 - 25953116
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataac 121  Q
    ||||||||| |  |||||||||||||||||||  | || |  ||||||||  ||||| || ||||||| ||| |||||||||||||||||||||||||||    
T  25953017 taatgaacccttgcattgattcaagtgtatattatcatgagctttggcaattgagtgcttgatgaaccttaatattgattcaagtgtatatgatcataac 25953116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 14315004 - 14315061
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  14315004 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 14315061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 14318708 - 14318765
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  14318708 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 14318765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 26981969 - 26982026
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  26981969 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 26982026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 26987082 - 26987139
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  26987082 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 26987139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 43956942 - 43956999
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||| ||||||||| ||||||||| |||||||| ||||||||||||| ||||||||||    
T  43956942 gacataattttgttgcattaacaacataattcttcatcattctcttattctaaatcat 43956999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 25953090 - 25953161
Alignment:
Q  36 attgattcaagtgtatatggttataaca-tttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||||||||||| | |||||| |||||||||||  || |||||||||||||| ||||||| ||||    
T  25953090 attgattcaagtgtatatgatcataacattttggcaaaaggatgcttaatgaaccataaaattgatttaagt 25953161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 18494272 - 18494326
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  18494272 agaattttgttacattaacaacataattcttcaccattctattattctaaatcat 18494326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 18608535 - 18608596
Alignment:
Q  64 tttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||| | ||| || |||||||||| || ||||||||||||||||| |||||||||||    
T  18608535 tttggcaaaggggtgcttgatgaaccatagcagtgattcaagtgtatatgttcataaccttt 18608596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 1781939 - 1781893
Alignment:
Q  179 gttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||| |||||| ||| |||||||||||||| |||||||    
T  1781939 gttacattaacaacataattatccctcattctcttactcaaaatcat 1781893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 14314813 - 14314857
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  14314813 taatgaaccatgacattgattcaagtatatatggttataaccttt 14314857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 14318517 - 14318561
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  14318517 taatgaaccatgacattgattcaagtatatatggttataaccttt 14318561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 18494079 - 18494123
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  18494079 taatgaaccatgacattgattcaagtatatatggttataaccttt 18494123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 26986891 - 26986935
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  26986891 taatgaaccatgacattgattcaagtatatatggttataaccttt 26986935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 34108533 - 34108489
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  34108533 taatgaaccatgacattgattcaagtatatatggttataaccttt 34108489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 12851993 - 12851894
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| ||| |||||||||||||    
T  12851993 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatgacattgattcaag 12851895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 12857106 - 12857007
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  12857106 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 12857008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 14610646 - 14610547
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  14610646 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 14610548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 26051338 - 26051239
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  26051338 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 26051240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 26056451 - 26056352
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  26056451 attatttattatt-gataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 26056353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 26060697 - 26060598
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  26060697 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 26060599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 26065810 - 26065711
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  26065810 attatttattatt-gataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 26065712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 14610475 - 14610418
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  14610475 gacagaattttgttacattaacaacataattcttcatcattctcttattctaaatcat 14610418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 5440217 - 5440286
Alignment:
Q  37 ttgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||| ||||||||||||| ||||| ||||| ||| | ||| |||||||||||||||||||||||||||    
T  5440217 ttgatttaagtgtatatggtcataacttttgggaaaggggtgattaatgaaccataacattgattcaagt 5440286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 5449227 - 5449296
Alignment:
Q  37 ttgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||| ||||||||||||| ||||| ||||| ||| | ||| |||||||||||||||||||||||||||    
T  5449227 ttgatttaagtgtatatggtcataacttttgggaaaggggtgattaatgaaccataacattgattcaagt 5449296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 4181478 - 4181532
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||    
T  4181478 agaattttgttgcattaacaacataattctccctcattctcttaatctaaatcat 4181532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 35352220 - 35352266
Alignment:
Q  79 tttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  35352220 tttaatgaatcataacattgattcaagtgtatataatcataaccttt 35352266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 12851785 - 12851728
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||| ||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  12851785 gacaaaattttgttacattaacaacataattcttcatcattctattattctaaatcat 12851728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 12856900 - 12856843
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  12856900 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 12856843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 26051132 - 26051075
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  26051132 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 26051075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 26056245 - 26056188
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  26056245 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 26056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 26060491 - 26060434
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  26060491 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 26060434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 26065604 - 26065547
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  26065604 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 26065547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 5440388 - 5440438
Alignment:
Q  175 ttttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||| |||||||||||| |||||||||| |||||| |||||||||||||||    
T  5440388 ttttattacattaacaacataattctccctcattcccttactctaaatcat 5440438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 5449398 - 5449448
Alignment:
Q  175 ttttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||| |||||||||||| |||||||||| |||||| |||||||||||||||    
T  5449398 ttttattacattaacaacataattctccctcattcccttactctaaatcat 5449448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 37459938 - 37459991
Alignment:
Q  172 gaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||| |||||||| ||||| ||||||||||  |||||||||||||||||||||    
T  37459938 gaattatgttacatgaacaacataattctcccacattctcttactctaaatcat 37459991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 37459802 - 37459839
Alignment:
Q  59 taacatttggcaaaagagtgtttaatgaaccataacat 96  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  37459802 taacctttggcaaatgagtgtttaatgaaccataacat 37459839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 12851978 - 12851934
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  12851978 taatgaaccatgacattgattcaagtatatatggttataaccttt 12851934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 12857091 - 12857047
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  12857091 taatgaaccatgacattgattcaagtatatatggttataaccttt 12857047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 14610631 - 14610587
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  14610631 taatgaaccatgacattgattcaagtatatatggttataaccttt 14610587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 26051323 - 26051279
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  26051323 taatgaaccatgacattgattcaagtatatatggttataaccttt 26051279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 26056436 - 26056392
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  26056436 taatgaaccatgacattgattcaagtatatatggttataaccttt 26056392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 26060682 - 26060638
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  26060682 taatgaaccatgacattgattcaagtatatatggttataaccttt 26060638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 26065795 - 26065751
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  26065795 taatgaaccatgacattgattcaagtatatatggttataaccttt 26065751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 45120704 - 45120605
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| ||| |||||||||||||    
T  45120704 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatgacattgattcaag 45120606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 20892207 - 20892292
Alignment:
Q  36 attgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataac 121  Q
    ||||||||||||||||||| | || |||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20892207 attgattcaagtgtatatgatcatgacatttggcaagtgagtgattaatgaaccataacattgattcaagtgtatatgatcataac 20892292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 14917269 - 14917368
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  14917269 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 14917367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 30283337 - 30283436
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| | |||| ||||||||||||||||||||||| |||||||||||||  ||||||||||| ||| |||||||||||||| |||||||||||    
T  30283337 attatttattatt-gatactgaaccatgacattgattcaagtatatatggttataatctttggcaaaagggtgcttaatgaaccataatattgattcaag 30283435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 17720413 - 17720512
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || |||||||||||||||||||||| |||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  17720413 attatttattatta-ataatgaaccatgacattgattgaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 17720511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 30283534 - 30283591
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  30283534 gacagaattttgttacattaacaacataattctccatccttctcttactctaaatcat 30283591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 39178916 - 39178849
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaag 74  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  39178916 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaag 39178849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 42780475 - 42780391
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||| ||||||||||||||||||||| | ||||| ||||||||| |   | |||||||||||||||||||||||||||    
T  42780475 taatgaaccataacattgattcaagtgtatatgatcataacctttggcaaatggtggcttaatgaaccataacattgattcaagt 42780391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 716602 - 716512
Alignment:
Q  35 cattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    |||||||||||||||||||| ||||||| ||||| ||| | ||| |||||||| | || |||||||||||| || ||||||||||||||||    
T  716602 cattgattcaagtgtatatgattataacctttggtaaaggggtgcttaatgaagcttagcattgattcaagagtgtatgatcataaccttt 716512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 20892252 - 20892333
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaa 104  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||| |||||  ||| ||||||||||| |||||||||||||    
T  20892252 taatgaaccataacattgattcaagtgtatatgatcataacatttgccaaaaaggtgcttaatgaacca-aacattgattcaa 20892333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 42780476 - 42780431
Alignment:
Q  80 ttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  42780476 ttaatgaaccataacattgattcaagtgtatatgatcataaccttt 42780431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 16284546 - 16284496
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaa 221  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  16284546 agaattttgttgcattaacaatataattctccctcattctcttactctaaa 16284496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 14917475 - 14917532
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  14917475 gacagaattttgttacattaacaacataattcttcatcattctattattctaaatcat 14917532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 45120497 - 45120440
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  45120497 gacagaattttgttacattaacaacataattcttcatcattctattattctaaatcat 45120440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 42780311 - 42780238
Alignment:
Q  151 aacaacacatattttttgacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||| | |||| |||||||||||||||||||| | | |||||||| || |||||||||||||||||||||    
T  42780311 aacaacacacaattttggacagaattttgttacatta-ctacataattcttcaccattctcttactctaaatcat 42780238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 17720619 - 17720676
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  17720619 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 17720676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 716543 - 716472
Alignment:
Q  35 cattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||||||||| || |||| | ||||| ||||||||||  |||||||||| ||| ||||||||||||||||    
T  716543 cattgattcaagagtgtatgatcataacctttggcaaaaaggtgtttaatggaccgtaacattgattcaagt 716472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 716375 - 716321
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||| | | ||||||| |||||||||| ||||||||||||||||||||||    
T  716375 agaattttgcttctttaacaacataattctccttcattctcttactctaaatcat 716321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 17720086 - 17720135
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggt 56  Q
    ||||||||||| || ||||||||||||||||||||||||||| ||||||||    
T  17720086 attatttattatta-ataatgaaccatgacattgattcaagtatatatggt 17720135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 716620 - 716571
Alignment:
Q  76 gtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||| |||| |  |||||||||||||||||||||| |||||||||    
T  716620 gtgtttaataaacctttgcattgattcaagtgtatatgattataaccttt 716571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 14917284 - 14917328
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  14917284 taatgaaccatgacattgattcaagtatatatggttataaccttt 14917328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 39178901 - 39178857
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  39178901 taatgaaccatgacattgattcaagtatatatggttataaccttt 39178857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 45120689 - 45120645
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  45120689 taatgaaccatgacattgattcaagtatatatggttataaccttt 45120645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 21276090 - 21275991
Alignment:
Q  6 attatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaag 105  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  ||||||||||||    
T  21276090 attatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaag 21275992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 21937855 - 21937784
Alignment:
Q  35 cattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||||||||||||||||| | ||||| ||||||||||| |||||||||||||||| ||||||||||||||    
T  21937855 cattgattcaagtgtatatgatcataacctttggcaaaagggtgtttaatgaaccatcacattgattcaagt 21937784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 20751994 - 20752084
Alignment:
Q  35 cattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||| |||||||||||||  ||||||| |||| |||| | |||||||||||||| || ||||||||||||||||||||  ||||||||||    
T  20751994 cattggttcaagtgtatattattataacctttgacaaaggggtgtttaatgaaccttagcattgattcaagtgtatatggccataaccttt 20752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 21936756 - 21936830
Alignment:
Q  151 aacaacacatattttttgacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||| | |||| ||| ||| |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  21936756 aacaacacacaattttggactgaactttgttacattaacaacataattctccatcattctcatactctaaatcat 21936830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 21937914 - 21937824
Alignment:
Q  35 cattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    |||||||||||||||||||| | || || ||||| ||| | ||||||||| |||  || ||||||||||||||||||||||||||||||||    
T  21937914 cattgattcaagtgtatatgatcatgacctttggaaaaggggtgtttaattaactttatcattgattcaagtgtatatgatcataaccttt 21937824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 24508716 - 24508806
Alignment:
Q  35 cattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    |||||||||||||||||||| | || || ||||| ||| | |||||||||||||| || |||| ||||||||||||| |||||||||||||    
T  24508716 cattgattcaagtgtatatgatcatgacctttggtaaaggggtgtttaatgaaccttagcattaattcaagtgtataagatcataaccttt 24508806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 24510005 - 24509918
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttat---aacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| | ||||| ||||||||||||||| | ||   |||||||| |||||| |||||||||||||||||||||||||||||||    
T  24510005 taatgaaccttaacattaattcaagtgtatatgatgatcataacatttgacaaaagtgtgtttaatgaaccataacattgattcaagt 24509918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 20752040 - 20752124
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| |  |||||||||||||||||||||  ||||| |||| |||||  ||| |||||||||||||||||||||||||||    
T  20752040 taatgaaccttagcattgattcaagtgtatatggccataacctttgacaaaatggtgcttaatgaaccataacattgattcaagt 20752124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 24508762 - 24508846
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| |  |||| ||||||||||||| | | ||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  24508762 taatgaaccttagcattaattcaagtgtataagatcataacctttggcaaaagggtgcttaatgaaccataacattgattcaagt 24508846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 21936529 - 21936632
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataac 121  Q
    ||||||||| |  ||||||||||||| |||||| | || || ||||||||| | ||||||| |||||| ||  ||| |||||||||||||||||||||||    
T  21936529 taatgaacctttgcattgattcaagtttatatgatcatgacctttggcaaaggggtgtttagtgaaccttagaatttattcaagtgtatatgatcataac 21936628  T
Q  122 cttt 125  Q
    ||||    
T  21936629 cttt 21936632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 24508926 - 24508978
Alignment:
Q  173 aattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  24508926 aattatgttacattaacaacataattctccatcattcttttactctaaatcat 24508978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 21936606 - 21936672
Alignment:
Q  40 attcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||||||||| | ||||| ||||||||||  ||| ||||| |||||||||||||||||||||    
T  21936606 attcaagtgtatatgatcataacctttggcaaaaaggtgcttaataaaccataacattgattcaagt 21936672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 11183068 - 11183133
Alignment:
Q  60 aacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||||| | ||  |||||||||| || | ||||||||||||||||||||||||||||||    
T  11183068 aacatttggcaaaggggtacttaatgaaccttagccttgattcaagtgtatatgatcataaccttt 11183133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 11183104 - 11183173
Alignment:
Q  37 ttgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||||||||||||||| | ||||| |||| |||| |  ||||||||||||||||||| ||||||||||    
T  11183104 ttgattcaagtgtatatgatcataacctttgacaaagggatgtttaatgaaccataacactgattcaagt 11183173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 21275884 - 21275827
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||||||||||||||||||||||| |||||||| || |||||| ||| ||||||||||    
T  21275884 gacagaattttgttacattaacaacataattcttcaccattctattattctaaatcat 21275827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 2887596 - 2887544
Alignment:
Q  173 aattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||    
T  2887596 aattttgttccattaccaacataattctccctcattctcttactctaaatcat 2887544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 2889318 - 2889266
Alignment:
Q  173 aattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||    
T  2889318 aattttgttccattaccaacataattctccctcattctcttactctaaatcat 2889266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 24509809 - 24509757
Alignment:
Q  173 aattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    |||| |||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  24509809 aattatgttacattaacaacataattctccatcattcttttactttaaatcat 24509757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 20752214 - 20752268
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||||||||||| |||||||| || |||||||||||| ||| ||||    
T  20752214 agaattttgttacattaacaacataattcttcaccattctcttactataagtcat 20752268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 11183263 - 11183316
Alignment:
Q  172 gaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||| ||| || |||||||||  ||||||||||||||||||||||    
T  11183263 gaattttgttacaataataacataattctctctcattctcttactctaaatcat 11183316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 21937697 - 21937628
Alignment:
Q  151 aacaacacatattttttgacagaattttgttacattaacaatataattctccatcattctcttactctaaa 221  Q
    ||||||||| | |||| |||| |||||||| |||||||||| |||||| ||||||| ||||||| ||||||    
T  21937697 aacaacacacaattttggacataattttgt-acattaacaacataattttccatcactctcttattctaaa 21937628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 21936512 - 21936573
Alignment:
Q  64 tttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||| | ||| |||||||||| |  ||||||||||||| ||||||||||| ||||||    
T  21936512 tttggcaaatgggtgcttaatgaacctttgcattgattcaagtttatatgatcatgaccttt 21936573  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 21937948 - 21937883
Alignment:
Q  60 aacatttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||| ||||| | ||| |||||||||  |  ||||||||||||||||||||||||| ||||||    
T  21937948 aacatttagcaaaggggtggttaatgaacatttgcattgattcaagtgtatatgatcatgaccttt 21937883  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 21276075 - 21276031
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  21276075 taatgaaccatgacattgattcaagtatatatggttataaccttt 21276031  T

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Target: scaffold0223 (Bit Score: 59; Significance: 4e-25; HSPs: 3)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 1908 - 2005
Alignment:
Q  8 tatttattaatagataatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||| |||  |||||||||||||    
T  1908 tatttattatta-ataatgaaccatgacattgattcaagtatatatggttataacctttggcaaaagggtgcttaatgaatcatggcattgattcaagt 2005  T

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Target: scaffold0223; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 2112 - 2169
Alignment:
Q  168 gacagaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  2112 gacagaattttattacattaacaacataattcttcatcattctattattctaaatcat 2169  T

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Target: scaffold0223; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 1921 - 1965
Alignment:
Q  81 taatgaaccataacattgattcaagtgtatatgatcataaccttt 125  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||    
T  1921 taatgaaccatgacattgattcaagtatatatggttataaccttt 1965  T

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Target: scaffold0005 (Bit Score: 53; Significance: 1e-21; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 173645 - 173561
Alignment:
Q  22 taatgaaccatgacattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    ||||||||| | ||||||||||||||||||||| | |||||||||| |||| |||||||||||||||| || |||||||||||||    
T  173645 taatgaaccttaacattgattcaagtgtatatgatcataacatttgacaaaggagtgtttaatgaaccttagcattgattcaagt 173561  T

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Target: scaffold0005; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 173662 - 173605
Alignment:
Q  64 tttggcaaaagagtgtttaatgaaccataacattgattcaagtgtatatgatcataac 121  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  173662 tttggcaaaagggtgcttaatgaaccttaacattgattcaagtgtatatgatcataac 173605  T

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Target: scaffold0005; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 173466 - 173412
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactctaaatcat 225  Q
    ||||||||||||||| ||||| |||||||| | | ||||||||||||||||||||    
T  173466 agaattttgttacatcaacaacataattcttcctaattctcttactctaaatcat 173412  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 144359 - 144288
Alignment:
Q  35 cattgattcaagtgtatatggttataacatttggcaaaagagtgtttaatgaaccataacattgattcaagt 106  Q
    |||||| |||||||| |||| | |||||  |||||||||| ||  |||||||||||||||||||||||||||    
T  144359 cattgactcaagtgtgtatgatcataacccttggcaaaagggtacttaatgaaccataacattgattcaagt 144288  T

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Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 144206 - 144159
Alignment:
Q  171 agaattttgttacattaacaatataattctccatcattctcttactct 218  Q
    ||||||||||| ||||||||| |||||||||| |||||||||| ||||    
T  144206 agaattttgttgcattaacaacataattctccctcattctcttgctct 144159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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