View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11791_high_12 (Length: 268)
Name: NF11791_high_12
Description: NF11791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11791_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 15 - 256
Target Start/End: Complemental strand, 5673890 - 5673649
Alignment:
| Q |
15 |
ctatgtgttaggcgtttctcatagtgtctcaatcaaatatttattttccacccattattattcatgaaccaaccagcgatcaaatcaaaagaagtttgga |
114 |
Q |
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| T |
5673890 |
ctatgtgttaggcgtttctcatagtgtctcaatcaaatatttattttccacccattattattcatgaaccaaccagcgatcaaatcaaaagaagtttgaa |
5673791 |
T |
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| Q |
115 |
gttttggttgcacagtccatccgacagctgattctcttccaaatttaaacatctttttaaggtctgtcccaaaacatgtagaaaatttgctacatttaca |
214 |
Q |
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|||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5673790 |
gttttggttgcatagtccatccgacagctgattctattacaaatttaaacatctttttaaggtctgtcccaaaacatgtagaaaatttgctacatttaca |
5673691 |
T |
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| Q |
215 |
taccttaagaatattcatgaattgaaaccaaaacattatctc |
256 |
Q |
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| T |
5673690 |
taccttaagaatattcatgaattgaaaccaaaacattatctc |
5673649 |
T |
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