View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11793_high_37 (Length: 253)
Name: NF11793_high_37
Description: NF11793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11793_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 251
Target Start/End: Original strand, 20132496 - 20132732
Alignment:
| Q |
20 |
aactagcgaaaattg--ttgagtcatcataacaaacactagctttaatgcttgcaatacccatgcagtaaataagtacatgacttctatatggac----t |
113 |
Q |
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| T |
20132496 |
aactagcgaaaattgctttgagtcatcataacaaacactagctttaatgcttgcaaaacc-atgcagtaaataagtacattacttctatatggacgtact |
20132594 |
T |
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| Q |
114 |
gaagatgnnnnnnnccttgatgtcattgattaaacatacacaagaacacaagactttgtagacaaacatttcttgtataacatcgttaagtttatcagag |
213 |
Q |
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| T |
20132595 |
gtagatgtttttttccttgatgtcattgatgaaacatacataagaacacaagactttgtggacaaacatttcttatataacatcgttaagtttgtcagag |
20132694 |
T |
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| Q |
214 |
atcgaagcattatatacttcctccatccctaattatag |
251 |
Q |
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| T |
20132695 |
atccaagcataatatacttcctccgtccttaattatag |
20132732 |
T |
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