View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11793_high_41 (Length: 231)
Name: NF11793_high_41
Description: NF11793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11793_high_41 |
 | |
|
| [»] scaffold0083 (2 HSPs) |
| | |
|
| [»] scaffold0002 (3 HSPs) |
| | |
|
| [»] scaffold0267 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 11485720 - 11485921
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11485720 |
cacttgataggaagaaattggttttgttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggcgatgattgttt |
11485819 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11485820 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
11485919 |
T |
|
| Q |
214 |
at |
215 |
Q |
| |
|
|| |
|
|
| T |
11485920 |
at |
11485921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 32 - 215
Target Start/End: Complemental strand, 44957058 - 44956875
Alignment:
| Q |
32 |
tggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttttgctgaattgttatctag |
131 |
Q |
| |
|
||||||| || |||||||||||||||||||| ||| || ||| || ||||||||| ||||||| | | | |||||||||||||||||||||||||||| |
|
|
| T |
44957058 |
tggttttgttatggatggcagaaggcttccttgatatttctcaaggtgaaaaagtggcggaggaagttgtttatgattgttttgctgaattgttatctag |
44956959 |
T |
|
| Q |
132 |
atcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattcat |
215 |
Q |
| |
|
||| ||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
44956958 |
atccttaattcaacaattaagtgatgatactcatggagaaaagtttgtcatgcatgaccttgtcaacgatttagctacattcat |
44956875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 33)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 10501256 - 10501457
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||| ||| ||||| || ||||||| |||||||||||| ||| |
|
|
| T |
10501256 |
cactggataggaagaaattggttttgttgtggatggcagaaggcttccttgattattctcaaggcgaaaaaacggcggaggaagtcggtgatgattattt |
10501355 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
10501356 |
tgtcgaattgttatctagatcgttaattcaacaatcaaatgatgatgcttgtggagaaaagtatgtcatgcatgaccttgttaatgatttagcaacattc |
10501455 |
T |
|
| Q |
214 |
at |
215 |
Q |
| |
|
|| |
|
|
| T |
10501456 |
at |
10501457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 11781369 - 11781170
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
||||||| ||||| ||| ||||||| |||||||||||||||||| |||| ||||||| ||| ||| |||| |||||||||||| | |||||||||||||| |
|
|
| T |
11781369 |
cacttgagaggaaaaaactggttttgttgtggatggcagaaggcctccttgattattctcaaggcgaaaatgtggtggaggaagttggtgatgattgttt |
11781270 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11781269 |
tgctgaattgttatcaagatcgttaattcaacaattaagcaatgatgctcatgaagagaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
11781170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 213
Target Start/End: Original strand, 10127610 - 10127809
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
||||||||| ||||| ||||||||| ||||||||||||||||||||||| |||| || ||| || ||||| | |||||||||| |||||||||||||| |
|
|
| T |
10127610 |
cacttgataagaagacattggttttgttgtggatggcagaaggcttccttgattgttctcaagggggaaaagagttggaggaattaggtgatgattgttt |
10127709 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10127710 |
tgctgaattgttatcgagatcattaattcaacaattaagcgatgatgctcgtggagaaaagtttgtcatgcatgaccttgtcaatgatttatctacattc |
10127809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 10089472 - 10089673
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||| |||| || |||||| ||||| | |||||||||| ||||||||||| || |
|
|
| T |
10089472 |
cacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcatgggggaaaagcgatggaggaattaggtgatgattgctt |
10089571 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| || |
|
|
| T |
10089572 |
tgctgaattgttatcgagatcgttaattcaacaattaagcaatgatgctcgtggagaaaagtttgtcatgcatgaccttgtcaacgatttggctacagtc |
10089671 |
T |
|
| Q |
214 |
at |
215 |
Q |
| |
|
|| |
|
|
| T |
10089672 |
at |
10089673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 10196355 - 10196556
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||| |||| || |||||| ||||| | |||||||||| ||||||||||| || |
|
|
| T |
10196355 |
cacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcatgggggaaaagcgatggaggaattaggtgatgattgctt |
10196454 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| || |
|
|
| T |
10196455 |
tgctgaattgttatcgagatcgttaattcaacaattaagcaatgatgctcgtggagaaaagtttgtcatgcatgaccttgtcaacgatttggctacagtc |
10196554 |
T |
|
| Q |
214 |
at |
215 |
Q |
| |
|
|| |
|
|
| T |
10196555 |
at |
10196556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 10032685 - 10032886
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
||||||| ||||||| ||||||||| |||||||||||||||||||||| |||| || ||| || |||| | |||||||||| || ||||||||||| |
|
|
| T |
10032685 |
cacttgaaaggaagacattggttttgctgtggatggcagaaggcttccttgattgttctcaagggggaaaaaagttggaggaattaggcgatgattgttt |
10032784 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10032785 |
tgctgaattgctatcgagatcgttaattcaacaattaagcgatgatgctcgtggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
10032884 |
T |
|
| Q |
214 |
at |
215 |
Q |
| |
|
|| |
|
|
| T |
10032885 |
at |
10032886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 10433431 - 10433232
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||| ||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| || ||||| | |||||||||| ||| |||||||||| |
|
|
| T |
10433431 |
cactcgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaagggggaaaagagttggaggaattaggtaatgattgttt |
10433332 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||||||||| |||||||||||||||| || || ||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10433331 |
tgctgaattgttatcgagatcgttaattcaacgattaaccgatgatgatcgtggagaaaagtttgtcatgcatgaccttgtcaatgatttatctacattc |
10433232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 14 - 213
Target Start/End: Original strand, 10664208 - 10664407
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| || ||| |||||||||| |||||||||||||| |
|
|
| T |
10664208 |
cacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaaggggggaaaacaatggaggaattaggtgatgattgttt |
10664307 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
10664308 |
tgctgaattgttatcgagatctttaattcaacaatcaagcgatgatgctcatggcgaaaagtttgtgatgcatgaccttatcaatgatttagctacattc |
10664407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 11769916 - 11770117
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||||||||||| ||||| |||| || ||| || ||| | ||||||| || ||||||||||| || |
|
|
| T |
11769916 |
cacttgataggaagaaattgattttgttgtggatggcagaaggattccttgattgttctcaaggtgggaaaaagttggaggacttgggtgatgattggtt |
11770015 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
11770016 |
tgctgaattgttatcgagatcgttaattcaacaattaagtgatgatgctcgtggagaaaagtttgttatgcatgaccttgtaaatgatttagctacattc |
11770115 |
T |
|
| Q |
214 |
at |
215 |
Q |
| |
|
|| |
|
|
| T |
11770116 |
at |
11770117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 10261380 - 10261576
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
||||||| ||||||| ||||||||| |||||||||||||||||||||| |||| || ||| || |||| | |||||||||| || ||||||||||| |
|
|
| T |
10261380 |
cacttgaaaggaagacattggttttgctgtggatggcagaaggcttccttgattgttctcaagggggaaaaaagttggaggaattaggcgatgattgttt |
10261479 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10261480 |
tgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgctcgtggagaaaagtttgtcatgcatgaccttgtcagtgatttagctaca |
10261576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 14 - 213
Target Start/End: Original strand, 9839543 - 9839742
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||| ||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| | ||| | |||||||||| |||||||||||||| |
|
|
| T |
9839543 |
cactcgataggaaggaattggttttgttgtggatggcagaaggcttccttgattgttctcaacgggggaaaaagatggaggaattaggtgatgattgttt |
9839642 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| || ||||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9839643 |
tgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgcatgaccttgtcaatgatttagctacattc |
9839742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 14 - 213
Target Start/End: Original strand, 9850421 - 9850620
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||| ||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| | ||| | |||||||||| |||||||||||||| |
|
|
| T |
9850421 |
cactcgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaacgggggaaaaagatggaggaattaggtgatgattgttt |
9850520 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| || ||||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9850521 |
tgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgcatgaccttgtcaatgatttagctacattc |
9850620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 213
Target Start/End: Original strand, 10581292 - 10581491
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||| ||||||||| |||||||||| ||||||||||||||||||||||| |||| || || || ||| | |||||||||| |||||||||||||| |
|
|
| T |
10581292 |
cactcgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttcacaaggggggaaaaagttggaggaattaggtgatgattgttt |
10581391 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
|| |||||||||||| ||||||||||||||||||| || ||||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10581392 |
tgttgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgcatgaccttgtcaatgatttagctacattc |
10581491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 10363185 - 10362986
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||| ||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| || ||| | |||||||||| |||||||||||||| |
|
|
| T |
10363185 |
cactcgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaaggggggaaaaagttggaggaattaggtgatgattgttt |
10363086 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| || |||||| || ||| ||||| |||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
10363085 |
tgctgaattgttatcgagatcgttaattcaacaattaagcaatgatgatcgtggggaaaaatttgtcatgcatgaccttgttaatgatttagcaacattc |
10362986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 10375232 - 10375033
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||||||||| || |||| || ||| || ||||| |||||||||| || |||||||||| |
|
|
| T |
10375232 |
cacttgataggaagcaattggttttgttgtggatggcagaaggctttcttgattgttctcaagggggaaaagatttggaggaattaggcaatgattgttt |
10375133 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||| || ||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10375132 |
tgctgaattgttattgagatcattaattcaacaattaagcgatgatgcttgtggaaaaaagtttgtcatgcatgaccttgtcaatgatttatctacattc |
10375033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 10518167 - 10518372
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||||| ||| | |||| | | |||||||| | |||||||||||||| |
|
|
| T |
10518167 |
cacttgagaggaaaaaattggttttgttgtggatggcagaaggtttccttgattattctcaagatgaaaatgcgatggaggaaattggtgatgattgttt |
10518266 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||| ||||| ||||| ||||||||||||| || |||||||||||| | |||||| ||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
10518267 |
tgctgaattattatcaagatcattaattcaacaattaagcaatgatgctcatgaaaaaaagtgtgtcatgcatgaccttgtccacgatttagctacattc |
10518366 |
T |
|
| Q |
214 |
atctca |
219 |
Q |
| |
|
||||| |
|
|
| T |
10518367 |
gtctca |
10518372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 10077951 - 10078147
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||||| || ||||||| ||||| | ||| | |||| ||||| |||| |||||| || |
|
|
| T |
10077951 |
cacttgacaggaagaaattggttttgctgtggatggcagaaggctttcttgattattcacatggggagaaaacgatggaagaattaggtggtgattgctt |
10078050 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
||||||||| || || ||||| ||||||||||||||||||||| ||| || ||||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
10078051 |
tgctgaattattgtccagatccttaattcaacaatcaaatgataatggtcgtggagaaaagtttttcatgcatgaccttgtcaatgatttggctaca |
10078147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 210
Target Start/End: Original strand, 10184932 - 10185120
Alignment:
| Q |
22 |
aggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttttgctgaat |
121 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| || ||||||| ||||| | ||| | |||| ||||| ||||||||||| |||||||||| |
|
|
| T |
10184932 |
aggaagaaattggttttgctgtggatggcagaaggctttcttgattattcacatggggagaaaacgatggaagaattaggtgatgattgctttgctgaat |
10185031 |
T |
|
| Q |
122 |
tgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
| || || ||||| ||||||||||||||||||||| ||| || ||||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
10185032 |
tattgtccagatccttaattcaacaatcaaatgataatggtcgtggagaaaagtttttcatgcatgaccttgtcaatgatttggctaca |
10185120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 10528040 - 10528236
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
||||||||| ||||| ||||||||| ||||||||||||||||||||||| |||| || ||| | |||| ||| |||||| | |||||||| || || |
|
|
| T |
10528040 |
cacttgataagaagacattggttttgttgtggatggcagaaggcttcctcgattgttctcaagagggaaaaatggcagaggaagtaggtgatgactgctt |
10528139 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
|||||||||||| || ||||| |||||||| ||||||||| ||| || || |||| |||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
10528140 |
tgctgaattgttgtccagatccttaattcagcaatcaaatcatgttggtcgtggaaaaaagtttttcatgcatgaccttgtcaacgatttagctaca |
10528236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 11159404 - 11159208
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||| | | |||||| |||| ||| | |||||||||||||| |
|
|
| T |
11159404 |
cacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattattctcaggacgaaaaagccatggaagaagtaggtgatgattgttt |
11159305 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||| | ||| || | | | ||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
11159304 |
tgctgaattgttatccagatcattaattcaacaactacatgttggtaccagaaaacaaaagtttgtcatgcatgaccttgttaatgatttagctaca |
11159208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 13854067 - 13853871
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| || |||| || |||||||| ||||||||||| || |
|
|
| T |
13854067 |
cacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgattgttctcaagggggaaaaatgactgaggaatttggtgatgattgctt |
13853968 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
| |||||||| ||| ||||| ||||||||||||||||||||||||| | |||| ||| ||| ||||||||||||||||||| || ||||||||| |
|
|
| T |
13853967 |
tcttgaattgtcatccagatccttaattcaacaatcaaatgatgatggttttggaaaaatctttttcatgcatgaccttgtcaacgacttagctaca |
13853871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 10672364 - 10672560
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
||||||||| ||||| ||||||||| ||||||||||||||||||||||| |||| || ||| | |||| ||| |||||| | |||||||| || || |
|
|
| T |
10672364 |
cacttgataagaagacattggttttgttgtggatggcagaaggcttcctcgattgttctcaagagggaaaaatggcagaggaagtaggtgatgactgctt |
10672463 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
|||||||||||| || ||||| |||||||| ||||||||||||| || || |||| |||||||| |||| ||||||||| |||| |||||| ||||| |
|
|
| T |
10672464 |
tgctgaattgttgtccagatccttaattcagcaatcaaatgatgttggtcgtggaaaaaagtttttcatacatgaccttatcaacgatttaactaca |
10672560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 10889988 - 10890184
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||| | ||| ||| ||| | ||||| |||| ||| | |||||||| || || |
|
|
| T |
10889988 |
cacttgataggaagaaattggttttgttgtggatggcagaaggcttcattgatcattctcaagatggaaaagctatggaagaagtaggtgatgagtgctt |
10890087 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
| ||||||||||||||||||| |||||||| ||| |||||||| || | ||| ||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10890088 |
ttctgaattgttatctagatcattaattcagcaactgtatgatgattctgaaggacaaatatttgtcatgcatgaccttgttaatgatttagctaca |
10890184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 208
Target Start/End: Complemental strand, 11246008 - 11245814
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||| ||| | ||||| |||| ||| | |||||||| || || |
|
|
| T |
11246008 |
cacttgataggaagcaattggttttgttgtggatggcagaaggcttccttgatcattctcaagatggaaaagctatggaagaagtaggtgatgagtgctt |
11245909 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagcta |
208 |
Q |
| |
|
| ||||||||||||||||||| |||||||| || ||| |||| || | ||| ||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
11245908 |
ttctgaattgttatctagatcattaattcagaaactgcatggtgattctgaaggacaaatatttgtcatgcatgaccttgttaatgatttagcta |
11245814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 210
Target Start/End: Original strand, 8861967 - 8862164
Alignment:
| Q |
13 |
tcacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgtt |
112 |
Q |
| |
|
|||||| |||||||| ||||||| || ||||||||||||||||||||||| ||| ||| | | | ||||| |||| || | ||||||||||||| |
|
|
| T |
8861967 |
tcacttaataggaagcaattggtattgttgtggatggcagaaggcttccttgatcattctaaagatgaaaaacccatggaagatgtaggtgatgattgtt |
8862066 |
T |
|
| Q |
113 |
ttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
|||||||| ||||||| ||||| |||||||||||| | ||| || | || | | ||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8862067 |
ttgctgaactgttatccagatcattaattcaacaactacatgttggtactagagaacaaaagtttgtcatgcatgaccttgttaatgatttagctaca |
8862164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 11130413 - 11130217
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
||||| |||||||| |||||||||| ||||||||||||||||||||||| ||| ||| | | | | ||||| |||| ||| | |||||||||||||| |
|
|
| T |
11130413 |
cactttataggaagcaattggttttgttgtggatggcagaaggcttccttgatcattctaaagacgaaaaacccatggaagaagtaggtgatgattgttt |
11130314 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
||| ||| ||||||| || || |||||||||||| | ||| |||| || ||||||| |||||||||||| || |||| ||||| ||||||||| |
|
|
| T |
11130313 |
tgcagaactgttatccaggtcattaattcaacaactacatgttgatactagaggagaaaggtttgtcatgcacgattttgttaatgacttagctaca |
11130217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 210
Target Start/End: Complemental strand, 11148242 - 11148045
Alignment:
| Q |
13 |
tcacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgtt |
112 |
Q |
| |
|
|||||| ||||||| ||||||| || ||||||||||||||||||||||| ||| ||| | | | | ||||| | || ||| | ||||||||||||| |
|
|
| T |
11148242 |
tcacttaataggaatcaattggtattgttgtggatggcagaaggcttccttgatcattctaaagacgaaaaacccattgaagaagtaggtgatgattgtt |
11148143 |
T |
|
| Q |
113 |
ttgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
|||||||| ||||||| ||||| ||||||||||| | ||| |||| || ||||||| |||||||||||| || |||| ||||| ||||||||| |
|
|
| T |
11148142 |
ttgctgaactgttatccagatcattaattcaacagctacatgttgatactagaggagaaaggtttgtcatgcacgattttgttaatgagttagctaca |
11148045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 13161765 - 13161851
Alignment:
| Q |
117 |
tgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagc |
206 |
Q |
| |
|
|||||||||||| || || ||||||||||||||||||||||||| | |||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
13161765 |
tgaattgttatccaggtccttaattcaacaatcaaatgatgatggaaa---agaaaaatttgttatgcacgaccttgtcaatgatttagc |
13161851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 13171816 - 13171902
Alignment:
| Q |
117 |
tgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagc |
206 |
Q |
| |
|
|||||||||||| || | ||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
13171816 |
tgaattgttatccaggtgcttaattcaacaatcaaatgatgatggaaa---agaaaaatttgttatgcatgaccttgtcaatgatttagc |
13171902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 13290450 - 13290536
Alignment:
| Q |
117 |
tgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagc |
206 |
Q |
| |
|
|||||||||||| || || ||||||||||||||||||||||||| | |||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
13290450 |
tgaattgttatccaggtccttaattcaacaatcaaatgatgatggaaa---agaaaaatttgttatgcacgaccttgtcaatgatttagc |
13290536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 13333689 - 13333775
Alignment:
| Q |
117 |
tgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagc |
206 |
Q |
| |
|
|||||||||||| || || ||||||||||||||||||||||||| | |||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
13333689 |
tgaattgttatccaggtccttaattcaacaatcaaatgatgatggaaa---agaaaaatttgttatgcacgaccttgtcaatgatttagc |
13333775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 13344874 - 13344960
Alignment:
| Q |
117 |
tgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagc |
206 |
Q |
| |
|
|||||||||||| || || ||||||||||||||||||||||||| | |||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
13344874 |
tgaattgttatccaggtccttaattcaacaatcaaatgatgatggaaa---agaaaaatttgttatgcacgaccttgtcaatgatttagc |
13344960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 13396177 - 13396219
Alignment:
| Q |
20 |
ataggaagaaattggttttcttgtggatggcagaaggcttcct |
62 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
13396177 |
ataggaagaaattgattttgttgtggatggcagaaggcttcct |
13396219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 26907579 - 26907775
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||||||||| ||| ||||||| || ||||||||||||||||||||||| || | || ||| || ||||| | | ||||| || |||||||||| || |
|
|
| T |
26907579 |
cacttgatagaaagcaattggtcttgttgtggatggcagaaggcttccttgactgttctcaagggggaaaagagttagaggagttaggtgatgatttctt |
26907678 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
|||||||||| |||| ||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26907679 |
tgctgaattgctatccagatccttaattcaacaatcaaatgatgatgctcgtggggaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
26907775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 56989 - 56790
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||| |||| |||| |||||||||| ||||||||||||||||| ||||| |||| || ||| || ||| | |||||||||| |||||||||||||| |
|
|
| T |
56989 |
cactcgataagaagcaattggttttgttgtggatggcagaaggtttccttgattgttctcaaggggggaaaaagttggaggaattaggtgatgattgttt |
56890 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| || ||||||| || ||| ||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
56889 |
tgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgcatgaccttatcaatgatttagctacattc |
56790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 57798 - 57599
Alignment:
| Q |
14 |
cacttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttt |
113 |
Q |
| |
|
|||| |||| |||| |||||||||| ||||||||||||||||| ||||| |||| || ||| || ||| | |||||||||| |||||||||||||| |
|
|
| T |
57798 |
cactcgataagaagcaattggttttgttgtggatggcagaaggtttccttgattgttctcaaggggggaaaaagttggaggaattaggtgatgattgttt |
57699 |
T |
|
| Q |
114 |
tgctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctacattc |
213 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| || ||||||| || ||| ||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
57698 |
tgctgaattgttatcgagatcgttaattcaacaattaagcgatgatgatcgtggggaaaaatttgtcatgcatgaccttttcaatgatttagctacattc |
57599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 17852307 - 17852114
Alignment:
| Q |
17 |
ttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttttgc |
116 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| ||||| || |||| ||| || ||||| | |||||| | ||||| || |||||| | |
|
|
| T |
17852307 |
ttgataggaagaaattggttttgttgtggatggcagaaggattcctcgactattctcaagggggaaaagcagcagaggaagtgggtgacgactgtttttc |
17852208 |
T |
|
| Q |
117 |
tgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
|||||||||||| ||||| |||||||||||| ||||||||||| |||||| |||||||| ||||||| | ||||||| | || ||||||||| |
|
|
| T |
17852207 |
tgaattgttatccagatccttaattcaacaaacaaatgatgattctcatgagaaaaagtttttcatgcacggccttgtctacgacttagctaca |
17852114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 31679118 - 31678924
Alignment:
| Q |
16 |
cttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgttttg |
115 |
Q |
| |
|
|||||||||||| || ||||||| |||||||||| ||||||||||| || ||| ||| || |||||| |||||||| | |||||||| | |||| |
|
|
| T |
31679118 |
cttgataggaagcaaatggttttgctgtggatggctgaaggcttccttgaacattctcaaggagaaaaagcaatggaggaagttggtgatgactactttg |
31679019 |
T |
|
| Q |
116 |
ctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||||| | || | |||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
31679018 |
ttgaattgttatctagatcgttaattcaacaatcgcacgatgattttggaagacagaagtttctcatgcatgatcttgtcaatgatttagctaca |
31678924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 190
Target Start/End: Original strand, 29837323 - 29837498
Alignment:
| Q |
15 |
acttgataggaagaaattggttttcttgtggatggcagaaggcttcctggattattgtcatggccaaaaagtggtggaggaattcggtgatgattgtttt |
114 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||| ||| | || ||| || || | ||||| | |||||| | ||| | || | ||| |
|
|
| T |
29837323 |
acttgataggaagcaattggttttgttgtggatggcagaaggattcattgagcattatctaggtccaaaagaagcagaggaaataggtaacgagttcttt |
29837422 |
T |
|
| Q |
115 |
gctgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgacc |
190 |
Q |
| |
|
||||||||| |||||||||| |||||||||||| || |||||||| || |||||||||| |||||||||||||||| |
|
|
| T |
29837423 |
gctgaattgatatctagatccttaattcaacaagcatatgatgatactgatggagaaaaatttgtcatgcatgacc |
29837498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 135172 - 135086
Alignment:
| Q |
117 |
tgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagc |
206 |
Q |
| |
|
|||||||||||| || | ||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
135172 |
tgaattgttatccaggtgcttaattcaacaatcaaatgatgatggaaa---agaaaaatttgttatgcatgaccttgtcaatgatttagc |
135086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 145223 - 145137
Alignment:
| Q |
117 |
tgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagc |
206 |
Q |
| |
|
|||||||||||| || || ||||||||||||||||||||||||| | |||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
145223 |
tgaattgttatccaggtccttaattcaacaatcaaatgatgatggaaa---agaaaaatttgttatgcacgaccttgtcaatgatttagc |
145137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 153528 - 153442
Alignment:
| Q |
117 |
tgaattgttatctagatcgttaattcaacaatcaaatgatgatgctcatggagaaaagtttgtcatgcatgaccttgtcaatgatttagc |
206 |
Q |
| |
|
|||||||||||| || || ||||||||||||||||||||||||| | |||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
153528 |
tgaattgttatccaggtccttaattcaacaatcaaatgatgatggaaa---agaaaaatttgttatgcacgaccttgtcaatgatttagc |
153442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0267 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0267
Description:
Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 19311 - 19340
Alignment:
| Q |
181 |
atgcatgaccttgtcaatgatttagctaca |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
19311 |
atgcatgaccttgtcaatgatttagctaca |
19340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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