View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11791_high_6 (Length: 424)

Name: NF11791_high_6
Description: NF11791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11791_high_6
NF11791_high_6
[»] chr1 (36 HSPs)
chr1 (3-420)||(23378268-23378683)
chr1 (4-175)||(23591698-23591867)
chr1 (4-175)||(1502729-1502897)
chr1 (4-175)||(38812740-38812909)
chr1 (285-356)||(23377478-23377549)
chr1 (4-175)||(13321876-13322045)
chr1 (4-175)||(30171879-30172048)
chr1 (4-175)||(30187420-30187589)
chr1 (4-175)||(23576423-23576591)
chr1 (6-175)||(6754474-6754640)
chr1 (20-168)||(36490795-36490941)
chr1 (6-175)||(41624832-41624998)
chr1 (4-175)||(6180186-6180355)
chr1 (4-175)||(39150336-39150504)
chr1 (4-152)||(39627603-39627749)
chr1 (4-175)||(35512725-35512894)
chr1 (15-159)||(47355403-47355544)
chr1 (4-170)||(7824872-7825036)
chr1 (4-175)||(22167335-22167504)
chr1 (15-159)||(7520022-7520164)
chr1 (58-175)||(52337821-52337935)
chr1 (4-175)||(17919454-17919622)
chr1 (199-265)||(18577996-18578062)
chr1 (5-93)||(5857990-5858079)
chr1 (1-74)||(29924356-29924429)
chr1 (124-175)||(25465276-25465327)
chr1 (4-116)||(34050351-34050461)
chr1 (4-70)||(44918025-44918091)
chr1 (4-115)||(3121119-3121227)
chr1 (5-70)||(8062206-8062271)
chr1 (66-121)||(33048175-33048227)
chr1 (36-93)||(35941110-35941167)
chr1 (12-89)||(43317498-43317575)
chr1 (16-113)||(50079870-50079966)
chr1 (4-69)||(51382372-51382437)
chr1 (20-121)||(25956665-25956764)
[»] chr4 (41 HSPs)
chr4 (4-167)||(2096871-2097032)
chr4 (4-175)||(24684836-24685006)
chr4 (4-175)||(9759151-9759319)
chr4 (4-173)||(19468194-19468361)
chr4 (6-173)||(19450911-19451076)
chr4 (4-175)||(16667393-16667562)
chr4 (4-168)||(50352303-50352464)
chr4 (4-175)||(17409824-17409993)
chr4 (6-175)||(49181074-49181241)
chr4 (4-112)||(7349689-7349794)
chr4 (18-88)||(10813587-10813658)
chr4 (4-173)||(40049559-40049725)
chr4 (4-167)||(8736828-8736988)
chr4 (4-175)||(23545476-23545645)
chr4 (4-175)||(27019260-27019429)
chr4 (4-175)||(34941278-34941447)
chr4 (41-167)||(37784877-37785001)
chr4 (4-113)||(6875501-6875608)
chr4 (4-120)||(25843291-25843406)
chr4 (19-175)||(27362406-27362560)
chr4 (4-167)||(52391298-52391459)
chr4 (4-175)||(54495646-54495815)
chr4 (4-69)||(10389380-10389445)
chr4 (5-119)||(33632267-33632379)
chr4 (15-72)||(40681960-40682017)
chr4 (4-69)||(49228357-49228422)
chr4 (60-166)||(1378075-1378178)
chr4 (5-119)||(19838756-19838866)
chr4 (17-167)||(39876844-39876991)
chr4 (4-67)||(45742368-45742431)
chr4 (60-168)||(55813920-55814026)
chr4 (28-119)||(13009820-13009909)
chr4 (4-175)||(47326901-47327070)
chr4 (4-175)||(47341697-47341866)
chr4 (4-93)||(49332333-49332423)
chr4 (4-81)||(10658544-10658621)
chr4 (4-81)||(10872689-10872766)
chr4 (5-167)||(51691343-51691502)
chr4 (4-71)||(3728249-3728317)
chr4 (99-175)||(18882276-18882352)
chr4 (57-114)||(35645071-35645126)
[»] chr7 (26 HSPs)
chr7 (4-114)||(42750289-42750396)
chr7 (5-175)||(47457470-47457638)
chr7 (185-265)||(19017845-19017925)
chr7 (3-175)||(26300572-26300740)
chr7 (4-175)||(24462964-24463132)
chr7 (4-175)||(33342989-33343157)
chr7 (6-175)||(7170005-7170171)
chr7 (11-175)||(25709408-25709570)
chr7 (4-175)||(46290011-46290179)
chr7 (4-175)||(4969773-4969942)
chr7 (4-175)||(19889341-19889509)
chr7 (4-113)||(19868114-19868221)
chr7 (4-175)||(34270266-34270430)
chr7 (4-175)||(9331962-9332130)
chr7 (4-175)||(23982764-23982933)
chr7 (97-175)||(33072072-33072150)
chr7 (5-175)||(36548469-36548636)
chr7 (4-157)||(47707911-47708065)
chr7 (31-121)||(3530177-3530264)
chr7 (31-175)||(8091321-8091463)
chr7 (129-175)||(26050470-26050516)
chr7 (129-175)||(26059829-26059875)
chr7 (97-175)||(29398143-29398221)
chr7 (4-69)||(24250314-24250379)
chr7 (4-69)||(29398227-29398292)
chr7 (14-93)||(12650831-12650911)
[»] chr8 (45 HSPs)
chr8 (4-175)||(26682068-26682237)
chr8 (4-175)||(6818017-6818186)
chr8 (4-175)||(31812113-31812282)
chr8 (4-175)||(3306064-3306232)
chr8 (4-175)||(20514632-20514802)
chr8 (4-175)||(2161388-2161556)
chr8 (4-69)||(7750668-7750733)
chr8 (4-168)||(12131983-12132145)
chr8 (4-175)||(9580118-9580287)
chr8 (4-111)||(14816198-14816303)
chr8 (4-111)||(14829437-14829542)
chr8 (4-119)||(38843704-38843817)
chr8 (4-69)||(11923015-11923080)
chr8 (4-69)||(38527821-38527886)
chr8 (40-175)||(39024866-39024998)
chr8 (4-175)||(12189597-12189766)
chr8 (4-175)||(12434025-12434194)
chr8 (33-119)||(34741730-34741813)
chr8 (4-90)||(8284660-8284747)
chr8 (4-168)||(45005970-45006131)
chr8 (12-89)||(5298077-5298157)
chr8 (4-175)||(13327950-13328118)
chr8 (4-111)||(35678347-35678452)
chr8 (4-175)||(36967079-36967248)
chr8 (4-69)||(7140571-7140636)
chr8 (4-69)||(9824959-9825024)
chr8 (24-118)||(16445801-16445893)
chr8 (4-69)||(40210933-40210998)
chr8 (5-65)||(11947016-11947076)
chr8 (4-112)||(9743862-9743967)
chr8 (11-119)||(10974619-10974725)
chr8 (6-175)||(28014867-28015032)
chr8 (97-175)||(2083078-2083156)
chr8 (4-50)||(11117129-11117175)
chr8 (4-175)||(26834561-26834730)
chr8 (4-115)||(32186186-32186295)
chr8 (2-52)||(37523756-37523806)
chr8 (4-46)||(38213081-38213123)
chr8 (31-89)||(44091346-44091404)
chr8 (4-69)||(10129104-10129169)
chr8 (4-69)||(12346006-12346071)
chr8 (31-88)||(45516316-45516373)
chr8 (12-172)||(1844572-1844731)
chr8 (6-89)||(35583368-35583453)
chr8 (5-69)||(40568314-40568378)
[»] chr2 (32 HSPs)
chr2 (4-174)||(15411632-15411800)
chr2 (4-175)||(9747317-9747486)
chr2 (4-168)||(5583574-5583735)
chr2 (4-175)||(14377425-14377593)
chr2 (4-89)||(12438740-12438825)
chr2 (13-175)||(45062207-45062367)
chr2 (4-175)||(23932565-23932734)
chr2 (4-175)||(27665053-27665221)
chr2 (4-167)||(43806360-43806521)
chr2 (41-175)||(24729586-24729718)
chr2 (4-168)||(34213965-34214129)
chr2 (4-112)||(34817544-34817649)
chr2 (4-93)||(39367059-39367149)
chr2 (4-175)||(7757795-7757963)
chr2 (4-69)||(12016667-12016732)
chr2 (57-159)||(2579983-2580082)
chr2 (5-69)||(7720116-7720180)
chr2 (99-175)||(26003355-26003431)
chr2 (29-113)||(2051639-2051721)
chr2 (4-90)||(43388857-43388944)
chr2 (4-175)||(19228426-19228594)
chr2 (4-119)||(36612796-36612909)
chr2 (4-119)||(36620647-36620760)
chr2 (4-54)||(36909503-36909553)
chr2 (4-70)||(39904159-39904225)
chr2 (4-69)||(4579901-4579966)
chr2 (4-61)||(16754971-16755028)
chr2 (4-69)||(16919266-16919331)
chr2 (4-69)||(22705455-22705520)
chr2 (4-61)||(26003612-26003669)
chr2 (12-95)||(25998088-25998172)
chr2 (4-174)||(26229864-26230030)
[»] chr6 (18 HSPs)
chr6 (4-175)||(6016856-6017025)
chr6 (4-157)||(30623326-30623477)
chr6 (4-167)||(8977483-8977644)
chr6 (4-175)||(34692354-34692523)
chr6 (4-175)||(14228135-14228303)
chr6 (4-175)||(28943778-28943946)
chr6 (21-111)||(29730295-29730383)
chr6 (6-175)||(10887031-10887198)
chr6 (4-173)||(33017725-33017891)
chr6 (4-159)||(1017803-1017956)
chr6 (4-175)||(29863311-29863480)
chr6 (4-69)||(1814894-1814959)
chr6 (4-69)||(3485711-3485776)
chr6 (4-175)||(17552596-17552764)
chr6 (4-69)||(24979262-24979327)
chr6 (6-61)||(17596315-17596370)
chr6 (4-175)||(18332697-18332866)
chr6 (4-69)||(5363005-5363070)
[»] chr5 (26 HSPs)
chr5 (4-175)||(30839782-30839950)
chr5 (4-175)||(36597580-36597748)
chr5 (6-175)||(8103589-8103755)
chr5 (4-168)||(18841721-18841883)
chr5 (4-175)||(3398220-3398389)
chr5 (4-175)||(40512952-40513120)
chr5 (4-111)||(5958196-5958301)
chr5 (4-175)||(11636732-11636900)
chr5 (66-175)||(15240959-15241065)
chr5 (12-93)||(10665053-10665134)
chr5 (4-61)||(11360186-11360243)
chr5 (200-241)||(20058109-20058150)
chr5 (4-48)||(11250090-11250134)
chr5 (15-112)||(28629890-28629984)
chr5 (4-48)||(33072677-33072721)
chr5 (4-175)||(2795524-2795692)
chr5 (16-70)||(11375972-11376026)
chr5 (97-159)||(15820317-15820379)
chr5 (83-173)||(23995427-23995516)
chr5 (98-168)||(31567507-31567577)
chr5 (4-70)||(34578012-34578078)
chr5 (31-114)||(40309497-40309580)
chr5 (4-69)||(24014800-24014865)
chr5 (57-175)||(6863610-6863725)
chr5 (99-175)||(7162934-7163010)
chr5 (192-224)||(24015674-24015706)
[»] chr3 (31 HSPs)
chr3 (4-175)||(2571269-2571437)
chr3 (4-175)||(10307767-10307935)
chr3 (4-173)||(54527717-54527884)
chr3 (4-175)||(38389447-38389616)
chr3 (4-175)||(50204403-50204572)
chr3 (3-112)||(20938056-20938162)
chr3 (6-175)||(46492352-46492519)
chr3 (4-175)||(51618050-51618216)
chr3 (21-114)||(53794781-53794872)
chr3 (13-91)||(2379162-2379238)
chr3 (36-165)||(38786343-38786468)
chr3 (4-175)||(11610915-11611083)
chr3 (11-94)||(24569324-24569408)
chr3 (6-89)||(37444149-37444232)
chr3 (3-90)||(40330381-40330468)
chr3 (4-167)||(13495294-13495455)
chr3 (4-167)||(42180052-42180213)
chr3 (4-92)||(37055455-37055544)
chr3 (4-93)||(47386922-47387013)
chr3 (97-173)||(51401531-51401607)
chr3 (4-55)||(8497550-8497601)
chr3 (11-175)||(45983516-45983675)
chr3 (4-90)||(46845531-46845618)
chr3 (15-89)||(13879899-13879973)
chr3 (129-175)||(25633121-25633167)
chr3 (3-69)||(26200733-26200799)
chr3 (4-167)||(12515491-12515651)
chr3 (98-175)||(23523038-23523115)
chr3 (4-88)||(30214103-30214187)
chr3 (4-69)||(32321835-32321899)
chr3 (97-174)||(49396471-49396548)
[»] scaffold0111 (1 HSPs)
scaffold0111 (4-175)||(37123-37292)
[»] scaffold0631 (1 HSPs)
scaffold0631 (5-48)||(443-486)
[»] scaffold0129 (1 HSPs)
scaffold0129 (11-119)||(13723-13829)
[»] scaffold0618 (1 HSPs)
scaffold0618 (31-89)||(8506-8564)
[»] scaffold0061 (1 HSPs)
scaffold0061 (4-175)||(52788-52956)
[»] scaffold0036 (1 HSPs)
scaffold0036 (5-116)||(94086-94195)
[»] scaffold0017 (1 HSPs)
scaffold0017 (4-175)||(145678-145846)
[»] scaffold0011 (1 HSPs)
scaffold0011 (4-175)||(13086-13254)
[»] scaffold0305 (1 HSPs)
scaffold0305 (66-168)||(18012-18111)
[»] scaffold0149 (1 HSPs)
scaffold0149 (4-48)||(22460-22504)


Alignment Details
Target: chr1 (Bit Score: 378; Significance: 0; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 3 - 420
Target Start/End: Complemental strand, 23378683 - 23378268
Alignment:
Q  3 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23378683 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacaattatttgttaaaaagttacactatatt 23378584  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatgagtctaggctttataccaacaataaaac 202  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23378583 taatataaaatgtacaaatagcaattcaaatttactattttgaaattcttaacatgttcaaatttgtacatgagtctaggc-ttataccaacaataaaac 23378485  T
Q  203 atcatcaaataaaattatctaatgaacatgaacaaaacaagagcctatatatacacacaactttatcctaatcgatcagagcgcgtccatgaaattcatc 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  23378484 atcatcaaataaaattatctaatgaacatgaacaaaacaagagcctatatatacacacaactttatcctaatcgatcggagcgcgtccatgaaattcat- 23378386  T
Q  303 cgtaaaatggattgcgttaaaactgtagcgatttatatggaggtttctaaaatcgattgattataacgtatgacctaccacatgtgtcagtatattgatt 402  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23378385 cgtaaaatggactgcgttaaaactgtagcgatttatatggaggtttctaaaatcgattgattataacgtatgacctaccacatgtgtcagtatattgatt 23378286  T
Q  403 gtctccgtactccagacc 420  Q
    || | |||||||||||||    
T  23378285 gtgttcgtactccagacc 23378268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 23591698 - 23591867
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||| |||||||||||| ||| |||||||||||||| || | |||||| |||||||||||   ||||||    
T  23591698 gtttgtctaacatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagtta---tatatt 23591794  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||| ||||||||||| |  |||| |||| ||   ||||  || |||||||||||| |||||||| ||||||    
T  23591795 taatacaaaatgtacaagttccaatgcaaagttgttatttaaaatttcttaacatgtgcaaatttgcacatga 23591867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 1502897 - 1502729
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||| |||| ||||||   |||||||||   |||||||    
T  1502897 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaacaacaattatttaacaaaaagtta---tatattt 1502801  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| |||||  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  1502800 aatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 1502729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 38812740 - 38812909
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    ||||||||||||||||||| |||  | |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  38812740 gtttgtttaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttagaaaacaacaattatttattcaaaagtt---ttatatt 38812836  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| |||||||||| |  ||||  ||| || | |||||||| |||||||||||| |||||||| ||||||    
T  38812837 taatattaaatgtacaagtttcaatataaaatttctattttgaacttcttaacatgtgcaaatttgcacatga 38812909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 356
Target Start/End: Complemental strand, 23377549 - 23377478
Alignment:
Q  285 gcgtccatgaaattcatccgtaaaatggattgcgttaaaactgtagcgatttatatggaggtttctaaaatc 356  Q
    |||||||||||||||||| ||||||||||||||||||||| || || |||| ||| ||||||||||||||||    
T  23377549 gcgtccatgaaattcatctgtaaaatggattgcgttaaaattgcagtgattgataaggaggtttctaaaatc 23377478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 13321876 - 13322045
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| |||  | |||||||||||||||| | || ||||||||| |||||||  |||| |||||| || |||||||    ||||||    
T  13321876 gtttgtctaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattttttcaaaagttt---tatatt 13321972  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||||||||||  |||| |||| || | ||||| || |||||||||| | |||||||| ||||||    
T  13321973 taatattaaatgtacaaattccaatacaaaatttctattttaaacttcttaacatatgcaaatttgcacatga 13322045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 30171879 - 30172048
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| ||||||||| |||| || | |||||| |||||||| |||   |||||    
T  30171879 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctac---atatt 30171975  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  30171976 taatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 30172048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 30187420 - 30187589
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| ||||||||| |||| || | |||||| |||||||| |||   |||||    
T  30187420 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctac---atatt 30187516  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  30187517 taatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 30187589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 23576591 - 23576423
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||| ||||||||| || |||||||   |||||||| ||| || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  23576591 gtttgtctaacatctgcaatattgcacatgttaaggtaactaaaagtaacaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 23576495  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  23576494 aatacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 23576423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 6754474 - 6754640
Alignment:
Q  6 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 105  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  6754474 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 6754570  T
Q  106 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  6754571 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 6754640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 36490795 - 36490941
Alignment:
Q  20 caatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtaca 118  Q
    ||||||| || |||||||| ||| ||||| || ||| |||||||||||||  |||| |||||| |||||||||||   |||||| |||| ||||||||||    
T  36490795 caatattgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagtta---tatattaaatacaaaatgtaca 36490891  T
Q  119 aatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 168  Q
    | |  |||| |||| |||| ||||| || |||||||||||| ||||||||    
T  36490892 agttccaatgcaaagttactattttaaacttcttaacatgtgcaaatttg 36490941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 41624832 - 41624998
Alignment:
Q  6 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 105  Q
    |||| |||||||||||||||| || |||||||| ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  41624832 ttgtctaacatgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 41624928  T
Q  106 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||| | |||||||| ||||||    
T  41624929 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatatgcaaatttgcacatga 41624998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 6180186 - 6180355
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||| | | |||||| || |||||||    ||||||    
T  6180186 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaattataattatttatttaaaagtt---ttatatt 6180282  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| |||||||||| |  ||||  ||| || | ||||| || |||||||||||| |||||||| ||||||    
T  6180283 taatattaaatgtacaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 6180355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 39150504 - 39150336
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  39150504 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 39150409  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||   ||||||  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  39150408 taatataaaaaacacaaattccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 39150336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 39627749 - 39627603
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||||||||||||||||||| |||||||   |||||||| ||  ||||||| ||||||||  |||| | | || || ||||||||||   ||||    
T  39627749 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttaca---tatt 39627653  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattctt 152  Q
    |||||||||||| |||| |  |||| ||||||||| |||||||| |||||    
T  39627652 taatataaaatgcacaagttacaatacaaatttactattttgaacttctt 39627603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 35512725 - 35512894
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||| | || |||||||    ||||||    
T  35512725 gtttgtctaacatgtgcaacattgcaaatgttaaaacaactaatagtagtaactttttcttggaaaacaacatttatatattcaaaagtt---ttatatt 35512821  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| |||||| ||| |  ||||  ||| || | ||||| || |||||||||||| |||||||| ||||||    
T  35512822 taatattaaatgtgcaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 35512894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 47355544 - 47355403
Alignment:
Q  15 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatg 114  Q
    |||||||||||| || |||||||| ||||||||| ||  |||||||||||||||| |||| ||| || | |||||| ||   |||  |||||||||||||    
T  47355544 atgtgcaatattgcacatgttaaagcaactaaaagtataaactttttattgaaaacaacaattacttatcaaaaaggta---tatcattaatataaaatg 47355448  T
Q  115 tacaaatagcaattcaaatttaccattttgaaattcttaacatgt 159  Q
     |||| |  |||| ||||||||  ||||| || ||||||||||||    
T  47355447 aacaagttccaatacaaatttattattttaaatttcttaacatgt 47355403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 170
Target Start/End: Complemental strand, 7825036 - 7824872
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||  ||| |||||| || |||||||    ||||||    
T  7825036 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaaccacaattatttattcaaaagtt---ttatatt 7824940  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgta 170  Q
    |||||| ||||||||||||  || | |||| ||   ||||| || || ||||||||| ||||||||||    
T  7824939 taatattaaatgtacaaatttcattacaaaatttttattttaaactttttaacatgtgcaaatttgta 7824872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 22167335 - 22167504
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 101  Q
    |||||| || ||||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  22167335 gtttgtctaccatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 22167430  T
Q  102 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||| |||||||||| |  |||| |||| || | ||||| || |||||| ||||| |||||||| ||||||    
T  22167431 ttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 22167504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 7520164 - 7520022
Alignment:
Q  15 atgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatataaaat 113  Q
    |||||||||||| || |||||||| ||||||||| || ||| ||||||||  ||||||| | |||||| |||||| ||||   |||||| |||| |||||    
T  7520164 atgtgcaatattgcacatgttaaagcaactaaaagtagtaaatttttattaaaaaataatacttatttattaaaatgtta---tatattaaatacaaaat 7520068  T
Q  114 gtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 159  Q
    ||||||||  |||| |||| ||   ||||| || ||||||||||||    
T  7520067 gtacaaatttcaatgcaaagttgttattttaaacttcttaacatgt 7520022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 52337821 - 52337935
Alignment:
Q  58 ttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacat 157  Q
    ||||||| | ||||||| |||||| ||||||| |||   |||||||||||||||||  | || | ||||| || |||||| ||||| || ||||||||||    
T  52337821 ttttattaataataacaattatttattaaaaattta---tatatttaatataaaatacataagttgcaatgcatatttactattttaaacttcttaacat 52337917  T
Q  158 gttcaaatttgtacatga 175  Q
    ||||||| |||| |||||    
T  52337918 gttcaaacttgttcatga 52337935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 17919454 - 17919622
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||||||||||||||||  | |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  17919454 gtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 17919549  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||   ||||||  ||| ||||| |||| | ||| || ||||||  |||| |||||||| ||||||    
T  17919550 taatataaaaaacacaaattccaagtcaaagttactactttaaacttcttattatgtgcaaatttgcacatga 17919622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 18577996 - 18578062
Alignment:
Q  199 aaacatcatcaaataaaattatctaatgaacatgaacaaaacaagagcctatatatacacacaactt 265  Q
    |||||||||||||||||| |||||||||  ||| | |||||||| | ||||||| ||||||||||||    
T  18577996 aaacatcatcaaataaaactatctaatgtgcatcatcaaaacaaaatcctatatctacacacaactt 18578062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 5857990 - 5858079
Alignment:
Q  5 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataa-cagttatttgttaaaaagtta 93  Q
    ||||||||||||||||||||||  | || ||||||||| ||||| ||| ||||||||||| |||| ||  | |||||| |||||||||||    
T  5857990 tttgtttaacatgtgcaatatttgacatattaaaacaattaaaagtaacaactttttattaaaaacaagtaattatttattaaaaagtta 5858079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29924429 - 29924356
Alignment:
Q  1 tttgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataaca 74  Q
    ||||||||| |||||| |||||  ||||| ||| |||| ||||||||| ||| || ||||||||||||||||||    
T  29924429 tttgtttgtctaacatatgcaacgttacacatgctaaagcaactaaaaataacaattttttattgaaaataaca 29924356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 175
Target Start/End: Original strand, 25465276 - 25465327
Alignment:
Q  124 caattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||||| |||||||| |||||||||||| |||||||| ||||||    
T  25465276 caatgcaaatttactattttgaacttcttaacatgtgcaaatttgcacatga 25465327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 34050461 - 34050351
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || |||||||| |||| |||| ||| || || |||||| |||| |||| |||||| | ||||| |||   ||||||    
T  34050461 gtttgtctaacatgtgcaatattgcacatgttaaagcaaccaaaagtaacaaattattattgaaaaacaacaattatttatcaaaaaatta---tatatt 34050365  T
Q  103 taatataaaatgta 116  Q
     |||||||||||||    
T  34050364 aaatataaaatgta 34050351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 44918025 - 44918091
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 70  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||| ||||||||||||||    
T  44918025 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaat 44918091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 3121119 - 3121227
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| ||| |||||||||||||||||||||||   || ||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  3121119 gtttgtctaatatgtgcaatattacatatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 3121215  T
Q  104 aatataaaatgt 115  Q
    |||| |||||||    
T  3121216 aatacaaaatgt 3121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 8062206 - 8062271
Alignment:
Q  5 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 70  Q
    ||||||||||||||||||||||  | |||||||   |||||||| || |||||||| |||||||||    
T  8062206 tttgtttaacatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaat 8062271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 33048227 - 33048175
Alignment:
Q  66 aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaat 121  Q
    ||||||||| |||||| |||||||||||   ||||||||||||||||| |||||||    
T  33048227 aaaataacaattatttattaaaaagtta---tatatttaatataaaatatacaaat 33048175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 35941167 - 35941110
Alignment:
Q  36 aaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagtta 93  Q
    |||| |||||||| || |||||||||||| |||| |||| |||||| |||||||||||    
T  35941167 aaaagaactaaaagtattaactttttattaaaaacaacatttatttattaaaaagtta 35941110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 43317498 - 43317575
Alignment:
Q  12 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 89  Q
    |||||||||||||||  | |||||||| ||||||||| || ||||| ||| ||||||| |||| | |||| |||||||    
T  43317498 aacatgtgcaatattgtacatgttaaagcaactaaaagtagtaactattttttgaaaacaacaatcatttattaaaaa 43317575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 50079870 - 50079966
Alignment:
Q  16 tgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaat 113  Q
    |||||||||||| |||||||||| ||| ||||| || |||||||||||| |||| |  | |||||| ||||||| ||| |   |||||||||||||||    
T  50079870 tgtgcaatattatatatgttaaagcaattaaaa-tagtaactttttattaaaaaaattaattatttattaaaaaattatatattatttaatataaaat 50079966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 51382372 - 51382437
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  51382372 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 51382437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 25956665 - 25956764
Alignment:
Q  20 caatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtaca 118  Q
    ||||||| || || ||||||||||||| | |||||||||||| ||| |||| |||| |||||| || |||||||    |||||||||||| ||||||| |    
T  25956665 caatattgcacatattaaaacaactaataataataactttttcttgaaaaacaacaattatttatttaaaagtt---ttatatttaatattaaatgtata 25956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 2096871 - 2097032
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || | |||||| ||||||||| | | ||||||||||||||||  |||| |||||| |||||||||||   ||||||    
T  2096871 gtttgtctaacatgtgcaatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagtta---tatatt 2096967  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 167  Q
    |||||||||||| |||| |  |||| |||| ||||||||||||| |||||||||||| |||||||    
T  2096968 taatataaaatgcacaagttccaatacaaacttaccattttgaacttcttaacatgtgcaaattt 2097032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 24684836 - 24685006
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt--gaaaataacagttatttgttaaaaagttacactatat 101  Q
    ||||||||||||| ||||| |||||| |||||||||||||||| | || ||||||||| ||  ||||| |||| |||||| || |||||||    |||||    
T  24684836 gtttgtttaacatttgcaacattacacatgttaaaacaactaatagtagtaactttttttttggaaaacaacaattatttattcaaaagtt---ttatat 24684932  T
Q  102 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  24684933 ttaatattaaatgtacaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 24685006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 9759319 - 9759151
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  9759319 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 9759223  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||||||||||    
T  9759222 aatacaaaatgttcaacttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgtacatga 9759151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 19468194 - 19468361
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  19468194 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 19468290  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 173  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||    
T  19468291 taatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacat 19468361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 173
Target Start/End: Complemental strand, 19451076 - 19450911
Alignment:
Q  6 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatattta 104  Q
    |||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || |||||||    ||||||||    
T  19451076 ttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttt---tatattta 19450980  T
Q  105 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 173  Q
    |||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||    
T  19450979 atattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacat 19450911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 16667562 - 16667393
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| |||| |||| |||| |||| |||||| |||||||| |||   |||||    
T  16667562 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctac---atatt 16667466  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||||  |||| |  ||| | ||| ||| |||||| || |||||||||||| |||||||| ||||||    
T  16667465 taatataaaatacacaagtttcaagttaaaattatcattttaaacttcttaacatgtgcaaatttgcacatga 16667393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 50352303 - 50352464
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  50352303 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 50352399  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 168  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||||||    
T  50352400 aatacaaaatgttcaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttg 50352464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 17409824 - 17409993
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 101  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  17409824 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 17409919  T
Q  102 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||| |||||||||| |  |||| |||| || | ||||| || |||||| ||||| |||||||| ||||||    
T  17409920 ttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 17409993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 49181074 - 49181241
Alignment:
Q  6 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatattta 104  Q
    |||| ||| |||||||||||| || |||||||   |||||||| ||  ||| ||| ||||||||  |||| | |||| || ||||||||||   ||||||    
T  49181074 ttgtctaaaatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttaca---tattta 49181170  T
Q  105 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||| |||| |  |||| ||||||||| |||||||| ||||||||| || |||||||| ||||||    
T  49181171 atataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaggtgcaaatttgcacatga 49181241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 7349689 - 7349794
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||||| |||||||||| || |||||||  ||||||||| ||||||||||| ||||||||  |||| ||||||||| |||||||||   |||||    
T  7349689 gtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgtt-aaaagttac---atatt 7349784  T
Q  103 taatataaaa 112  Q
    ||||||||||    
T  7349785 taatataaaa 7349794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 10813658 - 10813587
Alignment:
Q  18 tgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaa 88  Q
    ||||||||| ||||||||||  ||||||||| ||||||||||||||||||||  |||| |||||||||||||    
T  10813658 tgcaatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattatttgttaaaa 10813587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 40049559 - 40049725
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || ||| ||||||| ||||  |||| ||||||   ||||| |||   |||||||    
T  40049559 gtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaagtttttatagaaaccaacaattatttaacaaaaaatta---tatattt 40049655  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 173  Q
    |||| |||||||  || |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||    
T  40049656 aataaaaaatgttaaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttgcacat 40049725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 8736988 - 8736828
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| ||||||||| |||| || | |||||| ||||||||||||   |||||    
T  8736988 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttac---atatt 8736892  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 167  Q
    |||||| ||||| || | |  ||| ||||| |||||| ||| || |||||||||||| |||||||    
T  8736891 taatatgaaatgcac-agttccaagtcaaagttaccactttaaatttcttaacatgtgcaaattt 8736828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 23545476 - 23545645
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||| ||||| ||| |||| |||| |||||| || |||||||    ||||||    
T  23545476 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaagtt---ttatatt 23545572  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| |||||||||| |  |||| |||| ||   ||||| || || ||||||||| |||||||| ||||||    
T  23545573 taatattaaatgtacaatttccaatacaaaatttatattttaaacttattaacatgtgcaaatttgcacatga 23545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 27019260 - 27019429
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||| ||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  27019260 gtttgtctaacgtgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 27019356  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || || ||||||| | |||||||| ||||||    
T  27019357 taatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatatgcaaatttgcacatga 27019429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 34941278 - 34941447
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||||||||| |||||| || || ||||   |||||||| ||| |||||||||||| |||| ||||  ||||| |||||||||||   ||||||    
T  34941278 gtttgtctaacatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagtta---tatatt 34941374  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
     |||| ||||||||||| |  |||| |||| |||| ||||| || |||||| ||||| |||||| | ||||||    
T  34941375 aaatacaaaatgtacaagttccaatgcaaaattactattttaaacttcttatcatgtgcaaattcgcacatga 34941447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 167
Target Start/End: Complemental strand, 37785001 - 37784877
Alignment:
Q  41 aactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttacca 139  Q
    |||||||| ||  ||||||||||||||||  || | | |||| |||||||||||||   ||||||| |||||||| ||||||  ||||  |||||||| |    
T  37785001 aactaaaagtagcaactttttattgaaaaacaataatcatttattaaaaagttaca---tatttaacataaaatgcacaaattacaatataaatttacta 37784905  T
Q  140 ttttgaaattcttaacatgttcaaattt 167  Q
    ||||||| |||||||||||| |||||||    
T  37784904 ttttgaacttcttaacatgtccaaattt 37784877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 6875501 - 6875608
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||| ||||||||| || |||||||||||||||||| || |||  ||||||| ||||||| || |||||| || ||||||||   || |||    
T  6875501 gtttgtctaacatttgcaatattgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatttattgaaaagtta---taaatt 6875597  T
Q  103 taatataaaat 113  Q
    |||||||||||    
T  6875598 taatataaaat 6875608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 25843291 - 25843406
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaag-ttacactatat 101  Q
    |||||| |||||||| |||||| | | |||||||| ||||||||| || |||||||||||||||||  ||||   ||||||||||||| |||   |||||    
T  25843291 gtttgtctaacatgtacaatataatacatgttaaagcaactaaaagtagtaactttttattgaaaaacaacaaccatttgttaaaaagctta---tatat 25843387  T
Q  102 ttaatataaaatgtacaaa 120  Q
    ||||||||||||| |||||    
T  25843388 ttaatataaaatgcacaaa 25843406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 27362406 - 27362560
Alignment:
Q  19 gcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtac 117  Q
    |||| ||| |||||||||| | | |||||| || ||| |||||||||||||  || | |||||| | |||||| ||||   |||||||||| ||||| ||    
T  27362406 gcaacattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctaca---tatttaatatgaaatgcac 27362502  T
Q  118 aaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  27362503 aaattccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 27362560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 52391298 - 52391459
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||| ||||| ||| || || ||||||||| |||||| | || ||||||||| |||||||  |||| |||||| || |||||||    ||||||    
T  52391298 gtttgtctaatatgtgtaatgttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttt---tatatt 52391394  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 167  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||    
T  52391395 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaattt 52391459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 54495815 - 54495646
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||| |||||||  || | |||||| |||||||| ||||   ||||    
T  54495815 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaagctaca---tatt 54495719  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||| |||| |  ||| | ||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  54495718 taatatgaaatgcacaagttccaagttaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 54495646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 10389445 - 10389380
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| ||||||||||||||||||| |||||| |  |||||||| || |||||||| ||||||||    
T  10389445 gtttgtctaacatgtgcaatattacacatgttatagtaactaaaagtattaacttttaattgaaaa 10389380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 33632379 - 33632267
Alignment:
Q  5 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatattt 103  Q
    ||||| |||||||||||| |||| | |||| ||||||||||| | || ||||||||| ||| |||| |||| |||||| || |||||||    |||||||    
T  33632379 tttgtctaacatgtgcaacattatacatgtaaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagtt---ttatattt 33632283  T
Q  104 aatataaaatgtacaa 119  Q
    ||||| ||||||||||    
T  33632282 aatattaaatgtacaa 33632267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 40681960 - 40682017
Alignment:
Q  15 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataa 72  Q
    |||||||||||| ||||||||||  ||||||||| || ||| ||||||||||||||||    
T  40681960 atgtgcaatattgcatatgttaagtcaactaaaaatagtaattttttattgaaaataa 40682017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 49228357 - 49228422
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || |||||||| ||||||||    
T  49228357 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaa 49228422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 1378075 - 1378178
Alignment:
Q  60 ttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 159  Q
    |||||||||| | || |||||| |||||| ||||   |||||||||||| |||||||||| |  |||   |||||||||||||| || ||||||||||||    
T  1378075 ttattgaaaacatcaattatttattaaaatgtta---tatatttaatattaaatgtacaagtttcaagataaatttaccattttaaatttcttaacatgt 1378171  T
Q  160 tcaaatt 166  Q
     ||||||    
T  1378172 gcaaatt 1378178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 19838866 - 19838756
Alignment:
Q  5 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattta 104  Q
    ||||| ||||||||| || ||| || |||||||||||||||| | |||||||||||| ||  ||| |||| |||||| || |||||||    ||||||||    
T  19838866 tttgtctaacatgtggaacattgcacatgttaaaacaactaatagtaataacttttt-ttttaaacaacaattatttattcaaaagtt---ttatattta 19838771  T
Q  105 atataaaatgtacaa 119  Q
    |||| ||||||||||    
T  19838770 atattaaatgtacaa 19838756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 39876844 - 39876991
Alignment:
Q  17 gtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgta 116  Q
    |||||||||| || |||||||   |||||||| || ||| ||||||||||||  |||| ||||||   |||||||||   ||||||| ||| |||||||     
T  39876844 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagtta---tatatttgatacaaaatgtt 39876940  T
Q  117 caaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 167  Q
    ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||    
T  39876941 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaattt 39876991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 45742368 - 45742431
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaa 67  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| |||||    
T  45742368 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtattaactttttcttgaa 45742431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 168
Target Start/End: Original strand, 55813920 - 55814026
Alignment:
Q  60 ttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatg 158  Q
    ||||||||||| |||| |||||| |||||||||||   ||||||||||| | |||||||||||  |||| |||| |||  ||||| || || ||||||||    
T  55813920 ttattgaaaatcaacaattatttattaaaaagtta---tatatttaatacagaatgtacaaatttcaatacaaaattattattttaaactttttaacatg 55814016  T
Q  159 ttcaaatttg 168  Q
    | ||||||||    
T  55814017 tgcaaatttg 55814026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 13009909 - 13009820
Alignment:
Q  28 catatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaatgtacaa 119  Q
    ||||||||||||||||||||| || ||| ||||||||||||| ||| | ||||||  ||||||| ||   ||||||||||| ||||| |||||    
T  13009909 catatgttaaaacaactaaaagtattaagtttttattgaaaactaataattatttactaaaaagcta---tatatttaatacaaaatatacaa 13009820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 47327070 - 47326901
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||| ||||||| ||| || ||||||| ||| |||||| || ||| |||| ||||||||  || | |||||| |||||||  ||||   ||||    
T  47327070 gtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactaca---tatt 47326974  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||| | || |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  47326973 taatatgaaatgcaaaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 47326901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 47341866 - 47341697
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||| ||||||| ||| || ||||||| ||| |||||| || ||| |||| ||||||||  || | |||||| |||||||  ||||   ||||    
T  47341866 gtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactaca---tatt 47341770  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||| | || |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  47341769 taatatgaaatgcaaaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 47341697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 49332333 - 49332423
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagtta 93  Q
    |||||| |||||||||||||||| || |||||||   || ||||| ||||||||||| |||| ||||||  | |||||| |||||||||||    
T  49332333 gtttgtctaacatgtgcaatatttcacatgttaaggtaattaaaagtaataacttttcattgaaaaatattaattatttattaaaaagtta 49332423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 10658621 - 10658544
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttattt 81  Q
    |||||| ||||||||||||||||||| |||||||   |||||||| ||  || ||||||||||||  |||| ||||||    
T  10658621 gtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattattt 10658544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 10872766 - 10872689
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttattt 81  Q
    |||||| ||||||||||||||||||| |||||||   |||||||| ||  || ||||||||||||  |||| ||||||    
T  10872766 gtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattattt 10872689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 51691343 - 51691502
Alignment:
Q  5 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatattt 103  Q
    ||||| ||| |||||||| ||| || |||||||| |||||||||| | ||| | ||||||||||| ||| | |||||| |||||||| ||   |||||||    
T  51691343 tttgtctaaaatgtgcaacattgcacatgttaaagcaactaaaat-agtaagtctttattgaaaactaataattatttattaaaaagcta---tatattt 51691438  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 167  Q
    |||  ||||| ||||| |  |||| |||| |||| ||||  || |||||||||||| |||||||    
T  51691439 aattcaaaatatacaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaattt 51691502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 3728249 - 3728317
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataac-tttttattgaaaata 71  Q
    |||||| |||||||| |||||||  | |||||| ||||||||||| || |||| |||||||||||||||    
T  3728249 gtttgtctaacatgtacaatattgaacatgttataacaactaaaagtagtaacttttttattgaaaata 3728317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 18882352 - 18882276
Alignment:
Q  99 tatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  18882352 tatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 18882276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 35645126 - 35645071
Alignment:
Q  57 tttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaatg 114  Q
    ||||||||||||| ||||| |||||| |||||||||||   ||||||||||||||||||    
T  35645126 tttttattgaaaaataacaattatttattaaaaagtta---tatatttaatataaaatg 35645071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 42750289 - 42750396
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || | |||||| ||||||||||||| |   |||    
T  42750289 gtttgtttaacatgtgcaatattgcatatgttaaagcaactaaaaataataactttttattgaaaacaataattatttattaaaaagttacaat---ttt 42750385  T
Q  104 aatataaaatg 114  Q
    |||||||||||    
T  42750386 aatataaaatg 42750396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 47457638 - 47457470
Alignment:
Q  5 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataa-ctttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    ||||| |||||||||||||||| || |||||||||||||||||| || |||  |||||||||||||||||| |||||| || ||||| |||||   || |    
T  47457638 tttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaataacaattatttatttaaaagctacac---atat 47457542  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||| | ||||  ||| ||||| |||| | ||| || || ||||||||| |||||||| ||||||    
T  47457541 aatataaaatgcataaattccaagtcaaagttactactttaaattttttaacatgtgcaaatttgcacatga 47457470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 19017925 - 19017845
Alignment:
Q  185 ttataccaacaataaaacatcatcaaataaaattatctaatgaacatgaacaaaacaagagcctatatatacacacaactt 265  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| | |||| ||||| |||||||  |||||||||||    
T  19017925 ttatactaacaataaaacatcatcaaataaaactatctaatgaacatcatcaaatcaagaacctatatcaacacacaactt 19017845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 175
Target Start/End: Original strand, 26300572 - 26300740
Alignment:
Q  3 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatt 102  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||| || ||| | | ||||||||| || |   | || |||||||||||   || |||    
T  26300572 tgtttgtctaacatgtgtaatattgcatatgttaaaacaactaaaagtattaattctgtattgaaaa-aaaaaaaaattattaaaaagtta---tacatt 26300667  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||| ||||| ||||| |  ||||||||| |||| ||||| || || ||||||||| |||||||||||||||    
T  26300668 taatacaaaatatacaagtttcaattcaaagttactattttaaactttttaacatgtgcaaatttgtacatga 26300740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 24463132 - 24462964
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| ||||||||| |||||| || |||||||  ||||||||| || ||| || |||||||||| ||||  ||||| |||||||  ||||   |||||    
T  24463132 gtttgtctaacatgtgaaatatttcacatgttaaggcaactaaaagtagtaatttcttattgaaaacaacaagtatttattaaaaaactaca---tattt 24463036  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||||||||||    || ||||| |||  ||||| || |||||||||||| |||||||| ||||||    
T  24463035 aatataaaatgtacaaactttaagtcaaagttattattttaaacttcttaacatgtgcaaatttgcacatga 24462964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 33342989 - 33343157
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  33342989 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 33343085  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  33343086 aatacaaaatgttcaagttccaatacaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 33343157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 7170005 - 7170171
Alignment:
Q  6 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 105  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  7170005 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 7170101  T
Q  106 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  7170102 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 7170171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 25709570 - 25709408
Alignment:
Q  11 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattga-aaataacagttatttgttaaaaagttacactatatttaatata 109  Q
    ||||||||| |||||| || |||||||| ||||||||| || ||| |||||||||| ||| |||| | |||| |||||||| |||    ||||||||||     
T  25709570 taacatgtgaaatattgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacc---tatttaatatg 25709474  T
Q  110 aaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||| |||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  25709473 aaatgaacaagttccaatacaaagttactattttaaacttcttaacatgtgcaaatttgcacatga 25709408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 46290011 - 46290179
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||| ||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  46290011 gtttgtctaacatgtgcaaaattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 46290107  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  46290108 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 46290179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 4969773 - 4969942
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || || |||||| ||| ||||  | | |||||| || |||||||    ||||||    
T  4969773 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtagctttttcttggaaaactataattatttatttaaaagttt---tatatt 4969869  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  4969870 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 4969942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 19889341 - 19889509
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  19889341 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 19889436  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  19889437 taatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 19889509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 19868114 - 19868221
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || ||||||| |||||||||| || ||| |||| |||| |||| | || |||||| | |||||||||   ||||||    
T  19868114 gtttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagtta---tatatt 19868210  T
Q  103 taatataaaat 113  Q
    |||||||||||    
T  19868211 taatataaaat 19868221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 34270266 - 34270430
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   ||||||||     || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  34270266 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaag----aagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 34270358  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  34270359 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 34270430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 9331962 - 9332130
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||| |||| ||| ||| | ||| |||||   |||||    
T  9331962 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaatta-ttgattaaatgttac---atatt 9332057  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  9332058 taatataaaaaacacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatga 9332130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 23982933 - 23982764
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||||||||||||||||| | |||||||  ||||||||| || |||||||| ||| ||||  |||| ||| || ||||||| |||    |||||    
T  23982933 gtttgtctaacatgtgcaatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaactta---aatatt 23982837  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||||  |||| |  ||| ||||| |||| | ||| || |||||||| ||| |||||||| ||||||    
T  23982836 taatataaaatacacaagttccaagtcaaagttactactttaaatttcttaacgtgtgcaaatttgcacatga 23982764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 33072072 - 33072150
Alignment:
Q  97 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||| ||||||| |||||  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  33072072 tatatttaatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtacaaatttgcacatga 33072150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 36548636 - 36548469
Alignment:
Q  5 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatattt 103  Q
    ||||| |||||||||||||||| || |||||||   |||||||| || ||| |||||||||||||  |||| |||||  ||||| | ||||   ||||||    
T  36548636 tttgtctaacatgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgattaaata-ttac---atattt 36548541  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||  |||||||   || ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  36548540 aatataaaaaatacaaattttaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatga 36548469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 47708065 - 47707911
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaacta---aaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactat 99  Q
    |||||| || ||| |||||| ||||| |||||||||||||||   ||| ||| ||  |||||| |||||  |||| |||||| |||||||||||   |||    
T  47708065 gtttgtctatcatatgcaatgttacacatgttaaaacaactactaaaagtaacaagattttatggaaaaacaacaattatttattaaaaagtta---tat 47707969  T
Q  100 atttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacat 157  Q
    |||||||| |||||||| || |  ||||||||| |||| ||||| || ||||||||||    
T  47707968 atttaatacaaaatgtataagtttcaattcaaaattactattttaaacttcttaacat 47707911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 3530264 - 3530177
Alignment:
Q  31 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaat 121  Q
    |||||||| ||| ||| | |||||| ||||||||||||| |||| |||||| ||||||| |||   ||||||| |||||||||| ||||||    
T  3530264 atgttaaagcaattaagaataataattttttattgaaaacaacaattatttattaaaaaatta---tatatttgatataaaatgcacaaat 3530177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 175
Target Start/End: Complemental strand, 8091463 - 8091321
Alignment:
Q  31 atgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattc 129  Q
    |||| ||| ||||||||| ||  || |||||||||||||| || | |||||| |||||||||||   ||||||||| | |||||||| || |  |||| |    
T  8091463 atgtcaaagcaactaaaagtagcaaatttttattgaaaatcaataattatttattaaaaagtta---tatatttaacacaaaatgtaaaagttacaatgc 8091367  T
Q  130 aaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||| |||| ||||| || ||||||||||||  ||||||| ||||||    
T  8091366 aaagttactattttaaacttcttaacatgtgtaaatttgcacatga 8091321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 26050516 - 26050470
Alignment:
Q  129 caaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||||||| || |||||||||||| |||||||| ||||||    
T  26050516 caaatttaccattttaaatttcttaacatgtgcaaatttgcacatga 26050470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 26059875 - 26059829
Alignment:
Q  129 caaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||||||| || |||||||||||| |||||||| ||||||    
T  26059875 caaatttaccattttaaatttcttaacatgtgcaaatttgcacatga 26059829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 29398221 - 29398143
Alignment:
Q  97 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  29398221 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgaacatga 29398143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 24250314 - 24250379
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  24250314 gtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaa 24250379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 29398292 - 29398227
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||| |||| ||||||||    
T  29398292 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaataatactaatttttcattgaaaa 29398227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 12650831 - 12650911
Alignment:
Q  14 catgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagtta 93  Q
    |||||||||||||  | |||||||  ||||||||| || |||||||| |||||||| || || |||||| |||||||||||    
T  12650831 catgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaaaagtta 12650911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 26682068 - 26682237
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataa-ctttttattgaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || |||||||||||||||||| || |||  ||||||||||||| |||| |||||| |||||||| |||||   |||    
T  26682068 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaacaacaattatttattaaaaagctacac---att 26682164  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||||| |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  26682165 taatataaaatgcacaagttccaagtcaaagttactactttaaatttcttaacatgtgcaaatttgcacatga 26682237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 6818017 - 6818186
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||||||||||||||||  ||||||||||  |||||||| || |||||||  |||| |||| |||| |||||| ||||||||||    |||| |    
T  6818017 gtttgtctaacatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt---ttatagt 6818113  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||||| |||| |  | || ||| ||||| ||||| || |||||||||||| |||||||| ||||||    
T  6818114 taatataaaatgcacaagttccgatacaattttactattttaaacttcttaacatgtacaaatttgcacatga 6818186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 31812113 - 31812282
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||||||||||| ||| | |||||| |||||||| ||||   ||||    
T  31812113 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctaca---tatt 31812209  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||| |||| |  ||| ||||| |||||||||| || ||||||| |||| |||||||| ||||||    
T  31812210 taatatgaaatgcacaagttccaagtcaaaattaccattttaaacttcttaatatgtgcaaatttgcacatga 31812282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 3306232 - 3306064
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||| ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  3306232 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 3306136  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
     ||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  3306135 gatacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 3306064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 20514632 - 20514802
Alignment:
Q  4 gtttgtttaacatgtgcaa-tattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatat 101  Q
    |||||| |||||||||||| |||| || ||| |||| ||||| ||| || ||| || |||||||||| || || |||||| |||||||||||   |||||    
T  20514632 gtttgtctaacatgtgcaaatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagtta---tatat 20514728  T
Q  102 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||||||||||| |  |||  |||| |||||||||| || |||||||| ||| ||||| || ||||||    
T  20514729 ttaatataaaatgtacaagttccaagacaaacttaccattttaaatttcttaacctgtgcaaatatgcacatga 20514802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 2161388 - 2161556
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  2161388 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 2161484  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||  ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  2161485 aattcaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 2161556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 7750668 - 7750733
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| || |||||||||||||||||| ||  ||||||||||||||||    
T  7750668 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagcaactttttattgaaaa 7750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 12131983 - 12132145
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaata-acagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || ||||||||  |||||||| ||  ||||||||||||||||   |||  ||||| |||||||||||   ||||||    
T  12131983 gtttgtctaacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagtta---tatatt 12132079  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 168  Q
    ||||||||||||| ||| |  |||| |||| |||| | ||| || |||||||||||| ||| ||||    
T  12132080 taatataaaatgttcaagttccaatacaaacttactactttaaatttcttaacatgtgcaagtttg 12132145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 9580287 - 9580118
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||| |||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||   | | ||||||    
T  9580287 gtttgtctaatatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaa---aaattatatt 9580191  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || ||||||||||||  ||||||| ||||||    
T  9580190 taatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgtaaatttgcacatga 9580118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 14816303 - 14816198
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||||||||||||  |||| ||| || ||||||| ||||   |||||    
T  14816303 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttac---atatt 14816207  T
Q  103 taatataaa 111  Q
    |||||||||    
T  14816206 taatataaa 14816198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 14829437 - 14829542
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||||||||||||  |||| ||| || ||||||| ||||   |||||    
T  14829437 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttac---atatt 14829533  T
Q  103 taatataaa 111  Q
    |||||||||    
T  14829534 taatataaa 14829542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 38843704 - 38843817
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  38843704 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 38843800  T
Q  103 taatataaaatgtacaa 119  Q
    |||||| ||||||||||    
T  38843801 taatattaaatgtacaa 38843817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 11923015 - 11923080
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| || | |||||||||||| ||| | ||||||||||||||||||    
T  11923015 gtttgtctaacatgtgcaatattgcacaagttaaaacaactgaaaatgataactttttattgaaaa 11923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 38527821 - 38527886
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| ||||||||||| ||||||||    
T  38527821 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaa 38527886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 39024998 - 39024866
Alignment:
Q  40 caactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttacca 139  Q
    ||||||||| |||||||||||||||||||  |||| ||| || |||||||  ||||   || ||||||||||||| ||||||  ||| ||||| |||| |    
T  39024998 caactaaaagtaataactttttattgaaaccaacaattaattattaaaaatctaca---tagttaatataaaatgcacaaattccaagtcaaagttacta 39024902  T
Q  140 ttttgaaattcttaacatgttcaaatttgtacatga 175  Q
     ||| || |||||| ||||| |||||||| ||||||    
T  39024901 ctttaaacttcttatcatgtgcaaatttgcacatga 39024866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 12189766 - 12189597
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 101  Q
    ||||||||||||||||||  ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  12189766 gtttgtttaacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 12189671  T
Q  102 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||| |||||||||| |  ||||  ||| || | ||||| || |||||| ||||| |||||||| ||||||    
T  12189670 ttaatattaaatgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 12189597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 12434194 - 12434025
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 101  Q
    ||||||||||||||||||  ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  12434194 gtttgtttaacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 12434099  T
Q  102 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||| |||||||||| |  ||||  ||| || | ||||| || |||||| ||||| |||||||| ||||||    
T  12434098 ttaatattaaatgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 12434025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 34741813 - 34741730
Alignment:
Q  33 gttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaa 119  Q
    |||||||||||||||| ||| ||||||| |||||||| || | |||||| ||||||| |||   |||||||||||||||||| ||||    
T  34741813 gttaaaacaactaaaaataacaacttttaattgaaaacaataattatttattaaaaaatta---tatatttaatataaaatgcacaa 34741730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 8284747 - 8284660
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaag 90  Q
    |||||| ||||||||||| |||| || |||||||| ||||||||| || ||||||||||||  |||| |||| |||||| ||||||||    
T  8284747 gtttgtctaacatgtgcagtattgcacatgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaag 8284660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 168
Target Start/End: Original strand, 45005970 - 45006131
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  45005970 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 45006066  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 168  Q
    |||||| | |||||||  |  |||| |||| || | ||||| || |||||||||||| ||||||||    
T  45006067 taatattagatgtacatgttccaatacaaaatt-ctattttaaacttcttaacatgtgcaaatttg 45006131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 5298077 - 5298157
Alignment:
Q  12 aacatgtgcaatattacatatgttaaaacaactaaaattaataa---ctttttattgaaaataacagttatttgttaaaaa 89  Q
    |||||||||||||||||| |||||||||| ||||||| ||| ||    ||||||||||||| |||| |||||| |||||||    
T  5298077 aacatgtgcaatattacacatgttaaaactactaaaactaacaaattttttttattgaaaacaacaattatttattaaaaa 5298157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 13328118 - 13327950
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | ||| |||||   |||||    
T  13328118 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaatgttac---atatt 13328023  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  13328022 taatataaaaaacacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatga 13327950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 35678452 - 35678347
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||| ||||||||  |||| ||| || ||||||| ||||   |||||    
T  35678452 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttac---atatt 35678356  T
Q  103 taatataaa 111  Q
    |||||||||    
T  35678355 taatataaa 35678347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 36967248 - 36967079
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| |||  | ||||||| |||||||| | || ||||||||| ||| |||| |||| |||| | || |||||||    ||||||    
T  36967248 gtttgtctaacatgtgcaacattgtacatgttaagacaactaatagtagtaactttttcttggaaaacaacaattatatattcaaaagttt---tatatt 36967152  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| |||||| ||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  36967151 taatattaaatgtgcaagtttcaatacaaagtttctattttaaacttcttaacatgtgcaaatttgcacatga 36967079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 7140636 - 7140571
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||||||||||||    
T  7140636 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaa 7140571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 9824959 - 9825024
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||| |||||||||  |||||||||  ||| |||||||| |||||||||||||||||    
T  9824959 gtttgtctaacatatgcaatattgtatatgttaatgcaattaaaattagtaactttttattgaaaa 9825024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 16445893 - 16445801
Alignment:
Q  24 attacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtaca 118  Q
    ||||||||||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    |||||||||||| |||||||||    
T  16445893 attacatatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatttaatattaaatgtaca 16445801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 40210998 - 40210933
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || |||||||| ||||||||    
T  40210998 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaa 40210933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 11947076 - 11947016
Alignment:
Q  5 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg 65  Q
    ||||| |||||||| ||||||| || | |||||||||||||||| | ||||||||||||||    
T  11947076 tttgtctaacatgtacaatattgcacaagttaaaacaactaaaaatgataactttttattg 11947016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 9743862 - 9743967
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||||||||||||||||    ||||||| |||||||||| || ||| |||||||||||||  |||| |||||| || |||||||||   |||||    
T  9743862 gtttgtctaacatgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttac---atatt 9743957  T
Q  103 taatataaaa 112  Q
    ||||||||||    
T  9743958 taatataaaa 9743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 10974725 - 10974619
Alignment:
Q  11 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatata 109  Q
    |||||| |||| ||||  |||||||||| ||||||||| || |||| ||||||||||||  || |  ||||| ||||||| |||||   |||||||||||    
T  10974725 taacatatgcactattgtatatgttaaagcaactaaaagtagtaacattttattgaaaaacaataactatttattaaaaaattaca---tatttaatata 10974629  T
Q  110 aaatgtacaa 119  Q
    ||||||||||    
T  10974628 aaatgtacaa 10974619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 28015032 - 28014867
Alignment:
Q  6 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 105  Q
    |||| ||||||||||||| ||||| | ||||||| |||| |    | ||||||||| || |||| |||| |||||| || |||||||    |||||||||    
T  28015032 ttgtctaacatgtgcaatgttacacaagttaaaataacttattgcagtaactttttttt-aaaacaacaattatttattcaaaagttt---tatatttaa 28014937  T
Q  106 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  28014936 tattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 28014867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 2083156 - 2083078
Alignment:
Q  97 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||||||||||| ||||||  |||| |||||||   |||||||| ||||||| ||||  ||||||| ||||||    
T  2083156 tatatttaatataaaatgaacaaatttcaatacaaatttgttattttgaacttcttaagatgtgtaaatttgcacatga 2083078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 11117175 - 11117129
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaatt 50  Q
    |||||| |||||||||||||||| || |||||||| |||||||||||    
T  11117175 gtttgtctaacatgtgcaatattgcacatgttaaagcaactaaaatt 11117129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 26834561 - 26834730
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||| ||||| ||| || ||| ||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||    
T  26834561 gtttgtctaacatatgcaacattgcacatgctaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tatt 26834657  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||| |||| |  ||| ||||| |||||||||| || ||||||| || | |||||||| ||||||    
T  26834658 taatatgaaatgcacaagttccaagtcaaaattaccattttaaatttcttaatatatgcaaatttgcacatga 26834730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 32186186 - 32186295
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||||||||||| |||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||| | || |||||||    ||||||    
T  32186186 gtttgtttaacatgagcaacattgcaaatgttaaaacaactaatagtagtaactttttcttagaaaacaacatttatatattcaaaagtt---ttatatt 32186282  T
Q  103 taatataaaatgt 115  Q
    |||||| ||||||    
T  32186283 taatattaaatgt 32186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 37523756 - 37523806
Alignment:
Q  2 ttgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaa 52  Q
    |||||||| |||||||| ||||||| || ||||||||||| ||||||||||    
T  37523756 ttgtttgtctaacatgtacaatattgcacatgttaaaacagctaaaattaa 37523806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 38213123 - 38213081
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaa 46  Q
    ||||||||||||||||||| ||| || ||||||||||||||||    
T  38213123 gtttgtttaacatgtgcaacattgcacatgttaaaacaactaa 38213081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 44091346 - 44091404
Alignment:
Q  31 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 89  Q
    ||||||||||||| |||| || ||| ||||||||||||| |||| |||||| |||||||    
T  44091346 atgttaaaacaacgaaaagtattaattttttattgaaaacaacaattatttattaaaaa 44091404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 10129104 - 10129169
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| || |||||||   ||||||||||| ||| |||| ||||||||    
T  10129104 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaa 10129169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 12346006 - 12346071
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| | |||||||||| |||||| |||||||||||| ||| | || ||||||||| |||||||    
T  12346006 gtttgtctgacatgtgcaacattacacatgttaaaacaattaatagtagtaactttttcttgaaaa 12346071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 45516316 - 45516373
Alignment:
Q  31 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaa 88  Q
    ||||||| | |||||||| || |||||||||||||||| ||||| |||||| ||||||    
T  45516316 atgttaagataactaaaagtagtaactttttattgaaactaacaattatttattaaaa 45516373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 1844731 - 1844572
Alignment:
Q  12 aacatgtgcaatattacatatgttaaaacaactaaaattaataactt-tttattgaaaa-taacagttatttgttaaaaagttacactatatttaatata 109  Q
    ||||||| ||||||| || | ||| |||||||||||| ||  || || |||||| |||| ||||| |||||| ||||||||||| |   |||||||||||    
T  1844731 aacatgtacaatattgcacacgttgaaacaactaaaagtagaaatttctttattaaaaagtaacaattatttattaaaaagttaaa---tatttaatata 1844635  T
Q  110 aaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtaca 172  Q
    ||||  | ||||  | || ||||||||  |||||||| ||||||||||||  ||| |||||||    
T  1844634 aaatacataaatttcgatacaaatttattattttgaatttcttaacatgtgtaaacttgtaca 1844572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 35583368 - 35583453
Alignment:
Q  6 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttt---tattgaaaataacagttatttgttaaaaa 89  Q
    |||| |||||||| ||||||| || |||||||||||  |||||| || |||||||   ||||||||| |||| ||||||||||||||    
T  35583368 ttgtctaacatgtacaatattgcacatgttaaaacatttaaaat-aacaacttttatttattgaaaacaacaattatttgttaaaaa 35583453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 40568314 - 40568378
Alignment:
Q  5 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    ||||| |||||  ||||||||| || |||||||||||||||||| |  |||||||||||| ||||    
T  40568314 tttgtctaacacatgcaatatttcacatgttaaaacaactaaaagttgtaactttttattaaaaa 40568378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 15411800 - 15411632
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || ||| ||||||||| |||| |||| | |||| |||||||| |||   |||||    
T  15411800 gtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctac---atatt 15411704  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatg 174  Q
    |||||||||||| |||| |  |||  |||| |||| ||||| || |||||||||||| |||||||| |||||    
T  15411703 taatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaatttgcacatg 15411632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 9747317 - 9747486
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||| |||| ||||||||  |||||||| || ||||| ||||||| |||| ||||  ||||||| |||||| |||   |||||    
T  9747317 gtttgtctaacatgtgcaatagtacacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctac---atatt 9747413  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||||| |||| |  |||  |||| |||| ||||| || ||||||||||||  ||||||| ||||||    
T  9747414 taatataaaatgaacaagttccaagacaaaattactattttaaacttcttaacatgtgaaaatttgcacatga 9747486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 5583735 - 5583574
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  5583735 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 5583639  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 168  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||||||    
T  5583638 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttg 5583574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 14377425 - 14377593
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||||| |||||||||| || |||||||  ||||||||| || |||||||||||||||||  |||| ||||||||| |||||||||   |||||    
T  14377425 gtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgtt-aaaagttac---atatt 14377520  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  14377521 taatataaaaaacacaagtttcaagtcaaagttactactttaaacttcttatcatgtacaaatttgcacatga 14377593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 12438825 - 12438740
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 89  Q
    |||||| |||||||||||||||| |||||||| | |||||||||| ||||||||||| ||| |||  |||| |||||| |||||||    
T  12438825 gtttgtataacatgtgcaatattgcatatgttcagacaactaaaaataataacttttcattaaaaccaacaattatttattaaaaa 12438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 45062207 - 45062367
Alignment:
Q  13 acatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatataaa 111  Q
    |||||| |||||||| |||||||||||||| ||||| |  ||||||||||||  |||| || | |||||| ||||||||||||   || |||||||||||    
T  45062207 acatgtacaatattaaatatgttaaaacaattaaaagtggtaactttttattaaaaaacaaaaattatttattaaaaagttac---atgtttaatataaa 45062303  T
Q  112 atgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||| |||| |  |||   ||| |||| |||||||| ||||||| |||| |||||||| ||||||    
T  45062304 atgcacaagttccaaaataaagttactattttgaacttcttaatatgtgcaaatttgcacatga 45062367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 23932565 - 23932734
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||  |||| |||| |||| |||||| ||||||||||    |||| |    
T  23932565 gtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt---ttatagt 23932661  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||||| |||| |  | || ||| ||||| ||||| || ||||||| || | |||||||| ||||||    
T  23932662 taatataaaatgcacaagttccgatacaattttactattttaaacttcttaatatatgcaaatttgcacatga 23932734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 27665221 - 27665053
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  27665221 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 27665126  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  27665125 taatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 27665053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 43806360 - 43806521
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||| ||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  43806360 gtttgtctaacatgtgcaacattgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 43806456  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 167  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || || ||||||||| |||||||    
T  43806457 taatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatgtgcaaattt 43806521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 175
Target Start/End: Complemental strand, 24729718 - 24729586
Alignment:
Q  41 aactaaaattaataactttttattgaaaataac-agttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttacca 139  Q
    |||||||| || ||| ||||||||||||||||  | |||||| |||||||||||   | || |||||| ||||| |||||||  |||| |||| |||| |    
T  24729718 aactaaaaatagtaaatttttattgaaaataaataattatttattaaaaagtta---tgtaattaatacaaaatatacaaattccaatgcaaagttacta 24729622  T
Q  140 ttttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| || |||||||||||| |||||||| ||||||    
T  24729621 ttttaaatttcttaacatgtgcaaatttgcacatga 24729586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 34214129 - 34213965
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||||||||  |||| | || |||||||| ||||||||| || ||| |||||||||||||  |||| ||||||  |||||||||| | ||| ||    
T  34214129 gtttgtctaacatgtataatactgcacatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattattttataaaaagttata-tatttt 34214031  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 168  Q
    ||||| ||||||| ||| |  ||||  ||| |||| ||||| || |||||||||||| ||||||||    
T  34214030 taataaaaaatgttcaagttccaatgaaaaattactattttaaatttcttaacatgtgcaaatttg 34213965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 34817544 - 34817649
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||| ||||||||| ||  | |||||| |||||||| ||  |||| ||||||||||| |||| |||||| |||||||||||   |||||||    
T  34817544 gtttgtctaacatatgcaatattgcacgtattaaaataactaaaaatatcaactatttattgaaaacaacaattatttattaaaaagtta---tatattt 34817640  T
Q  104 aatataaaa 112  Q
    |||| ||||    
T  34817641 aataaaaaa 34817649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 39367059 - 39367149
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagtta 93  Q
    |||||| |||||||| ||  ||||| ||||||||| ||||||||||||| ||  ||||||||||||| || | |||||| |||||||||||    
T  39367059 gtttgtctaacatgtacaccattacgtatgttaaagcaactaaaattaacaaaattttattgaaaatcaataattatttattaaaaagtta 39367149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 7757963 - 7757795
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||| |||  | |||||||   |||||||| ||| || |||||||| |||  |||| ||||||   |||||||||   |||||||    
T  7757963 gtttgtctaacatgtgcaaaattgtacatgttaaggtaactaaaagtaacaagtttttattaaaaccaacaattatttaacaaaaagtta---tatattt 7757867  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || ||||||||||||  ||||||| ||||||    
T  7757866 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgtaaatttgcacatga 7757795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 12016667 - 12016732
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||||||||||||    
T  12016667 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaa 12016732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 159
Target Start/End: Complemental strand, 2580082 - 2579983
Alignment:
Q  57 tttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaaca 156  Q
    |||||||| ||||||||| |||||||||||||| ||   | |||||||| ||||||| ||||||   |||| |||| |||| | |||||| |||||||||    
T  2580082 tttttattaaaaataacaattatttgttaaaaaatt---caatatttaacataaaatatacaaaattcaatacaaacttactagtttgaacttcttaaca 2579986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 7720116 - 7720180
Alignment:
Q  5 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    ||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| |||||||    
T  7720116 tttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttgaaaa 7720180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 26003431 - 26003355
Alignment:
Q  99 tatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||| ||||||||||||  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  26003431 tatttaatatcaaatgtacaaatttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 26003355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 2051639 - 2051721
Alignment:
Q  29 atatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatttaatataaaat 113  Q
    |||||||||||||||||||||||  || ||||||||| |||| |||| |||||| ||||||| |||    ||||||||||||||||    
T  2051639 atatgttaaaacaactaaaattagcaagtttttattgaaaaacaacaattatttattaaaaattta---aatatttaatataaaat 2051721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 43388944 - 43388857
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaag 90  Q
    |||||| ||| |||||||||||| || || ||||| ||||||||| ||  || |||||||||||||| |||| |||||| ||||||||    
T  43388944 gtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaaag 43388857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 19228426 - 19228594
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | |||||||||   |||||    
T  19228426 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaaagttac---atatt 19228521  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||| ||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  19228522 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatga 19228594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 36612909 - 36612796
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| |  ||||||||| |||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  36612909 gtttgtctaacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagtt---ttatatt 36612813  T
Q  103 taatataaaatgtacaa 119  Q
    |||||| ||||||||||    
T  36612812 taatattaaatgtacaa 36612796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 36620760 - 36620647
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| |  ||||||||| |||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  36620760 gtttgtctaacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagtt---ttatatt 36620664  T
Q  103 taatataaaatgtacaa 119  Q
    |||||| ||||||||||    
T  36620663 taatattaaatgtacaa 36620647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 36909553 - 36909503
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaata 54  Q
    |||||| |||||| |||||||||||| |||||||||||| ||||| |||||    
T  36909553 gtttgtctaacatatgcaatattacacatgttaaaacaattaaaagtaata 36909503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 39904225 - 39904159
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 70  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| |||||||||    
T  39904225 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaat 39904159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 4579966 - 4579901
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| ||||||||||||||||||| |||||||   |||||||  || |||||||| ||||||||    
T  4579966 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatatagtaacttttcattgaaaa 4579901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 16754971 - 16755028
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 61  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || |||||||||    
T  16754971 gtttgtctaacatgtgcaacattgcaaatgttaaaacaactaatagtagtaacttttt 16755028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 16919331 - 16919266
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||||||||| |||||||    
T  16919331 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 16919266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 22705455 - 22705520
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  22705455 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 22705520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 26003669 - 26003612
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 61  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || |||||||||    
T  26003669 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttt 26003612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 25998172 - 25998088
Alignment:
Q  12 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttaca 95  Q
    |||||||||| |||| || ||||||||  |||||||| | | |||||||||||| |||| |||| |||||| |||||||| ||||    
T  25998172 aacatgtgcattattgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaaaagataca 25998088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 26230030 - 26229864
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||| |||||||| |||  |||| ||| ||| | |||||||||   ||||||    
T  26230030 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaattttttattaaaaccaacaatta-ttgattaaaagttac---atattt 26229935  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatg 174  Q
    |||||||||  || ||||   || ||||| |||| ||||| || |||||||| ||  |||||||| |||||    
T  26229934 aatataaaaaatataaattttaagtcaaagttactattttaaacttcttaacctggacaaatttgcacatg 26229864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 6016856 - 6017025
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || ||| ||| ||| |||||| || |||||||| ||||||||  |||| |||||| |||||||||||   ||||||    
T  6016856 gtttgtctaacatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagtta---tatatt 6016952  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || || ||||||||| |||||||| ||||||    
T  6016953 taatatgaaatgcacaagttccaagtcaaagttaccactttaaactttttaacatgtgcaaatttgcacatga 6017025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 30623326 - 30623477
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| |||||| |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || |||||||    ||||||    
T  30623326 gtttgtctaacatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagtt---ttatatt 30623422  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacat 157  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || ||||||||||    
T  30623423 taatatcaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacat 30623477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 8977644 - 8977483
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  ||| ||| ||||||||  |||| | |||| || ||||||||||   ||||    
T  8977644 gtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttaca---tatt 8977548  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 167  Q
    |||||||||||| |||| |  |||| ||||||||| |||||||| ||||||||| || |||||||    
T  8977547 taatataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaagtgcaaattt 8977483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 34692354 - 34692523
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| ||||  | | |||||| || |||||||    ||||||    
T  34692354 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttt---tatatt 34692450  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  34692451 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 34692523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 14228303 - 14228135
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   || ||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  14228303 gtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 14228207  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  14228206 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 14228135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 28943946 - 28943778
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   || ||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  28943946 gtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 28943850  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  28943849 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 28943778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 29730295 - 29730383
Alignment:
Q  21 aatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatttaatataaa 111  Q
    |||||| ||||||||||| | | |||||||||||| ||||||||| |||| ||||||||||| |||||||||||   |||||||||||||||    
T  29730295 aatattgcatatgttaaagctattaaaattaataagtttttattgaaaaacaacagttatttattaaaaagtta---tatatttaatataaa 29730383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 10887031 - 10887198
Alignment:
Q  6 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatattta 104  Q
    |||| |||||||||||| ||| || ||||||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||||    
T  10887031 ttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tattta 10887127  T
Q  105 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||  |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  10887128 atataaaatacacaagttccaaatcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 10887198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 33017725 - 33017891
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||||||  || |||||||| |||  |||| ||||||   |||||||||   |||||||    
T  33017725 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagcaagtttttattaaaaccaacaattatttaacaaaaagtta---tatattt 33017821  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 173  Q
    |||| ||||||| ||| |  | || |||| |||| ||||| || || ||||||||| |||||||| ||||    
T  33017822 aatacaaaatgttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaatttgcacat 33017891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 1017956 - 1017803
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||| | || ||| | ||| |||||||| || ||||||||  |||||||  |||| |||||| ||||||| |||||   ||||    
T  1017956 gtttgtctaacatgtgcaatactgcacatgattaaataactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttaca---tatt 1017860  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 159  Q
    |||||||||||| |||| |  ||| ||||| |||| | ||| || ||||||||||||    
T  1017859 taatataaaatgcacaactttcaagtcaaagttactactttaaacttcttaacatgt 1017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 29863480 - 29863311
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||  |||| |||| || | |||||| ||||||||||    |||| |    
T  29863480 gtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaaagtt---ttatagt 29863384  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||||| | || |  | |  ||| ||||| ||||| || |||||||||||| |||||||| ||||||    
T  29863383 taatataaaatgcaaaagttccgacacaattttactattttaaacttcttaacatgtgcaaatttgcacatga 29863311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 1814959 - 1814894
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| || |||||||| ||||||||| ||| |  |||||||||||||    
T  1814959 gtttgtctaacatgtgcaatattgcacatgttaaagcaactaaaagtaacatatttttattgaaaa 1814894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 3485776 - 3485711
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||| || ||||||||||||||||||  |||||||||||  | ||||||||||||||    
T  3485776 gtttgtctaacatatgtaatattacatatgttaaaggaactaaaattagcacctttttattgaaaa 3485711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 17552764 - 17552596
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||| ||||  |||| ||||||   ||||| |||   |||||||    
T  17552764 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatcgaaaccaacaattatttaacaaaaaatta---tatattt 17552668  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| || | |||| ||||| || |||||||||||| |||||||| ||||||    
T  17552667 aatacaaaatgttcaagttccaatgcataattactattttaaatttcttaacatgtgcaaatttgcacatga 17552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 24979327 - 24979262
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| |||||||    
T  24979327 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaataatagtaactttttcttgaaaa 24979262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 17596315 - 17596370
Alignment:
Q  6 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 61  Q
    |||| |||||||||||||||| || ||||||| |||||||||| || |||||||||    
T  17596315 ttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaacttttt 17596370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 18332866 - 18332697
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||||||| |||| || | |||||| |||||||| ||   ||||||    
T  18332866 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagcta---tatatt 18332770  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||| | || |  ||| ||||| ||| || ||| || ||||||||||||  ||||||| ||||||    
T  18332769 taatatgaaatgcataagttccaagtcaaaattatcactttaaacttcttaacatgtgaaaatttgcacatga 18332697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 5363070 - 5363005
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  5363070 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 5363005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 30839782 - 30839950
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  30839782 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 30839878  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  30839879 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 30839950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 36597580 - 36597748
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  36597580 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagtta---tatattt 36597676  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  36597677 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 36597748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 8103755 - 8103589
Alignment:
Q  6 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 105  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  8103755 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 8103659  T
Q  106 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  8103658 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 8103589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 18841883 - 18841721
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  18841883 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagtt---ttatatt 18841787  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 168  Q
    |||||| ||||||||||||  |||| |||| || | ||||| || || ||||||| | ||||||||    
T  18841786 taatattaaatgtacaaatttcaatacaaaatttctattttaaactttttaacatatgcaaatttg 18841721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 3398220 - 3398389
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| ||||  | | |||||| || |||||||    ||||||    
T  3398220 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttt---tatatt 3398316  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  3398317 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 3398389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 40512952 - 40513120
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   ||||| || || ||| ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  40512952 gtttgtctaacatgtgcaatattgcacatgttaaggtaactagaagtagtaagtttttattgaaatcaacaattatttaacaaaaagtta---tatattt 40513048  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
     ||| ||||| | |||||  |||| |||| |||| ||||| || || ||||||||| |||||||||||||||    
T  40513049 gatacaaaatattcaaattccaatgcaaagttactattttaaattttttaacatgtgcaaatttgtacatga 40513120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 5958301 - 5958196
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||||||||||||||||||| ||||||||  |||||||| || ||| |||| ||||||||| |||| ||| || ||||||| ||||   |||||    
T  5958301 gtttgtctaacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaattaattattaaaaatttac---atatt 5958205  T
Q  103 taatataaa 111  Q
    |||||||||    
T  5958204 taatataaa 5958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 11636732 - 11636900
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||| ||||||||  |||| ||| || ||||||| ||||   |||||    
T  11636732 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttac---atatt 11636828  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  11636829 taatat-aaatgcacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 11636900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 15241065 - 15240959
Alignment:
Q  66 aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 165  Q
    |||| |||| |||||| ||||||| |||   |||||||||||||| ||| ||||||  |||| ||||||||  |||||||| || ||||||||| |||||    
T  15241065 aaaacaacaattatttattaaaaaatta---tatatttaatataacatgcacaaatttcaatacaaatttaatattttgaactttttaacatgtacaaat 15240969  T
Q  166 ttgtacatga 175  Q
    ||| ||||||    
T  15240968 ttgcacatga 15240959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 10665134 - 10665053
Alignment:
Q  12 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagtta 93  Q
    |||||||| |||||| || |||||||   |||||||| ||||||||||| ||||||||||  | |||||| |||||||||||    
T  10665134 aacatgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaatattaattatttattaaaaagtta 10665053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 11360186 - 11360243
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 61  Q
    |||| |||||||||| |||||||||| |||||||||||||||||| || ||| |||||    
T  11360186 gtttatttaacatgttcaatattacacatgttaaaacaactaaaagtagtaatttttt 11360243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 20058109 - 20058150
Alignment:
Q  200 aacatcatcaaataaaattatctaatgaacatgaacaaaaca 241  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  20058109 aacatcatcaaataaaattatctaatgaacatcatcaaaaca 20058150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 11250134 - 11250090
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 48  Q
    ||||||||||||||||||||||| || |||||||| |||||||||    
T  11250134 gtttgtttaacatgtgcaatattgcacatgttaaagcaactaaaa 11250090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 28629890 - 28629984
Alignment:
Q  15 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaa 112  Q
    |||| ||||||| || |||||||| ||||||||| ||||||||||| ||||||||  |||| |||||| || |||||||||   |||||||||||||||    
T  28629890 atgtacaatattgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattatttatt-aaaagttac---atatttaatataaaa 28629984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 33072677 - 33072721
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 48  Q
    ||||||||||||||||||||||| || |||||||| |||||||||    
T  33072677 gtttgtttaacatgtgcaatattgcacatgttaaatcaactaaaa 33072721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 2795524 - 2795692
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | |||||||||   |||||    
T  2795524 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaaagttac---atatt 2795619  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||| ||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  2795620 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatga 2795692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 11375972 - 11376026
Alignment:
Q  16 tgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 70  Q
    ||||||||||| || |||||||| ||||||||| || |||||||| |||||||||    
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaat 11376026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 15820317 - 15820379
Alignment:
Q  97 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 159  Q
    ||||||||||| ||||||| |||||  |||| ||||||||| |||||||| ||||| ||||||    
T  15820317 tatatttaatagaaaatgttcaaatttcaatacaaatttactattttgaatttcttgacatgt 15820379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 23995516 - 23995427
Alignment:
Q  83 ttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 173  Q
    ||||||||||| | ||||||||||| ||||||||||| |  ||||  ||| |||| ||||| || |||||||||||| |||||||| ||||    
T  23995516 ttaaaaagttata-tatatttaatacaaaatgtacaagtttcaatataaaattactattttaaacttcttaacatgtacaaatttgcacat 23995427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 31567577 - 31567507
Alignment:
Q  98 atatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 168  Q
    ||||||||||||||||| ||||||  |||  |||| |||||||||| || || ||||||||| ||||||||    
T  31567577 atatttaatataaaatgaacaaatttcaagacaaaattaccattttaaattttttaacatgtgcaaatttg 31567507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 34578012 - 34578078
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 70  Q
    |||||| |||||||||||||||| || |||||||   |||||||| |||||| |||| |||||||||    
T  34578012 gtttgtctaacatgtgcaatattccacatgttaaggtaactaaaagtaataatttttcattgaaaat 34578078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 40309580 - 40309497
Alignment:
Q  31 atgttaaaacaactaaaattaataactttttattg---aaaataacagttatttgttaaaaagttacactatatttaatataaaatg 114  Q
    |||||||||||||||||| ||| ||  ||||||||   ||||||||| | |||| |||||||||||   ||||||||||||||||||    
T  40309580 atgttaaaacaactaaaagtaacaatattttattgaaaaaaataacaataatttattaaaaagtta---tatatttaatataaaatg 40309497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 24014865 - 24014800
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| |||||||||||| ||| || |||||||||||||||||| ||  || |||||||| ||||    
T  24014865 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaaaagtataaagtttttattcaaaa 24014800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 6863610 - 6863725
Alignment:
Q  57 tttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaaca 156  Q
    ||||||||||||  |||| ||||||  ||||||||||   ||||||||||| ||||||| ||| |  ||||  ||| |||| ||||| || || ||||||    
T  6863610 tttttattgaaaccaacaattatttaataaaaagtta---tatatttaatacaaaatgttcaagttccaatataaagttactattttaaattttttaaca 6863706  T
Q  157 tgttcaaatttgtacatga 175  Q
    ||| |||||||| ||||||    
T  6863707 tgtgcaaatttgcacatga 6863725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 7162934 - 7163010
Alignment:
Q  99 tatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||||||||||||| |||| |  ||||||||| |||| ||||| |||||||||| |  | || ||||||||||||    
T  7162934 tatttaatataaaatgaacaagtttcaattcaaacttactattttaaaattcttaaaaaatacatatttgtacatga 7163010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 224
Target Start/End: Original strand, 24015674 - 24015706
Alignment:
Q  192 aacaataaaacatcatcaaataaaattatctaa 224  Q
    ||||||||||||||||||||||||| |||||||    
T  24015674 aacaataaaacatcatcaaataaaactatctaa 24015706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 2571269 - 2571437
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  2571269 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 2571365  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  2571366 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 2571437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 10307767 - 10307935
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || ||| |||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  10307767 gtttgtctaacatgtgcaatattgcacatgataaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagtta---tatattt 10307863  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||| ||||||| ||| |  |||| ||||||||| ||||| || |||||||||||| |||||||| ||||||    
T  10307864 aatacaaaatgttcaagttccaatgcaaatttactattttaaatttcttaacatgtgcaaatttgcacatga 10307935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 54527884 - 54527717
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  54527884 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 54527788  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 173  Q
    |||||| |||||||||| |  |||| |||| ||   ||||| || |||||||||||| |||||||| ||||    
T  54527787 taatattaaatgtacaagttccaatacaaaatttatattttaaatttcttaacatgtgcaaatttgcacat 54527717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 38389447 - 38389616
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||    
T  38389447 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tatt 38389543  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  38389544 taatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 38389616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 50204403 - 50204572
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||| ||||| || |||||||||| |||| | || |||||||    ||||||    
T  50204403 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttggaaaataacaattatatattcaaaagtt---ttatatt 50204499  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| |||||||||  |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  50204500 taatattaaatgtacaggttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 50204572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 20938056 - 20938162
Alignment:
Q  3 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatat 101  Q
    ||||||| |||||||||||||||| || |||||||   |||||||| |||||||||||||||||||| ||||| |||||  ||||||| ||||   ||||    
T  20938056 tgtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaaa-ttac---atat 20938151  T
Q  102 ttaatataaaa 112  Q
    |||||||||||    
T  20938152 ttaatataaaa 20938162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 46492519 - 46492352
Alignment:
Q  6 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatattta 104  Q
    |||||||| |||||||||||| || |||||||| ||||||||| |  ||| ||||||||| |||| |||| |||||| ||||  |||||   ||||||||    
T  46492519 ttgtttaaaatgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgagtta---tatattta 46492423  T
Q  105 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||| ||||||||||| |  |||| |||| |||| | ||| || |||||||| |||  ||||||| ||||||    
T  46492422 atacaaaatgtacaagtttcaatgcaaagttactactttaaatttcttaacgtgtgaaaatttgcacatga 46492352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 51618050 - 51618216
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || ||||||||||||||||||  |  || |||||| || |||| |||| |||||| ||||||   ||   ||||||    
T  51618050 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaaa---ta---tatatt 51618143  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||| ||||||||||| |  |||| |||| |||| ||||  || |||||||||||| |||||||| ||||||    
T  51618144 taatacaaaatgtacaagttccaatgcaaagttacaatttgaaacttcttaacatgtgcaaatttgcacatga 51618216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 53794781 - 53794872
Alignment:
Q  21 aatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaatg 114  Q
    |||||| || |||||||| ||||||||| |||||||| ||||||||||| ||||| | |||| ||||||||||||   |||||||||||||||||    
T  53794781 aatattgcacatgttaaaccaactaaaaataataactatttattgaaaagtaacaataatttattaaaaagttac---atatttaatataaaatg 53794872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 2379238 - 2379162
Alignment:
Q  13 acatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagt 91  Q
    |||||||||||||| || |||||||||||||||||| || ||| |||||||||  ||||||| |||||| |||||||||    
T  2379238 acatgtgcaatattgcacatgttaaaacaactaaaagtagtaagtttttattg--aataacaattatttattaaaaagt 2379162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 165
Target Start/End: Complemental strand, 38786468 - 38786343
Alignment:
Q  36 aaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaattt 135  Q
    ||||||||||||| || ||| |||||||||||||||||| |||||| |||||||  |||||   ||||| ||||||||  ||||||  ||| ||||| ||    
T  38786468 aaaacaactaaaaatagtaattttttattgaaaataacaattatttattaaaaa-atacac---atttagtataaaatccacaaatttcaaatcaaaatt 38786373  T
Q  136 accattttgaaattcttaacatgttcaaat 165  Q
    || ||||| || |||||||||||| |||||    
T  38786372 actattttaaacttcttaacatgtgcaaat 38786343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 11610915 - 11611083
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  11610915 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 11611010  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  11611011 taatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 11611083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 24569408 - 24569324
Alignment:
Q  11 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttac 94  Q
    ||||||||||||||||  | ||||||| ||||||| || |||||||||||||||| |||| | || |||||| ||||||||||||    
T  24569408 taacatgtgcaatattggacatgttaagacaactacaaataataactttttattgaaaaacatcaattatttattaaaaagttac 24569324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 37444149 - 37444232
Alignment:
Q  6 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 89  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||    
T  37444149 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaatcaacaattaattattaaaaa 37444232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 40330468 - 40330381
Alignment:
Q  3 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaag 90  Q
    |||||||||||||| ||||| |||||  ||| |||||||| ||||| || |||||||| |||||||| |||| | |||| ||||||||    
T  40330468 tgtttgtttaacatatgcaacattacgcatgataaaacaattaaaaatagtaacttttaattgaaaacaacaataatttattaaaaag 40330381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 13495294 - 13495455
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| ||||||||||||  || || |||||||   |||||||| || ||| |||||||||||||| |||| |||||| |||||||  |||   |||||    
T  13495294 gtttgtctaacatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctac---atatt 13495390  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 167  Q
    |||||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||    
T  13495391 taatataaaatgcacaagttccaagtcaaaattactactttaaacttcttatcatgtgcaaattt 13495455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 42180052 - 42180213
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||  | | |||||| || |||||||    ||||||    
T  42180052 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagtt---ttatatt 42180148  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 167  Q
    |||||| |||||||||| |  |||| |||| ||   ||||| || |||||||||||| |||||||    
T  42180149 taatattaaatgtacaagttccaatacaaaatttttattttaaacttcttaacatgtgcaaattt 42180213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 37055544 - 37055455
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagtt 92  Q
    |||||| |||||||| ||||||| |||||||||||  |||||||| || |||||||  |||| |||| |||| |||||| ||||||||||    
T  37055544 gtttgtctaacatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt 37055455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 47386922 - 47387013
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg--aaaataacagttatttgttaaaaagtta 93  Q
    |||||| |||||||||||||||| |  || ||||| ||||||||| || ||| |||||||||  |||| |||| |||||| |||||||||||    
T  47386922 gtttgtctaacatgtgcaatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaaaaaaacaattatttattaaaaagtta 47387013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 51401531 - 51401607
Alignment:
Q  97 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 173  Q
    |||||||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||||||||    
T  51401531 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgtacat 51401607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 8497601 - 8497550
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataa 55  Q
    |||| |||||||||||||| ||| || |||||||||||||||||| ||||||    
T  8497601 gtttatttaacatgtgcaacattgcacatgttaaaacaactaaaagtaataa 8497550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 45983516 - 45983675
Alignment:
Q  11 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataa 110  Q
    |||||||||||| |||||||  |||||||||| ||| | || ||||||||| ||   || |||| ||||||||| |||||| |   |||||||||||| |    
T  45983516 taacatgtgcaacattacat--gttaaaacaattaatagtagtaacttttttttttgaaaaacaattatttgttcaaaagtaa---tatatttaatatta 45983610  T
Q  111 aatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||| |  ||||  ||| || | ||||| || |||||||| ||| |||||||| ||||||    
T  45983611 aatgtacaagtttcaatataaaatttctattttaaacttcttaacctgtgcaaatttgcacatga 45983675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 46845618 - 46845531
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaag 90  Q
    |||||| ||| |||||||||||| || || ||||| ||||||||| ||  || |||||||||||||| |||| |||||| ||||||||    
T  46845618 gtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaaag 46845531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 13879973 - 13879899
Alignment:
Q  15 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 89  Q
    ||||||||||||||| || |||||| |||| ||| | | ||||||||||||||||  ||| |||||| |||||||    
T  13879973 atgtgcaatattacacatcttaaaataactgaaagtgaaaactttttattgaaaaccacaattatttattaaaaa 13879899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 25633121 - 25633167
Alignment:
Q  129 caaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||| |||||||| ||||||||| ||||||||||| ||||||    
T  25633121 caaatttactattttgaacttcttaacaagttcaaatttgcacatga 25633167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 26200799 - 26200733
Alignment:
Q  3 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    ||||||| |||||| ||||||||| ||||||||||| ||||||  | || |||||||||| ||||||    
T  26200799 tgtttgtataacatttgcaatattgcatatgttaaagcaactaggagtagtaactttttactgaaaa 26200733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 12515651 - 12515491
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 103  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || |||||||| |||  |||| ||||||   |||||||||   |||||||    
T  12515651 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattaaaaccaacaattatttaacaaaaagtta---tatattt 12515555  T
Q  104 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 167  Q
    |||| ||||||| ||| |  | || |||| |||| ||||| || || ||||||||| |||||||    
T  12515554 aatacaaaatgttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaattt 12515491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 23523038 - 23523115
Alignment:
Q  98 atatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  23523038 atatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 23523115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 30214187 - 30214103
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaa 88  Q
    |||||| ||||||||||||||||||| ||  |||  ||||||||| || |||||||| ||||||||| |||| |||||| ||||||    
T  30214187 gtttgtctaacatgtgcaatattacacattctaaggcaactaaaa-tagtaacttttcattgaaaatcaacaattatttattaaaa 30214103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 32321899 - 32321835
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 69  Q
    |||||| ||||||||| |||||| |||||||||||| |||||||| ||  ||| ||||||||||||    
T  32321899 gtttgtataacatgtgtaatattgcatatgttaaaagaactaaaaatatcaac-ttttattgaaaa 32321835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 49396471 - 49396548
Alignment:
Q  97 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatg 174  Q
    |||||||||||||||||| | ||||   ||||||||||||| | ||| || ||||||| |||| |||||||| |||||    
T  49396471 tatatttaatataaaatgcataaattttaattcaaatttactactttaaacttcttaatatgtacaaatttgcacatg 49396548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 37292 - 37123
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||    
T  37292 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tatt 37196  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    |||||| ||||| |||| |  ||| ||||| ||| || ||| || |||||||||||| |||||||| ||||||    
T  37195 taatatgaaatgcacaagttccaagtcaaagttatcactttaaacttcttaacatgtgcaaatttgcacatga 37123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 443 - 486
Alignment:
Q  5 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 48  Q
    |||||||||||||||||||||| || |||||||| |||||||||    
T  443 tttgtttaacatgtgcaatattgcacatgttaaatcaactaaaa 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 13829 - 13723
Alignment:
Q  11 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatata 109  Q
    |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| || |||||||| || |||||||    ||||||||||||     
T  13829 taacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaaaagttatttatttaaaagtt---ttatatttaatatt 13733  T
Q  110 aaatgtacaa 119  Q
     |||||||||    
T  13732 taatgtacaa 13723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 8564 - 8506
Alignment:
Q  31 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 89  Q
    ||||||||||||| |||| || ||| ||||||||||||| |||| |||||| |||||||    
T  8564 atgttaaaacaacgaaaagtattaattttttattgaaaacaacaattatttattaaaaa 8506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 52956 - 52788
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | |||||||||   |||||    
T  52956 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaaagttac---atatt 52861  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||| ||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  52860 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatga 52788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 94195 - 94086
Alignment:
Q  5 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatattt 103  Q
    ||||| |||||| ||||| ||| || |||||||| ||||||||| || ||| ||||||||||||| ||| | |||||| |||||||   ||  |||||||    
T  94195 tttgtctaacatatgcaacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaaaa---actatatattt 94099  T
Q  104 aatataaaatgta 116  Q
    |||| ||||||||    
T  94098 aatacaaaatgta 94086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 145678 - 145846
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | |||||||||   |||||    
T  145678 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaaagttac---atatt 145773  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||| ||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  145774 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatga 145846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 13086 - 13254
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 102  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || ||| |||| ||||||||  |||| ||  ||| | ||||| |||   |||||    
T  13086 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaatt-gttgattaaaagctac---atatt 13181  T
Q  103 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 175  Q
    ||||||||||   ||||||  ||| | ||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  13182 taatataaaaaacacaaattccaaattaaagttactattttaaacttcttaacatgtgcaaatttgcacatga 13254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 168
Target Start/End: Complemental strand, 18111 - 18012
Alignment:
Q  66 aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 165  Q
    |||| |||| |||||| ||| |||||||   |||||||||||||||||||||||||  |||| ||||  ||| ||||||||  | |||||| || |||||    
T  18111 aaaacaacaattatttattagaaagtta---tatatttaatataaaatgtacaaattccaatacaaacatactattttgaacattttaacacgtgcaaat 18015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 22460 - 22504
Alignment:
Q  4 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 48  Q
    |||| |||||||||||||||||| || |||||||| |||||||||    
T  22460 gtttctttaacatgtgcaatattgcacatgttaaatcaactaaaa 22504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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