View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11791_high_17 (Length: 231)
Name: NF11791_high_17
Description: NF11791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11791_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 24941489 - 24941280
Alignment:
| Q |
1 |
cgccgtcaatcctatcttaattctcaaagtattaagattaagaatataaacacaaatacaccaatacatgacatgtaataatttcagagtgaaagttgat |
100 |
Q |
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| T |
24941489 |
cgccgtcaatcctatcttaattctcaaagtattaagattaagaatataaacacaaatacaccaatacatgacatgtaat---ttcagagtgaaagttgat |
24941393 |
T |
|
| Q |
101 |
agagataatataatgatcgtgatggggaactcatgcaactgaggattctcctgtgtgctcaatcacctatatgttcattcacaagaaggaatggtattaa |
200 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24941392 |
agagataatataatgatcgtgatggggaacacatgcaactgaggattctcctgtgtgctcaatcacctatatgttcattcacaagaaggaatggtattaa |
24941293 |
T |
|
| Q |
201 |
aacggggcacagg |
213 |
Q |
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||||||||||||| |
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| T |
24941292 |
aacggggcacagg |
24941280 |
T |
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