View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11790_low_1 (Length: 689)

Name: NF11790_low_1
Description: NF11790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11790_low_1
NF11790_low_1
[»] chr8 (74 HSPs)
chr8 (19-335)||(4055449-4055767)
chr8 (512-685)||(4055098-4055271)
chr8 (379-459)||(4055324-4055405)
chr8 (107-199)||(14949875-14949967)
chr8 (107-194)||(25869240-25869327)
chr8 (105-247)||(12361199-12361343)
chr8 (107-197)||(9540967-9541057)
chr8 (105-198)||(6509273-6509366)
chr8 (105-198)||(33553247-33553340)
chr8 (105-206)||(39551171-39551272)
chr8 (108-172)||(11795102-11795166)
chr8 (105-201)||(11813072-11813168)
chr8 (105-201)||(42370328-42370424)
chr8 (125-216)||(8558687-8558778)
chr8 (105-199)||(7918415-7918509)
chr8 (105-163)||(8062336-8062394)
chr8 (125-199)||(44401588-44401661)
chr8 (125-190)||(11183572-11183637)
chr8 (105-178)||(30277235-30277308)
chr8 (135-192)||(37740403-37740459)
chr8 (128-181)||(43704363-43704416)
chr8 (139-199)||(7878496-7878555)
chr8 (112-199)||(9541134-9541219)
chr8 (135-199)||(30191110-30191174)
chr8 (125-207)||(34080225-34080304)
chr8 (112-171)||(2364490-2364549)
chr8 (105-172)||(2458562-2458629)
chr8 (126-197)||(6950350-6950421)
chr8 (105-172)||(20672757-20672824)
chr8 (105-172)||(37353245-37353312)
chr8 (30-179)||(7714176-7714323)
chr8 (125-214)||(21130641-21130728)
chr8 (137-178)||(3161613-3161654)
chr8 (105-190)||(11415161-11415246)
chr8 (128-189)||(13000403-13000464)
chr8 (105-170)||(28769337-28769402)
chr8 (105-174)||(31862500-31862569)
chr8 (124-247)||(9700027-9700150)
chr8 (105-197)||(40071756-40071848)
chr8 (135-194)||(926512-926571)
chr8 (105-184)||(4558805-4558884)
chr8 (105-172)||(6864456-6864522)
chr8 (107-178)||(6875257-6875328)
chr8 (64-158)||(7918783-7918875)
chr8 (106-197)||(10722632-10722723)
chr8 (33-174)||(29973018-29973158)
chr8 (140-199)||(32156973-32157032)
chr8 (105-152)||(41336661-41336708)
chr8 (107-166)||(42215084-42215143)
chr8 (125-195)||(7712021-7712091)
chr8 (107-189)||(11494319-11494401)
chr8 (105-199)||(11569426-11569520)
chr8 (149-207)||(14617766-14617824)
chr8 (108-174)||(21653091-21653157)
chr8 (105-159)||(27028838-27028892)
chr8 (105-199)||(30389106-30389200)
chr8 (113-198)||(30987961-30988047)
chr8 (105-179)||(31705092-31705166)
chr8 (105-158)||(4762516-4762569)
chr8 (105-150)||(8060676-8060721)
chr8 (105-174)||(14929133-14929201)
chr8 (126-199)||(31875564-31875637)
chr8 (107-168)||(33714236-33714297)
chr8 (137-198)||(41620261-41620322)
chr8 (107-172)||(42215302-42215367)
chr8 (105-158)||(43504758-43504811)
chr8 (136-172)||(3254263-3254299)
chr8 (105-165)||(5070970-5071030)
chr8 (105-201)||(8255399-8255495)
chr8 (107-171)||(28784793-28784856)
chr8 (107-199)||(30918122-30918213)
chr8 (140-176)||(38421306-38421342)
chr8 (124-172)||(41606899-41606947)
chr8 (145-197)||(43709309-43709361)
[»] chr4 (60 HSPs)
chr4 (105-199)||(11264308-11264402)
chr4 (112-195)||(21952962-21953045)
chr4 (125-199)||(6987710-6987784)
chr4 (105-160)||(11158365-11158420)
chr4 (105-199)||(2996580-2996674)
chr4 (105-247)||(14011241-14011383)
chr4 (137-202)||(6978928-6978993)
chr4 (126-190)||(22684499-22684563)
chr4 (127-199)||(25896809-25896885)
chr4 (112-179)||(32769621-32769688)
chr4 (105-188)||(53673638-53673721)
chr4 (105-199)||(23819096-23819190)
chr4 (145-199)||(27725261-27725315)
chr4 (105-170)||(30207569-30207634)
chr4 (108-184)||(2874608-2874684)
chr4 (124-172)||(29467620-29467668)
chr4 (107-195)||(46415765-46415853)
chr4 (105-168)||(4798566-4798629)
chr4 (128-174)||(3637377-3637423)
chr4 (105-207)||(21157775-21157877)
chr4 (125-199)||(27123321-27123395)
chr4 (136-201)||(4684072-4684137)
chr4 (124-185)||(24929519-24929580)
chr4 (105-190)||(27721724-27721809)
chr4 (105-166)||(55084483-55084544)
chr4 (108-172)||(1137722-1137786)
chr4 (139-199)||(41097225-41097285)
chr4 (105-201)||(52754607-52754702)
chr4 (106-173)||(825485-825552)
chr4 (137-196)||(1075491-1075550)
chr4 (105-152)||(18628559-18628606)
chr4 (124-199)||(19394732-19394807)
chr4 (145-184)||(28749891-28749930)
chr4 (137-172)||(30024745-30024780)
chr4 (126-185)||(43412389-43412448)
chr4 (125-184)||(45732700-45732759)
chr4 (135-174)||(50800024-50800063)
chr4 (108-174)||(488120-488186)
chr4 (125-199)||(1312868-1312942)
chr4 (105-199)||(21043204-21043298)
chr4 (167-205)||(37636149-37636187)
chr4 (125-207)||(47970323-47970405)
chr4 (40-161)||(49219083-49219202)
chr4 (137-170)||(10205908-10205941)
chr4 (112-189)||(28614787-28614864)
chr4 (105-174)||(28615530-28615599)
chr4 (105-174)||(42121495-42121563)
chr4 (128-197)||(43824313-43824382)
chr4 (128-197)||(45128281-45128350)
chr4 (108-145)||(46328437-46328474)
chr4 (135-207)||(3176065-3176137)
chr4 (105-169)||(7694009-7694073)
chr4 (135-195)||(10812545-10812605)
chr4 (155-199)||(19429481-19429525)
chr4 (112-160)||(19429723-19429771)
chr4 (105-153)||(31006025-31006073)
chr4 (107-147)||(36048542-36048582)
chr4 (35-75)||(44119253-44119293)
chr4 (138-178)||(51555880-51555920)
chr4 (137-197)||(53155299-53155359)
[»] chr2 (78 HSPs)
chr2 (105-199)||(32821816-32821910)
chr2 (107-184)||(34652020-34652097)
chr2 (104-199)||(17221509-17221604)
chr2 (105-176)||(36852479-36852550)
chr2 (105-247)||(15120190-15120332)
chr2 (135-247)||(43456628-43456740)
chr2 (114-172)||(5781685-5781743)
chr2 (105-199)||(14299600-14299694)
chr2 (105-174)||(1939326-1939395)
chr2 (58-174)||(33942112-33942226)
chr2 (105-174)||(43065444-43065513)
chr2 (126-207)||(43985237-43985318)
chr2 (106-178)||(10285868-10285940)
chr2 (105-172)||(5826224-5826291)
chr2 (105-184)||(43205316-43205395)
chr2 (104-170)||(750357-750423)
chr2 (105-199)||(5133779-5133873)
chr2 (105-199)||(35993349-35993443)
chr2 (130-207)||(18884899-18884976)
chr2 (126-199)||(25661135-25661208)
chr2 (128-245)||(39621981-39622098)
chr2 (139-199)||(5452367-5452427)
chr2 (99-171)||(10285356-10285428)
chr2 (61-199)||(16503317-16503454)
chr2 (125-201)||(27237860-27237936)
chr2 (135-203)||(37186281-37186349)
chr2 (107-179)||(42131626-42131698)
chr2 (105-197)||(1830048-1830144)
chr2 (125-207)||(24098129-24098209)
chr2 (137-184)||(30538157-30538204)
chr2 (107-201)||(30552610-30552705)
chr2 (137-199)||(1494415-1494477)
chr2 (105-179)||(7283003-7283077)
chr2 (105-174)||(9174822-9174892)
chr2 (135-237)||(9478336-9478438)
chr2 (105-170)||(10563556-10563621)
chr2 (145-207)||(11344731-11344793)
chr2 (155-201)||(39962266-39962312)
chr2 (107-172)||(787341-787406)
chr2 (114-179)||(41809234-41809299)
chr2 (142-207)||(44269010-44269075)
chr2 (124-172)||(1647262-1647310)
chr2 (105-189)||(9878661-9878745)
chr2 (137-237)||(9996777-9996877)
chr2 (105-169)||(35379015-35379079)
chr2 (107-199)||(41817177-41817269)
chr2 (125-184)||(12215834-12215893)
chr2 (135-174)||(14451044-14451083)
chr2 (105-172)||(29316771-29316838)
chr2 (130-196)||(38388718-38388785)
chr2 (128-195)||(43635074-43635141)
chr2 (105-195)||(1742005-1742095)
chr2 (107-189)||(9595267-9595349)
chr2 (124-178)||(25796190-25796244)
chr2 (107-177)||(29633082-29633152)
chr2 (137-195)||(33256779-33256837)
chr2 (160-198)||(39539711-39539749)
chr2 (105-163)||(40279414-40279472)
chr2 (107-172)||(680512-680577)
chr2 (135-172)||(6547939-6547976)
chr2 (105-194)||(9556246-9556335)
chr2 (136-209)||(14316104-14316177)
chr2 (33-121)||(17952748-17952834)
chr2 (105-166)||(22681187-22681248)
chr2 (105-198)||(28933831-28933923)
chr2 (117-206)||(32364693-32364782)
chr2 (136-169)||(37845364-37845397)
chr2 (107-172)||(42420006-42420071)
chr2 (135-172)||(44438835-44438872)
chr2 (105-204)||(3611233-3611333)
chr2 (112-168)||(3973549-3973605)
chr2 (155-199)||(4550804-4550848)
chr2 (105-169)||(10198479-10198543)
chr2 (105-197)||(12313144-12313236)
chr2 (135-199)||(27699498-27699562)
chr2 (105-149)||(32634342-32634386)
chr2 (105-197)||(36415645-36415736)
chr2 (107-171)||(44443330-44443394)
[»] chr3 (81 HSPs)
chr3 (105-199)||(37273141-37273235)
chr3 (108-199)||(11253511-11253602)
chr3 (105-197)||(31010409-31010501)
chr3 (125-197)||(43115083-43115155)
chr3 (105-207)||(36646343-36646445)
chr3 (107-189)||(43397836-43397918)
chr3 (105-207)||(24624217-24624319)
chr3 (105-199)||(41644414-41644508)
chr3 (105-199)||(52323863-52323959)
chr3 (107-179)||(53848052-53848124)
chr3 (105-168)||(22214659-22214722)
chr3 (136-198)||(14598523-14598585)
chr3 (125-199)||(20192575-20192649)
chr3 (125-199)||(21574517-21574591)
chr3 (105-170)||(20669179-20669244)
chr3 (105-198)||(31710857-31710950)
chr3 (105-198)||(31711112-31711205)
chr3 (105-174)||(48048976-48049045)
chr3 (126-195)||(49465909-49465978)
chr3 (105-165)||(237404-237464)
chr3 (60-179)||(2201092-2201209)
chr3 (104-172)||(30923894-30923962)
chr3 (107-171)||(44488892-44488956)
chr3 (112-172)||(50952347-50952407)
chr3 (112-195)||(2081056-2081139)
chr3 (147-190)||(22232882-22232925)
chr3 (107-170)||(34924536-34924599)
chr3 (105-172)||(39602206-39602273)
chr3 (105-160)||(43948662-43948717)
chr3 (105-199)||(8933794-8933888)
chr3 (41-174)||(10357378-10357509)
chr3 (105-171)||(24887281-24887346)
chr3 (105-171)||(38462288-38462354)
chr3 (105-191)||(41633367-41633453)
chr3 (109-170)||(6483812-6483873)
chr3 (125-174)||(13804804-13804853)
chr3 (105-170)||(23249565-23249630)
chr3 (105-170)||(33883748-33883813)
chr3 (105-174)||(48528563-48528632)
chr3 (107-184)||(52412888-52412965)
chr3 (110-166)||(21862177-21862233)
chr3 (104-172)||(24785211-24785279)
chr3 (107-159)||(25459642-25459693)
chr3 (126-174)||(36200124-36200172)
chr3 (105-169)||(40665436-40665500)
chr3 (105-184)||(41724218-41724298)
chr3 (105-198)||(42817192-42817287)
chr3 (105-153)||(44295536-44295584)
chr3 (107-178)||(16790369-16790439)
chr3 (105-199)||(21367674-21367769)
chr3 (105-172)||(31403154-31403221)
chr3 (107-154)||(37138299-37138346)
chr3 (125-172)||(37825149-37825196)
chr3 (105-184)||(41452530-41452609)
chr3 (137-236)||(53762326-53762425)
chr3 (125-179)||(3044248-3044302)
chr3 (128-190)||(29771868-29771930)
chr3 (105-171)||(30573911-30573977)
chr3 (135-189)||(37155038-37155092)
chr3 (135-189)||(37200393-37200447)
chr3 (105-199)||(50600147-50600241)
chr3 (105-178)||(1816590-1816663)
chr3 (105-186)||(9279308-9279389)
chr3 (125-174)||(25925769-25925818)
chr3 (135-172)||(27290897-27290934)
chr3 (125-194)||(28801292-28801361)
chr3 (139-172)||(31615548-31615581)
chr3 (126-191)||(39971325-39971390)
chr3 (126-171)||(45432936-45432981)
chr3 (137-174)||(47132033-47132070)
chr3 (137-190)||(54775166-54775219)
chr3 (105-201)||(1217767-1217863)
chr3 (135-171)||(1360523-1360559)
chr3 (112-164)||(33880560-33880612)
chr3 (105-161)||(44284087-44284143)
chr3 (135-171)||(46434615-46434651)
chr3 (105-161)||(49174151-49174207)
chr3 (136-184)||(50004690-50004738)
chr3 (105-181)||(54180767-54180843)
chr3 (107-199)||(54837003-54837095)
chr3 (165-201)||(54965549-54965585)
[»] chr7 (61 HSPs)
chr7 (125-199)||(48157089-48157163)
chr7 (107-184)||(45078287-45078364)
chr7 (124-184)||(12234873-12234933)
chr7 (105-196)||(42281486-42281577)
chr7 (35-197)||(27481265-27481425)
chr7 (105-199)||(21453301-21453395)
chr7 (105-199)||(39334200-39334294)
chr7 (58-171)||(44151477-44151588)
chr7 (138-199)||(12834931-12834992)
chr7 (105-190)||(33645939-33646023)
chr7 (137-178)||(44808197-44808238)
chr7 (135-195)||(3500940-3501000)
chr7 (125-197)||(27121565-27121636)
chr7 (137-189)||(39539760-39539812)
chr7 (105-184)||(18749801-18749880)
chr7 (105-168)||(24363601-24363664)
chr7 (126-197)||(27626094-27626165)
chr7 (136-187)||(39568305-39568356)
chr7 (114-184)||(941556-941626)
chr7 (135-185)||(2767161-2767211)
chr7 (105-171)||(5628564-5628629)
chr7 (125-199)||(22387865-22387939)
chr7 (128-178)||(29287257-29287307)
chr7 (105-199)||(39360030-39360124)
chr7 (111-173)||(40428568-40428630)
chr7 (105-174)||(529382-529451)
chr7 (136-197)||(36598327-36598388)
chr7 (128-189)||(39551527-39551588)
chr7 (137-189)||(21247965-21248017)
chr7 (126-174)||(27517850-27517898)
chr7 (124-184)||(29290359-29290419)
chr7 (105-169)||(46056009-46056073)
chr7 (110-197)||(10079310-10079396)
chr7 (139-174)||(19719047-19719082)
chr7 (107-174)||(23434153-23434219)
chr7 (126-169)||(27496406-27496449)
chr7 (126-169)||(27503064-27503107)
chr7 (130-233)||(39345503-39345606)
chr7 (125-248)||(44615024-44615147)
chr7 (124-166)||(1710756-1710798)
chr7 (107-237)||(3468623-3468753)
chr7 (105-171)||(7244687-7244753)
chr7 (126-164)||(12792697-12792735)
chr7 (107-165)||(15075088-15075146)
chr7 (145-199)||(30751566-30751620)
chr7 (105-178)||(34035924-34035998)
chr7 (108-149)||(2012634-2012675)
chr7 (124-197)||(4001613-4001686)
chr7 (105-186)||(9423576-9423657)
chr7 (105-174)||(12110367-12110436)
chr7 (105-158)||(22283754-22283807)
chr7 (127-184)||(28520996-28521053)
chr7 (105-166)||(38010721-38010782)
chr7 (125-174)||(46082063-46082112)
chr7 (105-169)||(3610739-3610803)
chr7 (138-174)||(11048067-11048103)
chr7 (136-184)||(11721223-11721271)
chr7 (107-159)||(12792507-12792559)
chr7 (107-155)||(12792576-12792624)
chr7 (139-247)||(23214896-23215004)
chr7 (137-189)||(46281119-46281171)
[»] chr5 (54 HSPs)
chr5 (115-206)||(28586728-28586819)
chr5 (105-197)||(37611186-37611278)
chr5 (105-197)||(37787916-37788008)
chr5 (105-197)||(41052875-41052967)
chr5 (58-168)||(42181092-42181200)
chr5 (155-237)||(38047810-38047892)
chr5 (105-187)||(40205055-40205137)
chr5 (105-199)||(40534206-40534300)
chr5 (105-196)||(32172660-32172751)
chr5 (105-195)||(10272404-10272494)
chr5 (137-191)||(11700355-11700409)
chr5 (105-195)||(12242683-12242773)
chr5 (105-174)||(17368683-17368752)
chr5 (105-202)||(18704003-18704099)
chr5 (126-199)||(31208500-31208573)
chr5 (105-170)||(36638754-36638819)
chr5 (108-152)||(38104873-38104917)
chr5 (105-207)||(16380532-16380634)
chr5 (109-199)||(4619718-4619808)
chr5 (125-171)||(19138714-19138760)
chr5 (105-199)||(35095755-35095849)
chr5 (128-198)||(35963271-35963341)
chr5 (105-174)||(4855705-4855774)
chr5 (105-178)||(17258873-17258946)
chr5 (135-191)||(985650-985706)
chr5 (105-201)||(41957418-41957514)
chr5 (127-193)||(11667168-11667235)
chr5 (125-172)||(14331394-14331441)
chr5 (128-167)||(15074750-15074789)
chr5 (105-172)||(18543193-18543259)
chr5 (105-172)||(21768193-21768260)
chr5 (111-190)||(36542260-36542339)
chr5 (130-197)||(38728434-38728501)
chr5 (105-159)||(4014433-4014487)
chr5 (125-191)||(6109510-6109576)
chr5 (145-247)||(8820807-8820909)
chr5 (33-79)||(9202835-9202881)
chr5 (105-199)||(11457106-11457199)
chr5 (126-172)||(12521556-12521602)
chr5 (137-199)||(13264074-13264136)
chr5 (125-199)||(37526168-37526242)
chr5 (125-199)||(37690605-37690679)
chr5 (105-166)||(8651355-8651415)
chr5 (107-156)||(8985670-8985719)
chr5 (105-197)||(10391348-10391441)
chr5 (113-174)||(32194073-32194134)
chr5 (105-170)||(34975371-34975436)
chr5 (59-195)||(35960377-35960510)
chr5 (105-198)||(36774677-36774770)
chr5 (30-79)||(37112345-37112394)
chr5 (108-153)||(7550521-7550568)
chr5 (155-207)||(16944936-16944988)
chr5 (105-165)||(31723812-31723872)
chr5 (105-197)||(34690880-34690972)
[»] chr6 (64 HSPs)
chr6 (107-189)||(2455819-2455901)
chr6 (107-189)||(4420652-4420734)
chr6 (130-199)||(2027767-2027836)
chr6 (109-206)||(34939755-34939852)
chr6 (109-199)||(281817-281907)
chr6 (58-199)||(1402958-1403097)
chr6 (105-179)||(6647394-6647468)
chr6 (105-179)||(9667974-9668048)
chr6 (126-190)||(2034424-2034488)
chr6 (126-198)||(9027606-9027678)
chr6 (58-184)||(2117365-2117489)
chr6 (105-172)||(3168257-3168324)
chr6 (125-199)||(8420166-8420240)
chr6 (58-174)||(3155138-3155251)
chr6 (135-248)||(24973947-24974060)
chr6 (126-207)||(34939541-34939622)
chr6 (59-182)||(2112164-2112284)
chr6 (104-172)||(27894052-27894120)
chr6 (125-188)||(7785724-7785787)
chr6 (105-195)||(9093528-9093619)
chr6 (105-184)||(19275620-19275699)
chr6 (129-172)||(30004921-30004964)
chr6 (105-167)||(2205591-2205653)
chr6 (125-199)||(2460120-2460194)
chr6 (139-189)||(3775107-3775157)
chr6 (106-200)||(10616509-10616603)
chr6 (125-199)||(32171494-32171568)
chr6 (135-234)||(33385564-33385665)
chr6 (136-189)||(738659-738712)
chr6 (105-206)||(4324416-4324516)
chr6 (105-174)||(7931720-7931789)
chr6 (105-174)||(10031739-10031808)
chr6 (125-170)||(27909636-27909681)
chr6 (105-174)||(31686357-31686426)
chr6 (136-172)||(283133-283169)
chr6 (126-174)||(725649-725697)
chr6 (106-174)||(3528811-3528879)
chr6 (126-174)||(6536975-6537023)
chr6 (124-184)||(24670446-24670506)
chr6 (105-169)||(31583686-31583750)
chr6 (155-199)||(32917254-32917298)
chr6 (143-199)||(32976023-32976079)
chr6 (136-207)||(1669759-1669830)
chr6 (135-207)||(24631873-24631947)
chr6 (124-199)||(27595536-27595611)
chr6 (126-197)||(32577957-32578028)
chr6 (137-195)||(821838-821896)
chr6 (136-178)||(28467861-28467903)
chr6 (105-207)||(33067165-33067267)
chr6 (136-178)||(34735830-34735872)
chr6 (137-190)||(2027384-2027437)
chr6 (105-174)||(4006721-4006790)
chr6 (137-190)||(5329012-5329065)
chr6 (30-79)||(9559628-9559677)
chr6 (140-173)||(9732518-9732551)
chr6 (105-206)||(20368142-20368243)
chr6 (105-174)||(25100050-25100119)
chr6 (105-174)||(34403862-34403931)
chr6 (140-184)||(3774989-3775033)
chr6 (105-201)||(20377887-20377983)
chr6 (124-172)||(24329947-24329995)
chr6 (155-207)||(27857415-27857467)
chr6 (105-173)||(31807841-31807909)
chr6 (125-189)||(32386542-32386606)
[»] chr1 (90 HSPs)
chr1 (105-197)||(23373284-23373375)
chr1 (106-170)||(47020515-47020579)
chr1 (107-201)||(52190138-52190232)
chr1 (135-199)||(3597250-3597314)
chr1 (107-178)||(10199398-10199469)
chr1 (107-190)||(33722379-33722462)
chr1 (99-179)||(35350637-35350721)
chr1 (105-199)||(12564468-12564562)
chr1 (105-199)||(17420210-17420304)
chr1 (105-195)||(27140485-27140575)
chr1 (105-190)||(19412575-19412660)
chr1 (105-165)||(12564877-12564937)
chr1 (135-199)||(15579519-15579583)
chr1 (127-207)||(37941946-37942026)
chr1 (59-198)||(45205031-45205168)
chr1 (105-172)||(4202147-4202214)
chr1 (105-199)||(4549510-4549605)
chr1 (107-174)||(4699609-4699676)
chr1 (136-179)||(6231805-6231848)
chr1 (107-166)||(6279408-6279467)
chr1 (125-172)||(26184775-26184822)
chr1 (105-172)||(37811859-37811926)
chr1 (135-201)||(3063037-3063102)
chr1 (166-248)||(5157140-5157222)
chr1 (105-170)||(7472318-7472384)
chr1 (105-171)||(25479588-25479654)
chr1 (125-199)||(31517709-31517783)
chr1 (108-174)||(37593678-37593744)
chr1 (105-199)||(38867800-38867894)
chr1 (123-172)||(15687082-15687131)
chr1 (105-206)||(16322856-16322957)
chr1 (135-184)||(17628636-17628685)
chr1 (105-178)||(24460397-24460470)
chr1 (130-195)||(24502801-24502866)
chr1 (105-174)||(28262613-28262682)
chr1 (59-171)||(30257646-30257756)
chr1 (137-202)||(33185924-33185989)
chr1 (105-206)||(34290243-34290344)
chr1 (141-194)||(45327623-45327676)
chr1 (125-197)||(6292520-6292591)
chr1 (124-172)||(11639412-11639460)
chr1 (105-165)||(23902070-23902130)
chr1 (112-172)||(28689448-28689508)
chr1 (107-179)||(30014067-30014139)
chr1 (124-172)||(33975596-33975644)
chr1 (91-172)||(35925681-35925764)
chr1 (107-199)||(44422708-44422800)
chr1 (104-195)||(3224429-3224520)
chr1 (105-172)||(4622100-4622167)
chr1 (128-199)||(4868430-4868500)
chr1 (136-195)||(6262776-6262835)
chr1 (105-164)||(6659521-6659580)
chr1 (105-152)||(28077085-28077132)
chr1 (137-172)||(29723528-29723563)
chr1 (105-184)||(29834889-29834968)
chr1 (125-192)||(32859922-32859989)
chr1 (128-247)||(33723303-33723422)
chr1 (111-174)||(46252676-46252739)
chr1 (105-179)||(4548728-4548802)
chr1 (105-159)||(6102161-6102215)
chr1 (125-195)||(10439713-10439783)
chr1 (41-79)||(13809943-13809981)
chr1 (105-247)||(17269257-17269399)
chr1 (106-184)||(17778965-17779043)
chr1 (137-191)||(30815630-30815684)
chr1 (109-199)||(32515410-32515500)
chr1 (105-171)||(35017583-35017649)
chr1 (105-199)||(35058401-35058495)
chr1 (105-199)||(41195162-41195256)
chr1 (126-172)||(45999284-45999330)
chr1 (105-166)||(49125853-49125912)
chr1 (108-197)||(4033988-4034075)
chr1 (125-174)||(8016284-8016333)
chr1 (135-172)||(12477283-12477320)
chr1 (105-190)||(15437970-15438055)
chr1 (136-197)||(15581292-15581353)
chr1 (126-199)||(28935845-28935918)
chr1 (126-171)||(39777691-39777736)
chr1 (140-207)||(8780385-8780453)
chr1 (137-193)||(9602636-9602691)
chr1 (128-172)||(10854763-10854807)
chr1 (105-181)||(16981923-16981999)
chr1 (136-184)||(24968400-24968448)
chr1 (136-184)||(25432249-25432297)
chr1 (112-191)||(26185524-26185604)
chr1 (136-180)||(30371186-30371230)
chr1 (108-152)||(35590908-35590952)
chr1 (127-171)||(36151502-36151546)
chr1 (105-165)||(39270428-39270488)
chr1 (125-189)||(46499853-46499917)
[»] scaffold0024 (1 HSPs)
scaffold0024 (33-199)||(27513-27677)
[»] scaffold0159 (1 HSPs)
scaffold0159 (114-172)||(27017-27075)
[»] scaffold0020 (1 HSPs)
scaffold0020 (105-247)||(159894-160036)
[»] scaffold0003 (1 HSPs)
scaffold0003 (105-172)||(306333-306400)
[»] scaffold0147 (1 HSPs)
scaffold0147 (114-184)||(12688-12758)
[»] scaffold0153 (2 HSPs)
scaffold0153 (108-185)||(6477-6554)
scaffold0153 (108-185)||(13497-13574)
[»] scaffold0012 (1 HSPs)
scaffold0012 (155-198)||(38649-38692)


Alignment Details
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 19 - 335
Target Start/End: Complemental strand, 4055767 - 4055449
Alignment:
Q  19 cttacagtatcagcgcttatatataagttacttctttagcaaaagataaaacaaagttaaacgttttccatgt--aaactacaagttgtgttttcataag 116  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  4055767 cttacagtatcagcgcttatatgtaagttacttctttagcaaaagataaaacaaagttaaacgttttccatgtgtaaactacaagttgtgttttcataag 4055668  T
Q  117 ctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4055667 ctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataa 4055568  T
Q  217 tagcagataagttcaaataagaaaatccaaattccaaagagccttaaagtgtgaaattcattctaaactcaaccttcaacttcaacttttcaatgagtaa 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4055567 tagcagataagttcaaataagaaaatccaaattccaaagagccttaaagtgtgaaattcattctaaactcaaccttcaacttcaacttttcaatgagtaa 4055468  T
Q  317 catcatcaaccaatcacta 335  Q
    |||||||||||||||||||    
T  4055467 catcatcaaccaatcacta 4055449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 512 - 685
Target Start/End: Complemental strand, 4055271 - 4055098
Alignment:
Q  512 tcaactcctctacttataaagtaaccattcaacctcaacgttgatgggtctaacccaaaagctatagctatggaaccaagatcaannnnnnnatcatcac 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||    
T  4055271 tcaactcctctacttataaagtaaccattcaacctcaacgttgatgggtctaacccaaaagctatagctatggaaccaagatcaattttttcatcatcac 4055172  T
Q  612 aagtaacaagttcaacactttttgactttgagagtgaagggcataacagtaatatctttgtttctctgcttctc 685  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  4055171 aagtaacaagttcaacactttttgactttgagagtgaagggcataacagtgatatctttgtttctctgtttctc 4055098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 379 - 459
Target Start/End: Complemental strand, 4055405 - 4055324
Alignment:
Q  379 cttgacaaaca-tacccttgttaacatctttgccagtaacaacaatagcatcatggttacttttcccagtagacaaacctct 459  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4055405 cttgacaaacaatacccttgttaacatctttgccagtaacaacaatagcatcatggttacttttcccagtagacaaacctct 4055324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 14949875 - 14949967
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||  | |||| |||  |||||||||||||||||| ||||||||||||||||||||||||  |||| |||||| |||||||    
T  14949875 ttttcataagctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataagttattttcataagctctcctaaacagt 14949967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 107 - 194
Target Start/End: Complemental strand, 25869327 - 25869240
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaa 194  Q
    |||||||| ||||||   ||||| ||| ||||||||||||||||||  ||||||||||||||||||||||||| ||| ||||||||||    
T  25869327 ttttcataggctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcataagttatttccatagactctcccaa 25869240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 105 - 247
Target Start/End: Original strand, 12361199 - 12361343
Alignment:
Q  105 tgttttcataagctatctcag-agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctata--aactctcccaaacagttt 201  Q
    |||||||||||| ||| |||| |||||| | ||||||||| ||||||||| |||||||||||||||||| ||||||||||  | ||||| |||| ||| |    
T  12361199 tgttttcataagttat-tcaggagagctaatggaaataagttgaaaacagcttatggacatgtcataagctatttctataagatctctctcaaagagtct 12361297  T
Q  202 tacaagcatttataatagcagataagttcaaataagaaaatccaaa 247  Q
     ||||| | |||||  || |||||||||||||||||  ||||||||    
T  12361298 aacaagtacttatatcagtagataagttcaaataagtcaatccaaa 12361343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 9541057 - 9540967
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||||||||||||  |||||||||  | |||||||||||| |||  |||||||||||||||||| | |||| |||| ||||||||||||    
T  9541057 ttttcataagctatcctagagagcttttgaaaataagctgaacacaaattatggacatgtcataagatgtttccataagctctcccaaaca 9540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 6509366 - 6509273
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    |||||||||||||||||   |||||||||  |||||||| |||||| ||||||| | ||||||||||| | ||||||||| ||||| |||||||    
T  6509366 tgttttcataagctatcctggagagcttattgaaataaggtgaaaatagtttataggcatgtcataagctgtttctataagctctctcaaacag 6509273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 33553247 - 33553340
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    ||||||||||||||||||   |||||||| ||||||||||||  ||||| ||| ||||||||||||||||  ||| |||| |||| ||||||||    
T  33553247 tgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttgcttcaataagctcttccaaacag 33553340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 39551272 - 39551171
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    |||||||||||||| ||   |||||||||   ||||||| | ||||||| || ||||||||||||||||| |||| ||||| ||||||||||||||| ||    
T  39551272 tgttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccataaattctcccaaacagtttcac 39551173  T
Q  205 aa 206  Q
    ||    
T  39551172 aa 39551171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 11795102 - 11795166
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||||||    ||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  11795102 tttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcataag 11795166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 11813168 - 11813072
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    ||||||||||||||||||   ||||||||  ||||||||||||||||||  |||||| ||||||||| || |||| ||||  ||||||| |||||||    
T  11813168 tgttttcataagctatcttcaagagcttacagaaataagctgaaaacagcctatggatatgtcataaattgtttccataagttctcccatacagttt 11813072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 42370424 - 42370328
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    |||| ||||||||||||    |||| ||| |||||||||||||||||||||| | ||||||||||| | |||||  ||||||| |||||||||||||    
T  42370424 tgttctcataagctatcatgaagagtttatggaaataagctgaaaacagtttgtagacatgtcatacgctattttcataaactttcccaaacagttt 42370328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 8558687 - 8558778
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataa 216  Q
    ||||||||| | |||||| ||||||| |||| |||||||||||| ||||| |||| |||| |||||||||||||  | ||||| ||||||||    
T  8558687 gagagcttatgaaaataatctgaaaatagttgatggacatgtcacaagttgtttccataagctctcccaaacagcctcacaagtatttataa 8558778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 7918509 - 7918415
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||| ||||||||||  |||||||||  |||||||| || |||||| ||||| ||||||| |||||| |||  |||| ||||||||||||||    
T  7918509 tgttttcgtaagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgttttcataagctctcccaaacagt 7918415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 8062336 - 8062394
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggaca 163  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||||||  |||||||||    
T  8062336 tgttttcataagctatcttagagagattatggaaataagctgaaaacatcttatggaca 8062394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 44401588 - 44401661
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||| |||| |||||||||||||||||| | |||| ||||||| |||||| |||||||||||| |||||||||||    
T  44401588 gagaacttatggaaataagctgaaaacaatgtatgaacatgtc-taagttgtttctataaactatcccaaacagt 44401661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 11183572 - 11183637
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    ||||||||| ||||||||||||||||||| |||| ||||| ||||||||| ||| ||||| |||||    
T  11183572 gagagcttatggaaataagctgaaaacagcttatagacatatcataagttgtttttataagctctc 11183637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 30277308 - 30277235
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    |||||||||||||||||  |||||| ||| ||||||||||||||||||  |||||| |||||| |||| |||||    
T  30277308 tgttttcataagctatcctagagagtttatggaaataagctgaaaacaacttatggccatgtcctaagctattt 30277235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 37740459 - 37740403
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctccc 192  Q
    |||||||||||||||| |||| |||||||||||||||||| |||| ||||||||||||    
T  37740459 ggaaataagctgaaaatagtt-atggacatgtcataagttgtttccataaactctccc 37740403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 43704416 - 43704363
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttcta 181  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  43704416 agcttatggaaataagcttaaaacagtttatgaacatgtcataagttgtttcta 43704363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 7878555 - 7878496
Alignment:
Q  139 ataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||||||| ||||||||||||| |  |||||||| ||||||||||||||    
T  7878555 ataagctgaaaacagtttatagacatgtcataagct-gttctataagctctcccaaacagt 7878496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 9541219 - 9541134
Alignment:
Q  112 ataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||| |||||||||  || ||||||| |||||||| ||||||  |||||||||| | |||  |||||||||||||||||||    
T  9541219 ataagctatcttagagagcttttggtaataagccgaaaacagattatgg--atgtcataagatgttttcataaactctcccaaacagt 9541134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 30191174 - 30191110
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||||||||  || || |||||||||||||| |||| |||| ||||||||||||||    
T  30191174 ggaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaacagt 30191110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 207
Target Start/End: Complemental strand, 34080304 - 34080225
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    ||||||||| |||||||||||||||||   |||||||||||||||||   ||||||  |||| |||||||||||| |||||||    
T  34080304 gagagcttatggaaataagctgaaaac---ttatggacatgtcataaacgatttcttcaaaccctcccaaacagtcttacaag 34080225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 2364549 - 2364490
Alignment:
Q  112 ataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    ||||||||||| |||||||||   |||| |||||||||||| ||||||||||||||||||    
T  2364549 ataagctatcttagagagcttgtcgaaaaaagctgaaaacactttatggacatgtcataa 2364490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 2458629 - 2458562
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||| |||||||||||  |||||||||| |||||||| |||||||||| ||||| ||||| ||||||    
T  2458629 tgtttacataagctatcctagagagcttatggaaataaactgaaaacagcttatgaacatgccataag 2458562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 6950350 - 6950421
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||||| ||||||||||||||||||  |||| ||||||||||| ||| |||  |||| ||||||||||||    
T  6950350 agagcttatggaaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaaca 6950421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 20672757 - 20672824
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||| ||||||||||   ||||||||| | ||||||||||||||||| ||||| ||||||||||||    
T  20672757 tgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 20672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 37353312 - 37353245
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||| ||||||||||  ||||||||| | |||||| |||||||||||||||| | ||||||||||    
T  37353312 tgttttcttaagctatctttgagagcttatgaaaataatctgaaaacagtttatgaatatgtcataag 37353245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 179
Target Start/End: Original strand, 7714176 - 7714323
Alignment:
Q  30 agcgcttatatataagttacttctttagcaaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagag 129  Q
    ||||||||| |||||||||| ||| || |||||||||||| |||| | | |  ||| ||| | ||||| ||||  ||||||||| ||||||||  |||||    
T  7714176 agcgcttatgtataagttacatctataacaaaagataaaataaaggtgagctgttttcatatcaactataagt--tgttttcatgagctatcttggagag 7714273  T
Q  130 cttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    || | | ||||||| ||||||||| | || ||||| ||||||||| ||||    
T  7714274 ctcatgaaaataagttgaaaacagctcatcgacatttcataagttgtttc 7714323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 214
Target Start/End: Original strand, 21130641 - 21130728
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttat 214  Q
    ||||||||| ||||||||||| |||||||   |||||||||||| ||| |||||| |||| ||||| |||||||| | ||||| ||||||    
T  21130641 gagagcttatggaaataagctcaaaacagc--atggacatgtcaaaagctatttccataagctctctcaaacagtctcacaagtatttat 21130728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 3161654 - 3161613
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  3161654 aaataagctgaaaacattttatgaacatgtcataagttattt 3161613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 11415161 - 11415246
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    |||||||||||||||||  |||||| ||  | ||||||||||| || || |||||||||||| ||||| | |||| ||||||||||    
T  11415161 tgttttcataagctatcctagagagtttgtgaaaataagctgagaatagcttatggacatgttataagctgtttccataaactctc 11415246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 13000464 - 13000403
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    |||||| ||||||||||||||||||  || ||||||||||||||||| || | |||||||||    
T  13000464 agcttatggaaataagctgaaaacaacttgtggacatgtcataagttgttaccataaactct 13000403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 28769402 - 28769337
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    |||||||||||||||| |  ||||| ||| ||||||||||||||||||  |||||||||| |||||    
T  28769402 tgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacatatcata 28769337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 31862500 - 31862569
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||||||| ||||  |||||||||| | ||||||||||||||||| ||||| | | ||||||||||    
T  31862500 tgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatgcataggtcataagtt 31862569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 9700027 - 9700150
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt-atttctataaactctcccaaacagttttacaagcatttataatagcag 222  Q
    |||||||||| | ||||||| ||||||||| ||||||||||||||||| || ||||| | || ||||| |||| ||| | |||||  |||||  ||| ||    
T  9700027 agagagcttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttc-acaagctctctcaaatagtctcacaagtgtttatgctagtag 9700125  T
Q  223 ataagttcaaataagaaaatccaaa 247  Q
    ||||| |||||||||  ||||||||    
T  9700126 ataagctcaaataagttaatccaaa 9700150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 40071756 - 40071848
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||||| ||||||||  ||| |||||| | |||| || ||||| | | ||||| |||||||||||||| |||| |||| ||||||||||||    
T  40071756 tgttttcagaagctatcctagaaagcttatgaaaattagttgaaagctgattatgaacatgtcataagttgtttccataagctctcccaaaca 40071848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 926512 - 926571
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaa 194  Q
    ||||||||||||||||| | ||||| |||||||||||||| |||  ||||| ||||||||    
T  926512 ggaaataagctgaaaacggcttatgaacatgtcataagttgttttgataaattctcccaa 926571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 4558805 - 4558884
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||| |||||||||||  |||||||||| |||||||| || ||||||  |||| ||||  |||||||||||||| ||||    
T  4558805 tgtttccataagctatcctagagagcttatggaaataaactaaaaacaacttatagacacatcataagttatttccataa 4558884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 6864522 - 6864456
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||||||||| |  |||||||| |||||||||||||||||  |||||||| |||| ||||||    
T  6864522 tgttttcataagctattttggagagcttgaggaaataagctgaaaa-ggtttatgggcatgccataag 6864456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 6875328 - 6875257
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    |||||||| |||||||  ||||||||||||||||||| |||||| | ||||||| |||| ||| || |||||    
T  6875328 ttttcatatgctatcttggagagcttaaggaaataagttgaaaaaaatttatgggcatgccattagctattt 6875257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 7918875 - 7918783
Alignment:
Q  64 ataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttat 158  Q
    |||||| |||||||||  |||| | ||||| ||| |||||||  |||||||||||||||   |||||||  ||||||||||||||||||| ||||    
T  7918875 ataaaataaagttaaatttttttcttgtaagctataagttgt--tttcataagctatcttgtagagcttgtggaaataagctgaaaacagattat 7918783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 10722632 - 10722723
Alignment:
Q  106 gttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    ||||||||||||| |   |||||||| | ||||||||||| ||||||   |||||| |||||||||| | |||| ||||| |||||||||||    
T  10722632 gttttcataagctgttctagagagctgatggaaataagctaaaaacaacctatggagatgtcataagctgtttccataaattctcccaaaca 10722723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 174
Target Start/End: Original strand, 29973018 - 29973158
Alignment:
Q  33 gcttatatataagttacttctttagcaaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagctt 132  Q
    ||||||||||||| || ||||||| || ||| ||||| ||||| ||||  ||| ||  ||| ||| |||||||  ||||||||||||||   ||||| ||    
T  29973018 gcttatatataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttgt--tttcataagctatccttgagagttt 29973115  T
Q  133 aaggaaataagctgaaaa-cagtttatggacatgtcataagtt 174  Q
    | |||||||| ||||||| ||| || |||||||||| ||||||    
T  29973116 atggaaataaactgaaaaccagcttttggacatgtcgtaagtt 29973158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 32157032 - 32156973
Alignment:
Q  140 taagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||| || || |||||| |||||||||||| |||||| ||| ||||||||    
T  32157032 taagctgaaaacagcttgtgaacatgtaataagttatttccataaaccctctcaaacagt 32156973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 41336708 - 41336661
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaaca 152  Q
    ||||||||||||||||||  ||||||||  ||||||||||||||||||    
T  41336708 tgttttcataagctatctaggagagcttgcggaaataagctgaaaaca 41336661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 42215143 - 42215084
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgt 166  Q
    ||||||||||||||||  ||||||||| | ||||||||||||||||  ||||| ||||||    
T  42215143 ttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacatgt 42215084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 195
Target Start/End: Complemental strand, 7712091 - 7712021
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    |||||| || ||||||||| ||||||||| | ||||||||||||  || | ||||||||| ||||||||||    
T  7712091 gagagcatatggaaataaggtgaaaacagctaatggacatgtcacgagctttttctataagctctcccaaa 7712021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 11494319 - 11494401
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    ||||||||||||||| |||| |||||| ||| |||| || ||||||||||||  || | | ||||||| |||| |||||||||    
T  11494319 ttttcataagctatcccagaaagcttatggacataatctaaaaacagtttatacacgtattataagttgtttccataaactct 11494401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 11569520 - 11569426
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||||   ||||| ||  | ||||||||||||||||  ||||| |||||||||||| | |||| |||| |||||  |||||||    
T  11569520 tgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagt 11569426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 14617824 - 14617766
Alignment:
Q  149 aacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    ||||||||||| |||||||||||| |||||  ||||||||| | ||||| |||||||||    
T  14617824 aacagtttatgtacatgtcataagctattttgataaactctactaaacaattttacaag 14617766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 21653091 - 21653157
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||| ||||||||  ||||||||| | |||||||||||||| || ||||| || |||||||||||    
T  21653091 tttcattagctatcttggagagcttatgaaaataagctgaaaatagcttatgaacgtgtcataagtt 21653157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 27028838 - 27028892
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatg 159  Q
    ||||||||||||||||||  ||||||||| | |||||||||||||| || |||||    
T  27028838 tgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatg 27028892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 30389106 - 30389200
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||| ||  ||||| |||| | ||||||||||||||||  ||||| ||||||||| || |||||  |||  ||||| ||||||||    
T  30389106 tgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacatgtcattagctattttcatatgctctctcaaacagt 30389200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 30988047 - 30987961
Alignment:
Q  113 taagctatctcagagagcttaaggaaataagctgaaaac-agtttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    ||||||||||  ||| ||||| |||| ||| |||||||  || |||||||||||||||||||| |||| |||| ||||| |||||||    
T  30988047 taagctatctttgagggcttatggaactaaactgaaaaatagcttatggacatgtcataagttgtttccataagctctctcaaacag 30987961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 31705092 - 31705166
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    |||||||||||||| ||   ||||| ||| ||||||||||||||||||| ||||| |||| || |||| ||||||    
T  31705092 tgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttatgcacatctcttaagctatttc 31705166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 4762516 - 4762569
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttat 158  Q
    ||||||||||||||||||   |||||||| | |||||||||||||||| |||||    
T  4762516 tgttttcataagctatcttgaagagcttatgtaaataagctgaaaacaatttat 4762569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 8060676 - 8060721
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaa 150  Q
    ||||||||||||| |||  |||||||||| ||||||||||||||||    
T  8060676 tgttttcataagcaatcctagagagcttatggaaataagctgaaaa 8060721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 14929201 - 14929133
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||||||||||| |   |||||||  |||||||||||||||||||||| |  ||||||||||||||    
T  14929201 tgttttcataagctatgttgcagagcttttggaaataagctgaaaacagttt-tacacatgtcataagtt 14929133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 31875637 - 31875564
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||| | ||||||| ||||||  | |||||||||||||||||||| |||| |||| || || ||||||||    
T  31875637 agagcttatgaaaataagttgaaaatggcttatggacatgtcataagttgtttccataagctttctcaaacagt 31875564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 33714297 - 33714236
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtca 168  Q
    ||||||||||||||||  |||||||||   ||||||||||||||||| ||||| ||| ||||    
T  33714297 ttttcataagctatctgggagagcttataaaaataagctgaaaacagcttatgaacaagtca 33714236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 41620322 - 41620261
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    |||||||| |||||||  ||||||||||||||||| || |||| ||||||| |||| |||||    
T  41620322 aaataagcggaaaacaacttatggacatgtcataatttgtttccataaactttccctaacag 41620261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 42215367 - 42215302
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||| ||||||   ||||||||| | ||||||||||||||||| ||||| ||| ||||||||    
T  42215367 ttttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaagtcataag 42215302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 43504758 - 43504811
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttat 158  Q
    |||||| |||||||||||  |||| |||| ||||||||||||||||||| ||||    
T  43504758 tgtttttataagctatcttggagaacttatggaaataagctgaaaacagcttat 43504811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 3254263 - 3254299
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  3254263 gaaataagctgaaaacagcttatgaacatgtcataag 3254299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 5071030 - 5070970
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatg 165  Q
    |||||||||||| | |||| ||||||||  ||||||||||||||||||  ||||| |||||    
T  5071030 tgttttcataaggtctctcggagagctttcggaaataagctgaaaacatcttatgtacatg 5070970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 8255399 - 8255495
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    |||||||||||| ||||  ||  || ||||||||||||| ||||||||  ||||| ||||||||| |||| |||| ||||  |||| |||| |||||    
T  8255399 tgttttcataagttatcctaggtagtttaaggaaataaggtgaaaacaacttatgcacatgtcattagttgtttccataagttctctcaaatagttt 8255495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 28784856 - 28784793
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    |||||||||||||||| |||||||||    |||||||||||||| || ||||| |||||||||||    
T  28784856 ttttcataagctatcttagagagcttgtaaaaataagctgaaaa-agcttatgaacatgtcataa 28784793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 30918122 - 30918213
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||| | |||  ||||||||| ||||||||||||||||||  |||| || |||||| ||||| |||  |||| ||||| ||||||||    
T  30918122 ttttcataagttttcttggagagcttatggaaataagctgaaaacaacttat-gaaatgtcacaagttgttttcataagctctctcaaacagt 30918213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 38421306 - 38421342
Alignment:
Q  140 taagctgaaaacagtttatggacatgtcataagttat 176  Q
    |||||||||||||  ||||||||||||||||||||||    
T  38421306 taagctgaaaacaacttatggacatgtcataagttat 38421342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 41606947 - 41606899
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||| ||||||||||||||||||  || || ||||||||||||    
T  41606947 agagagcttatggaaataagctgaaaacaacttttgaacatgtcataag 41606899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 43709309 - 43709361
Alignment:
Q  145 tgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||| || |||| |||||||||||||||||||| |||| ||| ||||||||    
T  43709309 tgaaaatagcttatagacatgtcataagttatttccataagctcacccaaaca 43709361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 11264308 - 11264402
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||| |||  |||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||  ||||||||||||||    
T  11264308 tgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagttgattctatatgctctcccaaacagt 11264402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 195
Target Start/End: Original strand, 21952962 - 21953045
Alignment:
Q  112 ataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    ||||||||||  | ||||||||||||||||| || ||||||| |||||||||||||||||||| |||| |||| ||||||||||    
T  21952962 ataagctatcctatagagcttaaggaaataaactaaaaacaggttatggacatgtcataagttctttccataagctctcccaaa 21953045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 6987784 - 6987710
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||||| | || |||| ||||||||||||||    
T  6987784 gagagcttatggaaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaacagt 6987710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 11158420 - 11158365
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatgg 160  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  11158420 tgttttcataagctatcttagagagcttgtggaaataagctgaaaacagtttatgg 11158365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 2996580 - 2996674
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||||||||  |||||| || | ||||||| |||||| || |||||||||||||||||||| |||  |||| ||||| ||||||||    
T  2996580 tgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaacagt 2996674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 247
Target Start/End: Original strand, 14011241 - 14011383
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    ||||| ||||||||||||  ||||||||| ||||||||||||||||||| |||  ||||||| ||||  | |||  |||| |||||||||| ||||||||    
T  14011241 tgtttacataagctatcttggagagcttatggaaataagctgaaaacagcttaaagacatgtgataaactctttgcataagctctcccaaatagttttac 14011340  T
Q  205 aagcatttataatagcagataagttcaaataagaaaatccaaa 247  Q
    | |   ||||   || ||||||||||||| ||| |||||||||    
T  14011341 atgtgcttatgtaagtagataagttcaaagaagtaaatccaaa 14011383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 6978993 - 6978928
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagtttt 202  Q
    ||||||||||||||||| |||| |||||||||||||||||||| ||||  ||| ||||||||||||    
T  6978993 aaataagctgaaaacagcttatagacatgtcataagttatttcaataagttctgccaaacagtttt 6978928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 22684563 - 22684499
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||| |||||||| || |||||    
T  22684563 agagcttaaagaaataagctgaaaacagcttatggacatatcataagctatttctagaacctctc 22684499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 25896809 - 25896885
Alignment:
Q  127 gagcttaaggaaataagctgaaaacagtttatg----gacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||| | |||||||||||||||||||||||    ||||||||||||| ||||||||||| |||||| |||||||    
T  25896809 gagcttaggaaaataagctgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagt 25896885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 32769688 - 32769621
Alignment:
Q  112 ataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    |||||||||| | |||||||| | |||||||| |||||||||||||||||||||| ||||| ||||||    
T  32769688 ataagctatcccggagagcttgacgaaataaggtgaaaacagtttatggacatgttataagctatttc 32769621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 53673721 - 53673638
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactc 188  Q
    ||||||||||||||||||  ||||||||| | ||||||||||||||||  |||||||||| | ||| ||| |||| ||||||||    
T  53673721 tgttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatggacatatgatatgttgtttccataaactc 53673638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 23819096 - 23819190
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||||||||   ||||||||  |||||||| ||||||||  |||||||||||||||||| | |||   |||||||| |||||||||    
T  23819096 tgttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataagctgttttcttaaactcttccaaacagt 23819190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 27725261 - 27725315
Alignment:
Q  145 tgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||| |||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  27725261 tgaaaatagtttatggacatgtcataagttatttccataagctctctcaaacagt 27725315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 30207634 - 30207569
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    ||||||||||||||| || |||||| ||| ||||||||||||||||||| |||  |||||||||||    
T  30207634 tgttttcataagctaccttagagagattatggaaataagctgaaaacagcttacagacatgtcata 30207569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 2874684 - 2874608
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||||||||   ||| ||||| |||||||||| ||||| || |||||||||||||||||||| |||| ||||    
T  2874684 tttcataagctatccaggagtgcttatggaaataagcggaaaatagattatggacatgtcataagttgtttccataa 2874608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 29467668 - 29467620
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  29467668 agagagtttatggaaataagctgaaaacagcttatggacatgtcataag 29467620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 46415853 - 46415765
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    |||||||||||||||   |||||||||   |||| |||||||||||  |||||||||||||||| ||| |||  |||||||||||||||    
T  46415853 ttttcataagctatcctcgagagcttagtaaaattagctgaaaacaacttatggacatgtcataggttgtttgcataaactctcccaaa 46415765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 4798629 - 4798566
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtca 168  Q
    ||||||||||||||||||  ||||||||| | ||||||||| ||||||| ||||| ||||||||    
T  4798629 tgttttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtca 4798566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 3637423 - 3637377
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||||||||||||||||||||||||||| | |||||| |||||    
T  3637423 agcttaaggaaataagctgaaaacagtttatgaatatgtcacaagtt 3637377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 21157775 - 21157877
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    |||||||||| ||||||    |||||||| ||||||||||| ||||||| || || | |||||||||| | ||||| ||| |||| ||||||||| ||||    
T  21157775 tgttttcatatgctatcctgaagagcttatggaaataagctaaaaacagcttttgtaaatgtcataagctgtttctgtaagctcttccaaacagtcttac 21157874  T
Q  205 aag 207  Q
    |||    
T  21157875 aag 21157877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 27123395 - 27123321
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| ||||||||| ||||||||  |||  ||||||||||||||| |||| |||| ||||| ||||||||    
T  27123395 gagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagt 27123321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 4684137 - 4684072
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    |||||||||| ||||||| ||| ||||||||| ||||||||||   ||| ||||||||||||||||    
T  4684137 gaaataagctaaaaacagcttacggacatgtcttaagttattttactaagctctcccaaacagttt 4684072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 24929519 - 24929580
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaa 185  Q
    |||||||||| |||||||||||||||||| |||||| ||||| |||||| | |||| |||||    
T  24929519 agagagcttatggaaataagctgaaaacaatttatgaacatgccataagctgtttccataaa 24929580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 27721724 - 27721809
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    |||||||||||| ||||   ||||||||  | ||||||||||||||||| ||||||| |||||||||||  ||| ||||| |||||    
T  27721724 tgttttcataagttatcctggagagcttgcgaaaataagctgaaaacagcttatggatatgtcataagtagtttttataagctctc 27721809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 55084544 - 55084483
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgt 166  Q
    ||||||||| |||||||| |||||||||| | ||||||||||||| ||| ||||| ||||||    
T  55084544 tgttttcatgagctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 55084483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 1137722 - 1137786
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||| |||||  |||||||||| |||||||| |||||||||  ||||| ||||||||||||    
T  1137722 tttcataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatgtcataag 1137786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 41097285 - 41097225
Alignment:
Q  139 ataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||| |||||| || ||||||||||||||| |||| ||||||||| ||||||| ||||||    
T  41097285 ataagttgaaaatagcttatggacatgtcattagttgtttctataagctctcccgaacagt 41097225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 52754607 - 52754702
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    |||||||||||||||| || || | |||| ||||||||||||||| ||| ||||||||| |||||||  | |||  |||| |||| |||||||||||    
T  52754607 tgttttcataagctatttcggaaatctta-ggaaataagctgaaagcagcttatggacacgtcataaactgttttcataagctcttccaaacagttt 52754702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 825552 - 825485
Alignment:
Q  106 gttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagt 173  Q
    ||||||||||||||| |  |||| |||| | ||||||||||||||||||| |||  ||||||||||||    
T  825552 gttttcataagctattttggagaacttatgaaaataagctgaaaacagttaatgagcatgtcataagt 825485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 1075491 - 1075550
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaac 196  Q
    ||||||||| ||||| |||||||||||||||||||| | |||||| ||  ||||||||||    
T  1075491 aaataagcttaaaactgtttatggacatgtcataagctgtttctagaagttctcccaaac 1075550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 18628606 - 18628559
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaaca 152  Q
    |||||||||||| |||||  ||||||||| ||||||||||||||||||    
T  18628606 tgttttcataagttatcttggagagcttatggaaataagctgaaaaca 18628559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 19394807 - 19394732
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||| |||||||||||| |  ||| ||||| |||||| ||||||| ||||||||| ||||  ||||||||    
T  19394807 agagagcttatggaaataagctgtattcagcttatgtacatgtaataagttgtttctataagctctggcaaacagt 19394732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 28749930 - 28749891
Alignment:
Q  145 tgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  28749930 tgaaaacagtttatggacatgtaataagttatttccataa 28749891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 172
Target Start/End: Original strand, 30024745 - 30024780
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||||||||||| |||||||||||||||||    
T  30024745 aaataagctgaaaacagtatatggacatgtcataag 30024780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 43412389 - 43412448
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaa 185  Q
    |||||||| | ||||||| || ||||| ||||||||||||||||| | ||||||||||||    
T  43412389 agagcttatgcaaataagatggaaacaatttatggacatgtcatatgctatttctataaa 43412448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 45732700 - 45732759
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||| ||||||||||||||||||   |||| ||||||| ||| ||||||||||||    
T  45732700 gagagcttatggaaataagctgaaaacatcatatgaacatgtcgtaaattatttctataa 45732759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 50800063 - 50800024
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  50800063 ggaaataagctgaaaacagcttatagacatgtcataagtt 50800024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 488186 - 488120
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||||||||||  ||||  ||| | ||||||| ||||||||| ||||| ||||||||||||||    
T  488186 tttcataagctatcttggagaatttacgtaaataagatgaaaacagcttatgcacatgtcataagtt 488120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 1312868 - 1312942
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||| ||| ||||||||||||||||||||||||| | |||| ||||||| |||   ||||||||  ||||||||    
T  1312868 gagagtttatggaaataagctgaaaacagtttatgaatatgtaataagttgttttcgtaaactctatcaaacagt 1312942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 21043298 - 21043204
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||||    ||||| || | |||||  |||||||||| ||||| || ||||||||| | |||| |||| ||||||||||||||    
T  21043298 tgttttcataagctatcctgaagagcatatgaaaatacactgaaaacagcttatgaacgtgtcataagctgtttccataacctctcccaaacagt 21043204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 37636187 - 37636149
Alignment:
Q  167 cataagttatttctataaactctcccaaacagttttaca 205  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  37636187 cataagctgtttctataaactctcccaaacagttttaca 37636149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 47970323 - 47970405
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    ||||||||| | |||||||||||||||| |||||||| |||||| ||||  |||| |||| || |||  |||||||| |||||    
T  47970323 gagagcttatgcaaataagctgaaaacaatttatggaaatgtcacaagtagtttccataagctttccataacagtttcacaag 47970405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 161
Target Start/End: Original strand, 49219083 - 49219202
Alignment:
Q  40 tataagttacttctttagcaaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaa 139  Q
    ||||||||| |||| || ||||| |||||| ||||| |||   ||| ||| ||| ||| |||||||  |||||||| |||||| | |||| ||| |||||    
T  49219083 tataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgt--tttcataaactatcttaaagagattatggaaa 49219180  T
Q  140 taagctgaaaacagtttatgga 161  Q
    |||||||||||||  |||||||    
T  49219181 taagctgaaaacaacttatgga 49219202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 170
Target Start/End: Complemental strand, 10205941 - 10205908
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcata 170  Q
    ||||||||||||||||||||||| ||||||||||    
T  10205941 aaataagctgaaaacagtttatgaacatgtcata 10205908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 28614864 - 28614787
Alignment:
Q  112 ataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    ||||||||||  ||||| |||| | |||||||||||||| || ||||||| ||||||||| || |||| |||| ||||    
T  28614864 ataagctatcctagagaacttatgaaaataagctgaaaagagcttatggatatgtcataaattgtttccataagctct 28614787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 28615530 - 28615599
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||| ||| |||||||  ||||||||| ||||||||| |||||| |  | ||||||||||||||||||    
T  28615530 tgtttttataggctatcttggagagcttatggaaataaggtgaaaatatctaatggacatgtcataagtt 28615599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 42121495 - 42121563
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||| ||||||||  |||| |||  |||||||||||| |||||| ||||| ||||||||||||||    
T  42121495 tgttttcatgagctatcttggagaacttgtggaaataagctg-aaacagcttatgaacatgtcataagtt 42121563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 43824313 - 43824382
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||| ||||||||||||||||||  ||||| ||||| ||||||  |||| |||| | |||||||||||    
T  43824313 agcttatggaaataagctgaaaacaacttatgaacatgccataagccatttttatatattctcccaaaca 43824382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 45128350 - 45128281
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||| ||||||||||||||||||| | |||||||||  || |||| |||| |||| ||||| ||||||    
T  45128350 agcttatggaaataagctgaaaacagctcatggacatgatatcagttgtttccataagctctctcaaaca 45128281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 145
Target Start/End: Original strand, 46328437 - 46328474
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagct 145  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  46328437 tttcataagctatcttagagagcttaaggaaatcagct 46328474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 3176137 - 3176065
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    ||||||||||||||||||  |||| |||||| |||||| | |||  |||| |||||| ||||||||| |||||    
T  3176137 ggaaataagctgaaaacaacttatagacatgacataagatgttttcataagctctcctaaacagtttcacaag 3176065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 7694073 - 7694009
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcat 169  Q
    |||||||||||| ||||   ||||| ||| ||||||||||||||||||  ||||| |||||||||    
T  7694073 tgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcat 7694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 10812545 - 10812605
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    ||||||||||||||||||||| ||| ||||| || ||||| |||| |||| ||||| ||||    
T  10812545 ggaaataagctgaaaacagttcatgtacatgacaaaagttgtttccataagctctctcaaa 10812605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 19429525 - 19429481
Alignment:
Q  155 ttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||||||| | || |||| ||||||||||||||    
T  19429525 ttatggacatgtcataagttttctccataagctctcccaaacagt 19429481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 19429723 - 19429771
Alignment:
Q  112 ataagctatctcagagagcttaaggaaataagctgaaaacagtttatgg 160  Q
    ||||||||||   ||||||||| ||||||||||||||||||| ||||||    
T  19429723 ataagctatcctggagagcttatggaaataagctgaaaacagcttatgg 19429771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 31006025 - 31006073
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacag 153  Q
    |||||||||||||||||  ||| | |||| |||||||||||||||||||    
T  31006025 tgttttcataagctatcatagataacttacggaaataagctgaaaacag 31006073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 36048542 - 36048582
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctga 147  Q
    |||||| ||||||||| |||||||||| |||||||||||||    
T  36048542 ttttcaaaagctatcttagagagcttatggaaataagctga 36048582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 44119293 - 44119253
Alignment:
Q  35 ttatatataagttacttctttagcaaaagataaaacaaagt 75  Q
    |||| ||||||||| |||| |||||||||||||||||||||    
T  44119293 ttatgtataagttatttctatagcaaaagataaaacaaagt 44119253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 51555920 - 51555880
Alignment:
Q  138 aataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    |||||||||||||||| |||||||||||| ||||| |||||    
T  51555920 aataagctgaaaacagcttatggacatgttataagctattt 51555880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 53155299 - 53155359
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    ||||||||||||| || ||||| ||||||||||||||| |||  |||| ||||| ||||||    
T  53155299 aaataagctgaaagcaatttatagacatgtcataagttgtttgcataagctctcacaaaca 53155359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 78)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 32821816 - 32821910
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||||  | ||||||||  ||||||| |||||||||| |||||||||||||||||||| |||||||||||||| |||||||||    
T  32821816 tgttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctataaactcttccaaacagt 32821910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 34652097 - 34652020
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||||||||||  ||||||||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttctataa 34652020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 17221604 - 17221509
Alignment:
Q  104 gtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||||||||  ||||| |||| ||||||||||| |||| |||||||||| |||||||||| |||||| |||| |||| || ||||||    
T  17221604 gtgttttcataagctatccgagagatcttacggaaataagctaaaaaaagtttatggatatgtcataagatatttccataagctcttccgaacagt 17221509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 36852479 - 36852550
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttat 176  Q
    ||||||||||||||||||  ||||||||| |||||||| ||||||| ||||||| |||||||||||||||||    
T  36852479 tgttttcataagctatcttggagagcttatggaaataatctgaaaatagtttatagacatgtcataagttat 36852550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 105 - 247
Target Start/End: Original strand, 15120190 - 15120332
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    ||||||| |||||||||   |||||||||   ||||||||| ||||||| | ||| |||||||||||||| |||| |||| ||||||||||||| || ||    
T  15120190 tgttttcgtaagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaacagattcac 15120289  T
Q  205 aagcatttataatagcagataagttcaaataagaaaatccaaa 247  Q
    ||   |||||  ||| |||||||||||||||||  ||||||||    
T  15120290 aactgtttatgctagtagataagttcaaataagtcaatccaaa 15120332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 43456740 - 43456628
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataagttcaaat 234  Q
    ||||||||||||||||||||||||||||||||||| |||| |||  | || ||||  |||||||| |||||||  |||||   || | ||||||||||||    
T  43456740 ggaaataagctgaaaacagtttatggacatgtcatgagttgttttcacaagctctttcaaacagtcttacaagtgtttatgtgagtaaataagttcaaat 43456641  T
Q  235 aagaaaatccaaa 247  Q
    ||| |||||||||    
T  43456640 aagtaaatccaaa 43456628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 5781685 - 5781743
Alignment:
Q  114 aagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  5781685 aagctatcatagagagcttatggaaataagctgaaaacagtttatgcacatgtcataag 5781743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 14299694 - 14299600
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||| | |||||||  || ||||||  ||||||||||||||||| | |||||| |||||||||||| |||| ||||||||| |||||||||    
T  14299694 tgttttcacaggctatctttgacagcttatagaaataagctgaaaacaatgtatggatatgtcataagttgtttccataaactcttccaaacagt 14299600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 1939395 - 1939326
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||||||||    ||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  1939395 tgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagtt 1939326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 33942112 - 33942226
Alignment:
Q  58 caaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagttta 157  Q
    |||||||||||| ||||| ||||  ||| ||||||| ||| |||||||  |||||||||| |||  |||||||| | | |||| |||||||||||| |||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttgt--tttcataagccatcatagagagctaatgaaaattagctgaaaacagctta 33942209  T
Q  158 tggacatgtcataagtt 174  Q
    || ||||||||||||||    
T  33942210 tgaacatgtcataagtt 33942226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 43065513 - 43065444
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||||||| ||||   |||||||||  ||||||||||||||||| |||||||||||||||||||||    
T  43065513 tgttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagtt 43065444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 43985237 - 43985318
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    |||||||| ||||| ||| |||||| || |||||||||||||||||||| ||||  ||| ||||| ||||||||||||||||    
T  43985237 agagcttatggaaacaagttgaaaaaagcttatggacatgtcataagttgtttcagtaatctctctcaaacagttttacaag 43985318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 10285868 - 10285940
Alignment:
Q  106 gttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    |||| ||||||||| |  ||||| |||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  10285868 gtttgcataagctaacatagagaacttatggaaataagttgaaaacagcttatggacatgtcataagttattt 10285940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 5826224 - 5826291
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||| || |||||  |||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  5826224 tgttttcaaaaactatcatagagagcttacgtaaataagctgaaaacagtttatgcacatgtcataag 5826291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 43205316 - 43205395
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||||||||||| | ||||||||| ||||||||| ||||||||||||  |||||||| ||| ||| |||| ||||    
T  43205316 tgttttcataagctatcacggagagcttatggaaataagttgaaaacagtttgcggacatgttatatgttgtttccataa 43205395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 750357 - 750423
Alignment:
Q  104 gtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    ||||||||||||||||||  |||||||||| ||| | ||| || |||||||||||||||||||||||    
T  750357 gtgttttcataagctatcatagagagcttatggagacaagttgcaaacagtttatggacatgtcata 750423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 5133779 - 5133873
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||| ||| ||||| |||||||||| |||||||||||||||  || |||||  ||||||||||||| ||| ||||| | || |||||||||    
T  5133779 tgttttcaaaagttatctaagagagcttatggaaataagctgaaagtagcttatgaccatgtcataagttgtttttataatcccttccaaacagt 5133873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 35993443 - 35993349
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||| |||||||||||  ||||| |||| | |||||||||||||||| |||||||||| |||||||  | ||| ||| | ||||||||||||||    
T  35993443 tgtttgcataagctatcatagagaacttatgaaaataagctgaaaacaatttatggacacgtcataaactgtttatatcagctctcccaaacagt 35993349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 18884899 - 18884976
Alignment:
Q  130 cttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    |||| |||||||| |||||||||| | ||||| |||||||||| | ||||||||| |||||||||||||  |||||||    
T  18884899 cttatggaaataatctgaaaacagctaatggaaatgtcataagctgtttctataagctctcccaaacagccttacaag 18884976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 25661135 - 25661208
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||| |||||||| |||||||||||||| |||||| ||||||| ||||||  ||| |||| |||||||||    
T  25661135 agagcttatggaaataatctgaaaacagtttaaggacatttcataagctatttccgtaagctctgccaaacagt 25661208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 128 - 245
Target Start/End: Original strand, 39621981 - 39622098
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataag 227  Q
    ||||||||||||||||||||||||| |||||| |  ||||||||||| |||  ||||  |||| |||||||| |  ||||   |||||  || |||||||    
T  39621981 agcttaaggaaataagctgaaaacaatttatgaatttgtcataagttgttttcataagttctctcaaacagtgtcgcaagtgcttatacaagtagataag 39622080  T
Q  228 ttcaaataagaaaatcca 245  Q
    |||||||||| |||||||    
T  39622081 ttcaaataagtaaatcca 39622098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 5452367 - 5452427
Alignment:
Q  139 ataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||| |||| ||||| |||||||||||||| ||||||||| |||| |||||||||    
T  5452367 ataagctgaatacagcttatgtacatgtcataagttttttctataatctcttccaaacagt 5452427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 10285356 - 10285428
Alignment:
Q  99 aagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    ||||||| || ||||| ||||||  ||| | |||||| ||||||||||||||||| |||||||||||||||||    
T  10285356 aagttgttttctcataggctatcatagataacttaagaaaataagctgaaaacagcttatggacatgtcataa 10285428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 16503317 - 16503454
Alignment:
Q  61 aagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatg- 159  Q
    ||||||||||||| | ||||  ||||||| ||| ||| ||||| |  | ||||||| |||||  ||||| ||| | ||||||||||||| | | |||||     
T  16503317 aagataaaacaaattcaaacagtttccatataagctataagttct--tctcataagttatcttggagaggttatgaaaataagctgaaaccggcttatgt 16503414  T
Q  160 gacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||| ||||||| ||| ||||||||||||||    
T  16503415 gacatgtcataagctatttctctaagctctcccaaacagt 16503454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 27237936 - 27237860
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    ||||| ||| ||||||||||| ||||||| ||||| |||||||||||| | |||||||||  ||| |||||||||||    
T  27237936 gagagtttatggaaataagctaaaaacagcttatgtacatgtcataagctgtttctataagttctaccaaacagttt 27237860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 37186349 - 37186281
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagtttta 203  Q
    ||||||| ||||||||||| | |  ||||||||||||||| ||||||||| |||||| |||||||||||    
T  37186349 ggaaatatgctgaaaacagctcacagacatgtcataagttgtttctataatctctccgaaacagtttta 37186281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 42131626 - 42131698
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    |||||||||||||||   |||| |||||||||||||||| ||| ||| |||||||||||| ||||||| ||||    
T  42131626 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgttataagttgtttc 42131698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 1830048 - 1830144
Alignment:
Q  105 tgttttcataagctatctcagagag----cttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    ||||||||||||||||| ||| |||    |||| |||||||||||||||||    ||||||||||||||||| | |||| |||| ||||||||||||    
T  1830048 tgttttcataagctatcccagtgagtcagcttatggaaataagctgaaaactccctatggacatgtcataagatgtttccataagctctcccaaaca 1830144  T

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Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 24098129 - 24098209
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    ||||||||| |||||||||||||||||||||||||| ||||| || | || ||||| ||| ||||  |||| |||||||||||    
T  24098129 gagagcttatggaaataagctgaaaacagtttatgggcatgttattaattgtttctgtaagctct--caaatagttttacaag 24098209  T

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Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 30538204 - 30538157
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||||    
T  30538204 aaataagctgaaaacaacttatggacatgtcataagttgtttctataa 30538157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 30552705 - 30552610
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaa-cagtttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    ||||||||| |||||  |||||||||| ||||||||||| |||| ||  |||| ||||||||||||||| |||| |||| || || ||||||||||    
T  30552705 ttttcataaactatcctagagagcttatggaaataagctaaaaaccaacttattgacatgtcataagttgtttcgataacctatctcaaacagttt 30552610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 1494477 - 1494415
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| |||||||||||||||||||||||||| | |||  |||| ||||| ||||||||    
T  1494477 aaataagctaaaaacagtttatggacatgtcataagctgttttcataagctctctcaaacagt 1494415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 7283003 - 7283077
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    |||||||||||||||| |  ||||||||| ||| ||||| ||||||||  |||||||||| ||||||||| ||||    
T  7283003 tgttttcataagctatgtgggagagcttatggatataagatgaaaacaacttatggacatatcataagttgtttc 7283077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 9174822 - 9174892
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggac-atgtcataagtt 174  Q
    |||||||||||||||||| | |||||||| | |||||||||||||| || ||||| || ||||||||||||    
T  9174822 tgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagtt 9174892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 9478336 - 9478438
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataagttcaaat 234  Q
    |||| |||| ||||||||| |||||||||||| ||||||| |||  |||||||||| ||||||||   ||||| | ||||  | | ||||||||||||||    
T  9478336 ggaagtaagatgaaaacagcttatggacatgtaataagttgtttgcataaactctctcaaacagtcacacaagtacttatgttggtagataagttcaaat 9478435  T
Q  235 aag 237  Q
    |||    
T  9478436 aag 9478438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 10563621 - 10563556
Alignment:
Q  105 tgttttcataagctat-ctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    |||||||||||||||| || | |||||||||| |||||||||||||| || ||||||||||||||||    
T  10563621 tgttttcataagctatgctga-agagcttaagaaaataagctgaaaatagcttatggacatgtcata 10563556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 11344793 - 11344731
Alignment:
Q  145 tgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    |||||||||||||||||||||||||||||| |||| ||||  |||  |||||||||| |||||    
T  11344793 tgaaaacagtttatggacatgtcataagttgtttccataaggtctgtcaaacagtttcacaag 11344731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 39962312 - 39962266
Alignment:
Q  155 ttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||    
T  39962312 ttatggacatgtcataaattgtttctataagctctcccaaacagttt 39962266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 787341 - 787406
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||| |||||| |||  | ||| ||| ||||||||||||||| ||||||||||||||||||    
T  787341 ttttcataaactatcttagatggtttatggagataagctgaaaacagcttatggacatgtcataag 787406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 41809299 - 41809234
Alignment:
Q  114 aagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    ||||||||| ||| |||||| ||||||||||| ||||||  ||||| |||||||||||||| ||||    
T  41809299 aagctatcttagaaagcttatggaaataagctaaaaacaacttatgaacatgtcataagttgtttc 41809234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 44269010 - 44269075
Alignment:
Q  142 agctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    ||||||||||| ||||||||||||||||||||| ||| | ||| |||||| |||| || |||||||    
T  44269010 agctgaaaacaatttatggacatgtcataagttgtttttgtaagctctccaaaacggtcttacaag 44269075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 1647262 - 1647310
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||| ||||||||||||||||||| |||||  |||||||||||    
T  1647262 agagagcttatggaaataagctgaaaacagcttatgagcatgtcataag 1647310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 9878745 - 9878661
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    |||||||||  |||||| | |||||||| | ||||||||  |||||||  |||||||||||||||||||| |||| |||| ||||    
T  9878745 tgttttcattcgctatcccggagagcttgaagaaataagtcgaaaacaacttatggacatgtcataagttgtttccataagctct 9878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 9996777 - 9996877
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataagttcaaataa 236  Q
    ||||||| ||| |||| |||||||  |||||||||||| ||||||||| ||||||||| |||| | ||||| | ||||  |||  |||||| ||||||||    
T  9996777 aaataagttgagaacaatttatgggtatgtcataagttgtttctataagctctcccaagcagtctcacaagtacttatgctagttgataagctcaaataa 9996876  T
Q  237 g 237  Q
    |    
T  9996877 g 9996877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 35379079 - 35379015
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcat 169  Q
    ||||||||||||||||||  ||||||||| | ||||||||||||||||  ||||| ||| |||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcat 35379015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 41817177 - 41817269
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| |||||   ||||||||| ||||||||||||||||||  ||||  |||||||||||| | |||  ||||| ||||| |||||||    
T  41817177 ttttcataaactatcctggagagcttatggaaataagctgaaaacaaattatcaacatgtcataagatgttttcataaattctcctaaacagt 41817269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 12215834 - 12215893
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||| || |||| | ||||||||| |||||||||||||||||| |||||| ||||    
T  12215834 gagagcttatgggaatatggtgaaaacagcttatggacatgtcataagctatttccataa 12215893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 14451083 - 14451044
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  14451083 ggaaataagctgaaaacagcttatggtcatgtcataagtt 14451044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 29316838 - 29316771
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||| ||||||||  |||| |||| |||||||||||||||| |  ||||| ||||||||||||    
T  29316838 tgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataag 29316771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 38388718 - 38388785
Alignment:
Q  130 cttaaggaaataagctgaaaa-cagtttatggacatgtcataagttatttctataaactctcccaaac 196  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||| || | ||||  ||||||||||    
T  38388718 cttatggaaataagctgaaaaacagtttatgaacatgtcataagttgttaccataagttctcccaaac 38388785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 43635141 - 43635074
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    |||||| | ||||||||| ||||||| |||  ||||||||||||||| ||||||||  ||||||||||    
T  43635141 agcttatgaaaataagcttaaaacagcttacagacatgtcataagttttttctatatgctctcccaaa 43635074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 1742095 - 1742005
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    ||||||||||| |||||    |||| ||| ||||||||| |||| | || ||||| |||||||||||||| |||| |||| ||||||||||    
T  1742095 tgttttcataatctatcatgaagagtttatggaaataagttgaagatagcttatgcacatgtcataagttgtttccataagctctcccaaa 1742005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 9595267 - 9595349
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    ||||||||| |||||| | |  ||||| | |||||||||||||| |||| |||||||||||||||| | |||  |||||||||    
T  9595267 ttttcataaactatcttaaaatgcttatgaaaataagctgaaaatagttcatggacatgtcataagatgttttcataaactct 9595349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 25796244 - 25796190
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    ||||||||||  |||||||||||||||||  ||||||| |||| |||||||||||    
T  25796244 agagagcttattgaaataagctgaaaacaacttatggatatgtaataagttattt 25796190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 29633082 - 29633152
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatt 177  Q
    |||||||||||||||  | | ||||||   ||||| ||||||||||| ||||||| |||||||||||||||    
T  29633082 ttttcataagctatcctaaatagcttatcaaaatatgctgaaaacagcttatggagatgtcataagttatt 29633152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 33256779 - 33256837
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    ||||||||||| ||||||||||| |||||||||||| | |||  |||| ||||||||||    
T  33256779 aaataagctgagaacagtttatgaacatgtcataagctgttttcataagctctcccaaa 33256837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 39539711 - 39539749
Alignment:
Q  160 gacatgtcataagttatttctataaactctcccaaacag 198  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  39539711 gacatgtcataagttgtttctataaattctcccaaacag 39539749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 40279414 - 40279472
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggaca 163  Q
    |||||||||||||||| |  |||| |||| | ||||||| |||||||||||||||||||    
T  40279414 tgttttcataagctatattggagaacttatgaaaataagttgaaaacagtttatggaca 40279472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 680512 - 680577
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||||||||||   ||| |||  | ||||||||||||||||||||||  ||||||||||||    
T  680512 ttttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataag 680577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 6547939 - 6547976
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  6547939 ggaaataagctgaaaacagcttatggacatggcataag 6547976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 9556246 - 9556335
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaa 194  Q
    |||||||||||||||||  ||| |||||| | ||||||| ||||| |   ||||||||||||||| |||| |||  |||| |||||||||    
T  9556246 tgttttcataagctatcctagaaagcttatgaaaataagttgaaatctacttatggacatgtcattagttgttttcataagctctcccaa 9556335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 14316177 - 14316104
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagca 209  Q
    |||||||||||||||||| ||||  | |||||||||||| |||| |||| |||||| ||| ||| | |||||||    
T  14316177 gaaataagctgaaaacagcttatacatatgtcataagttgtttccataagctctccaaaatagtctcacaagca 14316104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 17952834 - 17952748
Alignment:
Q  33 gcttatatataagttacttctttagcaaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatc 121  Q
    ||||||||||||| || |||| || |||||||||||| ||||| ||||  ||| ||| ||| |||||||   |||||||||||||||||    
T  17952834 gcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaag--atgttttcataagctatc 17952748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 22681248 - 22681187
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgt 166  Q
    ||||||||||| |||||  ||||| |||| ||||||||||| ||||||| ||||| ||||||    
T  22681248 tgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgt 22681187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 28933831 - 28933923
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    |||||||||||||||||  |||||||| |  |||||||| |||||||||  |||| ||||| |||||||| |||  |||| |||| ||||||||    
T  28933831 tgttttcataagctatcctagagagctgatagaaataagttgaaaacag-ctatgaacatgccataagttgttttcataagctcttccaaacag 28933923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 32364782 - 32364693
Alignment:
Q  117 ctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaa 206  Q
    |||||| ||||| |||| | ||||||||||||||||  | ||||||| |||||||| |  || ||||| |||||||||||| ||| ||||    
T  32364782 ctatcttagagatcttatgaaaataagctgaaaacaactcatggacacgtcataagctggttttataagctctcccaaacaatttcacaa 32364693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 37845397 - 37845364
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcat 169  Q
    ||||||||||||||| ||||||||||||||||||    
T  37845397 gaaataagctgaaaatagtttatggacatgtcat 37845364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 42420006 - 42420071
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||||||||   || |||||| |||||| ||||||||||| |||||| ||||| ||||||    
T  42420006 ttttcataagctatcctggatagcttatggaaatgagctgaaaacaatttatgaacatgacataag 42420071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 44438872 - 44438835
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  44438872 ggaaataagctgaaaacaggttatgaacatgtcataag 44438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 204
Target Start/End: Original strand, 3611233 - 3611333
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatgga-catgtcataagttatttctataaactctcccaaacagtttta 203  Q
    |||||||| |||||||||  |||| |||| | ||||||||| ||||||||||||| |  |||||||||||| ||| |   || ||||||||||||| |||    
T  3611233 tgttttcacaagctatcttggagaacttatgaaaataagctaaaaacagtttatgaataatgtcataagttgtttttcgtaaatctcccaaacagtctta 3611332  T
Q  204 c 204  Q
    |    
T  3611333 c 3611333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 3973549 - 3973605
Alignment:
Q  112 ataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtca 168  Q
    ||||||||||  || ||| ||| ||||||||||||||||||| ||||||||| ||||    
T  3973549 ataagctatcctagggagtttatggaaataagctgaaaacaggttatggacacgtca 3973605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 4550804 - 4550848
Alignment:
Q  155 ttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||| |||||||||||||| |||| |||| ||||||||||||||    
T  4550804 ttatgaacatgtcataagttgtttccataagctctcccaaacagt 4550848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 10198543 - 10198479
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcat 169  Q
    |||||| |||| |||||  |||||| ||| ||||||||||||| ||||| ||||| |||||||||    
T  10198543 tgtttttataatctatcctagagagattatggaaataagctgacaacagcttatgaacatgtcat 10198479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 12313236 - 12313144
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    ||||| ||||||||||||  ||||||||| | ||||||| ||||| ||  ||||| ||||| |||||| | |||  ||||| |||||||||||    
T  12313236 tgtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctcccaaaca 12313144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 27699562 - 27699498
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||||||  | |||  |||||||||||| |||  |||||||||| ||||||||    
T  27699562 ggaaataagctgaaaacagcatgtggtgatgtcataagttgttttcataaactctctcaaacagt 27699498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 32634342 - 32634386
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaa 149  Q
    |||||||||||||||| ||||| |||||| | |||||||||||||    
T  32634342 tgttttcataagctatatcagaaagcttatgaaaataagctgaaa 32634386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 36415736 - 36415645
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||||||||||||||    ||| |||| | ||||||| ||||||||  ||||| |||||| ||||||| |||||||||  |||||||||||    
T  36415736 tgttttcataagctatcatgtagaacttacgaaaataagatgaaaacaacttatgcacatgt-ataagttgtttctataagttctcccaaaca 36415645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 44443330 - 44443394
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    ||||||||||||||||  |||||| || | ||||||||||||||||  ||||| |||| ||||||    
T  44443330 ttttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatgaacatttcataa 44443394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 37273141 - 37273235
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||||||||  |||| |||| ||||||||| ||||||||  |||||||||||||||||||| |||| |||| ||||||||||||||    
T  37273141 tgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagt 37273235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 11253511 - 11253602
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||||  |||||||||| ||||||| |||||||||||||||| || |||||||||||| ||| |||||| ||| |||||||||    
T  11253511 tttcataagctatcctagagagcttagggaaataggctgaaaacagtttatagatatgtcataagttgtttttataaattctgccaaacagt 11253602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 31010409 - 31010501
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    ||||||| ||| |||||  |||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||||||| || || ||||||    
T  31010409 tgttttcgtaacctatcatagagagcttatggaattaagctgaaaacagcttatggacatgtcataagttgtttctataagctttcacaaaca 31010501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 43115083 - 43115155
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||| |||| ||||||||| |||||||    
T  43115083 gagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactcttccaaaca 43115155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 105 - 207
Target Start/End: Complemental strand, 36646445 - 36646343
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    |||||||||||||||||  |||||| |||  |||||||| ||||||||| ||||||||||| |||||||  |||| |||| |||||||||| ||| ||||    
T  36646445 tgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatgccataagtggtttccataagctctcccaaatagtcttac 36646346  T
Q  205 aag 207  Q
    |||    
T  36646345 aag 36646343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 43397836 - 43397918
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    |||||||||| |||| | ||||||||| |||| |||| |||||||| ||||||||||||| ||||| ||||||||||||||||    
T  43397836 ttttcataagttatcgcggagagcttatggaagtaagttgaaaacaatttatggacatgttataagctatttctataaactct 43397918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 24624217 - 24624319
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    |||||||||| ||||||  ||| | |||| |  ||||||||||||||||||||||||||||||||||| | |||  |||| |||| ||||||||| ||||    
T  24624217 tgttttcataggctatcctagaaatcttatgttaataagctgaaaacagtttatggacatgtcataagctgttttcataagctcttccaaacagtcttac 24624316  T
Q  205 aag 207  Q
    |||    
T  24624317 aag 24624319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 41644508 - 41644414
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||||| ||||| | |||||  ||||| ||| |||||  ||||| |||||||    
T  41644508 tgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaaaatgtcccaagttgtttttataagttctcctaaacagt 41644414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 52323959 - 52323863
Alignment:
Q  105 tgttttcataagctatctcagagagctta--aggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||| |||||||||||  |||||||||   ||||||||| ||||||||| |||||||| |||||||| ||||||| |||| ||||| ||||||||    
T  52323959 tgttttgataagctatcttggagagcttatgtggaaataagttgaaaacagcttatggacgtgtcataaattatttcaataagctctcacaaacagt 52323863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 53848124 - 53848052
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    ||||||||| ||||| |||||||||||  ||||||||| |||||||| |||||||||||||| |||| |||||    
T  53848124 ttttcataaactatcccagagagcttatagaaataagccgaaaacagcttatggacatgtcacaagtcatttc 53848052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 22214722 - 22214659
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtca 168  Q
    |||||||||||||||||  |||||  ||| ||||||||||||||||||| ||||||||||||||    
T  22214722 tgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacatgtca 22214659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 14598585 - 14598523
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    |||||||| || |||||  ||||||||||||||||||||||||| |||||||| |||||||||    
T  14598585 gaaataagttggaaacaacttatggacatgtcataagttatttccataaactcccccaaacag 14598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 20192649 - 20192575
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| |||||| || ||||||||| |||||||||||||||||| | ||||||||| ||||| || |||||    
T  20192649 gagagcttatggaaatgagttgaaaacagcttatggacatgtcataagctgtttctataagctctctcatacagt 20192575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 21574517 - 21574591
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| ||||||||||| ||| ||| ||||| |||||||||||||| |||  |||| ||||||||||||||    
T  21574517 gagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctctcccaaacagt 21574591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 20669179 - 20669244
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    ||||||||||||||||||  ||||||||| | |||||||| |||||||| ||||| ||||||||||    
T  20669179 tgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcata 20669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 31710950 - 31710857
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    ||||||| ||| |||||| |||||||||  |||| |||||||||||||| | |||| ||||||||||||| ||| ||||| || || |||||||    
T  31710950 tgttttcttaacctatcttagagagcttttggaattaagctgaaaacagctcatgggcatgtcataagttgtttttataagctttcacaaacag 31710857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 31711205 - 31711112
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    ||||||| ||| |||||| |||||||||  |||| |||||||||||||| | |||| ||||||||||||| ||| ||||| || || |||||||    
T  31711205 tgttttcttaacctatcttagagagcttttggaattaagctgaaaacagctcatgggcatgtcataagttgtttttataagctttcacaaacag 31711112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 48049045 - 48048976
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||| ||||||||  | ||| ||| ||||||||||||||||||| ||||||||||||||| ||||    
T  48049045 tgttttcattagctatcttggggaggttatggaaataagctgaaaacagcttatggacatgtcatgagtt 48048976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 49465978 - 49465909
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    |||| ||| ||||||||| |||||| |||| |||||||||||||||||| ||||||||| ||||| ||||    
T  49465978 agagtttatggaaataagttgaaaatagttcatggacatgtcataagttgtttctataagctctcacaaa 49465909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 237404 - 237464
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatg 165  Q
    |||||||||||| ||||  | |||||||| ||||||||||||||||||| |||||||||||    
T  237404 tgttttcataagttatcctatagagcttacggaaataagctgaaaacagcttatggacatg 237464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 179
Target Start/End: Original strand, 2201092 - 2201209
Alignment:
Q  60 aaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatg 159  Q
    |||||||||||||||| ||||  ||| ||| ||| ||| |||   ||||||||| ||||||||  || || ||||||||| |||||||||| ||||||||    
T  2201092 aaagataaaacaaagtcaaactgttttcatataagctataag--ctgttttcattagctatcttggatagtttaaggaaaaaagctgaaaagagtttatg 2201189  T
Q  160 gacatgtcataagttatttc 179  Q
     |||| ||||||||| ||||    
T  2201190 aacatatcataagttgtttc 2201209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 30923962 - 30923894
Alignment:
Q  104 gtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||||| |||||  |||||| |||  |||||||||||||||||| |||| |||||||||||||    
T  30923962 gtgttttcataacctatcctagagagtttatagaaataagctgaaaacagcttatagacatgtcataag 30923894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 44488892 - 44488956
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||| | | |||| ||||||||||    
T  44488892 ttttcataagctatcttagagaacttatggaaataagctgaaaaccgctcatgggcatgtcataa 44488956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 50952347 - 50952407
Alignment:
Q  112 ataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||| ||||||  ||||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  50952347 ataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataag 50952407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 195
Target Start/End: Complemental strand, 2081139 - 2081056
Alignment:
Q  112 ataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    |||||||||||| ||||||| | ||||||||||||||||||  ||| |||  |||||| || |||||| |||| ||||||||||    
T  2081139 ataagctatctcggagagctaatggaaataagctgaaaacaacttaaggatgtgtcattagctatttccataagctctcccaaa 2081056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 22232882 - 22232925
Alignment:
Q  147 aaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  22232882 aaaacaatttatggacatgtcataagttgtttctataaactctc 22232925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 34924599 - 34924536
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    |||||||||||||||| |||||||||| | ||||||||||||||||   ||||||| |||||||    
T  34924599 ttttcataagctatcttagagagcttatgaaaataagctgaaaacaacatatggacttgtcata 34924536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 39602273 - 39602206
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||||||||||||  |||| |||| | ||||||| |||||||| |||||| ||||||||||||    
T  39602273 tgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataag 39602206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 43948662 - 43948717
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatgg 160  Q
    ||||||||||||||||||  || ||||| |||||||||||||||||||| ||||||    
T  43948662 tgttttcataagctatcttggaaagcttgaggaaataagctgaaaacagcttatgg 43948717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 8933794 - 8933888
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||| |||||  ||||||||| | ||||||||| ||  ||  || ||||||||||||||| ||||||  ||| ||||||||||||||    
T  8933794 tgttttcataagttatcttggagagcttatgaaaataagctaaatgcaacttttggacatgtcataagctatttccttaatctctcccaaacagt 8933888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 174
Target Start/End: Original strand, 10357378 - 10357509
Alignment:
Q  41 ataagttacttctttagcaaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaat 140  Q
    |||||||| |||| || |||||||||||| || ||||||  |||| ||| |||  ||||||||||  |||||||||| |||| ||||||||||  |||||    
T  10357378 ataagttatttctataacaaaagataaaataatgttaaatttttttcatataagatacaagttgt--tttcataagccatcttagagagcttactgaaat 10357475  T
Q  141 aagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||   ||||| || ||||  ||||||||||||||    
T  10357476 aactcgaaaatagcttatatacatgtcataagtt 10357509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 24887346 - 24887281
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    |||||||||||||||||   ||||||||| || |||||||||||||||||| || ||||||||||||    
T  24887346 tgttttcataagctatcctggagagcttatgggaataagctgaaaacagttaat-gacatgtcataa 24887281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 38462288 - 38462354
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    |||||||||||||||||  ||| |||||| ||||||||||||||||||  |||||| || |||||||    
T  38462288 tgttttcataagctatccaagatagcttatggaaataagctgaaaacaacttatggtcaagtcataa 38462354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 41633367 - 41633453
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcc 191  Q
    ||||||||| |||||| |  ||||||||| | |||||||||||||||| ||||| |||||||||| | || ||| ||||| ||||||    
T  41633367 tgttttcatcagctattttggagagcttatgaaaataagctgaaaacaatttatagacatgtcatgatttgtttttataacctctcc 41633453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 6483812 - 6483873
Alignment:
Q  109 ttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    |||||||||||||  ||||||||||   |||||||||||||||||||| ||| |||||||||    
T  6483812 ttcataagctatcctagagagcttattaaaataagctgaaaacagtttgtggccatgtcata 6483873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 13804804 - 13804853
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||| |||||| ||||||| ||||||||| ||||||||||||||||||||    
T  13804804 gagaacttaagaaaataagttgaaaacagcttatggacatgtcataagtt 13804853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 23249565 - 23249630
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    |||||||||||||||||| ||| |||||| || | || |||||||| ||||||||||| |||||||    
T  23249565 tgttttcataagctatcttagaaagcttatgggattatgctgaaaatagtttatggacgtgtcata 23249630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 33883813 - 33883748
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    ||||| |||||||||||| ||||| |||| | ||||||||||||||||  ||||| ||||||||||    
T  33883813 tgtttacataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaacatgtcata 33883748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 48528563 - 48528632
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||||||||    ||||| |||  |||||||||||||||| ||||||||||||| ||||||||    
T  48528563 tgttttcataagctattctggagagtttatagaaataagctgaaaactgtttatggacatgccataagtt 48528632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 52412965 - 52412888
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    |||||||||| | ||  ||||||| || ||||||||||||||||||| ||||  |||||||||| ||| |||||||||    
T  52412965 ttttcataagttgtcctagagagcatatggaaataagctgaaaacagcttataaacatgtcataggttgtttctataa 52412888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 21862233 - 21862177
Alignment:
Q  110 tcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgt 166  Q
    |||| ||||||||  ||||||||| ||||||||||||||||||  ||||||||||||    
T  21862233 tcattagctatctgggagagcttatggaaataagctgaaaacaacttatggacatgt 21862177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 24785211 - 24785279
Alignment:
Q  104 gtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||||||||||||   ||||||||| | ||||||||| ||||||  ||||| ||||||||||||    
T  24785211 gtgttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaacatgtcataag 24785279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 25459693 - 25459642
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatg 159  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||| |||||    
T  25459693 ttttcataagctatctcagagagcttgtggaaataagct-aaaacagcttatg 25459642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 36200124 - 36200172
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||| | ||||||||||||||||||  ||||||||||||||||||||    
T  36200124 agagctcatggaaataagctgaaaacaacttatggacatgtcataagtt 36200172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 40665436 - 40665500
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcat 169  Q
    |||||||||||| |||||  |||||||||   ||||||||||||||||| ||||| |||||||||    
T  40665436 tgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgtcat 40665500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 41724218 - 41724298
Alignment:
Q  105 tgttttcataagctatctcagagagctta-aggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||| |||||||   ||||||||| |  ||||||||||||||||  |||||||||||||||||||| |||| ||||    
T  41724218 tgttttcatcagctatccttgagagcttatataaaataagctgaaaacaacttatggacatgtcataagttgtttccataa 41724298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 42817287 - 42817192
Alignment:
Q  105 tgttttcataagctatctcagagagctta--aggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    ||||||| |||||||||| |||||| |||  || | ||||||||||||||  |||||||||||||||| | | |||| |||| ||||| |||||||    
T  42817287 tgttttcgtaagctatctaagagagtttatgagaatataagctgaaaacaacttatggacatgtcatatgctgtttccataagctctctcaaacag 42817192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 44295536 - 44295584
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacag 153  Q
    |||||||||||| ||| || ||||||||| |||||||||||||||||||    
T  44295536 tgttttcataagatatatcggagagcttatggaaataagctgaaaacag 44295584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 16790439 - 16790369
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    ||||||||||||||||  || |||||| | |||||| |||||||||| |||||||| ||||||||| |||||    
T  16790439 ttttcataagctatcttggatagcttatgaaaataaactgaaaacagcttatggac-tgtcataagctattt 16790369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 21367674 - 21367769
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggac-atgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||||||||  |||| |||| | ||||||||||||||||| || || || |||||||||| | |||  ||||  |||||||||||||    
T  21367674 tgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgttttcataagttctcccaaacagt 21367769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 31403154 - 31403221
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||| ||||||||||  |||||| | | || |||||||||||||||| ||||||||||| ||||||    
T  31403154 tgttttgataagctatcctagagagttcatggtaataagctgaaaacagcttatggacatgacataag 31403221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 37138299 - 37138346
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagt 154  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  37138299 ttttcataagctatcttagagagtttaggaaaataagctgaaaacagt 37138346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 37825149 - 37825196
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||| |||||||| |||||||||  ||||||||||||||||||    
T  37825149 gagagcttatggaaataacctgaaaacaacttatggacatgtcataag 37825196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 41452530 - 41452609
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    |||||||||||||||||   ||||  ||  ||||||||| ||||||||| |||| ||||| ||||||||| |||||||||    
T  41452530 tgttttcataagctatcctggagaagttgtggaaataaggtgaaaacagcttatagacatatcataagttgtttctataa 41452609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 53762425 - 53762326
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataagttcaaataa 236  Q
    ||||||| ||||||||| ||||| |||||||||||| | |||  | ||  |||||| |||||| ||||| ||||||||  ||| ||||||| ||||||||    
T  53762425 aaataagttgaaaacagcttatgaacatgtcataagctgttttcaaaatttctccctaacagtcttacaggcatttatgctagtagataagctcaaataa 53762326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 3044302 - 3044248
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    ||||||||| | ||||||| ||||||||| ||||| |||||||||||||| ||||    
T  3044302 gagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagttgtttc 3044248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 29771868 - 29771930
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    |||||| ||||||||| ||||||||  ||||||||||||| |||||| ||||| ||| |||||    
T  29771868 agcttatggaaataagttgaaaacaacttatggacatgtcctaagttgtttctttaagctctc 29771930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 30573977 - 30573911
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    ||||||||||||||||||  ||||||| | | | ||||||||||||||| ||||| ||||| |||||    
T  30573977 tgttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataa 30573911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 37155038 - 37155092
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    |||||||||  |||||||  |||||||||||| |||||||||||| |||||||||    
T  37155038 ggaaataagtagaaaacaacttatggacatgtaataagttatttccataaactct 37155092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 37200393 - 37200447
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    |||||||||  |||||||  |||||||||||| |||||||||||| |||||||||    
T  37200393 ggaaataagtagaaaacaacttatggacatgtaataagttatttccataaactct 37200447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 50600241 - 50600147
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| |||||| |  |||| |||| | ||||||||||||||||| |  |||||||||||| |||| ||| |||||  ||| |||||||||    
T  50600241 tgttttcatcagctatattggagaacttatgaaaataagctgaaaacagctcgtggacatgtcatgagttgtttttataagttcttccaaacagt 50600147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 1816590 - 1816663
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    ||||||||||||||||    |||||||||   |||||||||||||||||  |||| | ||||||||||||||||    
T  1816590 tgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgtcataagttattt 1816663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 9279389 - 9279308
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaac 186  Q
    ||||||||||| |||||    |||| ||||||||||||||||||||||| ||||  |||||| ||||| | |||| ||||||    
T  9279389 tgttttcataaactatcatgaagagtttaaggaaataagctgaaaacagcttatatacatgttataagctgtttccataaac 9279308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 25925769 - 25925818
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||| | ||||||| ||||||||| ||||| ||||||||||||||    
T  25925769 gagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagtt 25925818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 27290934 - 27290897
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  27290934 ggaaataagctgaaaacagcttatgggcatgtcataag 27290897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 28801292 - 28801361
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaa 194  Q
    ||||||||  |||||||||||||| | ||||| | |||||||||| || | |||| ||||||||||||||    
T  28801292 gagagcttgtggaaataagctgaatatagtttctagacatgtcatgagctgtttccataaactctcccaa 28801361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 172
Target Start/End: Complemental strand, 31615581 - 31615548
Alignment:
Q  139 ataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||||||||||| |||||||||||||||    
T  31615581 ataagctgaaaacagtttgtggacatgtcataag 31615548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 39971325 - 39971390
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcc 191  Q
    |||| |||| |||||||||||||||||   |||||||||  ||||||||||||  |||||||||||    
T  39971325 agagtttaatgaaataagctgaaaacatgatatggacattccataagttattttcataaactctcc 39971390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 45432981 - 45432936
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    |||||||| ||||||||||||||||||  ||||| |||||||||||    
T  45432981 agagcttatggaaataagctgaaaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 47132033 - 47132070
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  47132033 aaataagctgaaaacagtttatggatatgacataagtt 47132070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 54775166 - 54775219
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    ||||||| ||||| ||| ||||||||||  ||||||||||||| ||||||||||    
T  54775166 aaataagatgaaagcagcttatggacataacataagttatttccataaactctc 54775219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 1217863 - 1217767
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    |||||||||||||||||   |||| |||| | || |||| ||||||||  |||||||||||||||||| | ||||  ||| |||| ||||| |||||    
T  1217863 tgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataagctgtttccgtaagctcttccaaatagttt 1217767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 1360559 - 1360523
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    |||||||||||||||| || |||||||||||||||||    
T  1360559 ggaaataagctgaaaatagcttatggacatgtcataa 1360523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 33880612 - 33880560
Alignment:
Q  112 ataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacat 164  Q
    ||||||||| |||||||||||| | ||||||| | ||||||| ||||||||||    
T  33880612 ataagctatttcagagagcttaggcaaataagattaaaacagcttatggacat 33880560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 44284143 - 44284087
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatgga 161  Q
    |||||||||||||||||   |||||||||  ||||||||||||||| || |||||||    
T  44284143 tgttttcataagctatcctggagagcttatagaaataagctgaaaatagcttatgga 44284087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 46434651 - 46434615
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  46434651 ggaaataagctgaaaacagtttatgaacacgtcataa 46434615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 49174151 - 49174207
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatgga 161  Q
    |||||||||||| ||||| || ||||||| | ||||||||| |||||| ||||||||    
T  49174151 tgttttcataagttatctaagtgagcttacgaaaataagctcaaaacattttatgga 49174207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 50004690 - 50004738
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    |||||||||||||||||| ||| | |||||||||||||| |||| ||||    
T  50004690 gaaataagctgaaaacagcttaagaacatgtcataagttgtttccataa 50004738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 54180843 - 54180767
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttcta 181  Q
    ||||||||||||||||    |||||||||   ||||||||| ||||||  |||||||||||||||||| | ||||||    
T  54180843 tgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataagctgtttcta 54180767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 54837095 - 54837003
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||||||  || ||||||   |||||||| |||||||  ||||| |||||||||||| | |||  ||||| ||| |||||||||    
T  54837095 ttttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaacatgtcataagctgttttcataaattcttccaaacagt 54837003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 54965549 - 54965585
Alignment:
Q  165 gtcataagttatttctataaactctcccaaacagttt 201  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  54965549 gtcataagttatttctataaattctcccaaaaagttt 54965585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 7e-20; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 48157163 - 48157089
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||| |||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  48157163 gagatcttatggaaataagctgaaaacagcttatggacatggcataagttgtttctataagctctcccaaacagt 48157089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 45078287 - 45078364
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||||||||| | || | |||  ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  45078287 ttttcataagctatcacggataacttgtggaaataagttgaaaacagcttatggacatgtcataagttatttctataa 45078364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 12234933 - 12234873
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  12234933 agagagcttatggaaataagctgaaaacagcttatagacatgtcataagttgtttctataa 12234873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 42281577 - 42281486
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaac 196  Q
    ||||||||||||||||| | |||||||||  |||||||||||||||||  ||||  |||||||||||| | ||||||||| |||||| ||||    
T  42281577 tgttttcataagctatcactgagagcttatagaaataagctgaaaacaaattatttacatgtcataagctgtttctataagctctcctaaac 42281486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 197
Target Start/End: Complemental strand, 27481425 - 27481265
Alignment:
Q  35 ttatatataagttacttctttagcaaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaa 134  Q
    |||| |||||| || |||| || |||| |||||||| |||| ||||  ||||||| ||| ||| ||||| |  ||||||||||||||   || ||||||     
T  27481425 ttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttat--tttcataagctatcatggatagcttat 27481328  T
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||||| |  |||||||||||| ||||| || ||||||||| |||||| ||||| ||||||    
T  27481327 ggaaataaacccaaaacagtttatagacatatcgtaagttattgctataagctctcacaaaca 27481265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 21453301 - 21453395
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||||  |||||||| | | | ||||||||||||  ||||||||| |||||||||| |  |||||||| |||| |||||||||    
T  21453301 tgttttcataagctatcctagagagctaatgaagataagctgaaaatggtttatggagatgtcataagattattctataagctcttccaaacagt 21453395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 39334200 - 39334294
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||| ||||||||   | ||||||| ||||||||||||||  ||  ||||||||||||||||| || |||| ||||||||| |||||||||    
T  39334200 tgttttcaaaagctatcctggcgagcttatggaaataagctgaatgcaacttatggacatgtcataaattgtttccataaactctaccaaacagt 39334294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 44151588 - 44151477
Alignment:
Q  58 caaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagttta 157  Q
    ||||||||| || ||||| ||||  ||||||| ||| ||| |||||||  |||||||| ||||||   | |||||| ||||||||||||||||||  |||    
T  44151588 caaaagatagaataaagtaaaactgtttccatataagctataagttgt--tttcataaactatcttgaaaagcttatggaaataagctgaaaacatctta 44151491  T
Q  158 tggacatgtcataa 171  Q
    ||||||||||||||    
T  44151490 tggacatgtcataa 44151477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 12834992 - 12834931
Alignment:
Q  138 aataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||| |||| |||| ||||    
T  12834992 aataagctgaaaacagtttatggacatgtcataagctgtttccataatctctaccaatcagt 12834931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 33646023 - 33645939
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    ||||||||||||||||||  ||||||||| |||||||| || ||||||  |||| ||||||||||||||| |||| |||| |||||    
T  33646023 tgttttcataagctatctg-gagagcttatggaaataacctaaaaacaacttatagacatgtcataagttgtttccataagctctc 33645939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 44808197 - 44808238
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  44808197 aaataagctgaaaacaggttatggacatgtcataagttattt 44808238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 3501000 - 3500940
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||| |||| ||||| ||||    
T  3501000 ggaaataagctgaaaacagctgatgtacatgtcataagttatttccataagctctcacaaa 3500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 27121636 - 27121565
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    ||||||||| ||||| ||| ||||||||| |||| || |||||||||| |||||| |||||||||||||||||    
T  27121636 gagagcttatggaaacaagttgaaaacagcttattga-atgtcataagctatttccataaactctcccaaaca 27121565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 39539812 - 39539760
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    ||||||||||||||||| |||||||||||||||||||| ||||  ||||||||    
T  39539812 aaataagctgaaaacagcttatggacatgtcataagttgtttccgtaaactct 39539760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 18749880 - 18749801
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||||||||||| | || | |||| ||||||||||||||||| | ||||| ||||||| |||| | |||||||||    
T  18749880 tgttttcataagctatcacggaaaacttatggaaataagctgaaaactgcttatgaacatgtcgtaagctgtttctataa 18749801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 24363664 - 24363601
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtca 168  Q
    |||||||||||||||||   ||||| ||| ||||||||||||||||||  ||||||||||||||    
T  24363664 tgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 27626165 - 27626094
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||||| ||||||||| | |||||||||||||||||||||||||| | |||| |||| || || ||||||    
T  27626165 agagcttatggaaataagtttaaaacagtttatggacatgtcataagctgtttccataagctttctcaaaca 27626094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 39568356 - 39568305
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataaact 187  Q
    ||||||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  39568356 gaaataagccgaaaacaacttatggacatgtcataagttatttccataaact 39568305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 941556 - 941626
Alignment:
Q  114 aagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||||||||||||||  |||||||  | ||||| | |||||||||||||||||||| |||| ||||    
T  941556 aagctatctcagagagcttatagaaataaatttaaaactgcttatggacatgtcataagttgtttccataa 941626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 2767211 - 2767161
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaa 185  Q
    ||||||||| ||||||||||| |||||||||| ||||||| ||||||||||    
T  2767211 ggaaataagttgaaaacagttgatggacatgtaataagttgtttctataaa 2767161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 5628629 - 5628564
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    |||||||||||| |||| ||||||||||| | |||||||||| |||||| |||| ||||||||||||    
T  5628629 tgttttcataagatatcacagagagcttatgaaaataagctg-aaacagcttatagacatgtcataa 5628564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 22387939 - 22387865
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| ||||||||| | ||||||||||||  ||||| |||||||| |||  |||| ||||||||||||||    
T  22387939 gagagcttatggaaataagttaaaaacagtttataaacatgccataagttgttttcataagctctcccaaacagt 22387865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 29287257 - 29287307
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    |||||||||||||||||  |||||| ||||||||||||||||||| |||||    
T  29287257 agcttaaggaaataagccaaaaacaatttatggacatgtcataagctattt 29287307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 39360030 - 39360124
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||| ||||||||   | |||||||  |||||||||||||| ||  ||||||| |||||||||||| |||| |||||||||  ||||||||    
T  39360030 tgttttcaaaagctatcctggcgagcttattgaaataagctgaaagcaacttatggatatgtcataagttgtttccataaactctatcaaacagt 39360124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 40428568 - 40428630
Alignment:
Q  111 cataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagt 173  Q
    |||||||||||  | |||||||| |||||||||||||||||||||||| | | ||||||||||    
T  40428568 cataagctatcctaaagagcttatggaaataagctgaaaacagtttatcggcgtgtcataagt 40428630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 529382 - 529451
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||||||||||  ||||||||| | ||||| | ||||||||| ||||| || |||||||||||    
T  529382 tgttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcataagtt 529451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 36598388 - 36598327
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||||||||||||||| ||||| |||||||||||| | |||| |||| ||||| ||||||    
T  36598388 gaaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaaca 36598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 39551588 - 39551527
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    |||||| ||||||||||||| ||||  |||||||||||||||||||| |||| |||| ||||    
T  39551588 agcttatggaaataagctgacaacaccttatggacatgtcataagttgtttccataacctct 39551527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 21247965 - 21248017
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    ||||||||| ||||||  ||||| ||||||||||||||||||| |||||||||    
T  21247965 aaataagcttaaaacaacttatgaacatgtcataagttatttccataaactct 21248017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 27517898 - 27517850
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||| ||| ||||||||||||||||| | ||||||||||||||||||||    
T  27517898 agagtttatggaaataagctgaaaactgcttatggacatgtcataagtt 27517850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 29290359 - 29290419
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    |||| ||||| ||||||| | ||||||||| |||||||||||||||||||| |||| ||||    
T  29290359 agagtgcttacggaaatatgttgaaaacagcttatggacatgtcataagttgtttccataa 29290419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 46056073 - 46056009
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcat 169  Q
    ||||||||||||||||| |  |||||||| ||||||||||| ||||||  |||||||||| ||||    
T  46056073 tgttttcataagctatcccgtagagcttatggaaataagctaaaaacatattatggacatatcat 46056009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 10079396 - 10079310
Alignment:
Q  110 tcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||||| |||  |||||||||||||||||||| || | |||| ||||  ||||||||| || | ||||||||| ||||||||||||    
T  10079396 tcataagccatcctagagagcttaaggaaataagttg-agacagcttataaacatgtcatcagctgtttctataagctctcccaaaca 10079310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 19719047 - 19719082
Alignment:
Q  139 ataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||||||||||||| ||||||||||||||    
T  19719047 ataagctgaaaacagtttatgaacatgtcataagtt 19719082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 23434219 - 23434153
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||||||||||  |||||||||| | ||||| ||||||||||| |||  |||||||||||||||    
T  23434219 ttttcataagctatccaagagagcttacg-aaatatgctgaaaacagcttaaagacatgtcataagtt 23434153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 27496449 - 27496406
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcat 169  Q
    |||| ||| ||||||||||||||||||| |||||||||||||||    
T  27496449 agagtttatggaaataagctgaaaacagcttatggacatgtcat 27496406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 27503107 - 27503064
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcat 169  Q
    |||| ||| ||||||||||||||||||| |||||||||||||||    
T  27503107 agagtttatggaaataagctgaaaacagcttatggacatgtcat 27503064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 39345503 - 39345606
Alignment:
Q  130 cttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataagtt 229  Q
    |||| ||||||||||||||| ||  |||||||||||||||||  | |||| || |||||| ||||||||| | ||||| | ||||   || |||||||||    
T  39345503 cttatggaaataagctgaaagcaacttatggacatgtcataaactgtttccatgaactctaccaaacagtctcacaagtaattattccagtagataagtt 39345602  T
Q  230 caaa 233  Q
    ||||    
T  39345603 caaa 39345606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 248
Target Start/End: Complemental strand, 44615147 - 44615024
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagat 224  Q
    ||||| ||| ||||||||  ||||||||| || ||||||||||||||||| |||  |||| ||||||  ||||||||| ||||   ||||  ||| ||||    
T  44615147 gagagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagctctcctgaacagttttgcaagtggttatgctagtagat 44615048  T
Q  225 aagttcaaataagaaaatccaaat 248  Q
    ||| |||| ||||  |||||||||    
T  44615047 aagctcaattaaggcaatccaaat 44615024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 1710756 - 1710798
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgt 166  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||    
T  1710756 agagaggttatggaaataagctgaaaacagtttatggagatgt 1710798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 3468623 - 3468753
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaa 206  Q
    ||||||||| |||||  ||||| |||  ||||||||| || |||||  ||||||||||||||| |||| |||| |  |||||||| ||||||| | | ||    
T  3468623 ttttcataatctatcctagagaacttgtggaaataagttggaaacaacttatggacatgtcattagttgtttccaacaactctccgaaacagtctcaaaa 3468722  T
Q  207 gcatttataatagcagataagttcaaataag 237  Q
    |  |||||  ||| |||||||||| ||||||    
T  3468723 gtgtttattttagtagataagttcgaataag 3468753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 7244687 - 7244753
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    |||||||||||||||| |  ||||||||| | ||||||||||||||||  |||||  ||||||||||    
T  7244687 tgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataa 7244753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 12792735 - 12792697
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacat 164  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  12792735 agagcttacggaaataagctgaaaacagtttatagacat 12792697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 15075146 - 15075088
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatg 165  Q
    ||||||||| ||| || |||||||||| ||||||||||| ||||||| ||||| |||||    
T  15075146 ttttcataaactaccttagagagcttatggaaataagctaaaaacagcttatgtacatg 15075088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 30751566 - 30751620
Alignment:
Q  145 tgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||||||||  ||||  | ||||||||| ||||||||||||||    
T  30751566 tgaaaacagtttatggacatgctataaactgtttctataagctctcccaaacagt 30751620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 34035924 - 34035998
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggac-atgtcataagttattt 178  Q
    |||||||||||||||||| ||||| |||  | ||||||| ||||||||  ||||| || ||||||||||||||||    
T  34035924 tgttttcataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattt 34035998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 2012675 - 2012634
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaa 149  Q
    |||||||| |||||| |||||||||| |||||||||||||||    
T  2012675 tttcataaactatcttagagagcttatggaaataagctgaaa 2012634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 4001613 - 4001686
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||||||  | |||||||||||||| |  |||| | ||||||||||||| |||| ||||| |||||||||||    
T  4001613 agagagcttgtgaaaataagctgaaaaaaacttattggcatgtcataagttgtttccataaaatctcccaaaca 4001686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 9423657 - 9423576
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaac 186  Q
    |||||| ||||||||||   ||||||||   |||||||||||||||||  ||||| ||||||||||| || |||| ||||||    
T  9423657 tgttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacatgtcataaattgtttccataaac 9423576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 12110367 - 12110436
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||||||||||   ||| |||| | |||||| || |||||||||| || ||||||||||||||    
T  12110367 tgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacatgtcataagtt 12110436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 22283807 - 22283754
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttat 158  Q
    ||||||||||| | |||| ||||| |||| ||||||||||||||||||| ||||    
T  22283807 tgttttcataaaccatcttagagaacttatggaaataagctgaaaacagcttat 22283754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 28521053 - 28520996
Alignment:
Q  127 gagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||| |||||  |||||||||||| |||| ||||||||||||||| |||| ||||    
T  28521053 gagcttatggaaaatagctgaaaacagcttatagacatgtcataagttgtttccataa 28520996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 38010721 - 38010782
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgt 166  Q
    ||||||||||| |||||  ||||| |||| ||||||||||| ||||||| ||||| ||||||    
T  38010721 tgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgt 38010782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 46082063 - 46082112
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||| | ||||||||||||||||  |||||| |||||||||||||    
T  46082063 gagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagtt 46082112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 3610803 - 3610739
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcat 169  Q
    ||||||| ||| |||||  ||||||||||  |||||||||||||||  | |||||||||||||||    
T  3610803 tgttttcgtaaactatcctagagagcttatagaaataagctgaaaaaggcttatggacatgtcat 3610739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 11048067 - 11048103
Alignment:
Q  138 aataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  11048067 aataagctgaaaacagcttatgaacatgtcataagtt 11048103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 11721271 - 11721223
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    |||||||| ||||||||  |||| ||||||||||||| |||||||||||    
T  11721271 gaaataagatgaaaacaaattatcgacatgtcataagctatttctataa 11721223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 12792559 - 12792507
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatg 159  Q
    ||||||||||||||||   ||||||||  |||||||||||| |||||||||||    
T  12792559 ttttcataagctatcttgaagagcttattgaaataagctgataacagtttatg 12792507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 12792624 - 12792576
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtt 155  Q
    ||||||||||||||||   |||||||| | |||||||||||||||||||    
T  12792624 ttttcataagctatcttgaagagcttatgaaaataagctgaaaacagtt 12792576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 23214896 - 23215004
Alignment:
Q  139 ataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataagttcaaataaga 238  Q
    |||||||||| | || ||||||| |||||||||||| |||  ||||| |||| |||||||| | | |||  |||||  ||| ||||||| |||||||||     
T  23214896 ataagctgaatagagcttatggaaatgtcataagttgttttcataaattctctcaaacagtctcataagtgtttatgctagtagataaggtcaaataagt 23214995  T
Q  239 aaatccaaa 247  Q
     ||||||||    
T  23214996 caatccaaa 23215004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 46281171 - 46281119
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    |||||||||||||||| ||||| |||||| |||||||| ||||  ||||||||    
T  46281171 aaataagctgaaaacaatttatagacatggcataagttgtttccgtaaactct 46281119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 4e-18; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 28586819 - 28586728
Alignment:
Q  115 agctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaa 206  Q
    |||||||  ||||||||||  |||||||||||||||||| ||| ||| |||||||||| |||||| |||| |||||||||||||||| ||||    
T  28586819 agctatcctagagagcttatcgaaataagctgaaaacagcttacggatatgtcataagctatttccataagctctcccaaacagtttcacaa 28586728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 37611278 - 37611186
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    ||||||||||||||||||  ||||||||| |||||||| |||||||||| ||||| |||||||| ||||| |||  |||| ||||| ||||||    
T  37611278 tgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaaca 37611186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 37788008 - 37787916
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    ||||||||||||||||||  ||||||||| |||||||| |||||||||| ||||| |||||||| ||||| |||  |||| ||||| ||||||    
T  37788008 tgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaaca 37787916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 41052875 - 41052967
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    ||||||||||| |||| |  ||||||||| ||||||||| | |||| |||||||| |||||||||| ||| ||||||||| ||||||||||||    
T  41052875 tgttttcataacctattttggagagcttatggaaataagttaaaaatagtttatgaacatgtcataggttgtttctataagctctcccaaaca 41052967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 168
Target Start/End: Complemental strand, 42181200 - 42181092
Alignment:
Q  58 caaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagttta 157  Q
    |||||||||||||||||| ||| | ||| ||| ||| ||| |||||||  || || ||| ||||  |||||||| |||||||||||||||||| ||||||    
T  42181200 caaaagataaaacaaagtcaaatggttttcatataagctataagttgt--ttgcacaagttatcctagagagctcaaggaaataagctgaaaatagttta 42181103  T
Q  158 tggacatgtca 168  Q
    |||||||||||    
T  42181102 tggacatgtca 42181092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 38047892 - 38047810
Alignment:
Q  155 ttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataagttcaaataag 237  Q
    |||||||||||||||||||| |||| |||| ||||||||||||||   ||||| | ||||||||| |||||||||||| ||||    
T  38047892 ttatggacatgtcataagttgtttccataagctctcccaaacagtcacacaagtacttataatagtagataagttcaagtaag 38047810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 40205137 - 40205055
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaact 187  Q
    |||||||||||||||||   |||||||||  |||||||||||||||||| |||||||||||| ||||| | ||| ||||||||    
T  40205137 tgttttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacatgttataagctgtttatataaact 40205055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 40534206 - 40534300
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||||||| ||||||||||| |||| |||| |||||||   ||||| |||||||||||| || ||| |||| |||||| |||||||    
T  40534206 tgttttcataagctatcccagagagcttatggaagtaagatgaaaactaattatgaacatgtcataagctacttccataagctctcctaaacagt 40534300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 196
Target Start/End: Original strand, 32172660 - 32172751
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaac 196  Q
    |||||||||||||||||    ||| || | ||||||||||||||||  | |||||||||||||||||||| |||| |||| |||||||||||    
T  32172660 tgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacatgtcataagttgtttccataagctctcccaaac 32172751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 10272494 - 10272404
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    ||||||||||||| ||||  ||||| ||| | ||||||||||||||||  |||  ||||||||||||||| ||||||||| | ||||||||    
T  10272494 tgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacagacatgtcataagttgtttctataagcactcccaaa 10272404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 11700409 - 11700355
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcc 191  Q
    |||||| |||||||||| |||||||||||||||||||| |||| |||||||||||    
T  11700409 aaataatctgaaaacagcttatggacatgtcataagttgtttccataaactctcc 11700355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 12242773 - 12242683
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    ||||||||||||||||||  ||||||||| |||| |||||||||||||  | |||  ||||||||||||| |||| |||| ||||| ||||    
T  12242773 tgttttcataagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcataagttttttccataagctctctcaaa 12242683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 17368683 - 17368752
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||||||||||  ||||| ||| ||||||||||||||||| |  |||| ||||||||||||||    
T  17368683 tgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagtt 17368752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 18704099 - 18704003
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagtttt 202  Q
    ||||||||||||||||  || ||| |||| ||||||||||||||||||  |||| ||||||| ||||||| |||| |||| |||||  ||||||||||    
T  18704099 tgttttcataagctattacaaagatcttatggaaataagctgaaaacaacttatagacatgttataagttgtttc-ataagctctcttaaacagtttt 18704003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 31208500 - 31208573
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||| | ||||||||| ||||||||||| ||||||  |||||||| ||| ||| ||||||||||||||||    
T  31208500 agagcttatgaaaataagctaaaaacagtttacggacattacataagttgtttttatgaactctcccaaacagt 31208573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 36638754 - 36638819
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    |||||||||||| ||||  |||||||||| |||||||||||||||| || ||||| ||||||||||    
T  36638754 tgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaacatgtcata 36638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 38104917 - 38104873
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaaaca 152  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||    
T  38104917 tttcataagctatcttagagagcttatggaaataagctgaaaaca 38104873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 207
Target Start/End: Complemental strand, 16380634 - 16380532
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctg-aaaacagtttatggacatgtcataagttatttctataaactctcccaaacagtttta 203  Q
    ||||||||||| ||||  |||||| |||| |||||||||||| ||||||| ||||||||||||| |||| | |||| |||||||||  |||| ||||| |    
T  16380634 tgttttcataa-ctattccagagaacttatggaaataagctgcaaaacagcttatggacatgtcgtaagctgtttccataaactcttgcaaatagtttca 16380536  T
Q  204 caag 207  Q
    ||||    
T  16380535 caag 16380532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 4619718 - 4619808
Alignment:
Q  109 ttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||   |||| |||| ||||||||| ||||| ||| ||||| ||||||||| |||| |||  |||| ||||||||||||||    
T  4619718 ttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcataagctctcccaaacagt 4619808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 19138760 - 19138714
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||||    
T  19138760 gagagcttatggaaataagctgaaaacaatttatgtacatgtcataa 19138714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 35095849 - 35095755
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| ||||||||   | |||||| ||||||||| ||||||| |  |||| |||||||||||| |||||| |||| |||| |||||||||    
T  35095849 tgttttcatgagctatcttgtaaagcttatggaaataagttgaaaacggcatatgtacatgtcataagatatttccataagctcttccaaacagt 35095755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 35963271 - 35963341
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    |||||| ||||||||||||||||||  |||||||||||||||| | |||||| ||||  ||||| ||||||    
T  35963271 agcttatggaaataagctgaaaacaacttatggacatgtcatacgctatttccataagttctcctaaacag 35963341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 4855705 - 4855774
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||| ||||| || ||||||||  ||||||||| |||||||| || || ||||||||||||||    
T  4855705 tgttttcataaactatcccaaagagcttacagaaataagccgaaaacagcttctgaacatgtcataagtt 4855774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 17258946 - 17258873
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    ||||||||||| |||||    |||||||| | ||||||||||||||||| ||||| |||||||||||| |||||    
T  17258946 tgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctattt 17258873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 985650 - 985706
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcc 191  Q
    ||||||||||||||||| | || |||||||||||||||||||||  |||| ||||||    
T  985650 ggaaataagctgaaaaccgcttgtggacatgtcataagttatttgcataatctctcc 985706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 41957514 - 41957418
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    |||||||||||||||||   |||| |||| | ||||||| ||||||||  |||||||||||||||||| | ||||  ||| |||| ||||| |||||    
T  41957514 tgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgtttccgtaagctcttccaaatagttt 41957418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 11667168 - 11667235
Alignment:
Q  127 gagcttaaggaaataagctgaaaa-cagtttatggacatgtcataagttatttctataaactctccca 193  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||  | |||||| || ||||||||    
T  11667168 gagcttatagaaataagctgaaaaacagtttatggacatgtcataatctgtttctacaagctctccca 11667235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 14331394 - 14331441
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||| | ||||||||||||| ||| ||||||||||||||||||    
T  14331394 gagagcttatgaaaataagctgaaatcagcttatggacatgtcataag 14331441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 15074789 - 15074750
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtc 167  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  15074789 agcttatggaaataagctgaaaacagcttatggacatgtc 15074750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 18543259 - 18543193
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||||||||||   ||||||||| | ||||||||||||||||  | ||||||||||||||||    
T  18543259 tgttttcataagctatcctggagagcttatg-aaataagctgaaaacaactcatggacatgtcataag 18543193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 21768260 - 21768193
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||||| |||||   |||||||| | ||||||| |||||||||  |||||||||||||||||    
T  21768260 tgttttcataagttatcttgaagagcttacgaaaataagttgaaaacagcgtatggacatgtcataag 21768193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 36542339 - 36542260
Alignment:
Q  111 cataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    |||||||||||  |||||||||  ||||||||| | ||||||| || ||||||||||||||| | |||| ||||| ||||    
T  36542339 cataagctatcctagagagcttgtggaaataagttaaaaacagcttctggacatgtcataagatgtttccataaaatctc 36542260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 38728434 - 38728501
Alignment:
Q  130 cttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||| ||||||||||||||||||| ||| |  ||||||||||| |||||  |||| ||||||||||||    
T  38728434 cttatggaaataagctgaaaacagcttaggagcatgtcataagctattttcataagctctcccaaaca 38728501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 4014487 - 4014433
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatg 159  Q
    ||||||||||||||||||  |||| |||| | ||||||||||||||||| |||||    
T  4014487 tgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatg 4014433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 6109510 - 6109576
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcc 191  Q
    ||||||||  ||||||||||||||||||  |||||||||| |||||| || |||| |||| ||||||    
T  6109510 gagagcttttggaaataagctgaaaacaacttatggacatatcataatttttttccataagctctcc 6109576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 8820807 - 8820909
Alignment:
Q  145 tgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataagttcaaataagaaaatcc 244  Q
    |||| |||| ||||||||   ||||||||||||||  ||| |||||| ||||||||| || |||  ||||  ||| ||||||| ||||||||| ||||||    
T  8820807 tgaatacagcttatggactaatcataagttatttccctaagctctccaaaacagtttcaccagctcttatgctagtagataagatcaaataagtaaatcc 8820906  T
Q  245 aaa 247  Q
    |||    
T  8820907 aaa 8820909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 9202881 - 9202835
Alignment:
Q  33 gcttatatataagttacttctttagcaaaagataaaacaaagttaaa 79  Q
    ||||||||||||| || |||| ||||||||||||||| |||||||||    
T  9202881 gcttatatataagctatttctgtagcaaaagataaaataaagttaaa 9202835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 11457106 - 11457199
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||| ||| |||||  |||||||||  |||||||  ||||| ||| |||||||||||||||||||| |||| |||| |||| | |||||||    
T  11457106 tgttttcaaaagttatcttggagagcttatagaaataatatgaaa-cagcttatggacatgtcataagttgtttccataagctcttcaaaacagt 11457199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 12521556 - 12521602
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||| ||||||||||||||||||| ||||| |||| |||||||    
T  12521556 agagcttatggaaataagctgaaaacagcttatgaacatatcataag 12521602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 13264136 - 13264074
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||||||| ||||| | ||| |||||| | |||| ||||||||| |||||||||    
T  13264136 aaataagctgaaaacagcttatgaatatggcataagctgtttccataaactcttccaaacagt 13264074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 37526242 - 37526168
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| ||||||||||||||||||| ||||  |||||||||| ||| | |  |||| ||||| ||||||||    
T  37526242 gagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaacagt 37526168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 37690679 - 37690605
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| ||||||||||||||||||| ||||  |||||||||| ||| | |  |||| ||||| ||||||||    
T  37690679 gagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaacagt 37690605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 8651415 - 8651355
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgt 166  Q
    |||||||||||||||| || | ||||||| ||||||| ||||||||||  ||||||||||||    
T  8651415 tgttttcataagctat-tctgggagcttatggaaatatgctgaaaacaacttatggacatgt 8651355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 8985670 - 8985719
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagttt 156  Q
    |||||||||||||||  | |||||||| ||||| ||||||||||||||||    
T  8985670 ttttcataagctatcctatagagcttatggaaagaagctgaaaacagttt 8985719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 10391348 - 10391441
Alignment:
Q  105 tgttttcataagctatctcagagagctt-aaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||| ||||||||||  |||||| || ||||||||||| ||||||||  | || ||||||||||||  | ||| |||||||||| |||||||    
T  10391348 tgtttttataagctatcctagagagttttaaggaaataagttgaaaacaactaatagacatgtcataaagtgtttttataaactcttccaaaca 10391441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 32194134 - 32194073
Alignment:
Q  113 taagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||  |||||||||   ||||||||||||||||  ||||||| ||||||||||||    
T  32194134 taagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 32194073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 34975371 - 34975436
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    ||||||| |||||||||   ||||||| | |||||||||||||||||  |||||||| ||||||||    
T  34975371 tgttttcgtaagctatcctggagagctaatggaaataagctgaaaacgatttatggatatgtcata 34975436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 35960377 - 35960510
Alignment:
Q  59 aaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttat 158  Q
    ||||||||||| ||||| ||||  |||| || ||||||| ||||||   ||||||||||||||   || ||| ||| |||||||||| ||||||  ||||    
T  35960377 aaaagataaaataaagtcaaactatttc-atataaactataagttga--tttcataagctatcctggaaagcgtaaagaaataagctaaaaacatcttat 35960473  T
Q  159 ggacatgtcataagttatttctataaactctcccaaa 195  Q
    ||||||||| ||||||  ||| |||| ||||| ||||    
T  35960474 ggacatgtcgtaagttgcttccataagctctctcaaa 35960510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 36774770 - 36774677
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    |||||| ||||||||||   ||||||||| ||||||||||||||| ||  ||  ||||||||||||||   |||| |||| |||| ||||||||    
T  36774770 tgtttttataagctatcctggagagcttatggaaataagctgaaaccatctttaggacatgtcataagccgtttccataagctcttccaaacag 36774677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 37112394 - 37112345
Alignment:
Q  30 agcgcttatatataagttacttctttagcaaaagataaaacaaagttaaa 79  Q
    ||||||||| |||||| || ||||  ||||||||||||||||||||||||    
T  37112394 agcgcttatgtataagctatttctacagcaaaagataaaacaaagttaaa 37112345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 7550568 - 7550521
Alignment:
Q  108 tttcataagctatctcagagagcttaagg--aaataagctgaaaacag 153  Q
    |||||||||||||||||||||||||| ||  | |||||||||||||||    
T  7550568 tttcataagctatctcagagagcttacggatatataagctgaaaacag 7550521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 16944988 - 16944936
Alignment:
Q  155 ttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    |||||||||| |||||||||||||| || | ||||| |||||||||| |||||    
T  16944988 ttatggacatatcataagttatttccatgacctctctcaaacagtttcacaag 16944936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 31723812 - 31723872
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatg 165  Q
    ||||||||||| ||||||  |||| |||| ||||| ||||| ||||||| |||||||||||    
T  31723812 tgttttcataaactatcttggagaccttacggaaaaaagcttaaaacagcttatggacatg 31723872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 34690880 - 34690972
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||| |||||||| ||||  ||||||||| |||||||||  || ||||  |||||||||||||| || || ||| ||||| |||||| |||||    
T  34690880 tgttctcataagccatcttggagagcttatggaaataagtcgataacaacttatggacatgtcacaatttgtttttataagctctcctaaaca 34690972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 2455819 - 2455901
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    ||||||||||||||||  ||||||||| ||||||||| |||||| ||||||||| ||||||||||||| |||| |||| ||||    
T  2455819 ttttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgtttccataagctct 2455901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 4420652 - 4420734
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    ||||| ||||||||||  ||||||||| ||||||||||||||||||| ||||| ||||||||||| || ||||||||| ||||    
T  4420652 ttttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgtttctataagctct 4420734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 2027836 - 2027767
Alignment:
Q  130 cttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||| ||  |||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  2027836 cttaaggaaataagctaaaggcagtttattgacatgtcataagttgtttctataagctctcccaaacagt 2027767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 109 - 206
Target Start/End: Original strand, 34939755 - 34939852
Alignment:
Q  109 ttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaa 206  Q
    |||||||||||||   ||||| ||| |||||||||||||||||| ||||||||||||||||||| | ||||  ||| |||||| ||||||||| ||||    
T  34939755 ttcataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctccaaaacagtttcacaa 34939852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 281907 - 281817
Alignment:
Q  109 ttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||  |||||||| | ||||||||||||||||||  |||| |||||||||||||||  ||| || | ||||||||||||||    
T  281907 ttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataagttgcttccattagctctcccaaacagt 281817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 58 - 199
Target Start/End: Original strand, 1402958 - 1403097
Alignment:
Q  58 caaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagttta 157  Q
    |||||||||||| ||||||||||  ||| ||| ||| ||| || ||||  ||||||||||||||   |||| ||||  ||||| ||||||| | ||||||    
T  1402958 caaaagataaaataaagttaaactattttcatataagctataaattgt--tttcataagctatcatggagatcttatagaaattagctgaatatagttta 1403055  T
Q  158 tggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    | || |||||||||||| |||| ||||||||||||| |||||    
T  1403056 tagatatgtcataagttgtttcgataaactctcccacacagt 1403097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 6647394 - 6647468
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    |||||||||||||||||| |||||||||| | ||||||| ||||||||  ||||| |||||||||||| ||||||    
T  6647394 tgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcataagctatttc 6647468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 9668048 - 9667974
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    ||||||||||| || | || ||||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||    
T  9668048 tgttttcataaactgtttcggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttc 9667974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 2034488 - 2034424
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||| | |||| ||||||||||    
T  2034488 agagcttaatgaaataagctgaaaacagcttatggaaatgtcataagctgtttccataaactctc 2034424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 9027606 - 9027678
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    |||||||| | ||||||||||||||||  ||||||||||||||||||||||||| |||| ||||  |||||||    
T  9027606 agagcttatgaaaataagctgaaaacaacttatggacatgtcataagttatttccataagctctttcaaacag 9027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 184
Target Start/End: Original strand, 2117365 - 2117489
Alignment:
Q  58 caaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagttta 157  Q
    |||| ||||||||||||| ||||  ||| ||| ||| ||| |||||||  ||||||||| ||||  ||||||||||  |||||||||| ||||||| |||    
T  2117365 caaaggataaaacaaagtcaaactattttcatataatctataagttgt--tttcataagttatcctagagagcttattgaaataagctaaaaacagctta 2117462  T
Q  158 tggacatgtcataagttatttctataa 184  Q
    | |||||| ||||| || |||||||||    
T  2117463 tagacatgccataaattgtttctataa 2117489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 3168324 - 3168257
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||| |||||||||   |||||||||||||||||||||||||||||   ||||||||||||||||    
T  3168324 tgttttcttaagctatcctggagagcttaaggaaataagctgaaaacagccgatggacatgtcataag 3168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 8420240 - 8420166
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| ||||||||| |||||| || || ||||||||||||||| ||||||||||| ||||| | ||||||    
T  8420240 gagagcttatggaaataagttgaaaatagcttgtggacatgtcataagctatttctataagctctcactaacagt 8420166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 3155138 - 3155251
Alignment:
Q  58 caaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagttta 157  Q
    |||||||||||||||||| ||||  ||||||| ||| ||| ||| | |  ||||||||| ||||   ||||||| | ||||||||||||||||||| |||    
T  3155138 caaaagataaaacaaagtcaaactgtttccatataacctataagctat--tttcataagatatcctggagagct-atggaaataagctgaaaacagctta 3155234  T
Q  158 tggacatgtcataagtt 174  Q
    | |||||||||||||||    
T  3155235 tagacatgtcataagtt 3155251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 24974060 - 24973947
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataagttcaaat 234  Q
    |||||||||||||||  |  |||| ||||||| |||||||||| |||||| |||| ||||||| | |||||||   ||||   |||||||||||||||||    
T  24974060 ggaaataagctgaaagaaacttatcgacatgttataagttattcctataagctctaccaaacaatcttacaagtgcttatgtcagcagataagttcaaat 24973961  T
Q  235 aagaaaatccaaat 248  Q
    |||  |||||||||    
T  24973960 aagctaatccaaat 24973947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 34939541 - 34939622
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    |||| ||| ||||||||||||||||||  ||| |||| ||||||||||| |||| |||| ||||| |||||| |||||||||    
T  34939541 agaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgtttccataagctctctcaaacaattttacaag 34939622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 2112164 - 2112284
Alignment:
Q  59 aaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttat 158  Q
    ||||||||||| |||||||||   |||| || ||||||| |||||||  |||||||| |||||| |||| |||||  ||||||| | |||||||  ||||    
T  2112164 aaaagataaaataaagttaaattgtttc-atataaactataagttgt--tttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttat 2112260  T
Q  159 ggacatgtcataagttatttctat 182  Q
    | |||||||||||||| |||||||    
T  2112261 gaacatgtcataagttgtttctat 2112284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 27894052 - 27894120
Alignment:
Q  104 gtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||||||| |||||   | |||||| | |||||||||||||||||||||||||||| |||||||    
T  27894052 gtgttttcataagatatcttgaaaagcttatgaaaataagctgaaaacagtttatggacatatcataag 27894120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 7785787 - 7785724
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactc 188  Q
    ||||||||| ||||||||||||||||||  |||| ||||||||||||| | ||||| |||||||    
T  7785787 gagagcttatggaaataagctgaaaacaacttatagacatgtcataagctgtttctgtaaactc 7785724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 9093619 - 9093528
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggac-atgtcataagttatttctataaactctcccaaa 195  Q
    |||||||||||||| ||| ||||| |||||| ||||||||||||||||| ||||  || |||||||||| |||||  |||| ||||| ||||    
T  9093619 tgttttcataagctgtcttagagaacttaagaaaataagctgaaaacaggttattaacaatgtcataagctattttcataagctctcacaaa 9093528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 19275699 - 19275620
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    |||||||||||||||||    |||||||| |||||||| | |||| ||| || |||||||||||||| ||||||||||||    
T  19275699 tgttttcataagctatcatgaagagcttatggaaataaaccgaaatcagcttgtggacatgtcataaattatttctataa 19275620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 30004921 - 30004964
Alignment:
Q  129 gcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  30004921 gcttatggaaataagctgaaaacagtttatggacatttcataag 30004964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 2205653 - 2205591
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtc 167  Q
    ||||||||||||||||||  ||||||||| |||||||||||||| | |||||||  |||||||    
T  2205653 tgttttcataagctatcttggagagcttatggaaataagctgaatatagtttataaacatgtc 2205591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 2460194 - 2460120
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| ||||||||| ||||||||  |||  ||||||||||||||| |||| |||| ||||| ||||||||    
T  2460194 gagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagt 2460120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 3775157 - 3775107
Alignment:
Q  139 ataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||| ||||    
T  3775157 ataagctgaaaacagtttatgcacatgtcataagctgtttctataagctct 3775107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 10616603 - 10616509
Alignment:
Q  106 gttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagtt 200  Q
    ||||| ||||||||| |  |||||||||   |||||||||||| |||  ||| |||||||||||||||| |||| |||| |||||||||| ||||    
T  10616603 gttttaataagctattttggagagcttataaaaataagctgaacacaacttacggacatgtcataagttgtttccataagctctcccaaatagtt 10616509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 32171494 - 32171568
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| ||||||||||||||||||||| |||||  | ||||||||| ||||  ||| ||||||||| ||||    
T  32171494 gagagcttatggaaataagctgaaaacagttcatggaggtatcataagttgtttccttaagctctcccaaccagt 32171568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 33385564 - 33385665
Alignment:
Q  135 ggaaataagctgaaaacag--tttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataagttcaa 232  Q
    ||||| ||||||||||||   |||||||||||||||| || | |||| ||||||||| ||||||||||| |||||   |||||  || ||||||||||||    
T  33385564 ggaaaaaagctgaaaacaacttttatggacatgtcatgagctgtttccataaactcttccaaacagtttcacaagtgcttatatcagtagataagttcaa 33385663  T
Q  233 at 234  Q
    ||    
T  33385664 at 33385665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 738712 - 738659
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    |||||||||| ||||||||||||||||| |||||||||| |||  |||||||||    
T  738712 gaaataagctaaaaacagtttatggacacgtcataagttgttttcataaactct 738659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 4324516 - 4324416
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    |||||||||||||||||   || | |||| | ||||||||| ||| ||||||| |||||||||||||||| ||| |||||  |||| |||||||| ||||    
T  4324516 tgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcataagttgttt-tataagttctctcaaacagtgttac 4324418  T
Q  205 aa 206  Q
    ||    
T  4324417 aa 4324416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 7931789 - 7931720
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||| ||||||||  | |||||||| ||||||||||||||||||  ||| | ||||||||||||||    
T  7931789 tgttttcaaaagctatcctacagagcttacggaaataagctgaaaacaacttaagaacatgtcataagtt 7931720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 10031739 - 10031808
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||| ||||||| |||  ||||||||||||||||||| ||||||||  ||||||| ||||| ||||||    
T  10031739 tgtttttataagctgtcttggagagcttaaggaaataagatgaaaacaacttatggatatgtcgtaagtt 10031808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 27909681 - 27909636
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||    
T  27909681 gagagcttatggaaataagctgaaaacaacttatggacatgtcata 27909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 31686426 - 31686357
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||||||||||||   ||||||||| ||| ||||||||||||||| ||||  || |||||||||||    
T  31686426 tgttttcataagctatcctggagagcttacggacataagctgaaaacagattataaacttgtcataagtt 31686357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 283133 - 283169
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||||||||| |||||||||||||||||||||    
T  283133 gaaataagctgaaaatagtttatggacatgtcataag 283169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 725697 - 725649
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||| |||||||||||||||| ||| || ||||||||||||||||    
T  725697 agagcttatggaaataagctgaaaatagtctacggacatgtcataagtt 725649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 3528811 - 3528879
Alignment:
Q  106 gttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||| | ||||||  ||||||||| | ||||||| ||||||||  ||||||||||||||||||||    
T  3528811 gttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataagtt 3528879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 6536975 - 6537023
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||| ||||||||||||||||||  ||||| ||||||||||||||    
T  6536975 agagcttatggaaataagctgaaaacaacttatgaacatgtcataagtt 6537023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 24670446 - 24670506
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    |||||||||| | ||||||||||| |||||  ||| ||||||||||||||| |||||||||    
T  24670446 agagagcttatgaaaataagctgataacagcatattgacatgtcataagttgtttctataa 24670506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 31583686 - 31583750
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcat 169  Q
    ||||||||||||||||| |  | |||||| ||||||||| ||||||||  |||||||||||||||    
T  31583686 tgttttcataagctatcccgaaaagcttatggaaataagttgaaaacaacttatggacatgtcat 31583750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 32917254 - 32917298
Alignment:
Q  155 ttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||||||| |||| |||| ||||||||||||||    
T  32917254 ttatggacatgtcataagttgtttccataagctctcccaaacagt 32917298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 32976023 - 32976079
Alignment:
Q  143 gctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||| ||||||| |||||||||| | ||||||||| |||| |||||||||    
T  32976023 gctgaaaacagcttatggaaatgtcataagctgtttctataagctcttccaaacagt 32976079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 1669830 - 1669759
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    ||||| |||||||||||| |||| ||||||||||||||| |||  |||| |||||||||  ||| |||||||    
T  1669830 gaaatgagctgaaaacagcttatagacatgtcataagttgttttcataagctctcccaattagtcttacaag 1669759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 24631947 - 24631873
Alignment:
Q  135 ggaaataagctgaaaacag--tttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    ||||||||||| |||||||  ||||||||||| |||| |||| |||| ||||||||| ||||| ||||| |||||    
T  24631947 ggaaataagctaaaaacagcttttatggacatatcatgagttgtttccataaactcttccaaatagtttcacaag 24631873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 27595611 - 27595536
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||| ||| |||||| |  |||||| || ||||| |||||||||||||| |||| ||||| |||||||||||||    
T  27595611 agagagtttacggaaattacttgaaaatagcttatgaacatgtcataagttgtttccataaattctcccaaacagt 27595536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 32578028 - 32577957
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    ||||| || ||||||||||||||||||| | | |||||||||||||||| |||  |||| ||||| ||||||    
T  32578028 agagcatatggaaataagctgaaaacagctcaaggacatgtcataagttgttttcataagctctctcaaaca 32577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 821838 - 821896
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    ||||||||||||||||| ||||| |||||||||||  |||| | |||| ||||||||||    
T  821838 aaataagctgaaaacagcttatgaacatgtcataacctattcccataagctctcccaaa 821896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 28467861 - 28467903
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    ||||||||||  |||||| ||||||||||||||||||||||||    
T  28467861 gaaataagctagaaacagcttatggacatgtcataagttattt 28467903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 33067165 - 33067267
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    ||||||||||||||||||  ||||||||   ||||||| ||||||||  ||||||||||| || |||  | || | |||| ||||||||| |||| ||||    
T  33067165 tgttttcataagctatcttggagagcttgtagaaataaactgaaaacgatttatggacatttcctaaactgttgccataagctctcccaatcagtcttac 33067264  T
Q  205 aag 207  Q
    |||    
T  33067265 aag 33067267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 34735872 - 34735830
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    ||||||||||  |||||| ||||||||||||||||||||||||    
T  34735872 gaaataagctagaaacagcttatggacatgtcataagttattt 34735830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 2027437 - 2027384
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    ||||||||||||||||| ||||||| |||||||||| | |||  ||||||||||    
T  2027437 aaataagctgaaaacagcttatggaaatgtcataagctgttttcataaactctc 2027384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 4006721 - 4006790
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||||||||| | ||||| ||| | |||||||||||||| |  |||||||||| || ||||||    
T  4006721 tgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggacatatcgtaagtt 4006790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 5329012 - 5329065
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    ||||||| ||||| ||| ||||||||||  ||||||||||||| ||||||||||    
T  5329012 aaataagatgaaagcagcttatggacataacataagttatttccataaactctc 5329065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 9559677 - 9559628
Alignment:
Q  30 agcgcttatatataagttacttctttagcaaaagataaaacaaagttaaa 79  Q
    ||||||||| ||||||||| |||| ||||||||||||||| ||| |||||    
T  9559677 agcgcttatgtataagttatttctatagcaaaagataaaataaatttaaa 9559628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 9732518 - 9732551
Alignment:
Q  140 taagctgaaaacagtttatggacatgtcataagt 173  Q
    ||||||||||||||||||||||||||| ||||||    
T  9732518 taagctgaaaacagtttatggacatgttataagt 9732551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 20368243 - 20368142
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    |||||||||||||| |||  |||| |||| | ||||||| |||||  || ||||| |||||||||||||| |||  ||||  ||||||||| ||| ||||    
T  20368243 tgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttcataagttctcccaaatagtcttac 20368144  T
Q  205 aa 206  Q
    ||    
T  20368143 aa 20368142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 25100050 - 25100119
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||||||||||||| | ||||||||  |||||||| |||||| ||   ||| ||||||||||||||    
T  25100050 tgttttcataagctatcttaaagagcttatagaaataagttgaaaatagcaaatgaacatgtcataagtt 25100119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 34403862 - 34403931
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||||||||| |   | |||||||| ||||||||| ||||||||  ||||| ||||||||||||||    
T  34403862 tgttttcataagctgtactaaagagcttatggaaataaggtgaaaacaccttatgaacatgtcataagtt 34403931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 3775033 - 3774989
Alignment:
Q  140 taagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    |||||||||||||||||||| |||||||| ||| | |||||||||    
T  3775033 taagctgaaaacagtttatgtacatgtcacaagctgtttctataa 3774989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 20377983 - 20377887
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    ||||||||||| | |||  | |||||||  |||||||||| |||||||  |||| ||||||||||||||| |||  |||| |||||| ||| |||||    
T  20377983 tgttttcataatccatcctatagagctttgggaaataagccgaaaacaacttatagacatgtcataagttgttttcataagctctcctaaatagttt 20377887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 24329995 - 24329947
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||| ||||||||||| |||||| | ||||||| |||||||||    
T  24329995 agagagcttatggaaataagcttaaaacaatgtatggacttgtcataag 24329947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 27857415 - 27857467
Alignment:
Q  155 ttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    ||||||| |||||||||||| |||  |||| |||||||||||||||| |||||    
T  27857415 ttatggagatgtcataagttgttttcataagctctcccaaacagtttcacaag 27857467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 31807909 - 31807841
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagt 173  Q
    |||||||||||||||||   | ||||||  || ||||||||||||| |||| |||| ||||||||||||    
T  31807909 tgttttcataagctatcctggtgagcttgtggcaataagctgaaaatagttaatggccatgtcataagt 31807841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 32386606 - 32386542
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    ||||||||| | ||||||||||||||||  || ||||||||| ||||| |||||| |||| ||||    
T  32386606 gagagcttatgaaaataagctgaaaacaagttgtggacatgttataagatatttccataagctct 32386542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 23373375 - 23373284
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||||||||||||||    ||||||||  |||||||||||||||||| |  ||||||||||||||||| ||||||||| ||||||||||||    
T  23373375 tgttttcataagctatcctgaagagcttacagaaataagctgaaaacagatg-tggacatgtcataagttgtttctataagctctcccaaaca 23373284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 47020515 - 47020579
Alignment:
Q  106 gttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcata 170  Q
    ||||||||||||||||| |||||||||| ||||||||| || |||||| ||||||||||||||||    
T  47020515 gttttcataagctatcttagagagcttacggaaataagttgtaaacaggttatggacatgtcata 47020579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 52190138 - 52190232
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    |||||||||||||||   ||||||||| | ||||||||||||||| | || ||||| ||||||||| ||||||||||| ||| | ||||||||||    
T  52190138 ttttcataagctatcatggagagcttacgaaaataagctgaaaacggcttgtggacttgtcataagatatttctataagctcactcaaacagttt 52190232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 3597314 - 3597250
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||||| || |||||| ||||||||||||||||| ||| |||||| |||||||||    
T  3597314 ggaaataagctgaaaatagcttatggccatgtcataagttatttttatcaactcttccaaacagt 3597250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 10199469 - 10199398
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    |||||||||||||| | |||||||||| | ||||||||||||||||  ||||| |||||||||||| |||||    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattt 10199398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 33722462 - 33722379
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    |||||||||| ||||  | |||| ||| ||||||||||||||||||  |||| || |||||||| |||||||||||||||||||    
T  33722462 ttttcataagttatcctacagaggttatggaaataagctgaaaacaacttatagatatgtcatatgttatttctataaactctc 33722379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 35350637 - 35350721
Alignment:
Q  99 aagttgtgttttcataagctatctcagagagcttaaggaaataagct----gaaaacagtttatggacatgtcataagttatttc 179  Q
    |||||||||||||||||||||||  | |||||||| | |||||||||    |||||||| |||||||||||||||||||| ||||    
T  35350637 aagttgtgttttcataagctatcctaaagagcttatgtaaataagctagctgaaaacagcttatggacatgtcataagttgtttc 35350721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 12564562 - 12564468
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||||||||  |||| |||| ||||||||||||||||||  |||| ||| ||||||||| ||| |   ||| ||||||||||||||    
T  12564562 tgttttcataagctatcttggagaacttatggaaataagctgaaaacaacttattgacttgtcataagctatatacgtaagctctcccaaacagt 12564468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 17420210 - 17420304
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||| |||||||||||||| | || | ||||||||| |||||||| ||||||||||||| ||||||| |||  |||| |||| | |||||||    
T  17420210 tgttttcgtaagctatctcagaaaactaatggaaataagttgaaaacaatttatggacatgtaataagttgttttcataagctcttcaaaacagt 17420304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 27140485 - 27140575
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    |||||| ||||||||||   ||||||||| | ||||||||||||||||  |||||||||||||||||| | ||||  ||||||||| ||||    
T  27140485 tgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttccttaaactctctcaaa 27140575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 19412660 - 19412575
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    ||||||| ||| | |||| ||| |||||| ||||||||||  ||| ||| |||||||||||||||||||| |||| ||||||||||    
T  19412660 tgttttcgtaaaccatcttagaaagcttatggaaataagccaaaatcagcttatggacatgtcataagttgtttccataaactctc 19412575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 12564937 - 12564877
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatg 165  Q
    ||||||||||||||||||   || ||||| ||||||||||||||||||| |||||||||||    
T  12564937 tgttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttatggacatg 12564877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 15579519 - 15579583
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||| | || ||||||||||||||    
T  15579519 ggaaataagctgagaacaacttatggacatgtcataagttgtttccacaagctctcccaaacagt 15579583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 37942026 - 37941946
Alignment:
Q  127 gagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    ||||||||| |||||||| || ||||  ||||||||||||||||| || ||||||||| ||||| |||||||  |||||||    
T  37942026 gagcttaagaaaataagccgagaacaacttatggacatgtcataaattgtttctataagctctctcaaacagcgttacaag 37941946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 45205031 - 45205168
Alignment:
Q  59 aaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttat 158  Q
    ||||||||||| ||||| ||||  ||||||| ||| ||| |||||||  ||||||||||||||    |||| | | ||||||||||||||||||  |||     
T  45205031 aaaagataaaataaagtcaaactatttccatataagctagaagttgt--tttcataagctatcatgtagagttcatggaaataagctgaaaacaacttag 45205128  T
Q  159 ggacatgtcataagttatttctataaactctcccaaacag 198  Q
    |||||| ||||||||| ||| |||  ||||| ||||||||    
T  45205129 ggacatatcataagttgtttttatggactctaccaaacag 45205168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 4202214 - 4202147
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||| |||||||||   |||||||| | |||||||||||||| || ||||||||||||||||||    
T  4202214 tgttttcaaaagctatctggcagagcttacgaaaataagctgaaaatagcttatggacatgtcataag 4202147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 4549605 - 4549510
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacag-tttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||||| |||   |||||||||  |||||  | ||||||||  ||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  4549605 tgttttcataagcaatcctggagagcttattgaaatttgttgaaaacaactttatagacatgtcataagttgtttctataagctctcccaaacagt 4549510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 4699676 - 4699609
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||| ||||| | |||||||||  |||||||||| ||||||| ||||| ||||||||||||||    
T  4699676 ttttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagtt 4699609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 6231848 - 6231805
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    
T  6231848 gaaataagctgaaaacagtttatggacatgtcattagttgtttc 6231805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 6279408 - 6279467
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgt 166  Q
    |||||||||||||||  |||||||||| ||||||| ||||||||||  ||||||||||||    
T  6279408 ttttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgt 6279467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 26184775 - 26184822
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||||||    
T  26184775 gagagcttatggaaataatctgaaaacagcttatggacatgtcataag 26184822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 37811859 - 37811926
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||||||| |||   ||||||| | ||||||||| ||||||||||||||| ||||||||||||    
T  37811859 tgttttcataagccatcatggagagctaatggaaataagttgaaaacagtttatgaacatgtcataag 37811926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 3063037 - 3063102
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttt 201  Q
    |||||||||||||||||   ||||||||||| ||||| | ||||||||||||||||| |||||||||    
T  3063037 ggaaataagctgaaaacgtcttatggacatggcataact-atttctataaactctcctaaacagttt 3063102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 5157140 - 5157222
Alignment:
Q  166 tcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataagttcaaataagaaaatccaaat 248  Q
    ||||||||| ||||||||| |||||||||||||||| |||||  |||||    | |||||||||||||||||  |||||||||    
T  5157140 tcataagttgtttctataagctctcccaaacagtttcacaagtgtttatgtccgtagataagttcaaataagtcaatccaaat 5157222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 7472318 - 7472384
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacag-tttatggacatgtcata 170  Q
    ||||| ||||||||||||  ||||||||| | ||||||||||||||||| |||||| ||||||||||    
T  7472318 tgtttccataagctatcttggagagcttatgaaaataagctgaaaacagttttatgaacatgtcata 7472384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 25479588 - 25479654
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    |||||||||||||||||  |||||||||| | ||||||||||||||||  | ||| |||||||||||    
T  25479588 tgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataa 25479654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 31517783 - 31517709
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||| | ||||||||||||||||| ||||| ||||||||| |||| |||  ||||  |||||||||||||    
T  31517783 gagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaacagt 31517709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 37593744 - 37593678
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||||| |   |||||||| | ||||||||||||||||| ||||| ||||||||||||||    
T  37593744 tttcataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagtt 37593678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 38867894 - 38867800
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||| |||||   ||| |||| | ||||||||| ||||||  | |||||||| |||||||||||||| |||| ||||| ||||||||    
T  38867894 tgttttcataagttatcttgaagaacttatgaaaataagctaaaaacaactgatggacatatcataagttatttccataagctctctcaaacagt 38867800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 15687131 - 15687082
Alignment:
Q  123 cagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||||| |  ||||||||||||||| |||||||||||||||||||    
T  15687131 cagagagcttatgacaataagctgaaaacaatttatggacatgtcataag 15687082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 206
Target Start/End: Original strand, 16322856 - 16322957
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    |||||||||| ||||| |   |||||||| ||||||||||| ||||||  |||||  |||| |||||||| |||| |||| |||||| ||||||||| ||    
T  16322856 tgttttcataggctattttgaagagcttatggaaataagctaaaaacaacttatgtgcatgacataagttgtttcgataatctctccaaaacagtttcac 16322955  T
Q  205 aa 206  Q
    ||    
T  16322956 aa 16322957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 17628636 - 17628685
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||| ||||||||||| |||||||||||||||||||| |||| ||||    
T  17628636 ggaaatatgctgaaaacagcttatggacatgtcataagttgtttccataa 17628685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 24460470 - 24460397
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttattt 178  Q
    |||||||||||||||||   |||||||||   |||||||||| |||||| ||||| |||||||||||| |||||    
T  24460470 tgttttcataagctatccttgagagcttacaaaaataagctggaaacagcttatgaacatgtcataagctattt 24460397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 24502866 - 24502801
Alignment:
Q  130 cttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||| ||||| ||| ||||| ||||    
T  24502866 cttacggaaataagctgaaaacaaattattgacatgtcataagttgtttctgtaagctctctcaaa 24502801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 28262682 - 28262613
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    |||||||||||| ||||  | ||| |||| ||||||||||| |||||| ||||||||||||| |||||||    
T  28262682 tgttttcataagttatcctatagaacttatggaaataagctaaaaacaatttatggacatgttataagtt 28262613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 30257646 - 30257756
Alignment:
Q  59 aaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttat 158  Q
    ||||||||||| ||||| ||||  ||||||| ||| ||  |||||||  |||||||| |||||   ||| |||||  |||||||||||||||||| ||||    
T  30257646 aaaagataaaataaagtcaaactgtttccatataagctttaagttgt--tttcataaactatcctggagggcttatagaaataagctgaaaacagcttat 30257743  T
Q  159 ggacatgtcataa 171  Q
    | |||||||||||    
T  30257744 gaacatgtcataa 30257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 33185989 - 33185924
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagtttt 202  Q
    ||||||| ||||||||| ||||||| ||||||||| || |||  |||||||||| |||||||||||    
T  33185989 aaataagttgaaaacaggttatggaaatgtcataatttgttttcataaactctctcaaacagtttt 33185924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 206
Target Start/End: Original strand, 34290243 - 34290344
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    ||||||||||||||||||   ||| |||| | ||||||||||||||||  ||||| | |||||||||| | |||  ||||| ||||||||| ||||| ||    
T  34290243 tgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataagcttttttaataaattctcccaaatagtttcac 34290342  T
Q  205 aa 206  Q
    ||    
T  34290343 aa 34290344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 45327623 - 45327676
Alignment:
Q  141 aagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaa 194  Q
    |||||||||||| ||||||||||||||||||||| |||| |||| ||| |||||    
T  45327623 aagctgaaaacaatttatggacatgtcataagttgtttccataagctcccccaa 45327676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 6292520 - 6292591
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    ||||||||| | ||||||||||||||||| ||||| |||||||||||| | ||| || ||| |||||||||||    
T  6292520 gagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgttt-taaaaattctcccaaaca 6292591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 11639460 - 11639412
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||| | ||||||||| ||||||| ||||||||||||||||||    
T  11639460 agagagcttatgaaaataagctaaaaacagcttatggacatgtcataag 11639412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 23902130 - 23902070
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatg 165  Q
    |||||||| ||||||||| |||||||||| |||| |||||||||||||  ||||| |||||    
T  23902130 tgttttcaaaagctatcttagagagcttatggaagtaagctgaaaacaacttatgcacatg 23902070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 28689508 - 28689448
Alignment:
Q  112 ataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||||  || |||||| | ||||||||||||||||  ||||||||||||||||||    
T  28689508 ataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataag 28689448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 30014139 - 30014067
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    ||||||||||||||   ||||| |||| ||||||||||||||||| | |  ||||||||||||||||| ||||    
T  30014139 ttttcataagctatgctagagaacttacggaaataagctgaaaaccgctattggacatgtcataagttgtttc 30014067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 33975596 - 33975644
Alignment:
Q  124 agagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||| | |||||||||||||| ||||||||||||| |||||||    
T  33975596 agagagcttatgaaaataagctgaaaatagtttatggacatatcataag 33975644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 35925681 - 35925764
Alignment:
Q  91 taaactacaagttgt--gttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||| |||||||  |||| |||||||||||   ||||| ||| ||||||||| ||||||||| ||||| ||||||||||||    
T  35925681 taaactataagttgtttgtttccataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataag 35925764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 44422708 - 44422800
Alignment:
Q  107 ttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||| ||||||||||   ||||||||| | |||||||||| |  ||| |||||||||||||||||| |||||  |||| |||||||| |||||    
T  44422708 tttttataagctatcctggagagcttatgaaaataagctgtagtcagcttatggacatgtcataagctattttcataagctctcccagacagt 44422800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 195
Target Start/End: Original strand, 3224429 - 3224520
Alignment:
Q  104 gtgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    ||||||| |||||||||   ||||| |||| | ||||||||||| ||||  |||||||||||||||||||  ||| |||||| |||| ||||    
T  3224429 gtgtttttataagctattctagagaacttatgaaaataagctgagaacaacttatggacatgtcataagtagtttgtataaattctctcaaa 3224520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 4622100 - 4622167
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||| |||| |||||||  ||||||||  | ||||||||| ||||||| ||||||||||||||||||    
T  4622100 tgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataag 4622167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 4868430 - 4868500
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||| | ||||||| ||||||||  |||| ||||||||||||||| |||| |||||||||| ||||||||    
T  4868430 agcttatgtaaataagttgaaaacaacttattgacatgtcataagttgtttc-ataaactctctcaaacagt 4868500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 6262776 - 6262835
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    |||||||||| ||||||  |||||||||| |||||||||||||  |||| ||||||||||    
T  6262776 gaaataagcttaaaacaacttatggacatatcataagttattttcataagctctcccaaa 6262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 6659521 - 6659580
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacat 164  Q
    ||||||||||||||| |  ||||||||||  |||||||||||||||||  ||||||||||    
T  6659521 tgttttcataagctaaccaagagagcttatcgaaataagctgaaaacaacttatggacat 6659580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 28077132 - 28077085
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaaca 152  Q
    |||||||||||||||| | ||||||||||  |||||||||||||||||    
T  28077132 tgttttcataagctattttagagagcttattgaaataagctgaaaaca 28077085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 172
Target Start/End: Original strand, 29723528 - 29723563
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29723528 aaataagttgaaaacagtttatggacatgtcataag 29723563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 29834968 - 29834889
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    |||||||||||||||||    |||||||| ||||||||  |||||| || ||||||||| ||| |||||| |||||||||    
T  29834968 tgttttcataagctatcatgtagagcttatggaaataaattgaaaaaagcttatggacacgtcgtaagttgtttctataa 29834889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 32859989 - 32859922
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctccc 192  Q
    ||||||||| ||||| |||||||||||| |||||| |||||| |||| || |||| || |||||||||    
T  32859989 gagagcttatggaaacaagctgaaaacaatttatgaacatgttataaattgtttccatgaactctccc 32859922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 247
Target Start/End: Complemental strand, 33723422 - 33723303
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttacaagcatttataatagcagataag 227  Q
    |||||| ||||||||||||||||||  | ||| ||||||||| || | |||| ||||  | |||||| |||| | |||||  |||||  ||| |||||||    
T  33723422 agcttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttccataagttttcccaagcagtctcacaagtgtttatggtagtagataag 33723323  T
Q  228 ttcaaataagaaaatccaaa 247  Q
    ||||||||||  ||||||||    
T  33723322 ttcaaataagtcaatccaaa 33723303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 46252739 - 46252676
Alignment:
Q  111 cataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||||||  ||||||||| | |||||| |||||||||  ||||| ||||||||||||||    
T  46252739 cataagctatcttggagagcttatgaaaataacctgaaaacaacttatgaacatgtcataagtt 46252676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 4548728 - 4548802
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttc 179  Q
    ||||||||||||||||||  |||||||| || ||||||||| ||||||  |||  | ||||||||||||| ||||    
T  4548728 tgttttcataagctatcttggagagcttcagaaaataagctaaaaacaacttacaggcatgtcataagttgtttc 4548802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 6102161 - 6102215
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatg 159  Q
    ||||||||||||||||||  ||||  ||| |||||||||||||||||| ||||||    
T  6102161 tgttttcataagctatctgggagaatttatggaaataagctgaaaacaatttatg 6102215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 195
Target Start/End: Original strand, 10439713 - 10439783
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 195  Q
    ||||| ||| ||||||||||||||| ||| ||||||||||||||||  || |||  |||| ||||||||||    
T  10439713 gagagtttatggaaataagctgaaagcagattatggacatgtcatagtttgttttcataagctctcccaaa 10439783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 13809943 - 13809981
Alignment:
Q  41 ataagttacttctttagcaaaagataaaacaaagttaaa 79  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  13809943 ataagttatttctttagcaaaagataaaataaagttaaa 13809981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 247
Target Start/End: Original strand, 17269257 - 17269399
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    |||||||||||||||||   ||||||||| || |||||| | ||||||  | ||| |||||||||||| |||||  |||| | || ||||||| | | ||    
T  17269257 tgttttcataagctatcctggagagcttacggtaataagttaaaaacaactcatgaacatgtcataaggtattttcataagcactaccaaacaatctcac 17269356  T
Q  205 aagcatttataatagcagataagttcaaataagaaaatccaaa 247  Q
    |||  |||| |  || |||||||||||||||||  ||||||||    
T  17269357 aagtgtttaaataagaagataagttcaaataagtcaatccaaa 17269399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 17778965 - 17779043
Alignment:
Q  106 gttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    |||||||||||||||||  ||||  ||  ||||||||| ||||||||||||||| ||| || ||||||| ||| |||||    
T  17778965 gttttcataagctatcttggagaatttttggaaataaggtgaaaacagtttatgaacacgttataagttgtttttataa 17779043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 30815684 - 30815630
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcc 191  Q
    |||||||||||||||| |||||| |||||||||||| | ||| ||||| ||||||    
T  30815684 aaataagctgaaaacattttatgaacatgtcataagctgtttatataagctctcc 30815630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 32515500 - 32515410
Alignment:
Q  109 ttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||||||||   |||||||||  || ||||| ||||||||  |||| ||||||||||| | | |||| |||| ||||||||||||||    
T  32515500 ttcataagctatcatggagagcttatagatataagttgaaaacaacttattgacatgtcatacgctgtttccataagctctcccaaacagt 32515410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 35017583 - 35017649
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    |||||||||||||| ||   ||||||||| ||||||||| |||||| |  |||||||||||||||||    
T  35017583 tgttttcataagctgtcctggagagcttatggaaataagttgaaaataacttatggacatgtcataa 35017649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 35058495 - 35058401
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||| |||||||||  |||| |||| | || |||||||||||||| ||| | |||||| |||||||||||   |||  |||||||||||||    
T  35058495 tgttttcagaagctatcttggagaacttacgaaagtaagctgaaaacagcttacgaacatgtaataagttattttagtaagttctcccaaacagt 35058401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 41195256 - 41195162
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    ||||||||||| ||||||  |||| |||| | |||||||||||||| || ||||  | |||||||||| ||||| || ||  |||||||||||||    
T  41195256 tgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaaatgtcataagctatttataaaagttctcccaaacagt 41195162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 45999330 - 45999284
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||| ||| ||| ||||||||||||||||||||| ||||||||||||    
T  45999330 agagattacggacataagctgaaaacagtttatgaacatgtcataag 45999284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 49125853 - 49125912
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgt 166  Q
    ||||||||||||||||||  ||||||||| ||||| ||||||||||||  |||| |||||||    
T  49125853 tgttttcataagctatct--gagagcttatggaaacaagctgaaaacaacttatagacatgt 49125912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 4034075 - 4033988
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||||||||||| || | |||||| ||||||||| |||| |||| | ||||||| ||||||||||||||  |||| ||||| ||||||    
T  4034075 tttcataagctatc-cataaagcttatggaaataagttgaagacagat-atggacaagtcataagttattttcataagctctctcaaaca 4033988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 8016284 - 8016333
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagtt 174  Q
    ||||||||| | ||||||||||||||||  ||||| ||||||||||||||    
T  8016284 gagagcttaggaaaataagctgaaaacaagttatgaacatgtcataagtt 8016333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 12477320 - 12477283
Alignment:
Q  135 ggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  12477320 ggaaataagctgaaaacaacttatggacatgtcataag 12477283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 15437970 - 15438055
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctc 190  Q
    |||||||||| ||||||   ||||| ||| |||||||||||||||  |  ||||| |||||||||||||| |||| |||| |||||    
T  15437970 tgttttcataggctatcctcgagagtttacggaaataagctgaaagtaacttatgaacatgtcataagttgtttccataacctctc 15438055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 15581292 - 15581353
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaaca 197  Q
    |||||| ||||||||||| |||| ||||||||||||||| |||| || | |||| |||||||    
T  15581292 gaaataggctgaaaacagcttatagacatgtcataagttgtttccattagctcttccaaaca 15581353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 28935918 - 28935845
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
    |||||||| ||||||||||| |||| |  |||||||||||||||||  |   ||||||| ||||||||||||||    
T  28935918 agagcttatggaaataagctaaaaaaaacttatggacatgtcataaactgactctataagctctcccaaacagt 28935845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 39777691 - 39777736
Alignment:
Q  126 agagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    |||||||||||||||||||| ||||||  |||||||||||| ||||    
T  39777691 agagcttaaggaaataagctaaaaacatcttatggacatgttataa 39777736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 8780453 - 8780385
Alignment:
Q  140 taagctgaaaacagtttatgga-catgtcataagttatttctataaactctcccaaacagttttacaag 207  Q
    |||||||||| ||||||||| | ||||||||||||| ||| ||||| ||||| ||||||| || |||||    
T  8780453 taagctgaaagcagtttatgaaacatgtcataagttgtttttataagctctctcaaacagattcacaag 8780385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 9602691 - 9602636
Alignment:
Q  137 aaataagctgaaaacagtttatggacatgtcataagttatttctataaactctccca 193  Q
    ||||||| ||||||||| ||||  |||||||||||| |||||| |||||||||||||    
T  9602691 aaataagttgaaaacagattatc-acatgtcataagctatttccataaactctccca 9602636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 10854763 - 10854807
Alignment:
Q  128 agcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||| ||||||||||||||||| || || ||||||||||||    
T  10854763 agcttaagaaaataagctgaaaacagcttgtgaacatgtcataag 10854807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 16981999 - 16981923
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttcta 181  Q
    |||| ||||||||||||   |||||||||   ||||||||| ||||||  |||||||||||||||||  ||||||||    
T  16981999 tgttatcataagctatcatggagagcttatataaataagctaaaaacaacttatggacatgtcataaactatttcta 16981923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 24968448 - 24968400
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||||  |||||| |||||||||||||||||||| ||| |||||    
T  24968448 gaaataagctagaaacagcttatggacatgtcataagttgtttttataa 24968400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 25432249 - 25432297
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||||  |||||| |||||||||||||||||||| ||| |||||    
T  25432249 gaaataagctagaaacagcttatggacatgtcataagttgtttttataa 25432297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 26185524 - 26185604
Alignment:
Q  112 ataagctatctcagagagcttaaggaaa-taagctgaaaacagtttatggacatgtcataagttatttctataaactctcc 191  Q
    |||||||||||  ||||||||| | ||| || | ||||||||  ||||| |||||||||||||| |||| |||||||||||    
T  26185524 ataagctatcttggagagcttacgaaaaatatgttgaaaacaacttatgcacatgtcataagttgtttcaataaactctcc 26185604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 30371186 - 30371230
Alignment:
Q  136 gaaataagctgaaaacagtttatggacatgtcataagttatttct 180  Q
    |||||||||||||||||  ||||||||||||||| |||| |||||    
T  30371186 gaaataagctgaaaacaacttatggacatgtcattagttgtttct 30371230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 35590952 - 35590908
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaaaca 152  Q
    ||||||||||||||   ||||||||| ||||||||||||||||||    
T  35590952 tttcataagctatcatggagagcttatggaaataagctgaaaaca 35590908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 36151546 - 36151502
Alignment:
Q  127 gagcttaaggaaataagctgaaaacagtttatggacatgtcataa 171  Q
    ||||||| | ||||||| ||||||||| |||||||||||||||||    
T  36151546 gagcttatgaaaataagttgaaaacaggttatggacatgtcataa 36151502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 39270488 - 39270428
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatg 165  Q
    ||||||||||||||| |  ||||||| || | ||||||| ||||||||| |||||||||||    
T  39270488 tgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacatg 39270428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 46499917 - 46499853
Alignment:
Q  125 gagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactct 189  Q
    ||||||||| | ||||||| | ||||||||||| ||||||||||||||   |||| |||||||||    
T  46499917 gagagcttatgaaaataaggttaaaacagtttagggacatgtcataagccgtttccataaactct 46499853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 199
Target Start/End: Original strand, 27513 - 27677
Alignment:
Q  33 gcttatatataagttacttctttagcaaaagataaaacaaagttaaacgttttccatgtaaactacaagttgtgttttcataagctatctcagagagctt 132  Q
    |||||| ||||||||| |||| || || ||||||||| ||||| |||   ||| ||| ||||||| |||||||  |||||||| ||||||  |  ||| |    
T  27513 gcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgt--tttcataaactatcttggtaagcgt 27610  T
Q  133 aaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagt 199  Q
      ||||||||||||||||||  |||| | ||||||||||| |||||| |||| ||||||||||||||    
T  27611 gtggaaataagctgaaaacaacttatagccatgtcataagctatttccataagctctcccaaacagt 27677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 27017 - 27075
Alignment:
Q  114 aagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  27017 aagctatcatagagagcttatggaaataagctgaaaacagtttatgcacatgtcataag 27075  T

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Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 105 - 247
Target Start/End: Complemental strand, 160036 - 159894
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaacagttttac 204  Q
    |||||||||||||||||  | |||||||  ||||||||||||||||| | |||| ||||||||||||  | |||| || |  ||||| ||| ||||| ||    
T  160036 tgttttcataagctatcctaaagagcttgtggaaataagctgaaaactgcttatagacatgtcataaactgtttccattagttctccaaaatagtttcac 159937  T
Q  205 aagcatttataatagcagataagttcaaataagaaaatccaaa 247  Q
    |||  |||||| ||| ||||||| |||||||||  ||||||||    
T  159936 aagtgtttatattagtagataagctcaaataagccaatccaaa 159894  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 306333 - 306400
Alignment:
Q  105 tgttttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataag 172  Q
    |||||||||||||||||  |||||||||| | || |||||||||||||| |||||| |||||||||||    
T  306333 tgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataag 306400  T

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Target: scaffold0147 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 12758 - 12688
Alignment:
Q  114 aagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataa 184  Q
    ||||||||| |||||||||| |||  |||||||||||||  |||||||||||||||||||| |||| ||||    
T  12758 aagctatcttagagagcttatggagctaagctgaaaacaacttatggacatgtcataagttgtttccataa 12688  T

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Target: scaffold0153 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 6554 - 6477
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaa 185  Q
    |||||||||| ||| | ||||||||| |||||||| |||||||||  |||| ||||||||||| ||| ||||||||||    
T  6554 tttcataagcaatcccggagagcttatggaaataaactgaaaacaacttatagacatgtcataggttgtttctataaa 6477  T

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Target: scaffold0153; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 13574 - 13497
Alignment:
Q  108 tttcataagctatctcagagagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaa 185  Q
    |||||||||| ||| | ||||||||| |||||||| |||||||||  |||| ||||||||||| ||| ||||||||||    
T  13574 tttcataagcaatcccggagagcttatggaaataaactgaaaacaacttatagacatgtcataggttgtttctataaa 13497  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 38649 - 38692
Alignment:
Q  155 ttatggacatgtcataagttatttctataaactctcccaaacag 198  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||    
T  38649 ttatggacatgtcataagttatttccataaactcctccaaacag 38692  T

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