View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11788_low_9 (Length: 683)
Name: NF11788_low_9
Description: NF11788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11788_low_9 |
 | |
|
| [»] scaffold0031 (1 HSPs) |
| | |
|
| [»] scaffold0490 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 580; Significance: 0; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 580; E-Value: 0
Query Start/End: Original strand, 24 - 667
Target Start/End: Complemental strand, 7433424 - 7432781
Alignment:
| Q |
24 |
tgcatgtgtacgcttgattgggtttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaacaaagtga |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||| |
|
|
| T |
7433424 |
tgcatgtgtacgcttgattgggtttcaccacttgtgcgattatggatcaaggcttttacagtgggacaggaagtcttcaaagtcgcgtcaagcaaagtga |
7433325 |
T |
|
| Q |
124 |
ccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgttgttgacttctacat |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||||| |||||| | |
|
|
| T |
7433324 |
tcaaatatgagaaaatgtgttcataaaatcaacgtatttttataccatttgcatttgacacacttaacttcatagcaccagaggttgttgatttctacgt |
7433225 |
T |
|
| Q |
224 |
aaagttcaaagggttgtccatatcaatctaatatatctcctatgtgcatagatattatgttcatatgaaaaagagaattctttatcaataaaagtcgagt |
323 |
Q |
| |
|
|||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7433224 |
aaagttgaacgggtaatccatatcaatctaatatatctcctatgtgcatagatattatgttcatatgaaaaagagaattctttatcaataaaagtcgagt |
7433125 |
T |
|
| Q |
324 |
taaaatagagggagtgcaattaatcaaattaaaaagcttcacatatattttgtaattttctttgtattgaagaaagaaagggaaaaggtaagaaaagacg |
423 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7433124 |
taaaatagagggagtgcaattaatcaaattaaaaagcttcacatatattttgtcattttctttgtattgaagaaagaaagggaaaaggtaagaaaagacg |
7433025 |
T |
|
| Q |
424 |
ttgggtacgtaaagtatatgtgctaccttggttgagacatgatgacaagttatcggctgagaggccaactatccacttaaaaagaaacctataatctaat |
523 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7433024 |
ttgggtacgtaaagtatatgtgctaccttggttgagacatgatgacaagttatcggctgagaggccaactatccacttaaaaagaaacctataatctaat |
7432925 |
T |
|
| Q |
524 |
ctaataatctcgttggtctataactctattaaatctaaattcttatctaccatcatttcactcacatgctcatccatttcaacccaattctcttagcact |
623 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7432924 |
ctaataatctcgttggtctataactctattaaatctaaattcttatctaccatcatttcactcacatgctcatccatttcaacccaattctcttagcact |
7432825 |
T |
|
| Q |
624 |
ataactgtatcaatattcaatattgggaccatctcatcacaaac |
667 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7432824 |
ataactgtatcaatattcaatattgggaccatctcatcacaaac |
7432781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 34644775 - 34644540
Alignment:
| Q |
17 |
gaaaacatgcatgtgtacgcttgattggg-tttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaa |
115 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||||||||||||| | ||| || || ||||||||| || | ||| | | ||| ||||| |||||||| |
|
|
| T |
34644775 |
gaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggtttaggggtcggggcttttacggtaggacaagcaaccctaaaagttgcgtcaaa |
34644676 |
T |
|
| Q |
116 |
caaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgttgttga- |
214 |
Q |
| |
|
||||||| ||||| |||||||| |||||| | || | || || |||||||||||||| ||||| || | |||| ||||| |||| |||||||| |
|
|
| T |
34644675 |
caaagtggccaaacatgagaaagcgtgttctgacaacctacatgcttttataccatttgtttttgacactttcggcttcctagcatcagaggttgttgac |
34644576 |
T |
|
| Q |
215 |
cttctacataaagttcaaagggttgtccatatcaat |
250 |
Q |
| |
|
|||||||||| ||| ||||||||| | ||||||||| |
|
|
| T |
34644575 |
cttctacatagagtccaaagggttatgcatatcaat |
34644540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 28041116 - 28041190
Alignment:
| Q |
107 |
cgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttga |
181 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||||||| | ||||||| ||||||||||||||||| ||||| |
|
|
| T |
28041116 |
cgcgtcaaacaaagtggccaaacatgagaaagtgtgttctgacaatcaacaggtttttataccatttgcttttga |
28041190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 238
Target Start/End: Complemental strand, 2764609 - 2764465
Alignment:
| Q |
95 |
agtcctcaaagtcgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttc |
194 |
Q |
| |
|
|||||| ||||| | |||| |||||||| |||| ||||||||| |||||| | ||||||| || |||||| |||||| | ||||| || | | |||| |
|
|
| T |
2764609 |
agtcctaaaagttgtgtcagacaaagtggtcaaacatgagaaaacgtgttccgacaatcaacatgcttttatgccattttcttttgacactttcagcttc |
2764510 |
T |
|
| Q |
195 |
gtagcaccagatgttgttgac-ttctacataaagttcaaagggtt |
238 |
Q |
| |
|
||||| |||| ||||||||| ||||||||||||| ||||||||| |
|
|
| T |
2764509 |
ctagcatcagaggttgttgaccttctacataaagtccaaagggtt |
2764465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 25375817 - 25375890
Alignment:
| Q |
102 |
aaagtcgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgc |
175 |
Q |
| |
|
||||| ||||||| ||||||||||||| |||| |||| ||||| || |||||| |||||||||||||||||| |
|
|
| T |
25375817 |
aaagttgcgtcaagcaaagtgaccaaacatgacaaaacatgttcttaccatcaacatgtttttataccatttgc |
25375890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 37932116 - 37932185
Alignment:
| Q |
17 |
gaaaacatgcatgtgtacgcttgattg-ggtttcaccacttgtgcgattatggatcaaggcttttacagt |
85 |
Q |
| |
|
||||||||||||| || |||||||| |||||||||||||||| ||||| || ||||||||||||||| |
|
|
| T |
37932116 |
gaaaacatgcatgcgtggacttgattgaggtttcaccacttgtgggattaggggccaaggcttttacagt |
37932185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 53; Significance: 5e-21; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 37873622 - 37873758
Alignment:
| Q |
102 |
aaagtcgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcac |
201 |
Q |
| |
|
||||| ||||||| ||||||| ||||| |||||||| |||||| | ||||||| |||||||||||||||||| ||||| || || |||| |||||| |
|
|
| T |
37873622 |
aaagttgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacacttttggcttcctagcac |
37873721 |
T |
|
| Q |
202 |
cagatgttgttga-cttctacataaagttcaaagggt |
237 |
Q |
| |
|
|||| |||||||| |||||||||| |||||||||||| |
|
|
| T |
37873722 |
cagaggttgttgaccttctacatagagttcaaagggt |
37873758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 111 - 250
Target Start/End: Original strand, 25663025 - 25663165
Alignment:
| Q |
111 |
tcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgttg |
210 |
Q |
| |
|
|||||||||||| ||||| |||||||| |||||| | ||||||| |||||||||||||||||| ||||| || | | |||| ||||| |||| |||| |
|
|
| T |
25663025 |
tcaaacaaagtggccaaacatgagaaagcgtgttctgataatcaacatgtttttataccatttgcttttgacactttcagcttcctagcatcagaagttg |
25663124 |
T |
|
| Q |
211 |
ttga-cttctacataaagttcaaagggttgtccatatcaat |
250 |
Q |
| |
|
|||| |||||||||| ||| ||||||||| | ||||||||| |
|
|
| T |
25663125 |
ttgatcttctacatagagtccaaagggttatgcatatcaat |
25663165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 15292010 - 15292082
Alignment:
| Q |
102 |
aaagtcgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttg |
174 |
Q |
| |
|
||||| ||||||||||||||| ||||| ||||||||| |||||| | ||||||| ||||||||||| ||||| |
|
|
| T |
15292010 |
aaagtggcgtcaaacaaagtggccaaacatgagaaaacgtgttctgacaatcaacatgtttttatacaatttg |
15292082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 32230491 - 32230560
Alignment:
| Q |
102 |
aaagtcgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccat |
171 |
Q |
| |
|
||||| ||||||| ||||||||||||| |||||||||||||||| | ||||||| | ||||||||||| |
|
|
| T |
32230491 |
aaagttgcgtcaagcaaagtgaccaaacatgagaaaatgtgttctgacaatcaacaagcttttataccat |
32230560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 14423795 - 14423722
Alignment:
| Q |
108 |
gcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttga |
181 |
Q |
| |
|
||||||| |||||||||| || |||||||| |||||| | ||||||| || ||||||||||||||| ||||| |
|
|
| T |
14423795 |
gcgtcaagcaaagtgaccgaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttga |
14423722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 49; Significance: 1e-18; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 255
Target Start/End: Complemental strand, 39434876 - 39434636
Alignment:
| Q |
17 |
gaaaacatgcatgtgtacgcttgattggg-tttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaa |
115 |
Q |
| |
|
|||||||||||||||| ||||| |||| |||||||||||||| | ||| || | ||||||||||||| | ||| |||| || ||||| ||||||| |
|
|
| T |
39434876 |
gaaaacatgcatgtgtgtacttgactggggtttcaccacttgtgggtttaggggtggaggcttttacagtaggacaggaagctctaaaagttgcgtcaag |
39434777 |
T |
|
| Q |
116 |
caaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgttgttga- |
214 |
Q |
| |
|
||||||| ||||| |||||||| |||||| | ||||||| || |||||||||||||| ||||| || || ||||| ||||| |||| | |||| |
|
|
| T |
39434776 |
caaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgtttttgacacttttgacttcctagcatcagaggcatttgat |
39434677 |
T |
|
| Q |
215 |
cttctacataaagttcaaagggttgtccatatcaatctaat |
255 |
Q |
| |
|
|||||||||| ||| ||||||||| | ||||||||| |||| |
|
|
| T |
39434676 |
cttctacatagagtccaaagggttatgcatatcaatgtaat |
39434636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 233
Target Start/End: Complemental strand, 24125237 - 24125019
Alignment:
| Q |
17 |
gaaaacatgcatgtgtacgcttgattggg-tttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaa |
115 |
Q |
| |
|
||||||||||||||||| ||||| |||| |||||||||||||| ||||||| || | ||||||| |||| ||| | || ||| |||| || |||| |
|
|
| T |
24125237 |
gaaaacatgcatgtgtagacttgactggggtttcaccacttgtgggattatgcgtcgtgccttttacggtgggacaagcagccctaaaagctgcatcaag |
24125138 |
T |
|
| Q |
116 |
caaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgttgtt-ga |
214 |
Q |
| |
|
|||| || ||||| |||||||| ||| || | ||||||| || ||||||||||||||| ||||| | || | ||| |||||||||| |||||| | |
|
|
| T |
24125137 |
caaaatggccaaacatgagaaagcgtgctctgacaatcaacatgcttttataccatttgcttttgacaattttgatttcctagcaccagaggttgttggc |
24125038 |
T |
|
| Q |
215 |
cttctacataaagttcaaa |
233 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
24125037 |
cttctacataaagttcaaa |
24125019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 25021712 - 25021934
Alignment:
| Q |
17 |
gaaaacatgcatgtgtacgcttgattgg-gtttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaa |
115 |
Q |
| |
|
|||||||||||||||| ||||| || ||||||||||||||| ||||| || || | | ||||||||| |||| || ||| ||||| | ||||| |
|
|
| T |
25021712 |
gaaaacatgcatgtgtggacttgaccggagtttcaccacttgtgggattaggggtcgatgtttttacagtatgacatacagccctaaaagttgtgtcaag |
25021811 |
T |
|
| Q |
116 |
caaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgttgttga- |
214 |
Q |
| |
|
||||||| |||||||||||| ||||||| | ||||||| |||||||||||||||| | ||||| | || |||| |||||||||| |||||||| |
|
|
| T |
25021812 |
caaagtggtgaaatatgagaaagtgtgttctcacaatcaacatgtttttataccattttcttttgacatttttggcttcctagcaccagaggttgttgac |
25021911 |
T |
|
| Q |
215 |
cttctacataaagttcaaagggt |
237 |
Q |
| |
|
| || ||| |||||||||||||| |
|
|
| T |
25021912 |
catccacacaaagttcaaagggt |
25021934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 38815407 - 38815281
Alignment:
| Q |
112 |
caaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgttgt |
211 |
Q |
| |
|
||||||||||| ||||| |||||||| |||||| | ||||||| || ||||||||||||||| ||||| || | |||| |||||||||| | ||| |
|
|
| T |
38815407 |
caaacaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttccgcttcctagcaccagagggtgt |
38815308 |
T |
|
| Q |
212 |
tga-cttctacataaagttcaaagggt |
237 |
Q |
| |
|
||| |||||||||| |||||||||||| |
|
|
| T |
38815307 |
tgaccttctacatagagttcaaagggt |
38815281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 500436 - 500279
Alignment:
| Q |
17 |
gaaaacatgcatgtgtacgcttgattg-ggtttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaa |
115 |
Q |
| |
|
||||||||||||||||| ||||| || |||||||||||||||| ||||| | || | ||||||| || | || || ||| ||||| ||||||| |
|
|
| T |
500436 |
gaaaacatgcatgtgtagacttgagtgaggtttcaccacttgtgggattaggtgtcgggccttttacggtaggaccgacagccctaaaagttgcgtcaag |
500337 |
T |
|
| Q |
116 |
caaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccattt |
173 |
Q |
| |
|
||||||| ||||| ||||||||| |||||| | ||||||| || ||||||||||||| |
|
|
| T |
500336 |
caaagtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttataccattt |
500279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 55933387 - 55933581
Alignment:
| Q |
43 |
gggtttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaacaaagtgaccaaatatgagaaaatgtg |
142 |
Q |
| |
|
|||||||||| |||||| | ||| || ||| ||||||||| || | ||| || ||| ||||| ||||||||||||||| ||||| |||||||| | || |
|
|
| T |
55933387 |
gggtttcaccccttgtgggtttaagggtcagggcttttacggtaggacagtcagccctaaaagttgcgtcaaacaaagtggccaaacatgagaaagtttg |
55933486 |
T |
|
| Q |
143 |
ttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgttgttga-cttctacataaagttcaaagggtt |
238 |
Q |
| |
|
||| | ||||||| || ||||||||||||||| ||||| || | ||||| ||||| ||| |||||||| |||||||||| ||| ||||||||| |
|
|
| T |
55933487 |
ttctaacaatcaacatgcttttataccatttgcttttgacactttcgacttcctagcatcag--gttgttgaccttctacatagagtccaaagggtt |
55933581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 233
Target Start/End: Original strand, 34107684 - 34107812
Alignment:
| Q |
108 |
gcgtcaaacaaagtgaccaaatatgagaaaa--tgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccaga |
205 |
Q |
| |
|
||||||||| ||||| ||||| ||||||||| |||||||| | ||||||| ||||||||||||||||| ||||| || | | ||| |||||||||| |
|
|
| T |
34107684 |
gcgtcaaacgaagtggccaaacatgagaaaacgtgtgttcagataatcaacatgtttttataccatttgtttttgacactttcgatttcctagcaccaga |
34107783 |
T |
|
| Q |
206 |
tgttgttga-cttctacataaagttcaaa |
233 |
Q |
| |
|
| |||||| |||||||||| |||||||| |
|
|
| T |
34107784 |
ggctgttgaccttctacatagagttcaaa |
34107812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 53619703 - 53619572
Alignment:
| Q |
108 |
gcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatg |
207 |
Q |
| |
|
||||||| ||||||| ||||| ||||||||| |||||| | ||||||| || |||||||||||||| ||||| || || ||||| ||||| |||| | |
|
|
| T |
53619703 |
gcgtcaagcaaagtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttataccatttgtttttgacacttttgacttcctagcatcagagg |
53619604 |
T |
|
| Q |
208 |
ttgttga-cttctacataaagttcaaagggtt |
238 |
Q |
| |
|
||||| |||||||||| ||| |||||||| |
|
|
| T |
53619603 |
cagttgaccttctacatagagtctaaagggtt |
53619572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 600684 - 600754
Alignment:
| Q |
110 |
gtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttg |
180 |
Q |
| |
|
||||| ||||||||||||| ||||||||| |||||| | ||| ||| || ||||||||||||||| |||| |
|
|
| T |
600684 |
gtcaagcaaagtgaccaaacatgagaaaacgtgttctaacaattaacatgcttttataccatttgcttttg |
600754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 41440068 - 41440145
Alignment:
| Q |
104 |
agtcgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttga |
181 |
Q |
| |
|
|||||| ||||||||||| |||| || ||||||||||||| | | ||||||||||||||||| |||| ||||||| |
|
|
| T |
41440068 |
agtcgcttcaaacaaagtagtcaaacataagaaaatgtgttctaacattcaacgtgtttttatactatttacatttga |
41440145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 4419297 - 4419249
Alignment:
| Q |
191 |
cttcgtagcaccagatgttgttgac-ttctacataaagttcaaagggtt |
238 |
Q |
| |
|
|||||||||| |||| ||||||||| ||||||||| ||||||||||||| |
|
|
| T |
4419297 |
cttcgtagcatcagaggttgttgaccttctacatagagttcaaagggtt |
4419249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 38535614 - 38535686
Alignment:
| Q |
163 |
ttataccatttgcatttgatacacttaacttcgtagcaccagatgttgttga-cttctacataaagttcaaag |
234 |
Q |
| |
|
||||||||||||||||||| || || ||||| |||||||||| |||||| | | |||||||| ||||||||| |
|
|
| T |
38535614 |
ttataccatttgcatttgacacttttgacttcctagcaccagaggttgttcaccctctacatagagttcaaag |
38535686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 49018172 - 49018015
Alignment:
| Q |
17 |
gaaaacatgcatgtgtacgcttgattgg-gtttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaa |
115 |
Q |
| |
|
||||||||||||||||| ||||| ||| ||||||||||||||| |||| | || || ||||||| || | ||| | | ||| ||||| ||| ||| |
|
|
| T |
49018172 |
gaaaacatgcatgtgtaaacttgactggagtttcaccacttgtggaattaggtgtcgagccttttacggtaggacaagcaaccctgaaagttacgtaaaa |
49018073 |
T |
|
| Q |
116 |
caaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccattt |
173 |
Q |
| |
|
||||||||||||| |||||||| ||||||| | ||||||| |||||||||||||||| |
|
|
| T |
49018072 |
caaagtgaccaaacatgagaaagtgtgttctaacaatcaacatgtttttataccattt |
49018015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 110 - 233
Target Start/End: Original strand, 52741504 - 52741628
Alignment:
| Q |
110 |
gtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgtt |
209 |
Q |
| |
|
|||||||||| |||||||| |||||||| |||||| | ||||||| || ||||||||||||||| ||||| || || ||| |||||||||| ||| |
|
|
| T |
52741504 |
gtcaaacaaattgaccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttggtttcctagcaccagaggtt |
52741603 |
T |
|
| Q |
210 |
gttga-cttctacataaagttcaaa |
233 |
Q |
| |
|
||||| |||||||||| |||||||| |
|
|
| T |
52741604 |
gttgaccttctacatagagttcaaa |
52741628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 13582718 - 13582560
Alignment:
| Q |
17 |
gaaaacatgcatgtgtacgcttgattg-ggtttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaa |
115 |
Q |
| |
|
||||||||||||||||| ||||| | ||||||| |||||||| ||||| | ||| | ||||||| || | ||| | || ||| |||| ||||||| |
|
|
| T |
13582718 |
gaaaacatgcatgtgtagacttgaccgaggtttcaacacttgtgggattaggtgtcaggccttttaccgtaggacaagcagccctaaaagctgcgtcaat |
13582619 |
T |
|
| Q |
116 |
caaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttg |
174 |
Q |
| |
|
|||||||| |||| || ||||| ||||||| | ||||||||||||||||||||||||| |
|
|
| T |
13582618 |
caaagtgatcaaacataagaaagtgtgttctgacaatcaacgtgtttttataccatttg |
13582560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 38146131 - 38146043
Alignment:
| Q |
150 |
aatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgttgttgac-ttctacataaagttcaaagggt |
237 |
Q |
| |
|
||||||| |||||||||||||||| ||||||| || || ||||| |||||||||| |||||| || |||||| || |||||||||||| |
|
|
| T |
38146131 |
aatcaacatgtttttataccatttacatttgacacttttgacttcctagcaccagaggttgtttacattctacttagagttcaaagggt |
38146043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 44198890 - 44198811
Alignment:
| Q |
102 |
aaagtcgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttga |
181 |
Q |
| |
|
||||| ||||||| ||||||| ||||| |||||||| |||||| | ||||||| || ||||||||||||||| ||||| |
|
|
| T |
44198890 |
aaagttgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgagaatcaacatgcttttataccatttgcttttga |
44198811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 22198103 - 22198031
Alignment:
| Q |
108 |
gcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttg |
180 |
Q |
| |
|
||||||| ||||||||||||| |||||||| ||||||| | ||||||| |||||||||||||||||| |||| |
|
|
| T |
22198103 |
gcgtcaagcaaagtgaccaaacatgagaaagtgtgttccaacaatcaacatgtttttataccatttgcttttg |
22198031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 22239718 - 22239790
Alignment:
| Q |
108 |
gcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttg |
180 |
Q |
| |
|
||||||| ||||||||||||| |||||||| ||||||| | ||||||| |||||||||||||||||| |||| |
|
|
| T |
22239718 |
gcgtcaagcaaagtgaccaaacatgagaaagtgtgttccaacaatcaacatgtttttataccatttgcttttg |
22239790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 28517277 - 28517408
Alignment:
| Q |
108 |
gcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatg |
207 |
Q |
| |
|
||||||| ||||||| ||||| |||||||| ||||| | | ||||||| |||||||||||||||||| ||||| || || ||||| ||||| |||| |
|
|
| T |
28517277 |
gcgtcaagcaaagtggccaaacatgagaaagcgtgtttagacaatcaacatgtttttataccatttgcttttgacacttttgacttcctagcatcagaga |
28517376 |
T |
|
| Q |
208 |
ttgttga-cttctacataaagttcaaagggtt |
238 |
Q |
| |
|
||||| |||||||||| ||| ||||||||| |
|
|
| T |
28517377 |
cagttgaccttctacatagagtccaaagggtt |
28517408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 9281138 - 9281251
Alignment:
| Q |
125 |
caaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgttgttga-cttctacat |
223 |
Q |
| |
|
|||| |||||||| |||||| | ||||||| || |||||||| ||||| |||||| | || |||| ||||||||||||||||||| ||||||||| |
|
|
| T |
9281138 |
caaacatgagaaagcgtgttctaacaatcaacatgcttttatactatttggatttgacattttttgcttcctagcaccagatgttgttgaccttctacat |
9281237 |
T |
|
| Q |
224 |
aaagttcaaagggt |
237 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
9281238 |
agagttcaaagggt |
9281251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 9292109 - 9292222
Alignment:
| Q |
125 |
caaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgttgttga-cttctacat |
223 |
Q |
| |
|
|||| |||||||| |||||| | ||||||| || |||||||| ||||| |||||| | || |||| ||||||||||||||||||| ||||||||| |
|
|
| T |
9292109 |
caaacatgagaaagcgtgttctaacaatcaacatgcttttatactatttggatttgacattttttgcttcctagcaccagatgttgttgaccttctacat |
9292208 |
T |
|
| Q |
224 |
aaagttcaaagggt |
237 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
9292209 |
agagttcaaagggt |
9292222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 983066 - 982990
Alignment:
| Q |
108 |
gcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatac |
184 |
Q |
| |
|
||||||| ||||||| ||||| |||||||| |||||| | ||||||| || ||||||||||||||| |||||||| |
|
|
| T |
983066 |
gcgtcaagcaaagtggccaaacatgagaaatcgtgttctgacaatcaacatgcttttataccatttgcttttgatac |
982990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 21326822 - 21326954
Alignment:
| Q |
102 |
aaagtcgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcac |
201 |
Q |
| |
|
|||| |||||||| ||||||| ||||| |||||||| |||||| | ||||||| || ||||||||||||||| ||||| || | | ||| |||||| |
|
|
| T |
21326822 |
aaagccgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcgatttcctagcac |
21326921 |
T |
|
| Q |
202 |
cagatgttgttga-cttctacataaagttcaaa |
233 |
Q |
| |
|
|||| | |||||| ||| |||||| |||||||| |
|
|
| T |
21326922 |
cagaggctgttgaccttttacatagagttcaaa |
21326954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 17249289 - 17249368
Alignment:
| Q |
102 |
aaagtcgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttga |
181 |
Q |
| |
|
||||| ||||||||||||||| ||||| |||||||| ||||||| | ||||||| || ||||||||||||||| ||||| |
|
|
| T |
17249289 |
aaagttgcgtcaaacaaagtggccaaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgcttttga |
17249368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 233
Target Start/End: Original strand, 4206494 - 4206712
Alignment:
| Q |
17 |
gaaaacatgcatgtgtacgcttgattggg-tttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaa |
115 |
Q |
| |
|
||||||||||||||||| ||||| |||| |||||||||||||| ||||| | |||| ||||||| || | ||||| || | | ||||| ||||||| |
|
|
| T |
4206494 |
gaaaacatgcatgtgtagacttgactggggtttcaccacttgtgggattaggcatcagaccttttacggtaggacatgcagccttaaaagtggcgtcaag |
4206593 |
T |
|
| Q |
116 |
caaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatgttgttga- |
214 |
Q |
| |
|
||||||| | ||| |||||||| |||||| | ||| ||| || ||||||| ||||||| ||||| || | ||| |||||||||| |||||||| |
|
|
| T |
4206594 |
caaagtggctaaacatgagaaagcgtgttctgacaatgaacatgcttttatatcatttgcttttgacactttcgggttcctagcaccagaggttgttgac |
4206693 |
T |
|
| Q |
215 |
cttctacataaagttcaaa |
233 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
4206694 |
cttctacatagagttcaaa |
4206712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 12401540 - 12401428
Alignment:
| Q |
17 |
gaaaacatgcatgtgtacgcttgattggg-tttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaa |
115 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||| || |||||||| ||| |||||||| || | ||| | || || ||||| |||||||| |
|
|
| T |
12401540 |
gaaaacatgcatgtgtagacttgattggggtttcaccacttatgggattatggttcagggcttttatggtaggacaagcagcactaaaagttgcgtcaaa |
12401441 |
T |
|
| Q |
116 |
caaagtgaccaaa |
128 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
12401440 |
caaagtggccaaa |
12401428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 34554261 - 34554389
Alignment:
| Q |
102 |
aaagtcgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcac |
201 |
Q |
| |
|
||||| ||||||| |||| ||||||| |||||||| |||||| | |||||| |||||||||||||||| | ||||| ||| | |||| |||||| |
|
|
| T |
34554261 |
aaagttgcgtcaagcaaaacgaccaaacatgagaaagcgtgttctgataatcaagatgtttttataccatttacttttgacacattcggcttcctagcac |
34554360 |
T |
|
| Q |
202 |
cagatgttgttgac-ttctacataaagtt |
229 |
Q |
| |
|
|||||| | ||||| ||||||||| |||| |
|
|
| T |
34554361 |
cagatgctattgactttctacatagagtt |
34554389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.0000000003; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 23484836 - 23484994
Alignment:
| Q |
17 |
gaaaacatgcatgtgtacgcttgatt-gggtttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaa |
115 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||||| ||||| | || | |||| || |||| ||| || ||| |||| ||||||| |
|
|
| T |
23484836 |
gaaaacatgcatgtgtagacttgattggggtttcaccacttgtgggattaagtgtcgggcctttaacggtgggacaactagccctaaaagctacgtcaaa |
23484935 |
T |
|
| Q |
116 |
caaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttg |
174 |
Q |
| |
|
||||||| |||||||||||||| ||||| | ||||||| || |||||||||||||| |
|
|
| T |
23484936 |
caaagtggccaaatatgagaaagcatgttctgacaatcaacatgcttttataccatttg |
23484994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 28225117 - 28225044
Alignment:
| Q |
108 |
gcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttga |
181 |
Q |
| |
|
||||||| |||||||||||||||||||||| || ||| | ||||||| || ||||||||||||||| ||||| |
|
|
| T |
28225117 |
gcgtcaagcaaagtgaccaaatatgagaaagcgtattctgacaatcaacatgcttttataccatttgcttttga |
28225044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 7760771 - 7760866
Alignment:
| Q |
43 |
gggtttcaccacttgtgcgattatggatcaaggcttttacagtggaacatgaagtcctcaaagtcgcgtcaaacaaagtgaccaaatatgagaaaa |
138 |
Q |
| |
|
||||||||||||||||| ||||||| | |||| |||||| |||| ||| | | ||||||||||||||||| |||||| |||| ||||||||| |
|
|
| T |
7760771 |
gggtttcaccacttgtgggattatgaaccaagacttttatggtgggacaagcaaccctcaaagtcgcgtcaagtaaagtggccaatcatgagaaaa |
7760866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 5532536 - 5532407
Alignment:
| Q |
108 |
gcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcaccagatg |
207 |
Q |
| |
|
||||||| ||||||| |||| ||||||||| ||||| | ||||||| || |||||||| |||| | ||||| || ||| |||| |||||||| | | |
|
|
| T |
5532536 |
gcgtcaagcaaagtggtcaaacatgagaaaacgtgttgtgacaatcaacatgcttttatactatttacttttgacact-ttagcttcctagcaccatagg |
5532438 |
T |
|
| Q |
208 |
ttgttga-cttctacataaagttcaaagggt |
237 |
Q |
| |
|
||||||| |||||||||| |||||||||||| |
|
|
| T |
5532437 |
ttgttgagcttctacatagagttcaaagggt |
5532407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 49534 - 49455
Alignment:
| Q |
102 |
aaagtcgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttga |
181 |
Q |
| |
|
||||| || |||||||||||| ||||| ||||||| |||||| | |||||||||| ||||||||||||||| ||||| |
|
|
| T |
49534 |
aaagttgcatcaaacaaagtggtcaaatgtgagaaatcgtgttctgacaatcaacgtgcttttataccatttgcttttga |
49455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0490 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0490
Description:
Target: scaffold0490; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 6457 - 6325
Alignment:
| Q |
102 |
aaagtcgcgtcaaacaaagtgaccaaatatgagaaaatgtgttcataaaatcaacgtgtttttataccatttgcatttgatacacttaacttcgtagcac |
201 |
Q |
| |
|
||||| ||||||| |||||| ||||| |||||||| |||||| | ||||||| || || |||||||||||| ||||| || | | ||| |||||| |
|
|
| T |
6457 |
aaagttgcgtcaagtaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttctataccatttgcttttgacactttcagtttcctagcac |
6358 |
T |
|
| Q |
202 |
cagatgttgttga-cttctacataaagttcaaa |
233 |
Q |
| |
|
|||| | |||||| |||||||||| |||||||| |
|
|
| T |
6357 |
cagaggctgttgaccttctacatagagttcaaa |
6325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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