View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11790_high_4 (Length: 406)

Name: NF11790_high_4
Description: NF11790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11790_high_4
NF11790_high_4
[»] chr6 (31 HSPs)
chr6 (20-390)||(27879960-27880331)
chr6 (140-243)||(13436569-13436672)
chr6 (116-198)||(24319014-24319096)
chr6 (116-243)||(29284267-29284394)
chr6 (144-235)||(32670004-32670095)
chr6 (116-243)||(10517200-10517327)
chr6 (118-212)||(361166-361260)
chr6 (116-162)||(15305127-15305173)
chr6 (116-161)||(16179022-16179067)
chr6 (119-243)||(15963885-15964009)
chr6 (115-163)||(23610341-23610389)
chr6 (117-185)||(30938390-30938458)
chr6 (119-243)||(32611496-32611620)
chr6 (116-207)||(2251839-2251930)
chr6 (116-243)||(9435627-9435754)
chr6 (116-235)||(10934600-10934719)
chr6 (116-243)||(19953770-19953897)
chr6 (116-243)||(31802054-31802181)
chr6 (116-243)||(33573818-33573945)
chr6 (116-246)||(17441778-17441908)
chr6 (169-243)||(27218938-27219012)
chr6 (124-162)||(32620094-32620132)
chr6 (116-205)||(6419063-6419151)
chr6 (116-165)||(8569707-8569756)
chr6 (140-205)||(12524966-12525031)
chr6 (116-157)||(28021229-28021270)
chr6 (117-205)||(1435811-1435899)
chr6 (117-165)||(1918472-1918520)
chr6 (124-180)||(2726416-2726472)
chr6 (190-238)||(7674883-7674931)
chr6 (171-243)||(18904321-18904393)
[»] chr7 (53 HSPs)
chr7 (116-243)||(10901645-10901773)
chr7 (116-243)||(32750017-32750143)
chr7 (116-205)||(47437935-47438024)
chr7 (124-243)||(28799962-28800082)
chr7 (116-243)||(15238890-15239017)
chr7 (120-234)||(45329141-45329254)
chr7 (128-205)||(36931986-36932063)
chr7 (116-208)||(4232580-4232672)
chr7 (116-243)||(25833556-25833683)
chr7 (117-179)||(1399161-1399223)
chr7 (140-206)||(22774065-22774131)
chr7 (189-243)||(23220914-23220968)
chr7 (171-243)||(4960840-4960912)
chr7 (116-243)||(20101594-20101722)
chr7 (144-208)||(23754991-23755055)
chr7 (116-243)||(29461757-29461884)
chr7 (116-243)||(30806116-30806243)
chr7 (171-243)||(40200773-40200844)
chr7 (116-196)||(47070298-47070378)
chr7 (116-243)||(3766812-3766939)
chr7 (124-163)||(7664211-7664250)
chr7 (116-243)||(9877209-9877336)
chr7 (116-243)||(12640531-12640658)
chr7 (118-165)||(19599145-19599192)
chr7 (116-243)||(19752910-19753037)
chr7 (116-243)||(23102500-23102627)
chr7 (116-243)||(29617406-29617533)
chr7 (117-160)||(30872024-30872067)
chr7 (128-243)||(31026232-31026347)
chr7 (116-243)||(32619351-32619478)
chr7 (116-243)||(34267493-34267620)
chr7 (116-163)||(41331101-41331148)
chr7 (116-163)||(41853998-41854045)
chr7 (116-243)||(47999781-47999908)
chr7 (124-186)||(2916108-2916170)
chr7 (117-163)||(7876001-7876047)
chr7 (115-221)||(22609993-22610099)
chr7 (144-206)||(27788298-27788360)
chr7 (144-206)||(27791454-27791516)
chr7 (129-207)||(28800100-28800178)
chr7 (116-198)||(38889480-38889562)
chr7 (118-163)||(18677027-18677072)
chr7 (116-205)||(21066887-21066976)
chr7 (140-185)||(27425113-27425158)
chr7 (117-198)||(30388494-30388575)
chr7 (118-163)||(37411759-37411804)
chr7 (115-243)||(2434658-2434785)
chr7 (171-243)||(24508882-24508954)
chr7 (117-237)||(29625923-29626041)
chr7 (171-243)||(35835641-35835713)
chr7 (116-243)||(35950129-35950256)
chr7 (171-243)||(40705890-40705962)
chr7 (115-235)||(48674512-48674632)
[»] chr4 (50 HSPs)
chr4 (116-208)||(624481-624573)
chr4 (118-241)||(55260257-55260380)
chr4 (115-206)||(11294817-11294908)
chr4 (116-205)||(51890798-51890887)
chr4 (116-243)||(42231513-42231640)
chr4 (116-246)||(45849048-45849178)
chr4 (116-205)||(31852350-31852439)
chr4 (116-205)||(49264527-49264616)
chr4 (124-204)||(23924853-23924933)
chr4 (171-243)||(46562699-46562771)
chr4 (116-243)||(3035997-3036124)
chr4 (116-243)||(39023176-39023303)
chr4 (116-243)||(48569118-48569245)
chr4 (115-205)||(42044026-42044116)
chr4 (116-205)||(32293109-32293198)
chr4 (116-205)||(45139861-45139950)
chr4 (116-205)||(55055917-55056006)
chr4 (116-203)||(8564172-8564259)
chr4 (171-243)||(36099125-36099197)
chr4 (117-205)||(43627241-43627329)
chr4 (117-221)||(50376614-50376717)
chr4 (116-243)||(3847682-3847809)
chr4 (116-243)||(4590247-4590374)
chr4 (116-243)||(15603982-15604109)
chr4 (116-163)||(26250648-26250695)
chr4 (116-243)||(33933681-33933808)
chr4 (116-243)||(40051623-40051750)
chr4 (116-243)||(43147326-43147453)
chr4 (116-243)||(43596896-43597023)
chr4 (116-243)||(45112054-45112180)
chr4 (116-243)||(46105536-46105663)
chr4 (116-243)||(46774972-46775099)
chr4 (116-206)||(3784913-3785002)
chr4 (118-207)||(29922388-29922475)
chr4 (144-206)||(40486470-40486532)
chr4 (118-243)||(626924-627049)
chr4 (124-205)||(6170949-6171030)
chr4 (117-158)||(43722764-43722805)
chr4 (118-243)||(46998310-46998435)
chr4 (171-243)||(5304952-5305024)
chr4 (171-243)||(7513323-7513395)
chr4 (171-243)||(12581970-12582042)
chr4 (171-243)||(21380120-21380192)
chr4 (118-238)||(35851650-35851768)
chr4 (128-208)||(41137897-41137977)
chr4 (117-165)||(43034356-43034404)
chr4 (118-198)||(46582637-46582717)
chr4 (116-160)||(52015492-52015536)
chr4 (171-243)||(54029609-54029681)
chr4 (171-243)||(54215817-54215889)
[»] chr8 (50 HSPs)
chr8 (116-243)||(13059119-13059246)
chr8 (119-237)||(42023415-42023532)
chr8 (128-243)||(24517308-24517423)
chr8 (118-243)||(13105094-13105219)
chr8 (116-205)||(481012-481101)
chr8 (115-205)||(38283124-38283214)
chr8 (109-241)||(36358961-36359092)
chr8 (117-243)||(17499032-17499158)
chr8 (116-241)||(8034356-8034481)
chr8 (115-243)||(31450899-31451027)
chr8 (115-162)||(22202713-22202760)
chr8 (116-243)||(37717364-37717491)
chr8 (117-243)||(43186855-43186981)
chr8 (119-205)||(12770372-12770458)
chr8 (171-232)||(8183376-8183437)
chr8 (115-204)||(10083163-10083252)
chr8 (117-206)||(41458297-41458386)
chr8 (115-243)||(2787023-2787151)
chr8 (117-165)||(6447188-6447236)
chr8 (115-163)||(14342526-14342574)
chr8 (117-205)||(15856486-15856574)
chr8 (171-243)||(37669742-37669814)
chr8 (171-243)||(37708747-37708819)
chr8 (116-243)||(257540-257667)
chr8 (116-243)||(658253-658380)
chr8 (116-243)||(843989-844116)
chr8 (119-206)||(6851005-6851092)
chr8 (116-243)||(16449126-16449253)
chr8 (119-198)||(33182600-33182678)
chr8 (306-374)||(34986260-34986324)
chr8 (116-243)||(43283908-43284035)
chr8 (117-243)||(10200623-10200749)
chr8 (116-238)||(10736821-10736943)
chr8 (116-198)||(26022248-26022330)
chr8 (117-163)||(26796960-26797006)
chr8 (117-243)||(38344051-38344177)
chr8 (116-198)||(43856369-43856451)
chr8 (119-196)||(11231424-11231501)
chr8 (140-205)||(25812189-25812254)
chr8 (116-243)||(12167-12294)
chr8 (117-165)||(7553678-7553726)
chr8 (116-243)||(8265269-8265396)
chr8 (117-165)||(9478049-9478097)
chr8 (123-163)||(18412564-18412604)
chr8 (155-243)||(18926077-18926165)
chr8 (117-165)||(19163550-19163598)
chr8 (118-198)||(25890391-25890471)
chr8 (116-243)||(29733947-29734074)
chr8 (171-243)||(36035121-36035193)
chr8 (171-243)||(44053382-44053454)
[»] chr3 (50 HSPs)
chr3 (118-243)||(3614022-3614147)
chr3 (117-205)||(19222566-19222654)
chr3 (116-205)||(24303391-24303480)
chr3 (115-179)||(20887775-20887839)
chr3 (115-243)||(49375624-49375751)
chr3 (116-243)||(25938872-25938999)
chr3 (116-207)||(55383866-55383957)
chr3 (115-205)||(4227724-4227814)
chr3 (116-246)||(19999868-19999998)
chr3 (146-243)||(25883930-25884027)
chr3 (117-205)||(44764724-44764810)
chr3 (118-243)||(53432679-53432804)
chr3 (119-243)||(49443366-49443489)
chr3 (140-243)||(9685021-9685123)
chr3 (116-243)||(18194339-18194466)
chr3 (116-243)||(53752642-53752769)
chr3 (123-205)||(38949682-38949764)
chr3 (116-238)||(39719936-39720058)
chr3 (124-205)||(52992039-52992120)
chr3 (188-241)||(9114084-9114137)
chr3 (141-205)||(5173990-5174054)
chr3 (175-243)||(46767403-46767471)
chr3 (116-243)||(4139001-4139128)
chr3 (116-243)||(9176528-9176655)
chr3 (116-243)||(17608261-17608388)
chr3 (116-243)||(22501873-22502000)
chr3 (119-206)||(28951720-28951807)
chr3 (118-185)||(32776214-32776281)
chr3 (116-243)||(37800553-37800680)
chr3 (116-243)||(40933773-40933900)
chr3 (116-243)||(45701345-45701472)
chr3 (116-243)||(47098733-47098860)
chr3 (116-243)||(50496756-50496883)
chr3 (116-243)||(52410183-52410310)
chr3 (116-243)||(52973995-52974122)
chr3 (140-206)||(43280093-43280159)
chr3 (116-198)||(53347277-53347359)
chr3 (115-176)||(12976605-12976666)
chr3 (115-243)||(54897317-54897443)
chr3 (117-165)||(7557548-7557596)
chr3 (171-243)||(15085626-15085698)
chr3 (171-243)||(19151589-19151661)
chr3 (171-243)||(19591521-19591593)
chr3 (171-243)||(27329874-27329946)
chr3 (117-165)||(27397626-27397674)
chr3 (116-160)||(28093352-28093396)
chr3 (171-243)||(39709095-39709166)
chr3 (118-206)||(48515364-48515452)
chr3 (171-243)||(51879151-51879223)
chr3 (116-160)||(51882219-51882263)
[»] chr5 (28 HSPs)
chr5 (116-246)||(39777759-39777889)
chr5 (116-243)||(39799972-39800099)
chr5 (116-243)||(17545114-17545241)
chr5 (116-243)||(32706323-32706450)
chr5 (170-243)||(24250540-24250613)
chr5 (140-243)||(7443364-7443467)
chr5 (116-243)||(9835034-9835161)
chr5 (116-198)||(5900293-5900374)
chr5 (128-243)||(6167223-6167340)
chr5 (115-243)||(8968749-8968877)
chr5 (116-243)||(6518718-6518845)
chr5 (117-160)||(8350669-8350712)
chr5 (116-243)||(12463757-12463884)
chr5 (116-243)||(21918053-21918180)
chr5 (116-243)||(32505689-32505816)
chr5 (116-243)||(35515513-35515640)
chr5 (117-163)||(20501397-20501443)
chr5 (116-198)||(42525401-42525483)
chr5 (116-205)||(3198328-3198417)
chr5 (116-205)||(4067983-4068072)
chr5 (116-205)||(24477826-24477915)
chr5 (128-205)||(28822736-28822813)
chr5 (118-163)||(41083559-41083604)
chr5 (171-243)||(3741010-3741082)
chr5 (118-162)||(28758441-28758485)
chr5 (171-243)||(29154898-29154970)
chr5 (171-243)||(36564364-36564436)
chr5 (117-165)||(41650953-41651001)
[»] chr1 (50 HSPs)
chr1 (140-212)||(2997630-2997702)
chr1 (116-240)||(8741474-8741598)
chr1 (116-205)||(47469053-47469142)
chr1 (117-243)||(12613179-12613305)
chr1 (116-198)||(36666563-36666645)
chr1 (116-205)||(19564133-19564221)
chr1 (116-205)||(24874972-24875061)
chr1 (116-205)||(25036242-25036331)
chr1 (116-205)||(25041454-25041543)
chr1 (115-243)||(34058214-34058342)
chr1 (116-243)||(1151760-1151887)
chr1 (116-243)||(13773169-13773296)
chr1 (116-243)||(15390221-15390348)
chr1 (116-243)||(22563387-22563514)
chr1 (118-205)||(23991244-23991331)
chr1 (131-205)||(24910458-24910532)
chr1 (118-205)||(34562767-34562854)
chr1 (116-243)||(43884795-43884922)
chr1 (116-243)||(46965741-46965868)
chr1 (115-205)||(11333664-11333754)
chr1 (115-205)||(11491685-11491775)
chr1 (116-205)||(10842037-10842126)
chr1 (116-192)||(40051462-40051538)
chr1 (115-243)||(2277754-2277882)
chr1 (116-243)||(6702577-6702704)
chr1 (115-243)||(8984448-8984575)
chr1 (116-243)||(15595726-15595853)
chr1 (116-243)||(1570134-1570261)
chr1 (116-243)||(6438006-6438133)
chr1 (116-243)||(7166169-7166296)
chr1 (116-243)||(7180556-7180683)
chr1 (116-243)||(10664737-10664863)
chr1 (115-198)||(11215001-11215084)
chr1 (116-243)||(15819543-15819670)
chr1 (116-243)||(16343029-16343156)
chr1 (116-243)||(21265657-21265784)
chr1 (172-243)||(28344932-28345003)
chr1 (118-160)||(29935983-29936025)
chr1 (119-205)||(31124618-31124704)
chr1 (115-204)||(44579882-44579972)
chr1 (123-205)||(45416158-45416240)
chr1 (117-243)||(52369599-52369725)
chr1 (116-185)||(41926978-41927046)
chr1 (117-165)||(10356197-10356245)
chr1 (117-205)||(18607789-18607877)
chr1 (115-243)||(19011355-19011483)
chr1 (116-243)||(32594252-32594379)
chr1 (171-243)||(39346921-39346993)
chr1 (116-243)||(40519485-40519613)
chr1 (171-243)||(49907336-49907408)
[»] chr2 (38 HSPs)
chr2 (118-205)||(44558006-44558092)
chr2 (129-243)||(2145677-2145791)
chr2 (116-243)||(19281609-19281736)
chr2 (117-240)||(44857179-44857302)
chr2 (116-208)||(35429586-35429671)
chr2 (116-205)||(20919611-20919700)
chr2 (171-243)||(18862308-18862380)
chr2 (119-243)||(33587093-33587217)
chr2 (116-163)||(43146353-43146400)
chr2 (116-206)||(27297176-27297266)
chr2 (116-238)||(40535396-40535518)
chr2 (140-205)||(1964378-1964443)
chr2 (115-243)||(45119649-45119777)
chr2 (171-243)||(32854588-32854660)
chr2 (128-208)||(34125759-34125838)
chr2 (115-243)||(41509516-41509644)
chr2 (117-180)||(2256970-2257033)
chr2 (116-235)||(4562702-4562821)
chr2 (115-238)||(17487704-17487827)
chr2 (198-248)||(10058952-10059002)
chr2 (117-163)||(14663986-14664032)
chr2 (116-238)||(33228880-33229002)
chr2 (117-243)||(36182644-36182770)
chr2 (115-205)||(40363051-40363141)
chr2 (140-197)||(3154022-3154079)
chr2 (116-185)||(28771580-28771649)
chr2 (117-198)||(44666330-44666411)
chr2 (128-200)||(1500974-1501046)
chr2 (141-205)||(3596276-3596340)
chr2 (187-243)||(14518356-14518412)
chr2 (124-243)||(15939298-15939417)
chr2 (171-243)||(17034791-17034863)
chr2 (171-243)||(17089299-17089371)
chr2 (117-185)||(17560255-17560322)
chr2 (171-243)||(18073799-18073871)
chr2 (129-185)||(32190002-32190058)
chr2 (117-165)||(34977203-34977251)
chr2 (124-164)||(44920024-44920064)
[»] scaffold0690 (1 HSPs)
scaffold0690 (116-243)||(3667-3794)
[»] scaffold0250 (1 HSPs)
scaffold0250 (115-163)||(15005-15053)
[»] scaffold0275 (1 HSPs)
scaffold0275 (116-243)||(8822-8948)
[»] scaffold0187 (2 HSPs)
scaffold0187 (128-243)||(11062-11177)
scaffold0187 (128-243)||(21390-21505)
[»] scaffold0128 (1 HSPs)
scaffold0128 (116-243)||(17621-17748)
[»] scaffold0088 (1 HSPs)
scaffold0088 (116-243)||(10768-10895)
[»] scaffold0246 (1 HSPs)
scaffold0246 (144-206)||(24409-24471)
[»] scaffold0519 (1 HSPs)
scaffold0519 (119-196)||(2951-3028)


Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 390
Target Start/End: Complemental strand, 27880331 - 27879960
Alignment:
Q  20 gttatattcgatcatatcatatgaaacaaacaattt-aaacatattttagaaactaatgtgaaaatacgacatccttaaataaatttaagtatgtgtccg 118  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| |||||| |||||| | ||| ||||||||||||    
T  27880331 gttatattccatcatatcatatgaaacaaacaattttaaacatattttagaatctaatatgaaaatatgacatcgttaaatga-tttgagtatgtgtccg 27880233  T
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttc 218  Q
    |||  |||||||| |||| | | |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||    
T  27880232 tgaacttaactcaattgg-aggaacattgtataatttatgcagagtcagcgattcgaacccctgacattccacctctccatatttaaaatatggaagctc 27880134  T
Q  219 cagtcattaggctacttgacaaaaataatgatttgattatatccatgtgtaaaatgttttatatttgtatgc--nnnnnnnnnnnnnnnaccaaaataaa 316  Q
    ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||    
T  27880133 cagccattaggctacttgacaaaaaaaatgatttgattatatccatgtgtaaaatgttttatatttgtatgctttttttttttttttttaccaaaataaa 27880034  T
Q  317 cttatattatttcattcatttataacaatagttgtaatgtaagatagaatcaaatcaaatattcataacaatag 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27880033 cttatattatttcattcatttataacaatagttgtaatgtaagatagaatcaaatcaaatattcataacaatag 27879960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 13436569 - 13436672
Alignment:
Q  140 ggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgaca 239  Q
    |||||||||||||| ||||||||| ||  | ||| |||||||||||  ||||||||||||||||||||||| | ||||| |  |  ||||||||||||||    
T  13436569 ggacattgcataatatatgcaggggcaatggttcaaacccctgacaccccacttctccatatttaaaatatttgagttctatccgctaggctacttgaca 13436668  T
Q  240 aaaa 243  Q
    ||||    
T  13436669 aaaa 13436672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 24319014 - 24319096
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    |||||||||||  |||||||| | |||||||||||||||||||||||| | | | |||||||||| |||| ||||||||||||    
T  24319014 ccgtgagtttagttcagttggtagggacattgcataatttatgcaggggccggggttcgaaccccggacactccacttctcca 24319096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 29284267 - 29284394
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||||||| ||||||||| | ||| |||||||| | |||| |||| | |   |||||||||| ||||  ||||||||||| | ||||| | ||||||    
T  29284267 ccgtgagtttagctcagttggtagggatattgcatattatatgaaggggccggagttcgaaccccggacaccccacttctccacaattaaattgtgtaag 29284366  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
    ||| || || ||||||||||||||||||    
T  29284367 ttctagccactaggctacttgacaaaaa 29284394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 32670095 - 32670004
Alignment:
Q  144 attgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctactt 235  Q
    |||||||||||||||||||| ||| | |||||||||||||||  | ||||||||||||||| ||| ||| || ||||  || ||||||||||    
T  32670095 attgcataatttatgcaggggcaggggttcgaacccctgacaccctacttctccatatttataatgtgtgagctccaaacactaggctactt 32670004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 10517200 - 10517327
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| ||||| |||||||  | |||||||||   | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  10517200 ccgtgagcttagctcagttggtatggatattgcattttatatgcaggggtcggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 10517299  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  10517300 ctctagccactaggctacttgacaaaaa 10517327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 212
Target Start/End: Original strand, 361166 - 361260
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgt 212  Q
    ||||| ||||||||||||| | ||| |||||||| | ||||||||  | | | ||||||| || ||||  |||||||||||||||||||||||||    
T  361166 gtgagcttaactcagttggtagggatattgcatattatatgcaggagccgaggttcgaactccagacaccccacttctccatatttaaaatatgt 361260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 15305173 - 15305127
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagg 162  Q
    ||||||||||||||||||||| | | |||||||||||||||||||||    
T  15305173 ccgtgagtttaactcagttggtaggaacattgcataatttatgcagg 15305127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 16179022 - 16179067
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcag 161  Q
    ||||||| |||||||| |||| ||||||||||||||||||||||||    
T  16179022 ccgtgagcttaactcaattggtatggacattgcataatttatgcag 16179067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 15964009 - 15963885
Alignment:
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttc 218  Q
    |||| ||| ||||||||| | ||| |||||||| ||||||||||| | | | |||||||||  |||| |||||||||||| | || || | ||| |||||    
T  15964009 tgagcttagctcagttggtagggatattgcatattttatgcaggggctggggttcgaaccctggacactccacttctccacaatttaattgtgtgagttc 15963910  T
Q  219 cagtcattaggctacttgacaaaaa 243  Q
     || || ||||||||||||| ||||    
T  15963909 tagccactaggctacttgaccaaaa 15963885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 23610389 - 23610341
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    |||||||| ||| ||||||||| | ||||||||||||||||||||||||    
T  23610389 tccgtgagcttagctcagttggtagggacattgcataatttatgcaggg 23610341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 30938390 - 30938458
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgaca 185  Q
    |||||| ||||||||||||| | |||||||||||||| ||||||||| | | | |||||||||| ||||    
T  30938390 cgtgagcttaactcagttggtagggacattgcataatatatgcagggaccggggttcgaaccccagaca 30938458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 32611620 - 32611496
Alignment:
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttc 218  Q
    |||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| || ||    
T  32611620 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctc 32611521  T
Q  219 cagtcattaggctacttgacaaaaa 243  Q
     || || ||||||||||||||||||    
T  32611520 tagccactaggctacttgacaaaaa 32611496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 2251839 - 2251930
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaa 207  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| ||||  ||||||||||| ||||||||    
T  2251839 ccgtgagcttagctcagttggtagggatattgcatactatatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaa 2251930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 9435627 - 9435754
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| |||||||||||| | || || | ||| ||    
T  9435627 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaaccccggacactccacttctccacaatttaattgtgtgag 9435726  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || |||||||||| ||||| ||||    
T  9435727 ctctagccattaggctatttgaccaaaa 9435754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 235
Target Start/End: Original strand, 10934600 - 10934719
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  10934600 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 10934699  T
Q  216 ttccagtcattaggctactt 235  Q
    ||| || || ||||||||||    
T  10934700 ttctagccactaggctactt 10934719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 19953897 - 19953770
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  19953897 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 19953798  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  19953797 ctctagccactaggctacttgaccaaaa 19953770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 31802054 - 31802181
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||||||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  31802054 ccgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 31802153  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||| ||||||||| ||||    
T  31802154 ctctagccactagactacttgaccaaaa 31802181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 33573818 - 33573945
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||  |||| |||||||||||| | ||||| | ||| ||    
T  33573818 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccctggacactccacttctccacaattaaattgtgtgag 33573917  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  33573918 ctctagccactaggctacttgacaaaaa 33573945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 246
Target Start/End: Complemental strand, 17441908 - 17441778
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  17441908 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 17441809  T
Q  216 ttccagtcattaggctacttgacaaaaataa 246  Q
     || || || ||||||||||||  |||||||    
T  17441808 ctctagccactaggctacttgatcaaaataa 17441778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 27218938 - 27219012
Alignment:
Q  169 gattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||||| |||| |||||||||||| | ||||| | ||| || || || || ||||||||||||||||||    
T  27218938 gattcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 27219012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 32620132 - 32620094
Alignment:
Q  124 ttaactcagttgggatggacattgcataatttatgcagg 162  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  32620132 ttaactcagttgatatggacattgcataatttatgcagg 32620094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 6419151 - 6419063
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||||||||||||| |  || |||||||| | ||||||||||| | | |||||| ||| ||||  ||||||||||| ||||||    
T  6419151 ccgtgagtttaactcagttggtagagatattgcatattatatgcagggtccggggttcgaa-cccggacaacccacttctccacatttaa 6419063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 8569707 - 8569756
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    |||||||||||||||| |||| ||||||| |||||||| |||||| ||||    
T  8569707 ccgtgagtttaactcaattggtatggacaatgcataatatatgcaaggtc 8569756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 12525031 - 12524966
Alignment:
Q  140 ggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||| |||||||||| ||  | | ||||||||||  |||| ||||||||||||||||||    
T  12525031 ggacattgcattatttatgcagtgtttggggttcgaaccccgaacatcccacttctccatatttaa 12524966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 28021229 - 28021270
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttat 157  Q
    ||||||||||| ||||||||| | ||||||||||||||||||    
T  28021229 ccgtgagtttagctcagttggtagggacattgcataatttat 28021270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 1435811 - 1435899
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||| |||||||||| || | ||| ||| |||| | ||||||||| |   | |||||||||| ||||||||||||||||| ||||||    
T  1435811 cgtgagcttaactcagtaggtagggatattacatattatatgcaggggccagggttcgaaccccggacattccacttctccacatttaa 1435899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 1918520 - 1918472
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    |||||||||||||||||||| || |||| |||||||| |||||| ||||    
T  1918520 cgtgagtttaactcagttggtatagacaatgcataatatatgcaaggtc 1918472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 2726472 - 2726416
Alignment:
Q  124 ttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccc 180  Q
    ||||||||||||| ||||||| |||||||| |||||| |||| | | ||||||||||    
T  2726472 ttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcgaacccc 2726416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 7674883 - 7674931
Alignment:
Q  190 acttctccatatttaaaatatgtaagttccagtcattaggctacttgac 238  Q
    ||||||||||||||||||||||| ||||||| ||| || | ||||||||    
T  7674883 acttctccatatttaaaatatgtgagttccaatcactatgttacttgac 7674931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 18904321 - 18904393
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| ||||  ||||||||||| ||||||||| ||| || ||||| || ||| |||| |||||||||    
T  18904321 ttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactagactacctgacaaaaa 18904393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 10901645 - 10901773
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtc-agcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||||||  |||||||  ||||||||||||||||||||||||||   |||| ||||||||||| |||  ||||||||||| ||||| ||| ||| |    
T  10901645 ccgtgagtttagttcagttgacatggacattgcataatttatgcaggggatagcggttcgaacccctaacaccccacttctccacatttataatgtgtga 10901744  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | |||||||| ||||||||||||||||||    
T  10901745 gctccagtcactaggctacttgacaaaaa 10901773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 32750017 - 32750143
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||| || ||| | |||||| | | |||| |||||||||||||| || || | ||| ||    
T  32750017 ccgtgagcttaactctgttggtatggacattgcataatttatgcacgggcaggggttcgaatctcagacactccacttctccataatt-aattgtgtgag 32750115  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || |||||||||||| ||||||||    
T  32750116 ctctagccattaggctactagacaaaaa 32750143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 47437935 - 47438024
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||| || |||||| | | |||||||||||||||||||||| ||| | ||| |||||| |||| |||||||||||| ||||||    
T  47437935 ccgtgagtttagcttagttggtaggaacattgcataatttatgcaggggcaggggttcaaaccccggacactccacttctccacatttaa 47438024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 243
Target Start/End: Complemental strand, 28800082 - 28799962
Alignment:
Q  124 ttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatattt-aaaatatgtaagttccagt 222  Q
    ||||||||||||| | ||||| |||||||||||||||||| ||| | || ||||||||||||  ||||||||| | |||| ||||| ||| || ||||      
T  28800082 ttaactcagttggtagggacaatgcataatttatgcaggggcaggggtttgaacccctgacaccccacttctctacatttaaaaatgtgtgagctccaac 28799983  T
Q  223 cattaggctacttgacaaaaa 243  Q
    || ||| ||||||||||||||    
T  28799982 cactagactacttgacaaaaa 28799962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 15238890 - 15239017
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| |||||||||||||| || || | ||| ||    
T  15238890 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacactccacttctccataatttaattgtgtgag 15238989  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  15238990 ctctagccactaggctacttgacaaaaa 15239017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 45329141 - 45329254
Alignment:
Q  120 gagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgaca-ttccacttctccatatttaaaatatgtaagttc 218  Q
    ||||||| ||||||||| | |||||||||||||||||| |||| || | |||||||||| |||||| ||||||||||||| |||| || | ||| |||||    
T  45329141 gagtttatctcagttggtagggacattgcataatttatacaggatc-gggattcgaacctctgacacttccacttctccacattt-aattgtgtgagttc 45329238  T
Q  219 cagtcattaggctact 234  Q
     | |||||||||||||    
T  45329239 taatcattaggctact 45329254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 36931986 - 36932063
Alignment:
Q  128 ctcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||| | |||||||||||||||||||||||||| | | |||||||||| ||||  ||||||||| | ||||||    
T  36931986 ctcagttggcagggacattgcataatttatgcagggtccggggttcgaaccccggacaccccacttctctacatttaa 36932063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 4232672 - 4232580
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaat 208  Q
    ||||||| |||||||| |||| |  |||||||||||||||||| |||| ||| | |||||||| ||||||  || |||||||| |||||||||    
T  4232672 ccgtgagcttaactcatttggcagtgacattgcataatttatgtaggggcagaggttcgaacctctgacaccccgcttctccacatttaaaat 4232580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 25833556 - 25833683
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| || | |||||||||||| | || || | ||||||    
T  25833556 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaaccccagatactccacttctccacaatttaattgtgtaag 25833655  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  25833656 ctctagccactaggctacttgacaaaaa 25833683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 1399161 - 1399223
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaaccc 179  Q
    |||||||||||||||||||| ||||||| ||||| || |||||| |||| | |||||||||||    
T  1399161 cgtgagtttaactcagttggtatggacaatgcatgatatatgcaaggtctgagattcgaaccc 1399223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 22774065 - 22774131
Alignment:
Q  140 ggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    |||||||||||||||||||||||| ||| | ||| |||||| ||||  ||||||||||| |||||||    
T  22774065 ggacattgcataatttatgcaggggcaggggttcaaaccccggacaccccacttctccacatttaaa 22774131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 23220914 - 23220968
Alignment:
Q  189 cacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    ||||||| || ||||||||||||| || ||||||||||||| |||||||||||||    
T  23220914 cacttcttcacatttaaaatatgtgagctccagtcattaggttacttgacaaaaa 23220968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 4960840 - 4960912
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    ||||||||||||||| |||||||||||| | ||||| | ||| || || || || ||||||||||||||||||    
T  4960840 ttcgaacccctgacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 4960912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 20101722 - 20101594
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacat-tgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||||||  |||||||| |||||||  |||||| | ||||||||| | | | ||||||| || ||||  | ||||||||||||||||||||||| |    
T  20101722 ccgtgagtttagatcagttggtatggacaaatgcatattatatgcaggggccggggttcgaactccggacaccctacttctccatatttaaaatatgtga 20101623  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | ||||| ||  || |||| |||||||||    
T  20101622 gatccagccaccagactacctgacaaaaa 20101594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 23755055 - 23754991
Alignment:
Q  144 attgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaat 208  Q
    |||||||| ||||||||||| | | |||||||||| | ||||  |||||||||||||||||||||    
T  23755055 attgcatattttatgcaggggctgagattcgaacctcagacaccccacttctccatatttaaaat 23754991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 29461884 - 29461757
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgca-gggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    ||||||||||||||||||||| | ||||| |||||||| |||||| ||||| | | |||||| ||  ||||  |||||| || ||||||||||| |||||    
T  29461884 ccgtgagtttaactcagttggtagggacaatgcataatatatgcaggggtcggaggttcgaa-cctggacaccccacttttctatatttaaaatgtgtaa 29461786  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | ||||  || |||| || ||||||||||    
T  29461785 gctccatccactaggttatttgacaaaaa 29461757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 30806116 - 30806243
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcaggg-tcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    ||||||||||| ||||||||| | ||| |||||||| | ||||||||| || | | |||||||||| ||||| ||||||||||| | ||||| | ||| |    
T  30806116 ccgtgagtttagctcagttggtagggatattgcatattatatgcaggggtcggag-ttcgaaccccggacatcccacttctccacaattaaattgtgtga 30806214  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    |||| || ||  | |||||||||||||||    
T  30806215 gttctagccaccaagctacttgacaaaaa 30806243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 40200773 - 40200844
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||| |||||||||||||||||||||| ||| || | ||| || |||||||| |||||||||    
T  40200773 ttcgaacccc-gacactccacttctccatatttaaaatgtgtgagcttcagccactaggctacctgacaaaaa 40200844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 47070378 - 47070298
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctc 196  Q
    ||||||| ||| ||||||||| |||||||||||||||||||| ||||| | | | |||||||||   |||| |||||||||    
T  47070378 ccgtgagcttagctcagttggtatggacattgcataatttatacagggaccggggttcgaaccctgaacatcccacttctc 47070298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 3766812 - 3766939
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||||||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  3766812 ccgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 3766911  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || |  || ||||||||||||| ||||    
T  3766912 ctctaaccactaggctacttgaccaaaa 3766939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 7664250 - 7664211
Alignment:
Q  124 ttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  7664250 ttaactcagttggtatgaacattgcataatttatgcaggg 7664211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 9877336 - 9877209
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| ||||  ||||||||||| | ||||| | ||| ||    
T  9877336 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgag 9877237  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
    ||| || || |||||| |||||| ||||    
T  9877236 ttctagccactaggctccttgaccaaaa 9877209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 12640658 - 12640531
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  12640658 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccagacactccacttctccacaattaaattgtgtgag 12640559  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  12640558 ctctagccactaggctacttgaccaaaa 12640531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 19599145 - 19599192
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    ||||||||||||||||||| ||||||| |||||||| |||||| ||||    
T  19599145 gtgagtttaactcagttggtatggacaatgcataatatatgcaaggtc 19599192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 19753037 - 19752910
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||  |||| |||||||||||| | || || | ||| ||    
T  19753037 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccctggacactccacttctccacaatttaattgtgtgag 19752938  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
    ||| || || ||||||||||||| ||||    
T  19752937 ttctagccactaggctacttgaccaaaa 19752910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 23102627 - 23102500
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| ||||  ||||||||||| | ||||| | ||| ||    
T  23102627 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgag 23102528  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
    ||| || || |||||||| |||| ||||    
T  23102527 ttctagccactaggctacctgaccaaaa 23102500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 29617406 - 29617533
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  29617406 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 29617505  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  29617506 ctctagccactaggctacttgaccaaaa 29617533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 30872024 - 30872067
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgca 160  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||    
T  30872024 cgtgagtttatctcagttggtatggacattgcataatatatgca 30872067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 31026232 - 31026347
Alignment:
Q  128 ctcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcatta 227  Q
    ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| || || || || ||    
T  31026232 ctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccacta 31026331  T
Q  228 ggctacttgacaaaaa 243  Q
    ||||||||||||||||    
T  31026332 ggctacttgacaaaaa 31026347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 32619351 - 32619478
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||||||||||||  | ||| |||||||| | |||| |||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  32619351 ccgtgagcttaactcagttgttaaggatattgcatattatatgtaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 32619450  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  32619451 ctctagccactaggctacttgacaaaaa 32619478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 34267620 - 34267493
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | | | |||||||| | ||||||||  | | | |||||||||| |||| | |||||||||| | ||||| | ||| ||    
T  34267620 ccgtgagcttagctcagttggtaggaatattgcatattatatgcaggagctggggttcgaaccccggacacttcacttctccacaattaaattgtgtgag 34267521  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || ||||| ||||||||||||||||||    
T  34267520 ctctagtcactaggctacttgacaaaaa 34267493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 41331148 - 41331101
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    ||||||| ||| ||||||||| | ||||||||||||||||||||||||    
T  41331148 ccgtgagcttagctcagttggcagggacattgcataatttatgcaggg 41331101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 41853998 - 41854045
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    ||||||| ||| ||||||||| | ||||||||||||||||||||||||    
T  41853998 ccgtgagcttagctcagttggcagggacattgcataatttatgcaggg 41854045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 47999781 - 47999908
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | |||| |||  | | | |||||| ||| |||| |||||||||||||| ||||| | ||| ||    
T  47999781 ccgtgagcttagctcagttggtagggatattgcatattatatgtaggagctggggttcgaatcccggacactccacttctccataattaaattgtgtgag 47999880  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || |||||||||||||||| ||||    
T  47999881 ctctagccattaggctacttgaccaaaa 47999908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 2916108 - 2916170
Alignment:
Q  124 ttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacat 186  Q
    ||||||||||||| | ||||| |||||||| |||||| |||| | |||||||||||| |||||    
T  2916108 ttaactcagttggtacggacaatgcataatatatgcaaggtctgggattcgaaccccggacat 2916170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 7876001 - 7876047
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    |||||| ||| ||||||||| | ||||||||||||||||||||||||    
T  7876001 cgtgagcttagctcagttggtagggacattgcataatttatgcaggg 7876047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 221
Target Start/End: Complemental strand, 22610099 - 22609993
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||| |||| ||| |||| | | ||||||||||||||||||||||  |  |||||||||| ||||||  | | || |||||||||||||| ||| |    
T  22610099 tccgtgagcttaattcaattggtaggaacattgcataatttatgcaggggtatggattcgaacctctgacaccctatttatccatatttaaaatgtgtga 22610000  T
Q  215 gttccag 221  Q
    | |||||    
T  22609999 gctccag 22609993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 27788298 - 27788360
Alignment:
Q  144 attgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    |||||||||||||||||||| | | | |||||||||| ||||  ||||||||||| |||||||    
T  27788298 attgcataatttatgcaggggccggggttcgaaccccagacaccccacttctccacatttaaa 27788360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 27791454 - 27791516
Alignment:
Q  144 attgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    |||||||||||||||||||| | | | |||||||||| ||||  ||||||||||| |||||||    
T  27791454 attgcataatttatgcaggggccggggttcgaaccccagacaccccacttctccacatttaaa 27791516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 28800100 - 28800178
Alignment:
Q  129 tcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaa 207  Q
    |||||||| ||||||| | ||||||||||| |||| ||| | |||||||  ||||||  ||||||||||| ||||||||    
T  28800100 tcagttggtatggacaatccataatttatgtaggggcaggggttcgaacttctgacaccccacttctccacatttaaaa 28800178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 38889562 - 38889480
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    ||||||| ||||||||||||| | ||| |||||||| | ||||||||| | | | |||| ||||| |||| ||||||||||||    
T  38889562 ccgtgagcttaactcagttggtagggatattgcatattatatgcaggggctgaggttcgtaccccagacactccacttctcca 38889480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 18677027 - 18677072
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    ||||||||||||||||||| |||||| ||||||| | |||||||||    
T  18677027 gtgagtttaactcagttggtatggacgttgcatattatatgcaggg 18677072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 21066887 - 21066976
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||| ||||||||| | ||| |||||||| | |||| |||| | | | |||||||||| |||||  |||||||||| ||||||    
T  21066887 ccgtgagtttagctcagttggtagggatattgcatattatatgtaggggccggggttcgaaccccggacatctcacttctccacatttaa 21066976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 27425113 - 27425158
Alignment:
Q  140 ggacattgcataatttatgcagggtcagcgattcgaacccctgaca 185  Q
    |||||||||||||||||||||||| ||| | |||||||||| ||||    
T  27425113 ggacattgcataatttatgcaggggcagtggttcgaaccccggaca 27425158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 30388575 - 30388494
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    |||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| ||||||||||||    
T  30388575 cgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccagacactccacttctcca 30388494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 37411804 - 37411759
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    ||||||||| |||| |||| | ||||||||||||||||||||||||    
T  37411804 gtgagtttagctcaattggtagggacattgcataatttatgcaggg 37411759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 2434785 - 2434658
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||| ||| || |||||| | ||||| || ||||||||||| ||||  | | ||||||||||||||| |||| ||||| | ||||||| | ||| |    
T  2434785 tccgtgagcttagcttagttgg-agggacaatgtataatttatgcggggttgggggttcgaacccctgacactccatttctctacatttaaactgtgtga 2434687  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
      ||||| |||||| |||||||| |||||    
T  2434686 actccagccattagactacttgaaaaaaa 2434658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 24508882 - 24508954
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| ||||||||||||||||| | ||||| | ||| || || || || |||||||||||| |||||    
T  24508882 ttcgaaccccggacattccacttctccacaattaaattgtgtgagctctagccactaggctacttgaaaaaaa 24508954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 29625923 - 29626041
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagt 216  Q
    |||||| ||||||||||||| | ||| |||||||| | ||||||| | | | |||||||||||| |||| |||||||||| ||| || || | ||| |||    
T  29625923 cgtgagcttaactcagttggtagggatattgcatattatatgcagag-ccgggattcgaacccc-gacactccacttctctataatttaattgtgtgagt 29626020  T
Q  217 tccagtcattaggctacttga 237  Q
    || || ||||| |||||||||    
T  29626021 tctagccattatgctacttga 29626041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 35835713 - 35835641
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||| | |||| |||||||||||| | ||||| | ||| || ||||| || ||||||||||||||||||    
T  35835713 ttcgaacctcagacactccacttctccacaattaaattgtgtgagctccagccactaggctacttgacaaaaa 35835641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 35950129 - 35950256
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagg-gtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    ||||||| ||| ||||||||| | ||| |||||||| | |||||||| ||| | | |||||||||| |||| |||||||||||| | ||||| | ||| |    
T  35950129 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcgggg-ttcgaaccccggacactccacttctccacaattaaattgtgtga 35950227  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || || ||||||||||||| ||||    
T  35950228 gctctagccactaggctacttgaccaaaa 35950256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 40705890 - 40705962
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||| |||||||| ||| | ||||| | ||| || || ||| ||||||||||||||||||||    
T  40705890 ttcgaaccccggacactccacttcgccacaattaaattgtgtgagctctagttattaggctacttgacaaaaa 40705962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 48674632 - 48674512
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||||||||||||||||  | ||| |||||||  | |||||||||   | | ||| |||||| |||| |||||||||||||| ||||| | ||| |    
T  48674632 tccgtgagtttaactcagttgataaggatattgcattttatatgcaggggttggggttcaaaccccggacactccacttctccataattaaattgtgtga 48674533  T
Q  215 gttccagtcattaggctactt 235  Q
    | || ||||| ||| ||||||    
T  48674532 gctctagtcactagactactt 48674512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 624481 - 624573
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaat 208  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||||| ||| | |||||||||||||||  ||||||||||| |||||||||    
T  624481 ccgtgagcttaactcagttggtaaggacattgcataatttatgcaggggcaggggttcgaacccctgacaccccacttctccacatttaaaat 624573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 118 - 241
Target Start/End: Complemental strand, 55260380 - 55260257
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagtt 217  Q
    ||||| ||| || |||||| | ||||||||||||||||||| |||| ||| | |||||||| |||||| |||||||||||| ||||||||||||| ||||    
T  55260380 gtgagcttagcttagttggtagggacattgcataatttatgtaggggcagaggttcgaacctctgacactccacttctccacatttaaaatatgtgagtt 55260281  T
Q  218 ccagtcattaggctacttgacaaa 241  Q
      ||||| || |||||||||||||    
T  55260280 atagtcactaagctacttgacaaa 55260257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 11294908 - 11294817
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    |||||||| |||||||| |||| | |||||||||||||||||||||||| | | | |||||||||| ||||  ||||||||||| |||||||    
T  11294908 tccgtgagcttaactcaattggcagggacattgcataatttatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaa 11294817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 51890798 - 51890887
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||| | |||||||||||||||||||||||| | | | |||||||||| ||||  ||||||||||| ||||||    
T  51890798 ccgtgagcttagctcagttggcagggacattgcataatttatgcaggggccggggttcgaaccccggacaccccacttctccacatttaa 51890887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 42231513 - 42231640
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||||||||||||| | | | |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  42231513 ccgtgagcttaactcagttggtaggaatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 42231612  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || ||||| ||||||||||||||||||    
T  42231613 ctctagtcactaggctacttgacaaaaa 42231640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 246
Target Start/End: Original strand, 45849048 - 45849178
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| ||||||||||| | |   |||||||||  |||| |||||||||||| | || || | ||| ||    
T  45849048 ccgtgagcttagctcagttggtagggatattgcatattttatgcaggggctggagttcgaaccctggacactccacttctccacaatttaattgtgtgag 45849147  T
Q  216 ttccagtcattaggctacttgacaaaaataa 246  Q
    ||| || || |||||||||||||||||||||    
T  45849148 ttctagccactaggctacttgacaaaaataa 45849178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 31852350 - 31852439
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||| | |||||||| |||||||||||| || | | | |||||||||| ||||  ||||||||||||||||||    
T  31852350 ccgtgagcttagctcagttggcagggacattgtataatttatgcaagggccgaggttcgaaccccggacaccccacttctccatatttaa 31852439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 49264527 - 49264616
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||||||||||| | |  |||||||||||| |||||||||| | | | |||||||||| ||||  ||||||||||| ||||||    
T  49264527 ccgtgagtttaactcagttagcagagacattgcataacttatgcaggggccgaggttcgaaccccggacaccccacttctccacatttaa 49264616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 23924933 - 23924853
Alignment:
Q  124 ttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatattta 204  Q
    |||||||| |||| | |||||||||||||||||||||||| | | | |||||||||| |||| | |||||||||| |||||    
T  23924933 ttaactcaattggtagggacattgcataatttatgcaggggccggggttcgaaccccggacacttcacttctccacattta 23924853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 46562699 - 46562771
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    ||||||| || ||||  |||||||||||||||||||||||||||| || | ||| ||| ||||||||||||||    
T  46562699 ttcgaactccggacaccccacttctccatatttaaaatatgtaagctctaatcactagactacttgacaaaaa 46562771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 3036124 - 3035997
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||||||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| ||||  ||||||||||| | ||||| | ||| ||    
T  3036124 ccgtgagcttaactcagttggtagggatattgcatattatatgcaggggccgaggttcgaaccccggacaccccacttctccacaattaaattgtgtgag 3036025  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  3036024 ctctagccactaggctacttgaccaaaa 3035997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 39023176 - 39023303
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | |||||||||   | | |||||||||  |||| |||||||||||| | || || | ||||||    
T  39023176 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccctggacactccacttctccacaatttaattgtgtaag 39023275  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
    ||| || || ||||||||||||||||||    
T  39023276 ttctagccactaggctacttgacaaaaa 39023303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 48569245 - 48569118
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| |||||||||||| | || || | ||| ||    
T  48569245 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaaccccagacactccacttctccacaatttaattgtgtgag 48569146  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  48569145 ctctagccactaggctacttgacaaaaa 48569118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 42044116 - 42044026
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||||| ||| ||||||||| |  ||||||||||||||||||||||| | | | || ||||||| ||||  ||||||||||| ||||||    
T  42044116 tccgtgagcttagctcagttggcagagacattgcataatttatgcaggggccgaggtttgaaccccggacaccccacttctccacatttaa 42044026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 32293109 - 32293198
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||  | ||||||||||||||||||||||||   | | || ||||||  ||||||||||||||||| ||||||    
T  32293109 ccgtgagcttagctcagttgataaggacattgcataatttatgcaggggtcggggttagaaccctggacattccacttctccacatttaa 32293198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 45139950 - 45139861
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||| | |||||||| ||||||||||||||| | | | |||||||||| ||||   |||||||||| ||||||    
T  45139950 ccgtgagcttagctcagttggtagggacattgtataatttatgcaggggccggggttcgaaccccggacacctcacttctccacatttaa 45139861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 55055917 - 55056006
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||| | ||||| |||||| ||||||||||| | | | |||||||||| ||||  ||||||||||| ||||||    
T  55055917 ccgtgagcttagctcagttggtagggacaatgcatattttatgcaggggccgaggttcgaaccccggacacgccacttctccacatttaa 55056006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 8564172 - 8564259
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgca-gggtcagcgattcgaacccctgacattccacttctccatattt 203  Q
    ||||||||||| |||| |||| |||||||||||||||||||| || ||||||| | |||||||| | ||||| ||| ||||||| ||||    
T  8564172 ccgtgagtttagctcaattggcatggacattgcataatttatacaggggtcagag-ttcgaacctcggacatcccatttctccacattt 8564259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 36099197 - 36099125
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| ||||  ||||||||||| ||||||||| ||| || ||||| || |||||||| |||||||||    
T  36099197 ttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctacctgacaaaaa 36099125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 43627329 - 43627241
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||  |||||||  || |||||||||||||||||||||||   | | ||| |||||  |||| |||||||||||||||||||    
T  43627329 cgtgagtttagttcagttgatatagacattgcataatttatgcaggggtcggggttcaaaccctggacactccacttctccatatttaa 43627241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 50376717 - 50376614
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagt 216  Q
    |||||||||||||||||||| |  ||||||||||||| |||||||||  || | ||||||||||  ||| | ||||| |||| ||||||||| ||| ||     
T  50376717 cgtgagtttaactcagttggtagagacattgcataatatatgcaggggaaggggttcgaaccccaaacacttcactt-tccacatttaaaatgtgtgagc 50376619  T
Q  217 tccag 221  Q
    |||||    
T  50376618 tccag 50376614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 3847682 - 3847809
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | ||||| |||| |||| |||||||||||| | ||||| | ||| ||    
T  3847682 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgatccccggacactccacttctccacaattaaattgtgtgag 3847781  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
    ||| || || ||||||||||||| ||||    
T  3847782 ttctagccactaggctacttgaccaaaa 3847809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 4590247 - 4590374
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||||||| ||||||||| | ||| |||||||| | ||| ||||| | | | |||||||||| |||| |||||||||||| | || || | ||| ||    
T  4590247 ccgtgagtttagctcagttggtagggatattgcatattatatacaggggctgaggttcgaaccccagacactccacttctccacaatttaattgtgtgag 4590346  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     |  || || ||||||||||||||||||    
T  4590347 ctttagccactaggctacttgacaaaaa 4590374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 15604109 - 15603982
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | |||  ||||||  | |||||||||   | |||||||||||| |||| |||||||||||| | || || ||||| ||    
T  15604109 ccgtgagcttagctcagttggtagggatgttgcattttatatgcaggggtcgggattcgaaccccggacactccacttctccacaatttaattatgtgag 15604010  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
    ||| || || || |||||||||||||||    
T  15604009 ttctagccactaagctacttgacaaaaa 15603982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 26250648 - 26250695
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    |||||||  |||||||||||| | ||||||||||||||||||||||||    
T  26250648 ccgtgagcataactcagttggtagggacattgcataatttatgcaggg 26250695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 33933808 - 33933681
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | |||||||||||||| ||||||||| | | | ||||| |||  ||||  ||||||||||| |||||| || ||| ||    
T  33933808 ccgtgagcttagctcagttggtagggacattgcataatatatgcaggggccggggttcgacccctggacaccccacttctccacatttaatatgtgtgag 33933709  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     |  || || ||||||||||||| ||||    
T  33933708 ctatagccactaggctacttgaccaaaa 33933681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 40051623 - 40051750
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | |||| ||||  || | |||||||||| ||||  ||||||||||| | ||||| | ||| ||    
T  40051623 ccgtgagcttagctcagttggtagggatattgcatattatatgtaggggtaggggttcgaaccccagacaccccacttctccacaattaaattgtgtgag 40051722  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  40051723 ctctagccactaggctacttgacaaaaa 40051750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 43147453 - 43147326
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  43147453 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 43147354  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  43147353 ctctagccactaggctacttgaccaaaa 43147326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 43596896 - 43597023
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  43596896 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 43596995  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  43596996 ctctagccactaggctacttgaccaaaa 43597023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 45112180 - 45112054
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||||| ||||| | ||| ||    
T  45112180 ccgtgagcttacctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccataattaaattgtgtgag 45112081  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  45112080 ctctag-cactaggctacttgaccaaaa 45112054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 46105536 - 46105663
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  46105536 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 46105635  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     |  || |||||||||||||||| ||||    
T  46105636 ctatagccattaggctacttgaccaaaa 46105663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 46775099 - 46774972
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  46775099 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 46775000  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  46774999 ctctagccactaggctacttgaccaaaa 46774972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 3784913 - 3785002
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    ||||||| ||| |||| |||| | ||| |||||||||||||||||||||||| | ||||||||||  |||   |||||||||| |||||||    
T  3784913 ccgtgagcttagctcaattggtagggatattgcataatttatgcagggtcag-ggttcgaaccccgaacaccacacttctccacatttaaa 3785002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 29922388 - 29922475
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaa 207  Q
    ||||||||||||||||||| | ||| ||||||||  |||||||||  | | ||||| |||| | ||| | ||||||||||||||||||||    
T  29922388 gtgagtttaactcagttggtaaggatattgcata--ttatgcaggagctgtgattcaaacctcagacgtcccacttctccatatttaaaa 29922475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 40486470 - 40486532
Alignment:
Q  144 attgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    |||||||||||||||||||| | | | |||||||||| |||| ||||||||| || |||||||    
T  40486470 attgcataatttatgcaggggccggggttcgaaccccggacactccacttcttcacatttaaa 40486532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 627049 - 626924
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagtt 217  Q
    ||||||||| ||||||||| | ||| |||||||| | |||||| |  | | | |||||||||| |||| |||||||||||| | ||||| | ||| || |    
T  627049 gtgagtttagctcagttggtagggatattgcatattatatgcaagagctggggttcgaaccccggacactccacttctccacaattaaattgtgtgagct 626950  T
Q  218 ccagtcattaggctacttgacaaaaa 243  Q
    | |  || ||||||||||||||||||    
T  626949 ctaaccactaggctacttgacaaaaa 626924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 6171030 - 6170949
Alignment:
Q  124 ttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||||| |||| | ||||||||||||||||||| |||| | | | |||||||| | |||| || ||||||||| ||||||    
T  6171030 ttaactcaattggtagggacattgcataatttatgtaggggctggggttcgaacctcagacactctacttctccacatttaa 6170949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 43722764 - 43722805
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatg 158  Q
    |||||||||||||||||||| ||||||| |||||||| ||||    
T  43722764 cgtgagtttaactcagttggtatggacaatgcataatatatg 43722805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 46998435 - 46998310
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagtt 217  Q
    ||||| ||| ||||||||| ||| | |||| ||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| || |    
T  46998435 gtgagcttagctcagttggtatgaatattgtatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagct 46998336  T
Q  218 ccagtcattaggctacttgacaaaaa 243  Q
    | || |||||| ||||||||||||||    
T  46998335 ctagccattagactacttgacaaaaa 46998310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 5305024 - 5304952
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||| |||||||||||| | ||||| | ||| || || || || ||||||||||||||||||    
T  5305024 ttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 5304952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 7513395 - 7513323
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||| |||||||||||| |||||||||  || || ||||  ||||||||||| |||| ||||    
T  7513395 ttcgaaccccggacactccacttctccacatttaaaatgcgtgagctccaaccattaggctacctgaccaaaa 7513323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 12582042 - 12581970
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||| |||||||||||| | ||||| | ||| || || || || ||||||||||||||||||    
T  12582042 ttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttgacaaaaa 12581970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 21380192 - 21380120
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    ||||||||||  ||| |||||||||||| | ||||| | ||| || || || |||||||||||||||||||||    
T  21380192 ttcgaaccccgcacactccacttctccacaattaaattgtgtgagctctagccattaggctacttgacaaaaa 21380120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 238
Target Start/End: Complemental strand, 35851768 - 35851650
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagtt 217  Q
    ||||| ||||||||||||| | |||||||||||||| |||| ||||  || | || |||||||| ||| ||| |||||||| ||||||||| ||  || |    
T  35851768 gtgagcttaactcagttggtagggacattgcataatatatgtaggggtag-ggttagaacccctaacactcc-cttctccacatttaaaatgtgcgagct 35851671  T
Q  218 ccagtcattaggctacttgac 238  Q
    |||| || ||| |||||||||    
T  35851670 ccagccactagactacttgac 35851650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 41137977 - 41137897
Alignment:
Q  128 ctcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaat 208  Q
    ||||||||| | |||||||||||||| |||||||||   | | |||||||| | ||||  |||||||| ||||||||||||    
T  41137977 ctcagttggtagggacattgcataatatatgcaggggttggggttcgaaccacagacaccccacttcttcatatttaaaat 41137897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 43034404 - 43034356
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    |||||| ||||||||||||| ||||||| |||||||| |||||| ||||    
T  43034404 cgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtc 43034356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 46582637 - 46582717
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    ||||||||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| ||||||||||||    
T  46582637 gtgagtttagctcagttggtagggatattgcatattatatgcaggagccgaggttcgaaccccagacactccacttctcca 46582717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 52015492 - 52015536
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgca 160  Q
    ||||||| ||| ||||||||| | |||||||||||||||||||||    
T  52015492 ccgtgagcttagctcagttggcagggacattgcataatttatgca 52015536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 54029609 - 54029681
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||| ||| |||| |||||||||||| | ||||| | ||| || || ||||| ||||||||||||||||||    
T  54029609 ttcgaatcccggacactccacttctccacaattaaattgtgtgagctctagtcactaggctacttgacaaaaa 54029681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 54215817 - 54215889
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| ||||  ||||||||||| ||||||||||||| || || || |||||| |||| |||| ||||    
T  54215817 ttcgaaccccagacaccccacttctccacatttaaaatatgtgagctctagccattagactacctgaccaaaa 54215889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 13059246 - 13059119
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||||| |||||||||||||||||| ||| | |||||||||||||||  ||||||||||| ||||||||| |||  |    
T  13059246 ccgtgagcttagctcagttggtagggacaatgcataatttatgcaggggcaggggttcgaacccctgacaccccacttctccacatttaaaatgtgtgtg 13059147  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     ||||| || ||||||||||||| ||||    
T  13059146 ctccagccactaggctacttgaccaaaa 13059119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 42023415 - 42023532
Alignment:
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttc 218  Q
    |||| ||| ||||||||| | ||||||||||||||||||||||||  || | || ||||||||||||| ||||||||||| ||||||||||||| || ||    
T  42023415 tgagcttagctcagttggta-ggacattgcataatttatgcaggggtagaggtttgaacccctgacatcccacttctccacatttaaaatatgtgagctc 42023513  T
Q  219 cagtcattaggctacttga 237  Q
    ||  |||||||||||||||    
T  42023514 caaccattaggctacttga 42023532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 24517308 - 24517423
Alignment:
Q  128 ctcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcatta 227  Q
    ||||||||| | ||||||||||| |||||||||||  ||| | |||||||||||  ||| |||||||| |||||||||||| ||| |||| ||| |||||    
T  24517308 ctcagttggtagggacattgcatgatttatgcaggagcaggggttcgaacccctaccatcccacttctgcatatttaaaatgtgtgagtttcagccatta 24517407  T
Q  228 ggctacttgacaaaaa 243  Q
    | ||||||||||||||    
T  24517408 gactacttgacaaaaa 24517423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 13105094 - 13105219
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagtt 217  Q
    ||||| ||||||||||||| | ||||| |||||||| |||||| || | | | |||||||| | ||||  ||||||||||| ||||||||| ||| || |    
T  13105094 gtgagattaactcagttggtagggacaatgcataatatatgcaagggccggggttcgaacctcagacaccccacttctccacatttaaaatgtgtgagct 13105193  T
Q  218 ccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||||||||||||||    
T  13105194 ccagtcattatgctacttgacaaaaa 13105219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 481012 - 481101
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||| | |||||||||||||||||||||||| | ||| |||||||||| ||||  ||||||||||| ||||||    
T  481012 ccgtgagcttagctcagttggtagggacattgcataatttatgcaggggccgcggttcgaaccccggacaccccacttctccacatttaa 481101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 38283124 - 38283214
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||||||||||||||||||| | |||||||  ||||||||||||||| | | | |||||||||| ||||  ||||||||||| ||||||    
T  38283124 tccgtgagtttaactcagttggcagggacattatataatttatgcaggggccggggttcgaaccccagacaccccacttctccacatttaa 38283214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 36358961 - 36359092
Alignment:
Q  109 tatgtgtccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaat 208  Q
    ||||| |||||||| |||||| |||||| | ||| |||||||||||||||| ||| ||| |||||||||||||||||   ||||||| ||  ||||||||    
T  36358961 tatgtctccgtgagcttaacttagttggtagggatattgcataatttatgc-ggggcagggattcgaacccctgacaccgcacttcttcacctttaaaat 36359059  T
Q  209 atgtaagttccagtcattaggctacttgacaaa 241  Q
     ||| || || || || ||| ||||||||||||    
T  36359060 gtgtgagctctagccactagactacttgacaaa 36359092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 117 - 243
Target Start/End: Complemental strand, 17499158 - 17499032
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagt 216  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||  ||| | ||| ||||  |||||  ||||||| ||| ||||||||| ||| ||     
T  17499158 cgtgagtttgactcagttggtagggacattgcataatttatgcaggagcaggggttcaaaccattgacaccccacttccccacatttaaaatgtgtcagc 17499059  T
Q  217 tccagtcattaggctacttgacaaaaa 243  Q
    || || || ||| ||||||||| ||||    
T  17499058 tctagccactagactacttgaccaaaa 17499032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 241
Target Start/End: Complemental strand, 8034481 - 8034356
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||||||||||||| | ||| |||||||| | ||||||||| | | | ||||||| || ||||  ||||||||||| | ||||| | ||| ||    
T  8034481 ccgtgagcttaactcagttggtagggatattgcatattatatgcaggggccggggttcgaacaccagacaccccacttctccacaattaaattgtgtgag 8034382  T
Q  216 ttccagtcattaggctacttgacaaa 241  Q
    ||| || || ||||||||||||||||    
T  8034381 ttctagccactaggctacttgacaaa 8034356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 31451027 - 31450899
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||| ||||||||||||| | ||| |||||||| | ||||||||  | | | ||||||| || |||| |||||||||||| | ||||| | ||| |    
T  31451027 tccgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaactccggacactccacttctccacaattaaattgtgtga 31450928  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || || ||||||||||||||||||    
T  31450927 gctctagccactaggctacttgacaaaaa 31450899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 22202713 - 22202760
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagg 162  Q
    |||||||| ||||||||||||| | |||||||||||||||||||||||    
T  22202713 tccgtgagcttaactcagttggtagggacattgcataatttatgcagg 22202760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 37717364 - 37717491
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||||||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  37717364 ccgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 37717463  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  37717464 ctctagccactaggctacttgaccaaaa 37717491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 43186855 - 43186981
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagg-gtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    |||||||||| ||||||||| | ||| |||||||| | |||||||| | ||| |||||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  43186855 cgtgagtttagctcagttggtagggatattgcatattatatgcaggagccag-gattcgaaccccggacactccacttctccacaattaaattgtgtgag 43186953  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  43186954 ctctagccactaggctacttgaccaaaa 43186981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 12770372 - 12770458
Alignment:
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||| ||| ||||||||  | |||||||||||||||||||||||| | | | |||||||||| ||||  ||||||||||| ||||||    
T  12770372 tgagcttagctcagttgatagggacattgcataatttatgcaggggccggggttcgaaccccggacaccccacttctccacatttaa 12770458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 8183376 - 8183437
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggcta 232  Q
    |||||||||| ||||  ||||||||||||||||||||| ||| || ||||| ||||||||||    
T  8183376 ttcgaaccccagacaacccacttctccatatttaaaatgtgtgagctccagccattaggcta 8183437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 204
Target Start/End: Original strand, 10083163 - 10083252
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatattta 204  Q
    |||||||| ||||||||||||| | ||| |||||||| | |||||||||   | | |||||||||| ||||  |||||||||||||||||    
T  10083163 tccgtgagcttaactcagttggtagggatattgcatattatatgcaggggtcgaggttcgaaccccggacaccccacttctccatattta 10083252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 41458297 - 41458386
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    |||||| ||||||||||||| | ||| |||||||| | ||||||||| | | | |||||||| | |||| |||||||||||| |||||||    
T  41458297 cgtgagcttaactcagttggtagggatattgcatattatatgcaggggctgggtttcgaacctcggacactccacttctccacatttaaa 41458386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 2787151 - 2787023
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| |    
T  2787151 tccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtga 2787052  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || || ||||||||||||| ||||    
T  2787051 gctctagccactaggctacttgaccaaaa 2787023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 6447188 - 6447236
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    |||||||||||||||||||| ||||||| |||||||| |||||| ||||    
T  6447188 cgtgagtttaactcagttggtatggacaatgcataatatatgcaaggtc 6447236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 14342574 - 14342526
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    |||||||| ||||||||||||| |  |||||||||||||||||||||||    
T  14342574 tccgtgagcttaactcagttggtagagacattgcataatttatgcaggg 14342526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 15856574 - 15856486
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||| ||||||||||||| | |||||||||||||||||| ||||| | | | ||| |||| | ||||  ||||||||||| ||||||    
T  15856574 cgtgagcttaactcagttggtagggacattgcataatttatacagggaccggggttcaaacctcggacaccccacttctccacatttaa 15856486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 37669742 - 37669814
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||| |||||||||||| | ||||| | ||| || || |||||||||||||||| |||||||    
T  37669742 ttcgaaccccagacactccacttctccacaattaaattgtgtcagctctagtcattaggctacttaacaaaaa 37669814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 37708747 - 37708819
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| ||||| ||||||||||| ||||||||| ||| || ||||| || |||||||| |||| ||||    
T  37708747 ttcgaaccccggacatcccacttctccacatttaaaatgtgtgagctccagccactaggctacctgaccaaaa 37708819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 257540 - 257667
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| || ||||  | ||||||||| | | | |||||||||| ||||||||||||||||| | ||||| | ||| ||    
T  257540 ccgtgagcttagctcagttggtagggatatcgcattttatatgcaggggccgaggttcgaaccccggacattccacttctccacaattaaattgtgtgag 257639  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  257640 ctctagccactaggctacttgaccaaaa 257667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 658380 - 658253
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| || ||||  | ||||||||| | | | |||||||||| ||||||||||||||||| | ||||| | ||| ||    
T  658380 ccgtgagcttagctcagttggtagggatatcgcattttatatgcaggggccgaggttcgaaccccggacattccacttctccacaattaaattgtgtgag 658281  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  658280 ctctagccactaggctacttgaccaaaa 658253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 844116 - 843989
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| || ||||  | ||||||||| | | | |||||||||| ||||||||||||||||| | ||||| | ||| ||    
T  844116 ccgtgagcttagctcagttggtagggatatcgcattttatatgcaggggccgaggttcgaaccccggacattccacttctccacaattaaattgtgtgag 844017  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  844016 ctctagccactaggctacttgaccaaaa 843989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 6851092 - 6851005
Alignment:
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    |||| |||||||| |||| |  |||||||||||||||||||||||  || |||||||||||| ||||    ||||||||| |||||||    
T  6851092 tgagcttaactcaattggtagagacattgcataatttatgcaggggtagggattcgaaccccggacaccttacttctccacatttaaa 6851005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 16449126 - 16449253
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | |||||||||   | | |||||||||| |||| |||||||||||| | || || | ||| ||    
T  16449126 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggttggggttcgaaccccagacactccacttctccacaatttaattgtgtgag 16449225  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  16449226 ctctagccactaggctacttgacaaaaa 16449253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 33182600 - 33182678
Alignment:
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    |||||||||||||||||| |  |||||| | ||||||||||||| |||| | |||||| |||| |||| |||||||||||    
T  33182600 tgagtttaactcagttggcagagacatttcttaatttatgcaggatcagaggttcgaa-ccctaacatcccacttctcca 33182678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 374
Target Start/End: Original strand, 34986260 - 34986324
Alignment:
Q  306 accaaaataaacttatattatttcattcatttataacaatagttgtaatgtaagatagaatcaaatcaa 374  Q
    ||||||||||||||||||||||||||||    |||||||||||| |||   ||||| ||||||||||||    
T  34986260 accaaaataaacttatattatttcattc----ataacaatagttataacacaagatggaatcaaatcaa 34986324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 43284035 - 43283908
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||||||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||| ||||||| | ||||| | ||| ||    
T  43284035 ccgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccatttctccacaattaaattgtgtgag 43283936  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||| ||||||||||||||    
T  43283935 ctctagccactagactacttgacaaaaa 43283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 243
Target Start/End: Complemental strand, 10200749 - 10200623
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagt 216  Q
    |||||| ||| ||||||||| |  || |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||||| ||||| | ||| ||     
T  10200749 cgtgagcttagctcagttggtagagatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccataattaaattgtgtgagc 10200650  T
Q  217 tccagtcattaggctacttgacaaaaa 243  Q
    |  || || ||||||||||||||||||    
T  10200649 tatagccactaggctacttgacaaaaa 10200623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 238
Target Start/End: Complemental strand, 10736943 - 10736821
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  10736943 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 10736844  T
Q  216 ttccagtcattaggctacttgac 238  Q
     || || || |||||||||||||    
T  10736843 ctctagccactaggctacttgac 10736821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 26022248 - 26022330
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| ||||||||||||    
T  26022248 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccagacactccacttctcca 26022330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 26796960 - 26797006
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    |||||||||| ||||||||| | |||||||||||| |||||||||||    
T  26796960 cgtgagtttagctcagttggtagggacattgcatattttatgcaggg 26797006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 38344051 - 38344177
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagt 216  Q
    |||||| ||||||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||     
T  38344051 cgtgagcttaactcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccagacactccacttctccacaattaaattgtgtgagc 38344150  T
Q  217 tccagtcattaggctacttgacaaaaa 243  Q
    || || || ||| ||||||||| ||||    
T  38344151 tctagccactagactacttgaccaaaa 38344177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 43856451 - 43856369
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    ||||||| ||||||||||||| | ||| |||||||  | ||||||||| | | | |||||||||| |||| ||||||||||||    
T  43856451 ccgtgagcttaactcagttggtagggatattgcattttatatgcaggggccggggttcgaaccccggacactccacttctcca 43856369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 11231424 - 11231501
Alignment:
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctc 196  Q
    |||| ||| ||||||||  | |||||||||||||||||||||||| | | | |||||||||| ||||  |||||||||    
T  11231424 tgagcttagctcagttgaaagggacattgcataatttatgcaggggccggggttcgaaccccggacaccccacttctc 11231501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 25812254 - 25812189
Alignment:
Q  140 ggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||||||||||| |||||| | | |||||||||| ||||  ||||||||| | ||||||    
T  25812254 ggacattgcataatttatggagggtccggggttcgaaccccagacaccccacttctcaacatttaa 25812189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 12294 - 12167
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcaggg-tcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| |||| | ||| ||||| ||||| | |||||||||| | ||||| | ||| |    
T  12294 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggtcag-gtttctaacccatgacactacacttctccacaattaaattgtgtta 12196  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || ||||| ||| ||||||||||||||    
T  12195 gctctagtcactagactacttgacaaaaa 12167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 7553678 - 7553726
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    |||||||||||||||||||| | ||||| |||||||| |||||| ||||    
T  7553678 cgtgagtttaactcagttggtagggacaatgcataatatatgcaaggtc 7553726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 8265269 - 8265396
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcaggg-tcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| |||| | |||||||||| |||| |||||||||||| | || || | ||| |    
T  8265269 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggtcaggg-ttcgaaccccggacactccacttctccacaatttaattgtgtga 8265367  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || || ||||||||||||| ||||    
T  8265368 gctctagccactaggctacttgaccaaaa 8265396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 9478097 - 9478049
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    ||||||||||| ||||| |||||||||| |||||||| |||||| ||||    
T  9478097 cgtgagtttaattcagtagggatggacaatgcataatgtatgcaaggtc 9478049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 18412564 - 18412604
Alignment:
Q  123 tttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    |||| ||||||||| | ||||||||||||||||||||||||    
T  18412564 tttagctcagttggtagggacattgcataatttatgcaggg 18412604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 18926165 - 18926077
Alignment:
Q  155 tatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    ||||||||| ||| |||||||||||| |||| | |||||||||| | ||||| | ||| || || || |||||| ||||||||| ||||    
T  18926165 tatgcaggggcagggattcgaaccccggacacttcacttctccacaattaaattgtgtgagctctagccattagactacttgaccaaaa 18926077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 19163598 - 19163550
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    |||||| ||| ||||||||| ||||||| ||||||||||||||| ||||    
T  19163598 cgtgagcttagctcagttggtatggacaatgcataatttatgcaaggtc 19163550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 25890471 - 25890391
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    ||||| ||| || |||||| | ||||||||||||||||||||| || | | | |||||||||| ||||  |||||||||||    
T  25890471 gtgagcttagcttagttggtagggacattgcataatttatgcaagggccggggttcgaaccccggacaccccacttctcca 25890391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 29734074 - 29733947
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagg-gtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    ||||||||||||||||||||| | ||| |||| ||| | |||||||| ||| | | |||||||||| || | |||||||||| | | ||||| | ||| |    
T  29734074 ccgtgagtttaactcagttggtaaggatattgtatattatatgcaggagtc-ggggttcgaaccccggatactccacttctctacaattaaattgtgtga 29733976  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || || ||||||||||||||||||    
T  29733975 gctctagccactaggctacttgacaaaaa 29733947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 36035193 - 36035121
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||| | ||||  ||||||||||| ||||||||| ||| || ||||| || |||||||| |||||||||    
T  36035193 ttcgaacctcggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctacctgacaaaaa 36035121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 44053454 - 44053382
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| ||||  ||||||||||| ||||||||| ||| || ||||| || |||||||| |||| ||||    
T  44053454 ttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctacctgaccaaaa 44053382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 7e-22; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 3614147 - 3614022
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagtt 217  Q
    ||||| ||| ||| ||||| | |||||||||||||||||||||||| ||| | |||||||||||||||  ||||||||||||||||  ||| ||| |  |    
T  3614147 gtgagcttagctctgttggtagggacattgcataatttatgcaggggcaggggttcgaacccctgacaccccacttctccatatttgtaatgtgtgatct 3614048  T
Q  218 ccagtcattaggctacttgacaaaaa 243  Q
    ||||||| ||||||||||||| ||||    
T  3614047 ccagtcactaggctacttgaccaaaa 3614022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 19222654 - 19222566
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||| ||||||||||||| | |||||||||||||||||||||||| | | | |||||||||| ||||  ||||||||||| ||||||    
T  19222654 cgtgagcttaactcagttggcagggacattgcataatttatgcaggggccggggttcgaaccccggacaccccacttctccacatttaa 19222566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 24303391 - 24303480
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||| | |||||||||||||||||||||||| | | | |||||||||| ||||  ||||||||||| ||||||    
T  24303391 ccgtgagcttagctcagttggcagggacattgcataatttatgcaggggccggggttcgaaccccggacaccccacttctccacatttaa 24303480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 20887839 - 20887775
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaaccc 179  Q
    |||||||||||| ||||||||| | ||| |||||||||||||||||||| ||| |||||||||||    
T  20887839 tccgtgagtttagctcagttggtagggatattgcataatttatgcaggggcagggattcgaaccc 20887775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 49375751 - 49375624
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||| ||||||||||||| | ||||||| |||||||||||||||| | |   |||||||||| |||| |||||||| ||| |||| || ||||| |    
T  49375751 tccgtgagcttaactcagttggtagggacattacataatttatgcaggggctggcgttcgaaccccggacactccacttcaccacattt-aattatgtga 49375653  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    |||| || |||||| |||||  |||||||    
T  49375652 gttctagccattagcctactaaacaaaaa 49375624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 25938999 - 25938872
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||||||| ||||||||| | ||| |||||||| | ||||||||| | | | ||||||||||  ||| |||||||||||||| || || | ||| ||    
T  25938999 ccgtgagtttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaaccccacacactccacttctccataatttaactgtgtgag 25938900  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  25938899 ctctagccactaggctacttgacaaaaa 25938872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 55383957 - 55383866
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaa 207  Q
    ||||||| ||| || |||||| | | |||||||||||||||||||| | ||| | |||||||||||||||  ||||||||||| ||||||||    
T  55383957 ccgtgagcttagcttagttggtaggaacattgcataatttatgcagaggcaggggttcgaacccctgacaccccacttctccacatttaaaa 55383866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 4227814 - 4227724
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||||||   | | ||||||| || ||||  ||||||||||||| ||||    
T  4227814 tccgtgagtttagctcagttggtagggacattgcataatttatgcaggggtcggggttcgaactccggacaccccacttctccataattaa 4227724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 246
Target Start/End: Original strand, 19999868 - 19999998
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| || | ||||||| | || || | ||| ||    
T  19999868 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaaccccagacactctagttctccacaatttaattgtgtgag 19999967  T
Q  216 ttccagtcattaggctacttgacaaaaataa 246  Q
    ||| ||||| |||||||||||||||||||||    
T  19999968 ttctagtcactaggctacttgacaaaaataa 19999998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 243
Target Start/End: Complemental strand, 25884027 - 25883930
Alignment:
Q  146 tgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||| |||||||||   | | |||||||||| ||||  ||||||||||| ||||||||| ||| || ||||| || ||||||||||||||||||    
T  25884027 tgcataatatatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctacttgacaaaaa 25883930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 44764724 - 44764810
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||| ||| ||||||||| | |||||||||||||||||||||||| |   | |||||||||| |||| |||||||||||| ||||||    
T  44764724 cgtgagcttagctcagttggtagggacattgcataatttatgcaggggc--gggttcgaaccccggacactccacttctccacatttaa 44764810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 53432804 - 53432679
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagtt 217  Q
    ||||||||||||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| ||||  ||||||||||| | ||||| | ||| || |    
T  53432804 gtgagtttaactcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagct 53432705  T
Q  218 ccagtcattaggctacttgacaaaaa 243  Q
    | || || ||||||||||||| ||||    
T  53432704 ctagccactaggctacttgaccaaaa 53432679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 49443489 - 49443366
Alignment:
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttc 218  Q
    |||||||| |||| |||| | |||||||||||||||||||||||| | |   |||||||||| ||||  ||||||||||| |||| |||| ||| || ||    
T  49443489 tgagtttagctcaattggcagggacattgcataatttatgcaggggccggagttcgaaccccggacaccccacttctccacattt-aaatgtgtgagctc 49443391  T
Q  219 cagtcattaggctacttgacaaaaa 243  Q
     || || ||||||||| ||||||||    
T  49443390 tagccactaggctactagacaaaaa 49443366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 9685021 - 9685123
Alignment:
Q  140 ggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgaca 239  Q
    |||||||||||||||||||||||| | | | |||||| |||  ||| ||||||||||||||||| |||| ||| || ||||| || ||||||||| |||     
T  9685021 ggacattgcataatttatgcaggggctggggttcgaatcccgaacactccacttctccatattt-aaatgtgtgagctccagccactaggctactagacc 9685119  T
Q  240 aaaa 243  Q
    ||||    
T  9685120 aaaa 9685123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 18194339 - 18194466
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||||||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  18194339 ccgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 18194438  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  18194439 ctctagccactaggctacttgaccaaaa 18194466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 53752769 - 53752642
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||||||||||||| | ||| || ||||| | ||||||||| |||   |||||||||  |||| |||||||||||| | || || | ||| ||    
T  53752769 ccgtgagcttaactcagttggtagggatatggcatattatatgcaggggcaggagttcgaaccctggacactccacttctccacaatttaattgtgtgag 53752670  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
    ||| || || ||||||||||||||||||    
T  53752669 ttctagccactaggctacttgacaaaaa 53752642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 38949682 - 38949764
Alignment:
Q  123 tttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||| ||||||||| | |||||||||||||||||||||||| | | | ||||||||||  |||  ||||||||||| ||||||    
T  38949682 tttagctcagttggtagggacattgcataatttatgcaggggccggggttcgaaccccgaacaccccacttctccacatttaa 38949764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 238
Target Start/End: Original strand, 39719936 - 39720058
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||||||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| ||||  ||||||||||| | ||||| | ||| ||    
T  39719936 ccgtgagtttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgag 39720035  T
Q  216 ttccagtcattaggctacttgac 238  Q
     || || || |||||||||||||    
T  39720036 ctctagccactaggctacttgac 39720058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 52992120 - 52992039
Alignment:
Q  124 ttaactcagttgggatggacattgcataatttatgc-agggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||||| | ||| |||||||||||||||| |||||| | |||||||||||  ||||  ||||||||||||||||||    
T  52992120 ttaactcagttggtagggatattgcataatttatgcaagggtc-gggattcgaaccctcgacaccccacttctccatatttaa 52992039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 9114084 - 9114137
Alignment:
Q  188 ccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaa 241  Q
    ||||||||||| ||||||||| ||| || |||||||| ||||||||||||||||    
T  9114084 ccacttctccacatttaaaatgtgtgagctccagtcactaggctacttgacaaa 9114137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 5174054 - 5173990
Alignment:
Q  141 gacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||||||||||||||| ||| | ||||||||||  |||  ||||||||||| ||||||    
T  5174054 gacattgcataatttatgcaggggcaggggttcgaaccccgaacaccccacttctccacatttaa 5173990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 46767403 - 46767471
Alignment:
Q  175 aacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||| ||||| ||||||||||| ||||||||| ||| || ||||| || |||||||| |||||||||    
T  46767403 aaccccggacatcccacttctccacatttaaaatgtgtgagctccagccactaggctacctgacaaaaa 46767471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 4139001 - 4139128
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  4139001 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 4139100  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  4139101 ctctagccactaggctacttgaccaaaa 4139128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 9176655 - 9176528
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | |||||| |  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  9176655 ccgtgagcttagctcagttggtagggatattgcatattatatgcaagagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 9176556  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  9176555 ctctagccagtaggctacttgacaaaaa 9176528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 17608388 - 17608261
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| |||||| |||||| | ||| |||||||| | ||||||||| | | | |||||||||  |||| |||||||||||| | || || | ||| ||    
T  17608388 ccgtgagcttaacttagttggtagggatattgcatattatatgcaggggccggggttcgaaccctggacactccacttctccacaatttaattgtgtgag 17608289  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
    ||| || || ||||||||||||| ||||    
T  17608288 ttctagccactaggctacttgaccaaaa 17608261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 22502000 - 22501873
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| |||||||||||| | || || | ||| ||    
T  22502000 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaaccccagacactccacttctccacaatttaattgtgtgag 22501901  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  22501900 ctctagccactaggctacttgaccaaaa 22501873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 28951720 - 28951807
Alignment:
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    |||| |||||||| |||| | |||||||||||||||||||||||| | | | |||||||||| ||||  |||| ||| || |||||||    
T  28951720 tgagcttaactcaattggcaaggacattgcataatttatgcaggggctggggttcgaaccccagacaccccacatcttcacatttaaa 28951807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 32776214 - 32776281
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgaca 185  Q
    ||||| ||| ||||||||| | |||||||||||||||||||||||| | | | |||||||||| ||||    
T  32776214 gtgagcttagctcagttggtagggacattgcataatttatgcaggggccggggttcgaaccccggaca 32776281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 37800680 - 37800553
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  37800680 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 37800581  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  37800580 ctctagccactaggctacttgaccaaaa 37800553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 40933900 - 40933773
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  40933900 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 40933801  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  40933800 ctctagccactaggctacttgaccaaaa 40933773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 45701345 - 45701472
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| || | |||||||||||| | ||||| | ||| ||    
T  45701345 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggatactccacttctccacaattaaattgtgtgag 45701444  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  45701445 ctctagccactaggctacttgacaaaaa 45701472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 47098733 - 47098860
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  47098733 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccagacactccacttctccacaattaaattgtgtgag 47098832  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || || ||||||||| |||||    
T  47098833 ctctagccactaagctacttgataaaaa 47098860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 50496883 - 50496756
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  50496883 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 50496784  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  50496783 ctctagccactaggctacttgaccaaaa 50496756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 52410310 - 52410183
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | |||||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  52410310 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccgggattcgaaccccagacactccacttctccacaattaaattgtgtgag 52410211  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||| ||||||||| ||||    
T  52410210 ctctagccactagactacttgaccaaaa 52410183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 52974122 - 52973995
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||||||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  52974122 ccgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 52974023  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || | ||||||||||| ||||    
T  52974022 ctctagccactgggctacttgaccaaaa 52973995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 43280093 - 43280159
Alignment:
Q  140 ggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    |||||||||||||||||||||||| | | | |||||| ||| ||||  ||||||||||| |||||||    
T  43280093 ggacattgcataatttatgcaggggccggggttcgaatcccggacaccccacttctccacatttaaa 43280159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 53347359 - 53347277
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| ||||||||||||    
T  53347359 ccgtgagcttagctcagttggtagggatattgcatattatatgcagggactggggttcgaaccccagacactccacttctcca 53347277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 12976666 - 12976605
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaa 176  Q
    |||||||||||||||||||||  | ||||| |||||||| |||||| |||| | ||||||||    
T  12976666 tccgtgagtttaactcagttgatagggacaatgcataatatatgcaaggtctgggattcgaa 12976605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 54897317 - 54897443
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||  ||||||||||||| | ||||||||||||||| ||| || |  || ||||||||| | |||||   ||||| |||| |||||||  |||| |    
T  54897317 tccgtgaacttaactcagttggtaaggacattgcataattaatgtagaggtagggattcgaactcttgacacctcacttttccacatttaaa--atgtga 54897414  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    |||| || |||||| ||| ||||||||||    
T  54897415 gttctagccattagactatttgacaaaaa 54897443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 7557596 - 7557548
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    |||||| ||||||||||||| ||||||| |||||||| |||||| ||||    
T  7557596 cgtgagcttaactcagttggtatggacaatgcataatgtatgcaaggtc 7557548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 15085698 - 15085626
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| ||||   |||||||||||||||||||| ||| || ||||| || |||||||| |||| ||||    
T  15085698 ttcgaaccccggacacctcacttctccatatttaaaatgtgtgagctccagccactaggctacctgaccaaaa 15085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 19151589 - 19151661
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||| |||||||||||| | ||||| | ||| || |||| ||||||| ||||||||| ||||    
T  19151589 ttcgaaccccggacactccacttctccacaattaaattttgtgagctccactcattagactacttgaccaaaa 19151661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 19591593 - 19591521
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||| |||||||||||||| ||||| | ||  || || || || ||||||||||||||||||    
T  19591593 ttcgaaccccggacactccacttctccataattaaattgtgagagctctagccactaggctacttgacaaaaa 19591521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 27329946 - 27329874
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| ||||  ||||||||||| ||||||||| ||| || ||||| || |||||||| |||| ||||    
T  27329946 ttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctacctgaccaaaa 27329874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 27397674 - 27397626
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    |||||||||||||||||||| ||||||| || ||||| |||||| ||||    
T  27397674 cgtgagtttaactcagttggtatggacaatgtataatatatgcaaggtc 27397626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 28093352 - 28093396
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgca 160  Q
    |||||||||||| |||||||| ||||||| |||||||| ||||||    
T  28093352 ccgtgagtttaattcagttggtatggacaatgcataatatatgca 28093396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 39709095 - 39709166
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||| |||||||||||| ||||||||| ||| || ||||| || |||| || ||||||||||    
T  39709095 ttcgaacccc-gacactccacttctccacatttaaaatgtgtgagctccagccactaggttaattgacaaaaa 39709166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 48515452 - 48515364
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    ||||| ||||||||||||| | ||| ||| ||||||||||||||||   | | |||||||||| ||||   |||||||||| |||||||    
T  48515452 gtgagcttaactcagttggtagggatattccataatttatgcaggggtcgaggttcgaaccccggacaccacacttctccacatttaaa 48515364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 51879151 - 51879223
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| ||||  ||||||||||| ||||||||| ||| || ||||| || |||||||| |||| ||||    
T  51879151 ttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctacctgaccaaaa 51879223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 51882263 - 51882219
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgca 160  Q
    ||||||| ||||||||||||| ||||||| |||||||| ||||||    
T  51882263 ccgtgagcttaactcagttggtatggacaatgcataatatatgca 51882219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 246
Target Start/End: Original strand, 39777759 - 39777889
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||||||| ||||||||| | |||||||| ||||||||||||| | ||| | || ||||| |||| |   |||||||||| ||||||||| ||  |     
T  39777759 ccgtgagtttagctcagttggtagggacattgtataatttatgcagtgacaggggtttgaacctctgatacctcacttctccacatttaaaatgtgagaa 39777858  T
Q  216 ttccagtcattaggctacttgacaaaaataa 246  Q
    |||||| ||||||||||||||||||||||||    
T  39777859 ttccagccattaggctacttgacaaaaataa 39777889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 39800099 - 39799972
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||||| |||||||||||||||||| ||| |  ||||||||||||||  ||||||||||| ||||||||| ||| ||    
T  39800099 ccgtgagcttagctcagttggtagggacaatgcataatttatgcaggggcaggggctcgaacccctgacaccccacttctccacatttaaaatgtgtgag 39800000  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     | ||| || ||| ||| ||||||||||    
T  39799999 cttcagccactagactatttgacaaaaa 39799972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 17545241 - 17545114
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| |||||||||||||| || || | ||| ||    
T  17545241 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacactccacttctccataatttaattgtgtgag 17545142  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  17545141 ctctagccactaggctacttgacaaaaa 17545114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 32706323 - 32706450
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| ||| |||| | |||| |||  | | |||||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  32706323 ccgtgagcttagctcagttggtagggatattacatattatatggaggagccgggattcgaaccccggacactccacttctccacaattaaattgtgtgag 32706422  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || ||||||||||||||||||||||||    
T  32706423 ctctagtcattaggctacttgacaaaaa 32706450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 24250540 - 24250613
Alignment:
Q  170 attcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    ||||||||||| |||| |||||||||||||| ||||| | ||| || |||||||| ||||||||||||| ||||    
T  24250540 attcgaaccccagacactccacttctccatagttaaattgtgtgagctccagtcactaggctacttgaccaaaa 24250613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 7443364 - 7443467
Alignment:
Q  140 ggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgaca 239  Q
    |||||||| ||||||||||||||| ||| | ||||||||| |||||  ||||||||||| ||||| ||| ||| || ||||  || |||||||| | |||    
T  7443364 ggacattgtataatttatgcaggggcaggggttcgaacccttgacaccccacttctccacatttataatgtgtgagctccaaccactaggctacctaaca 7443463  T
Q  240 aaaa 243  Q
    ||||    
T  7443464 aaaa 7443467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 9835034 - 9835161
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  9835034 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 9835133  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  9835134 ctctagccactaggctacttgacaaaaa 9835161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 5900293 - 5900374
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    ||||||| ||||||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||||||||||||||||    
T  5900293 ccgtgagcttaactcagttggtagggatattgcatattatatgcaggggccg-ggttcgaaccccggacattccacttctcca 5900374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 243
Target Start/End: Original strand, 6167223 - 6167340
Alignment:
Q  128 ctcagttgggatggacattgcataatttatgcagggtcagcgattcgaaccc--ctgacattccacttctccatatttaaaatatgtaagttccagtcat 225  Q
    ||||||||| | |||||||||||||||||||||||| ||| | ||||||| |   |||||   |||||||||| ||||||||| ||| || || || ||     
T  6167223 ctcagttggcagggacattgcataatttatgcaggggcaggggttcgaacacatatgacacctcacttctccacatttaaaatgtgtgagctctagccac 6167322  T
Q  226 taggctacttgacaaaaa 243  Q
    |||||||||| |||||||    
T  6167323 taggctacttaacaaaaa 6167340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 8968749 - 8968877
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| |    
T  8968749 tccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtga 8968848  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || || ||||||||||||| ||||    
T  8968849 gctctagccactaggctacttgaccaaaa 8968877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 6518845 - 6518718
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  6518845 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 6518746  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || |||| |||||||||||||    
T  6518745 ctctagccactaggttacttgacaaaaa 6518718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 8350669 - 8350712
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgca 160  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||    
T  8350669 cgtgagtttaactcagttggcatggacaatgcataatatatgca 8350712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 12463757 - 12463884
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  12463757 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 12463856  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  12463857 ctctagccactaggctacttgaccaaaa 12463884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 21918053 - 21918180
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||  |||| |||||||||||| | ||||| | ||| ||    
T  21918053 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaaccctggacactccacttctccacaattaaattgtgtgag 21918152  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || ||||| ||||||||||||| ||||    
T  21918153 ctctagtcactaggctacttgaccaaaa 21918180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 32505689 - 32505816
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  32505689 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 32505788  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || ||| |||||||||||| ||||    
T  32505789 ctctagccatcaggctacttgaccaaaa 32505816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 35515513 - 35515640
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| | |||||||||| | ||||| | ||| ||    
T  35515513 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacacttcacttctccacaattaaattgtgtgag 35515612  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  35515613 ctctagccactaggctacttgacaaaaa 35515640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 20501397 - 20501443
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    |||||| ||||||||||||| |  |||||||||||||||||||||||    
T  20501397 cgtgagcttaactcagttggtagagacattgcataatttatgcaggg 20501443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 42525401 - 42525483
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    ||||||||||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| ||||||||||||    
T  42525401 ccgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctcca 42525483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 3198328 - 3198417
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||| | |||||||||||||| |||||||||   | | |||||||||| ||||  | ||||||||| ||||||    
T  3198328 ccgtgagcttagctcagttggtagggacattgcataatatatgcaggggttgaggttcgaaccccggacaccctacttctccacatttaa 3198417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 4067983 - 4068072
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||| | ||||| |||||| |||||||||||   | | |||||||||| ||||  ||||||||||| ||||||    
T  4067983 ccgtgagcttagctcagttggtagggacaatgcatattttatgcagggggcgaggttcgaaccccggacaccccacttctccacatttaa 4068072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 24477826 - 24477915
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||| | |||| ||||||||| ||||||||||  | | |||||||| | ||||  ||||||||||| ||||||    
T  24477826 ccgtgagcttagctcagttggtagggacgttgcataatatatgcagggtatgtggttcgaacctcggacaccccacttctccacatttaa 24477915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 28822813 - 28822736
Alignment:
Q  128 ctcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||| | |||||||| ||||||||||||| |   | ||||||||||||  |||  ||||||||||||||||||    
T  28822813 ctcagttggtagggacattgtataatttatgcagagatcgggattcgaaccccgaacaccccacttctccatatttaa 28822736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 41083604 - 41083559
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    ||||||||| ||||||||| |  |||||||||||||||||||||||    
T  41083604 gtgagtttagctcagttggtagagacattgcataatttatgcaggg 41083559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 3741010 - 3741082
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| ||||  ||||||||||| ||||||||| ||| || ||||| || |||||||| |||| ||||    
T  3741010 ttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctccagccactaggctacctgaccaaaa 3741082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 28758485 - 28758441
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagg 162  Q
    |||| ||||| |||||||| | |||||||||||||||||||||||    
T  28758485 gtgactttaattcagttggtagggacattgcataatttatgcagg 28758441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 29154898 - 29154970
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||| |||||||||||| | ||||| | ||| ||||| || || || |||||||||||||||    
T  29154898 ttcgaaccccggacactccacttctccacaattaaattgtgtgagttctagccactacgctacttgacaaaaa 29154970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 36564436 - 36564364
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||| | ||||  |||| |||||||||||||||| ||| || |||||||| || | |||||||||||||    
T  36564436 ttcgaaccacggacaccccacctctccatatttaaaatgtgtgagctccagtcactatgttacttgacaaaaa 36564364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 41651001 - 41650953
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    |||||| ||||||||||||| ||||||| |||||||| |||||| ||||    
T  41651001 cgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtc 41650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 7e-19; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 2997702 - 2997630
Alignment:
Q  140 ggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgt 212  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||  |||| ||||||||||||||||||||    
T  2997702 ggacattgcataatttatgcaggggcaggggttcgaacccctgacaccccacatctccatatttaaaatatgt 2997630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 8741474 - 8741598
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| |||  |||||||| | ||||||| |||||||||||||||| ||| | |||||||||||||||  ||||||||||| ||||| ||| ||| ||    
T  8741474 ccgtgagcttagttcagttggtagggacattacataatttatgcaggggcaggggttcgaacccctgacaccccacttctccacatttataatgtgtgag 8741573  T
Q  216 ttccagtcattaggctacttgacaa 240  Q
     ||||  || |||||||||||||||    
T  8741574 ctccaaccactaggctacttgacaa 8741598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 47469142 - 47469053
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||| | |||||||||||||||||||||||| | | | |||||||||| ||||  ||||||||||| ||||||    
T  47469142 ccgtgagcttagctcagttggcagggacattgcataatttatgcaggggctgaggttcgaaccccggacaccccacttctccacatttaa 47469053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 12613179 - 12613305
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagt 216  Q
    |||||||||| ||||||||| ||| | | |||||||| ||| ||||| | | || ||||||||| ||||  ||||||||| | ||||||||| ||| ||     
T  12613179 cgtgagtttagctcagttggtatgaataatgcataatatatacaggggccgagaatcgaaccccggacaccccacttctctacatttaaaatgtgtgagc 12613278  T
Q  217 tccagtcattaggctacttgacaaaaa 243  Q
    |||| ||| |||||| |||||||||||    
T  12613279 tccaatcactaggctgcttgacaaaaa 12613305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 36666645 - 36666563
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    ||||||| ||| ||||||||| | |||||||||||||||||||||||| | | | |||||||||| ||||  |||||||||||    
T  36666645 ccgtgagcttagctcagttggtagggacattgcataatttatgcaggggccggggttcgaaccccggacaccccacttctcca 36666563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 19564221 - 19564133
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||| ||||||||| | |||||||||||||||||||||||| | | | |||||||| | ||||  ||||||||||| ||||||    
T  19564221 ccgtgagtttagctcagttggcaaggacattgcataatttatgcaggg-ccggggttcgaacctcggacaccccacttctccacatttaa 19564133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 24874972 - 24875061
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||| | ||| ||||||||||||||||| || ||| | |||||||| | ||||  ||||||||||||||||||    
T  24874972 ccgtgagcttagctcagttggtagggatattgcataatttatgcatgggcaggggttcgaacctcggacaccccacttctccatatttaa 24875061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 25036331 - 25036242
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||| ||||||||| | | |||||||||||||||||||||| | | ||||||||||||  |||  ||| ||||||| ||||||    
T  25036331 ccgtgagtttagctcagttggcaggaacattgcataatttatgcaggggccgggattcgaaccccgaacaccccatttctccacatttaa 25036242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 25041543 - 25041454
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||| ||||||||| | | |||||||||||||||||||||| | | ||||||||||||  |||  ||| ||||||| ||||||    
T  25041543 ccgtgagtttagctcagttggcaggaacattgcataatttatgcaggggccgggattcgaaccccgaacaccccatttctccacatttaa 25041454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 34058214 - 34058342
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| |    
T  34058214 tccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccgaggttcgaaccccggacactccacttctccacaattaaattgtgtga 34058313  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || |||||||||||||||| ||||    
T  34058314 gctctagccattaggctacttgaccaaaa 34058342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 1151760 - 1151887
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||| ||||  | | |||||||||||| |||| ||||||||| || | ||||| | ||| ||    
T  1151760 ccgtgagcttagctcagttggtagggatattgcatattatatacaggagccgggattcgaaccccggacactccacttcttcacaattaaattgtgtgag 1151859  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || ||||| ||||||||||||||||||    
T  1151860 ctctagtcactaggctacttgacaaaaa 1151887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 13773169 - 13773296
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||||||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||| ||| |||| |||||||||||| | ||||| | ||| ||    
T  13773169 ccgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaatcccggacactccacttctccacaattaaattgtgtgag 13773268  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  13773269 ctctagccactaggctacttgacaaaaa 13773296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 15390221 - 15390348
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||||||||||||| | ||| |||||||| |  ||||||||   | |||||||||||  |||| |||||||||||| | || || | ||| ||    
T  15390221 ccgtgagcttaactcagttggtagggatattgcatattagatgcaggggttgggattcgaaccctggacactccacttctccacaatttaattgtgtgag 15390320  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
    ||| || || ||||||||||||||||||    
T  15390321 ttctagccactaggctacttgacaaaaa 15390348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 22563387 - 22563514
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| |||||||||||| | || || | ||| ||    
T  22563387 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacactccacttctccacaatttaattgtgtgag 22563486  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  22563487 ctctagccactaggctacttgacaaaaa 22563514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 23991331 - 23991244
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||| || |||||||||| | |||||||||||||||||||||||| | | | |||||||||  ||||  ||||||||||| ||||||    
T  23991331 gtgagcttgactcagttggcagggacattgcataatttatgcaggggccggggttcgaaccctggacaccccacttctccacatttaa 23991244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 24910532 - 24910458
Alignment:
Q  131 agttgggatggacattgcataatttatgcaggg-tcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||| | ||| |||||||||||||||||||| |||| | |||||||||| |||| |||||||||||||||||||    
T  24910532 agttggtagggatattgcataatttatgcaggggtcaggg-ttcgaaccccggacactccacttctccatatttaa 24910458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 34562854 - 34562767
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||| ||||||||||||| | ||| ||| |||||||||| ||||| | | | |||||||||| ||||  ||||||||||||||||||    
T  34562854 gtgagcttaactcagttggtagggatattacataatttatacaggggccgaggttcgaaccccggacaccccacttctccatatttaa 34562767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 43884795 - 43884922
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||||||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||  |||| |||||||||||| | ||||| | ||| ||    
T  43884795 ccgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccctggacactccacttctccacaattaaattgtgtgag 43884894  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
    ||| || || ||| ||||||||||||||    
T  43884895 ttctagccactagactacttgacaaaaa 43884922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 46965741 - 46965868
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||||| ||||| | ||| ||    
T  46965741 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccataattaaattgtgtgag 46965840  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  46965841 ctctagccactaggctacttgaccaaaa 46965868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 11333664 - 11333754
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||||  ||| ||||||||| | |||||||||||||||||||||||| | |   |||||||||| ||||  ||||||||||| ||||||    
T  11333664 tccgtgaacttagctcagttggtagggacattgcataatttatgcaggggccggagttcgaaccccggacaccccacttctccacatttaa 11333754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 11491685 - 11491775
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||||  ||| ||||||||| | |||||||||||||||||||||||| | |   |||||||||| ||||  ||||||||||| ||||||    
T  11491685 tccgtgaacttagctcagttggtagggacattgcataatttatgcaggggccggagttcgaaccccggacaccccacttctccacatttaa 11491775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 10842126 - 10842037
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||| ||| | ||||||||||||||||||||| |||| | |   |||||| ||| |||| |||||||||||||||||||    
T  10842126 ccgtgagcttagctctgttagcatggacattgcataatttatgtaggggctgaagttcgaatcccggacactccacttctccatatttaa 10842037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 40051462 - 40051538
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgc-agggtcagcgattcgaacccctgacattccact 192  Q
    ||||||||||||||| ||||  | |||||||||||||||||||| |||||| | |||||||||||| ||||| |||||    
T  40051462 ccgtgagtttaactcggttgaaaaggacattgcataatttatgcaagggtc-gggattcgaaccccggacatcccact 40051538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 2277754 - 2277882
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| || | |||||||||||| | ||||| | ||| |    
T  2277754 tccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggagactccacttctccacaattaaattgtgtga 2277853  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || || ||||||||||||||||||    
T  2277854 gctctagccactaggctacttgacaaaaa 2277882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 6702577 - 6702704
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagg-gtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    ||||||| ||| ||||||||| | ||| |||||||| | |||||||| ||| | | |||||||||| |||| ||||||||| || | ||||| | ||| |    
T  6702577 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcgggg-ttcgaaccccagacactccacttcttcacaattaaattgtgtga 6702675  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || |||||||||||||||||||||    
T  6702676 gctctagccattaggctacttgacaaaaa 6702704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 8984575 - 8984448
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||| ||||||||||||| | ||| |||||||| | ||||||||  | | | |||||| ||| |||| |||||||||||| | ||||| | ||| |    
T  8984575 tccgtgagcttaactcagttggcagggatattgcatattatatgcaggagccggggttcgaa-cccggacactccacttctccacaattaaattgtgtga 8984477  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || || ||||||||||||||||||    
T  8984476 gctctagccactaggctacttgacaaaaa 8984448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 15595726 - 15595853
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgc-agggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    ||||||| ||| ||||||||| | |||||||||||||| ||||| |||||||| |||| | |||||  |||  | ||||||||| ||||||||| |||||    
T  15595726 ccgtgagcttagctcagttggtagggacattgcataatatatgcaagggtcag-gatttggaccccgaacaaccaacttctccacatttaaaatgtgtaa 15595824  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
      ||| |||| ||||||||| ||| ||||    
T  15595825 tctccggtcactaggctactagaccaaaa 15595853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 1570261 - 1570134
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  1570261 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 1570162  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  1570161 ctctagccactaggctacttgaccaaaa 1570134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 6438133 - 6438006
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  6438133 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 6438034  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  6438033 ctctagccactaggctacttgaccaaaa 6438006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 7166296 - 7166169
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| |||||||||||| | || || | ||| ||    
T  7166296 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaaccccggacactccacttctccacaatttaattgtgtgag 7166197  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  7166196 ctctagccactaggctacttgaccaaaa 7166169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 7180683 - 7180556
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | | | |||||||| | ||||||||| | |   |||||||||| ||||  ||||||||||| | ||||| | ||| ||    
T  7180683 ccgtgaggttagctcagttggtaggaatattgcatattatatgcaggggccggagttcgaaccccggacaccccacttctccacaattaaattgtgtgag 7180584  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || ||||| ||||||||||||||||||    
T  7180583 ctctagtcactaggctacttgacaaaaa 7180556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 10664863 - 10664737
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||| ||| | | |||||||||| |||| |||||||||||| | ||||| | | | ||    
T  10664863 ccgtgagcttagctcagttggtagggatattgcatattatatgcagagtcgggg-ttcgaaccccggacactccacttctccacaattaaattgtatgag 10664765  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  10664764 ctctagccactaggctacttgacaaaaa 10664737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 11215001 - 11215084
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    |||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| ||||||||||||    
T  11215001 tccgtgagcttagctcagttggtagggatattgcatattatatgcaggggctgaggttcgaaccccagacactccacttctcca 11215084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 15819670 - 15819543
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  15819670 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 15819571  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  15819570 ctctagccactaggctacttgaccaaaa 15819543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 16343029 - 16343156
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  16343029 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 16343128  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || || |||||||||||||||    
T  16343129 ctctagccactaagctacttgacaaaaa 16343156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 21265657 - 21265784
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| ||||  ||||||||||| | ||||| | ||| ||    
T  21265657 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgag 21265756  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  21265757 ctctagccactaggctacttgaccaaaa 21265784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 28344932 - 28345003
Alignment:
Q  172 tcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    ||||||||| ||||| ||||||||||| | ||||| ||||| ||||| || || |||||||||||| |||||    
T  28344932 tcgaaccccggacatcccacttctccacaattaaattatgtgagttctagccactaggctacttgataaaaa 28345003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 160
Target Start/End: Original strand, 29935983 - 29936025
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgca 160  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||    
T  29935983 gtgagtttaactcagttggtatggacaatgcataatatatgca 29936025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 31124704 - 31124618
Alignment:
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||| ||| ||||||||| | |||||||||||||||||||||||| | | | ||||||| || || |  ||||||||||| ||||||    
T  31124704 tgagcttagctcagttggcaaggacattgcataatttatgcaggggccggggttcgaactccggataccccacttctccacatttaa 31124618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 204
Target Start/End: Original strand, 44579882 - 44579972
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcga-ttcgaacccctgacattccacttctccatattta 204  Q
    |||||||| ||| ||||||||  |  ||||||| ||||||||||||| ||||| |  |||||||||||||||  ||||||||||| |||||    
T  44579882 tccgtgagcttagctcagttgatagagacattgtataatttatgcagtgtcagggggttcgaacccctgacaccccacttctccacattta 44579972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 45416240 - 45416158
Alignment:
Q  123 tttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||| |||||||| | | |||||||||||||||||||||| | | | |||||| ||| ||||  ||||||||||| ||||||    
T  45416240 tttaattcagttggcaggaacattgcataatttatgcaggggccggggttcgaatcccggacaccccacttctccacatttaa 45416158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 52369599 - 52369725
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagt 216  Q
    |||||||||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||  || | |||||||||||||| ||||| | ||| ||     
T  52369599 cgtgagtttagctcagttggtagggatattgcatattatatgcaggagccgaggttcgaaccctggatactccacttctccataattaaattgtgtgagc 52369698  T
Q  217 tccagtcattaggctacttgacaaaaa 243  Q
    || || || ||| ||||||||||||||    
T  52369699 tctagccactagactacttgacaaaaa 52369725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 41926978 - 41927046
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgaca 185  Q
    ||||||||||||||||||||  | |||||||||||||||||||| ||| | | |||||||| ||| ||||    
T  41926978 ccgtgagtttaactcagttgata-ggacattgcataatttatgctggggctgagattcgaatcccggaca 41927046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 10356245 - 10356197
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    |||||| ||||||||||||| ||||||| |||||||| |||||| ||||    
T  10356245 cgtgagcttaactcagttggtatggacaatgcataatatatgcacggtc 10356197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 18607877 - 18607789
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||| ||| || |||||| | |||||||||||||||||||||||| | | | ||||||||||  |||  ||||||||| | ||||||    
T  18607877 cgtgagcttagctgagttggtagggacattgcataatttatgcaggggctggggttcgaaccccgaacaccccacttctctacatttaa 18607789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 19011355 - 19011483
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||| ||| |||| |||| | ||| |||||||| | ||||||||| | | | |||||||||| || | |||||||||||| | || || | ||| |    
T  19011355 tccgtgagcttagctcaattggtagggatattgcatattatatgcaggggctggggttcgaaccccagatactccacttctccacaatttaattgtgtga 19011454  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || || ||||||||||||||||||    
T  19011455 gctctagccactaggctacttgacaaaaa 19011483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 32594252 - 32594379
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagg-gtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    ||||||| ||| ||||||||| | ||| |||||||| | |||||||| ||| | | |||||||||| |||| |||||||||||| | ||||| | ||| |    
T  32594252 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcgggg-ttcgaaccccggacactccacttctccacaattaaattgtgtga 32594350  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || || ||||||||||||| ||||    
T  32594351 gctctagccactaggctacttgaccaaaa 32594379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 39346993 - 39346921
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||| |||||||||||| | ||||| | ||| ||||| || || ||||||| ||||||||||    
T  39346993 ttcgaaccccggacactccacttctccacaattaaattgtgtgagttctagccactaggctatttgacaaaaa 39346921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 40519613 - 40519485
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagg-gtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    ||||||| ||| ||||||||| | ||| |||||||| | |||||||| | | | | |||||||||| |||| |||||||||||| | ||||| | ||| |    
T  40519613 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccgggggttcgaaccccggacactccacttctccacaattaaattgtgtga 40519514  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || || ||||||||||||| ||||    
T  40519513 gctctagccactaggctacttgaccaaaa 40519485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 49907336 - 49907408
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| ||||| | | ||||||||||||||||| ||| |  ||||| || |||||||||||| |||||    
T  49907336 ttcgaaccccggacatcctatttctccatatttaaaatgtgtgaactccagccactaggctacttgaaaaaaa 49907408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 44558006 - 44558092
Alignment:
Q  118 gtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| | | | |||||||||| ||||  ||||||||||| ||||||    
T  44558006 gtgagtttaactcagttggta-ggacattgcataatttatgcaggggctggggttcgaaccccggacaccccacttctccacatttaa 44558092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 243
Target Start/End: Complemental strand, 2145791 - 2145677
Alignment:
Q  129 tcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattag 228  Q
    |||||||| | |||||||||||||||||||||||| ||| | || ||| ||||||||  ||||||||||| ||||| ||  ||| || ||||| || |||    
T  2145791 tcagttggtagggacattgcataatttatgcaggggcagaggtttgaatccctgacaccccacttctccacatttataacgtgtgagctccagccactag 2145692  T
Q  229 gctacttgacaaaaa 243  Q
    ||||| |||||||||    
T  2145691 gctacctgacaaaaa 2145677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 19281609 - 19281736
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  19281609 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 19281708  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || |||||||||||||||||||||    
T  19281709 ctctagccattaggctacttgacaaaaa 19281736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 44857302 - 44857179
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagt 216  Q
    |||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| |||||||||||||| || || | ||||||     
T  44857302 cgtgagcttagctcagttggtagggatattgcatattatatgcaggggccgaggttcgaaccccggacactccacttctccataatttaattgtgtaagc 44857203  T
Q  217 tccagtcattaggctacttgacaa 240  Q
    || || || |||||||||||||||    
T  44857202 tctagccactaggctacttgacaa 44857179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 35429671 - 35429586
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaat 208  Q
    ||||||| ||| ||||||||| |  ||||||||||||||||||||||||       |||||||||||||| |||||||||||| |||||||||    
T  35429671 ccgtgagcttagctcagttggtagagacattgcataatttatgcagggt-------tcgaacccctgacactccacttctccacatttaaaat 35429586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 20919611 - 20919700
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    ||||||| ||| ||||||||| | |||||||||||||||||||| ||| | | | |||||||||| ||||  ||||||||||| ||||||    
T  20919611 ccgtgagcttagctcagttggtagggacattgcataatttatgctggggccggggttcgaaccccggacaccccacttctccacatttaa 20919700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 18862308 - 18862380
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| |||| |||||||||||| ||||||||| ||| || || || || ||||||||||||||||||    
T  18862308 ttcgaacccccgacactccacttctccacatttaaaatgtgtgagctctagccactaggctacttgacaaaaa 18862380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 33587093 - 33587217
Alignment:
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttc 218  Q
    ||||||||||| |||||| ||| | |||||||| | |||| ||||   | | ||| |||||| ||||  ||||||||||||||||||||||||| || ||    
T  33587093 tgagtttaacttagttggtatgaaaattgcatattatatgtaggggtcgaggttcaaaccccggacaccccacttctccatatttaaaatatgtgagctc 33587192  T
Q  219 cagtcattaggctacttgacaaaaa 243  Q
     ||||| ||| |||||||| |||||    
T  33587193 tagtcactagactacttgagaaaaa 33587217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 43146353 - 43146400
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  43146353 ccgtgagtttaactcagttggtagggatattgcataatttatgcaggg 43146400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 27297176 - 27297266
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | |||||||||||| |||| |||||||||||||| |||||    
T  27297176 ccgtgagcttagctcagttggtagggatattgcatattgtatgcaggagctgggattcgaaccccggacactccacttctccataattaaa 27297266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 238
Target Start/End: Complemental strand, 40535518 - 40535396
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  40535518 ccgtgagcttagctcagttggtacggatattgcatattatatgcaggggccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 40535419  T
Q  216 ttccagtcattaggctacttgac 238  Q
     || || || |||||||||||||    
T  40535418 ctctagccactaggctacttgac 40535396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 1964378 - 1964443
Alignment:
Q  140 ggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||||||||||||||||||||| | | | ||| |||||| ||||  ||||||||||||||||||    
T  1964378 ggacattgcataatttatgcaggggccggggttcaaaccccggacaccccacttctccatatttaa 1964443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 45119777 - 45119649
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcaggg-tcagcgattcgaacccctgacattccacttctccatatttaaaatatgta 213  Q
    ||||||| |||||||||||||| ||| |  || |||| | ||||||||| || | | |||||||| | |||| |||| ||||||||||||||||| ||||    
T  45119777 tccgtgaatttaactcagttggtatgaattttacatattatatgcaggggtcggag-ttcgaacctcggacactccatttctccatatttaaaatgtgta 45119679  T
Q  214 agttccagtcattaggctacttgacaaaaa 243  Q
    || ||| ||||||||  ||||||| |||||    
T  45119678 agctcctgtcattagattacttgagaaaaa 45119649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 32854588 - 32854660
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||| ||||  | ||||||||| ||||||||| ||| || ||||| || ||||||||||||||||||    
T  32854588 ttcgaaccccggacaccctacttctccacatttaaaatgtgtgagctccagccactaggctacttgacaaaaa 32854660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 34125759 - 34125838
Alignment:
Q  128 ctcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaat 208  Q
    ||||||||| | ||||||||||| |||||||||||| | | | ||| |||||||||||  ||||||||||| |||||||||    
T  34125759 ctcagttggtagggacattgcatgatttatgcagggacggaggttcaaacccctgaca-cccacttctccacatttaaaat 34125838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 243
Target Start/End: Original strand, 41509516 - 41509644
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| |    
T  41509516 tccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtga 41509615  T
Q  215 gttccagtcattaggctacttgacaaaaa 243  Q
    | || || || ||||||||||||| ||||    
T  41509616 gctctagccactaggctacttgaccaaaa 41509644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 2256970 - 2257033
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccc 180  Q
    |||||| ||||||||||||| ||||||| |||||||| |||||| |||| | | ||||||||||    
T  2256970 cgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctggggttcgaacccc 2257033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 235
Target Start/End: Complemental strand, 4562821 - 4562702
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||||||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  4562821 ccgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 4562722  T
Q  216 ttccagtcattaggctactt 235  Q
     || || || ||||||||||    
T  4562721 ctctagccactaggctactt 4562702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 17487704 - 17487827
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaa 214  Q
    |||||||  ||| ||||||||| | ||| |||||||| | ||||||| | | | | |||||||||| |||| | |||||||||| | ||||| |  || |    
T  17487704 tccgtgaacttagctcagttggtagggatattgcatattatatgcagtggctggggttcgaaccccggacacttcacttctccacaattaaattgagtga 17487803  T
Q  215 gttccagtcattaggctacttgac 238  Q
    |||| |||||||||||||||||||    
T  17487804 gttctagtcattaggctacttgac 17487827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 10058952 - 10059002
Alignment:
Q  198 atatttaaaatatgtaagttccagtcattaggctacttgacaaaaataatg 248  Q
    ||||||||||| |||||| ||||| || |||||||||||||||||| ||||    
T  10058952 atatttaaaatgtgtaagctccagccactaggctacttgacaaaaaaaatg 10059002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 14663986 - 14664032
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    ||||||||||  |||||||| | ||||||||||||||||||||||||    
T  14663986 cgtgagtttagttcagttggtagggacattgcataatttatgcaggg 14664032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 238
Target Start/End: Complemental strand, 33229002 - 33228880
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| ||||  ||||||||||| | ||||| | ||| ||    
T  33229002 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgag 33228903  T
Q  216 ttccagtcattaggctacttgac 238  Q
     || || || |||||||||||||    
T  33228902 ctctagccactaggctacttgac 33228880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 36182644 - 36182770
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagt 216  Q
    |||||| ||| ||||||||| | ||| |||||||| | ||||||||  ||| | |||||||||| |||| |||||||||||| | ||||| | ||| ||     
T  36182644 cgtgagcttagctcagttggtagggatattgcatattatatgcaggagcaggggttcgaaccccggacactccacttctccacaattaaattgtgtgagc 36182743  T
Q  217 tccagtcattaggctacttgacaaaaa 243  Q
    || |  || ||||||||||||| ||||    
T  36182744 tctaaccactaggctacttgaccaaaa 36182770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 40363141 - 40363051
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||||| ||||||||||||| | ||| |||||||| | |||| ||||   | | |||||||||| |||| || ||||||||||||||||    
T  40363141 tccgtgagcttaactcagttggtagggatattgcatattatatgtaggggtcggggttcgaacccccgacactctacttctccatatttaa 40363051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 3154022 - 3154079
Alignment:
Q  140 ggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcc 197  Q
    |||||||||||||||||||||||| | | | |||||||||  |||| |||||||||||    
T  3154022 ggacattgcataatttatgcagggaccggggttcgaaccctggacactccacttctcc 3154079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 28771580 - 28771649
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgaca 185  Q
    ||||||||||| ||||||||| | ||||| |||||||| |||||| | || ||| |||||||||| ||||    
T  28771580 ccgtgagtttagctcagttggtaaggacaatgcataatatatgcaagatccgcggttcgaaccccggaca 28771649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 44666411 - 44666330
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctcca 198  Q
    |||||||||| |||| |||  | ||| |||||||||| |||||||||   | | |||||||||| |||||||||||||||||    
T  44666411 cgtgagtttagctcaattgacagggatattgcataatatatgcagggatcggggttcgaaccccggacattccacttctcca 44666330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 1500974 - 1501046
Alignment:
Q  128 ctcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccata 200  Q
    ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| |||| ||||||||||||||    
T  1500974 ctcagttggtagggatattgcatattatatgcaggggctggggttcgaaccccagacactccacttctccata 1501046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 3596276 - 3596340
Alignment:
Q  141 gacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaa 205  Q
    |||||||||||||||||||||||   | | |||||||||| ||||  ||||||||||| ||||||    
T  3596276 gacattgcataatttatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaa 3596340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 14518356 - 14518412
Alignment:
Q  187 tccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||||||||||||||||||| ||| || ||||| || |||||||| ||| |||||    
T  14518356 tccacttctccatatttaaaatgtgtgagctccagccactaggctacctgataaaaa 14518412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 243
Target Start/End: Original strand, 15939298 - 15939417
Alignment:
Q  124 ttaactcagttgggatggacattgcataatttatgcag-ggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagt 222  Q
    |||||||| |||| |  ||||||||||||| ||||||| ||| || | ||||||||||  |||  ||||||||||| ||||||||| ||| || |||||     
T  15939298 ttaactcaattggcagagacattgcataatatatgcagaggttaggg-ttcgaaccccgaacaccccacttctccacatttaaaatgtgtgagctccagc 15939396  T
Q  223 cattaggctacttgacaaaaa 243  Q
    || |||||||| |||| ||||    
T  15939397 cactaggctacctgaccaaaa 15939417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 17034791 - 17034863
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||| ||| |||| |||||||||||| | ||||| ||||| || || || || ||||||||||||||||||    
T  17034791 ttcgaatcccggacactccacttctccacaattaaattatgtgagctctagccactaggctacttgacaaaaa 17034863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 17089299 - 17089371
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||| ||| |||| |||||||||||| | ||||| ||||| || || || || ||||||||||||||||||    
T  17089299 ttcgaatcccggacactccacttctccacaattaaattatgtgagctctagccactaggctacttgacaaaaa 17089371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 17560255 - 17560322
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgaca 185  Q
    |||||| ||||||||||||| | | |||||||||||| ||||||| || || |||||||||||| ||||    
T  17560255 cgtgagcttaactcagttggtaagtacattgcataatatatgcagagttag-gattcgaaccccagaca 17560322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 18073799 - 18073871
Alignment:
Q  171 ttcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcattaggctacttgacaaaaa 243  Q
    |||||| ||| |||| |||||||||||| | ||||| | ||| ||||| ||||| ||||||| ||||||||||    
T  18073799 ttcgaatcccggacactccacttctccacaattaaattgtgtgagttctagtcactaggctatttgacaaaaa 18073871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 32190058 - 32190002
Alignment:
Q  129 tcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgaca 185  Q
    |||||||| | |||||||||||||||||||||||| | | | |||||||||| ||||    
T  32190058 tcagttggtagggacattgcataatttatgcaggggccggggttcgaaccccggaca 32190002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 34977203 - 34977251
Alignment:
Q  117 cgtgagtttaactcagttgggatggacattgcataatttatgcagggtc 165  Q
    |||||| ||||||||||||| ||||||| |||||||| |||||| ||||    
T  34977203 cgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtc 34977251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 44920024 - 44920064
Alignment:
Q  124 ttaactcagttgggatggacattgcataatttatgcagggt 164  Q
    ||||||| ||||| | |||||||||||||||||||||||||    
T  44920024 ttaactcggttggtagggacattgcataatttatgcagggt 44920064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 3667 - 3794
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||||||||||||| | ||| |||||||| | ||||||||  |   | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  3667 ccgtgagcttaactcagttggtagggatattgcatattatatgcaggaaccagggttcgaaccccggacactccacttctccacaattaaattgtgtgag 3766  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||||||||    
T  3767 ctctagccactaggctacttgacaaaaa 3794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 15005 - 15053
Alignment:
Q  115 tccgtgagtttaactcagttgggatggacattgcataatttatgcaggg 163  Q
    |||||||| ||| ||||||||| | ||||||||||||||||||||||||    
T  15005 tccgtgagcttagctcagttggtagggacattgcataatttatgcaggg 15053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 8822 - 8948
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||  | ||||||||||| | | ||||||||||  ||| |||| ||||||| | ||||| | ||| ||    
T  8822 ccgtgagcttagctcagttggtagggatattgcattttatatgcagggtcgggg-ttcgaaccccgaacaatccatttctccacaattaaattgtgtgag 8920  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || |||||||||||||||||||||    
T  8921 ctctagccattaggctacttgacaaaaa 8948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 11177 - 11062
Alignment:
Q  128 ctcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcatta 227  Q
    ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| || || || |||||    
T  11177 ctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccatta 11078  T
Q  228 ggctacttgacaaaaa 243  Q
    ||||||||||| ||||    
T  11077 ggctacttgaccaaaa 11062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 21505 - 21390
Alignment:
Q  128 ctcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaagttccagtcatta 227  Q
    ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| || || || |||||    
T  21505 ctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccatta 21406  T
Q  228 ggctacttgacaaaaa 243  Q
    ||||||||||| ||||    
T  21405 ggctacttgaccaaaa 21390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 17621 - 17748
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||  | | | |||||||||| |||| |||||||||||| | ||||| | ||| ||    
T  17621 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccggacactccacttctccacaattaaattgtgtgag 17720  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  17721 ctctagccactaggctacttgaccaaaa 17748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 10895 - 10768
Alignment:
Q  116 ccgtgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaaatatgtaag 215  Q
    ||||||| ||| ||||||||| | ||| |||||||| | ||||||||| | | | |||||||||| ||||  ||||||||||| | ||||| | ||| ||    
T  10895 ccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgag 10796  T
Q  216 ttccagtcattaggctacttgacaaaaa 243  Q
     || || || ||||||||||||| ||||    
T  10795 ctctagccactaggctacttgaccaaaa 10768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 24409 - 24471
Alignment:
Q  144 attgcataatttatgcagggtcagcgattcgaacccctgacattccacttctccatatttaaa 206  Q
    |||||||||||||||||||| | | | |||||||||| |||| ||||||||| || |||||||    
T  24409 attgcataatttatgcaggggccggggttcgaaccccggacactccacttcttcacatttaaa 24471  T

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Target: scaffold0519 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 3028 - 2951
Alignment:
Q  119 tgagtttaactcagttgggatggacattgcataatttatgcagggtcagcgattcgaacccctgacattccacttctc 196  Q
    |||| ||| ||||||||  | |||||||||||||||||||||||| | | | |||||||||| ||||  |||||||||    
T  3028 tgagcttagctcagttgaaagggacattgcataatttatgcaggggccggggttcgaaccccggacaccccacttctc 2951  T

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