View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11793_low_1 (Length: 931)

Name: NF11793_low_1
Description: NF11793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11793_low_1
NF11793_low_1
[»] chr1 (32 HSPs)
chr1 (20-559)||(38627981-38628520)
chr1 (557-924)||(38627176-38627538)
chr1 (211-319)||(38698003-38698112)
chr1 (685-755)||(25130805-25130875)
chr1 (685-755)||(26501397-26501467)
chr1 (682-755)||(3977566-3977639)
chr1 (689-737)||(3100548-3100596)
chr1 (685-725)||(9011747-9011787)
chr1 (684-725)||(6829714-6829755)
chr1 (685-734)||(25995562-25995611)
chr1 (685-734)||(47059810-47059859)
chr1 (685-725)||(13813660-13813700)
chr1 (685-725)||(42843273-42843313)
chr1 (692-743)||(32640327-32640377)
chr1 (684-726)||(2827638-2827680)
chr1 (685-715)||(7371887-7371917)
chr1 (684-769)||(13078939-13079022)
chr1 (689-731)||(17526526-17526568)
chr1 (685-715)||(19920864-19920894)
chr1 (685-715)||(25239176-25239206)
chr1 (685-743)||(26760664-26760722)
chr1 (685-715)||(29362631-29362661)
chr1 (685-755)||(29489258-29489328)
chr1 (685-755)||(37947119-37947189)
chr1 (685-714)||(5959490-5959519)
chr1 (684-768)||(7420735-7420817)
chr1 (682-715)||(8934473-8934506)
chr1 (685-734)||(21255705-21255754)
chr1 (685-734)||(32966369-32966418)
chr1 (685-734)||(34941840-34941889)
chr1 (684-725)||(50777352-50777393)
chr1 (685-734)||(51168688-51168737)
[»] chr3 (31 HSPs)
chr3 (685-755)||(30633713-30633783)
chr3 (687-768)||(47683894-47683973)
chr3 (685-725)||(30400085-30400125)
chr3 (689-755)||(44855357-44855423)
chr3 (685-755)||(50279986-50280056)
chr3 (685-734)||(1031347-1031396)
chr3 (685-722)||(3069507-3069544)
chr3 (685-725)||(11574656-11574696)
chr3 (685-725)||(13159763-13159803)
chr3 (685-725)||(20714345-20714385)
chr3 (685-725)||(32931847-32931887)
chr3 (685-725)||(36819058-36819098)
chr3 (684-744)||(46323025-46323085)
chr3 (689-741)||(50657344-50657396)
chr3 (685-725)||(54233430-54233470)
chr3 (684-755)||(11327209-11327280)
chr3 (684-715)||(34021402-34021433)
chr3 (684-743)||(43460489-43460548)
chr3 (684-734)||(21481865-21481915)
chr3 (685-755)||(35756082-35756152)
chr3 (684-738)||(37585532-37585586)
chr3 (685-770)||(43149229-43149312)
chr3 (684-714)||(44910805-44910835)
chr3 (685-714)||(23906927-23906956)
chr3 (685-718)||(28263647-28263680)
chr3 (685-714)||(28884582-28884611)
chr3 (685-734)||(35376471-35376520)
chr3 (684-713)||(42864975-42865004)
chr3 (685-734)||(44127112-44127161)
chr3 (686-755)||(49114499-49114568)
chr3 (685-714)||(50652490-50652519)
[»] chr8 (26 HSPs)
chr8 (684-768)||(33511702-33511784)
chr8 (684-772)||(13540793-13540879)
chr8 (684-772)||(13683594-13683680)
chr8 (689-753)||(5924916-5924980)
chr8 (689-753)||(5925161-5925225)
chr8 (685-755)||(6825176-6825246)
chr8 (685-755)||(30927830-30927900)
chr8 (685-755)||(37562040-37562110)
chr8 (684-725)||(7602960-7603001)
chr8 (685-725)||(2597089-2597129)
chr8 (685-725)||(33817259-33817299)
chr8 (692-743)||(23138706-23138756)
chr8 (685-724)||(41273617-41273656)
chr8 (685-755)||(14531723-14531793)
chr8 (685-755)||(19723105-19723175)
chr8 (684-714)||(20994998-20995028)
chr8 (685-715)||(32185605-32185635)
chr8 (684-718)||(36015658-36015692)
chr8 (685-715)||(41293660-41293690)
chr8 (684-714)||(43605609-43605639)
chr8 (685-734)||(5359440-5359489)
chr8 (686-715)||(7129636-7129665)
chr8 (685-722)||(13267018-13267055)
chr8 (681-734)||(32234372-32234425)
chr8 (685-722)||(39258987-39259024)
chr8 (684-725)||(39359837-39359878)
[»] chr5 (21 HSPs)
chr5 (684-725)||(25345439-25345480)
chr5 (685-755)||(12401294-12401364)
chr5 (685-725)||(9596743-9596783)
chr5 (685-725)||(12512895-12512935)
chr5 (685-725)||(17489450-17489490)
chr5 (684-734)||(41210434-41210484)
chr5 (685-725)||(9594580-9594620)
chr5 (685-725)||(15622146-15622186)
chr5 (682-718)||(15917962-15917998)
chr5 (685-725)||(22920421-22920461)
chr5 (685-725)||(28501719-28501759)
chr5 (685-725)||(33823623-33823663)
chr5 (684-755)||(35616700-35616771)
chr5 (684-714)||(1760462-1760492)
chr5 (685-715)||(2051028-2051058)
chr5 (685-715)||(7080616-7080646)
chr5 (685-715)||(19271961-19271991)
chr5 (685-715)||(30574316-30574346)
chr5 (684-734)||(31625996-31626046)
chr5 (688-753)||(16143602-16143667)
chr5 (684-725)||(22653740-22653781)
[»] chr4 (35 HSPs)
chr4 (685-753)||(32365568-32365636)
chr4 (685-755)||(2193708-2193778)
chr4 (685-755)||(53384241-53384310)
chr4 (685-738)||(25936342-25936395)
chr4 (688-768)||(34259931-34260009)
chr4 (685-725)||(31221515-31221555)
chr4 (685-731)||(18634803-18634849)
chr4 (685-755)||(24235422-24235492)
chr4 (685-755)||(44368101-44368171)
chr4 (685-751)||(46480409-46480475)
chr4 (689-746)||(50383104-50383161)
chr4 (685-725)||(3223091-3223131)
chr4 (685-725)||(5208256-5208296)
chr4 (685-725)||(20056484-20056524)
chr4 (685-725)||(27001338-27001378)
chr4 (685-725)||(32901431-32901471)
chr4 (685-725)||(47106013-47106053)
chr4 (685-725)||(51377222-51377262)
chr4 (684-739)||(6686147-6686202)
chr4 (685-755)||(7037383-7037453)
chr4 (685-715)||(8026703-8026733)
chr4 (685-715)||(13267417-13267447)
chr4 (684-738)||(25241793-25241847)
chr4 (684-730)||(31318849-31318895)
chr4 (684-714)||(36364725-36364755)
chr4 (685-715)||(41495115-41495145)
chr4 (685-755)||(52669508-52669578)
chr4 (685-734)||(5234391-5234440)
chr4 (684-725)||(8456004-8456045)
chr4 (685-734)||(18874844-18874893)
chr4 (685-773)||(22893970-22894056)
chr4 (685-773)||(22945638-22945724)
chr4 (685-734)||(33860466-33860515)
chr4 (685-734)||(43982999-43983048)
chr4 (684-725)||(44272741-44272782)
[»] scaffold0193 (1 HSPs)
scaffold0193 (685-755)||(24775-24845)
[»] chr2 (25 HSPs)
chr2 (684-734)||(24491597-24491647)
chr2 (685-725)||(27307174-27307214)
chr2 (684-744)||(32755779-32755839)
chr2 (685-751)||(3299008-3299074)
chr2 (685-755)||(37966458-37966528)
chr2 (685-755)||(44484555-44484625)
chr2 (684-768)||(42141498-42141580)
chr2 (685-753)||(17826149-17826217)
chr2 (685-725)||(23048012-23048052)
chr2 (685-725)||(36383564-36383604)
chr2 (684-715)||(4432428-4432459)
chr2 (681-736)||(31009665-31009720)
chr2 (690-725)||(34144481-34144516)
chr2 (692-743)||(41749579-41749629)
chr2 (685-715)||(5962740-5962770)
chr2 (684-734)||(16463393-16463443)
chr2 (685-715)||(30487391-30487421)
chr2 (685-715)||(36909782-36909812)
chr2 (685-734)||(6365288-6365337)
chr2 (689-734)||(6742330-6742375)
chr2 (689-734)||(20974460-20974505)
chr2 (685-718)||(33857319-33857352)
chr2 (684-768)||(35518376-35518458)
chr2 (684-713)||(37109313-37109342)
chr2 (685-734)||(37631287-37631336)
[»] scaffold0016 (1 HSPs)
scaffold0016 (684-739)||(204362-204417)
[»] chr7 (24 HSPs)
chr7 (684-755)||(30201360-30201431)
chr7 (685-755)||(26041412-26041482)
chr7 (685-755)||(44511241-44511311)
chr7 (685-755)||(48057396-48057466)
chr7 (684-753)||(37149376-37149445)
chr7 (685-769)||(42431825-42431907)
chr7 (689-768)||(43255455-43255532)
chr7 (685-725)||(44175647-44175687)
chr7 (690-725)||(19880161-19880196)
chr7 (685-771)||(25614706-25614790)
chr7 (684-715)||(32315927-32315958)
chr7 (684-755)||(33050284-33050355)
chr7 (685-744)||(49014309-49014368)
chr7 (684-738)||(7410501-7410554)
chr7 (682-755)||(8235619-8235693)
chr7 (687-725)||(8326229-8326267)
chr7 (685-715)||(27164776-27164806)
chr7 (685-715)||(35005038-35005068)
chr7 (684-734)||(44185277-44185327)
chr7 (684-768)||(7295568-7295650)
chr7 (685-734)||(40077357-40077406)
chr7 (681-765)||(41186326-41186408)
chr7 (684-725)||(41227176-41227217)
chr7 (684-725)||(42118626-42118667)
[»] chr6 (10 HSPs)
chr6 (684-755)||(3339398-3339469)
chr6 (681-724)||(24881708-24881751)
chr6 (689-734)||(9188866-9188911)
chr6 (685-725)||(1803971-1804011)
chr6 (684-755)||(27334965-27335036)
chr6 (684-755)||(27395705-27395776)
chr6 (697-743)||(363527-363572)
chr6 (684-734)||(7304025-7304075)
chr6 (685-715)||(17902631-17902661)
chr6 (685-734)||(23653813-23653862)
[»] scaffold0687 (1 HSPs)
scaffold0687 (684-725)||(642-683)
[»] scaffold0002 (1 HSPs)
scaffold0002 (685-725)||(147185-147225)
[»] scaffold0651 (1 HSPs)
scaffold0651 (684-730)||(4775-4821)
[»] scaffold0514 (1 HSPs)
scaffold0514 (685-715)||(1435-1465)
[»] scaffold0003 (1 HSPs)
scaffold0003 (685-755)||(88910-88980)
[»] scaffold0024 (1 HSPs)
scaffold0024 (705-754)||(89446-89495)


Alignment Details
Target: chr1 (Bit Score: 485; Significance: 0; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 485; E-Value: 0
Query Start/End: Original strand, 20 - 559
Target Start/End: Complemental strand, 38628520 - 38627981
Alignment:
Q  20 agtattgaatgcattctaaccatttttaatttgtaggatatgctctatttttcagtattagtctgtttagtagtgtgagcagaaaaggaagcgaatggta 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38628520 agtattgaatgcattctaaccatttttaatttgtaggatatgctctatttttcagtattagtctgtttagtagtgtgaacagaaaaggaagcgaatggta 38628421  T
Q  120 tgcaagtatgtatatatgctgttggatactaattaaggttgaggtgaagaatatatgcctcatcatgagtatatataggttggaaaatatatgaagggga 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||||||||||||||||||    
T  38628420 tgcaagtatgtatatatgctgttggatactaattaaggttgaggtgaagaatatatgcctcatgagta-tatatataggttggaaaatatatgaagggga 38628322  T
Q  220 ggaggtgagagtaggtcttactttggaaagaaaa-cgtgtttggctgtagccttcaatgttaaataaaacttgaagtaatctacttttgaacacttcttc 318  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  38628321 ggaggtgagagtaggtcttactttggaaacaaaaacgtgtttggctgtagccttcaatgttaaacaaaacttgaagtaatctacttttgaacaattcttc 38628222  T
Q  319 ttgctcagtctggatgctatgcctatgtttataattagatggacatagaatatttgctgctaaacacctacttcgtcacacaaacattcttacaagaaac 418  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38628221 ttgctcagtctggatgctatgcctatgcttataattagatggacatagaatatttgctgctaaacacctacttcgtcacacaaaaattcttacaagaaac 38628122  T
Q  419 atagtggcttatgattaccaggtcgttctgcttttatatttaacaaatatgccgacttttgtgtgttaaagcacatagttgtcatcataccgtgtgcagg 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38628121 atagtggcttatgattaccaggtcgttctgcttttatatttaacaaatatgccgacttttgtgtgttaaagcacatagttgtcatcataccgtgtgcagg 38628022  T
Q  519 gccgtatcatgtagggccacatcaatggagaatgcaattta 559  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  38628021 tccgtatcatgtagggccacatcaatggagaatgcaattta 38627981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 557 - 924
Target Start/End: Complemental strand, 38627538 - 38627176
Alignment:
Q  557 ttaaactagatacttgttcattagcatcgataattgacaactattttggaacaattcttgcacaactccctcgctcatatactcttattgtgtttactct 656  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38627538 ttaaactagatacttgttcattagcattgataattgacaactattttggaacaattcttggacaactccctcgctcatatactcttattgtgtttactct 38627439  T
Q  657 ctatcttattcnnnnnnnnnnnnnctatattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaa 756  Q
    ||||||| |||             |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||     
T  38627438 ctatctttttctttttttttt---ctatattgtttttgaccaataagaagagggaaaaataatattgtcttaaaagttatcacaaaatagatgtacaaa- 38627343  T
Q  757 atatcattactcaattaagagatgctataaacattctctttctaacactctctcatgtcgggtgaaatccatgtgaatctgaccactttatgcgagacca 856  Q
     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38627342 -tatcattactcaattaagagatgctataaacactctctttctaacactctctcatgtcgggtgaaatccatgtgaatctgaccactttatgcgagacca 38627244  T
Q  857 atttccaaagtataatactcacatgaatttcaagagagtgtgggttagaaagggtgttcatctcactc 924  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||| ||||||    
T  38627243 atttccaaagtatagtactcacatgaatttcaagatagtgtgggttagaaagagtgttcatatcactc 38627176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 211 - 319
Target Start/End: Original strand, 38698003 - 38698112
Alignment:
Q  211 tgaaggggaggaggtgagagtaggtcttactttggaaagaaaa-cgtgtttggctgtagccttcaatgttaaataaaacttgaagtaatctacttttgaa 309  Q
    ||||||||| ||| ||||||||||| |||||||| ||| |||| |||||||||||| |||||||||| ||| | | || |||||| |||| |||||||||    
T  38698003 tgaaggggaagagatgagagtaggtattactttgtaaacaaaaacgtgtttggctgcagccttcaattttagacagaagttgaagcaatccacttttgaa 38698102  T
Q  310 cacttcttct 319  Q
    | ||||||||    
T  38698103 ctcttcttct 38698112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 685 - 755
Target Start/End: Original strand, 25130805 - 25130875
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||||||||||| ||| |||||   |||||| |||  |||||||||||||||    
T  25130805 attgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatagatgtacaaa 25130875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 685 - 755
Target Start/End: Original strand, 26501397 - 26501467
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||||||||||| ||| ||||| | |||||| |||   ||||||||||||||    
T  26501397 attgtttttgaccaataagaagagagaaaaacaaggttgtcattaaagttgtcatgtaatagatgtacaaa 26501467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 682 - 755
Target Start/End: Complemental strand, 3977639 - 3977566
Alignment:
Q  682 tatattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||| ||||| || |||||||||| | |||||||| ||| |||| |||||| ||||||||||||||||||||    
T  3977639 tatattatttttaactaataagaagataaaaaaataaaattatctttaaagttgtcacaaaatagatgtacaaa 3977566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 689 - 737
Target Start/End: Original strand, 3100548 - 3100596
Alignment:
Q  689 tttttgaccaataagaagagagaaaaataagattgtcttaaaagttatc 737  Q
    |||||||| |||||||||||||||||| ||||||||| |||||||||||    
T  3100548 tttttgactaataagaagagagaaaaacaagattgtcataaaagttatc 3100596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 9011747 - 9011787
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  9011747 attgtttttgaccaataagaagagagaaaaacaagattgtc 9011787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 725
Target Start/End: Complemental strand, 6829755 - 6829714
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  6829755 tattatttttgaccaataagaagagagaaaaacaagattgtc 6829714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 685 - 734
Target Start/End: Original strand, 25995562 - 25995611
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||||| |||||||||||||||| ||||| | ||||||    
T  25995562 attgtttttgaccaataaaaagagagaaaaataaggttgtcattaaagtt 25995611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 685 - 734
Target Start/End: Complemental strand, 47059859 - 47059810
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||| | |||||||||||||||||||||| | ||||||    
T  47059859 attgtttttgaccaatgaaaagagagaaaaataagattgtcatgaaagtt 47059810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 13813660 - 13813700
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  13813660 attgtttttgaccaataagaagagagaaaaacaaggttgtc 13813700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 42843313 - 42843273
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  42843313 attgtttttgaccaataagaagagagaaaaacaaggttgtc 42843273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 743
Target Start/End: Complemental strand, 32640377 - 32640327
Alignment:
Q  692 ttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaa 743  Q
    ||||||||||||||||| ||| || ||||||||||||||| |||||||||||    
T  32640377 ttgaccaataagaagagtgaataagaagattgtcttaaaa-ttatcacaaaa 32640327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 726
Target Start/End: Complemental strand, 2827680 - 2827638
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtct 726  Q
    ||||||||||||||||||||||||||||| || || |||||||    
T  2827680 tattgtttttgaccaataagaagagagaacaacaaaattgtct 2827638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 7371917 - 7371887
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  7371917 attgtttttgaccaataagaagagagaaaaa 7371887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 769
Target Start/End: Original strand, 13078939 - 13079022
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactca 769  Q
    |||||||||| |||||||| ||||  |||||| || |||||||||||| |||||| ||||| | | |||  |||||||||||||||    
T  13078939 tattgttttttaccaataaaaagaacgaaaaagaaaattgtcttaaaaattatcataaaatggttctac--aaatatcattactca 13079022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 689 - 731
Target Start/End: Original strand, 17526526 - 17526568
Alignment:
Q  689 tttttgaccaataagaagagagaaaaataagattgtcttaaaa 731  Q
    |||||||||||||| ||||||||||||| |||||||| |||||    
T  17526526 tttttgaccaataaaaagagagaaaaatgagattgtcataaaa 17526568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Original strand, 19920864 - 19920894
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  19920864 attgtttttgaccaataagaagagagaaaaa 19920894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 25239206 - 25239176
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  25239206 attgtttttgaccaataagaagagagaaaaa 25239176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 743
Target Start/End: Original strand, 26760664 - 26760722
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaa 743  Q
    |||||||||||||||||| ||||||| | || ||| |||||| ||||||||| ||||||    
T  26760664 attgtttttgaccaataaaaagagagcacaacaaggttgtctcaaaagttataacaaaa 26760722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 29362661 - 29362631
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  29362661 attgtttttgaccaataagaagagagaaaaa 29362631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 29489328 - 29489258
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||| ||||||| ||| |||||   |||||| |||  ||||| |||||||||    
T  29489328 attgtttttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgtcatgaaatatatgtacaaa 29489258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 37947189 - 37947119
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||||||||||||| ||||||||||| || ||| |||||  ||||||| | ||||||||| ||| ||||    
T  37947189 attgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaacaaaatagttgttcaaa 37947119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 714
Target Start/End: Original strand, 5959490 - 5959519
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaa 714  Q
    ||||||||||||||||||||||||||||||    
T  5959490 attgtttttgaccaataagaagagagaaaa 5959519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 768
Target Start/End: Original strand, 7420735 - 7420817
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactc 768  Q
    ||||||| |||||||||||||| |||||| || ||  ||||| |||||||| |||| |||||  |||||  ||||||||||||||    
T  7420735 tattgttcttgaccaataagaaaagagaagaaaaaagttgtcctaaaagttgtcacgaaataattgtac--aaatatcattactc 7420817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 682 - 715
Target Start/End: Complemental strand, 8934506 - 8934473
Alignment:
Q  682 tatattgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||| |||||||||    
T  8934506 tatattgtttttgaccaataagaaaagagaaaaa 8934473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Complemental strand, 21255754 - 21255705
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||| ||||||||||||||  || ||||| ||||||||    
T  21255754 attgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagtt 21255705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Original strand, 32966369 - 32966418
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||||| ||||||||||||| || |||||  |||||||    
T  32966369 attgtttttgaccaataaaaagagagaaaaatgaggttgtcacaaaagtt 32966418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Complemental strand, 34941889 - 34941840
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||||||||||||||||||||| |||| |  ||||| ||||||||    
T  34941889 attgtttttgaccaataagaagagagagaaatgaagttgtcataaaagtt 34941840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 725
Target Start/End: Complemental strand, 50777393 - 50777352
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    |||||||||| ||||||||||||||||||||| ||| |||||    
T  50777393 tattgtttttaaccaataagaagagagaaaaacaaggttgtc 50777352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Complemental strand, 51168737 - 51168688
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||| ||||||||||| ||||||||| || |||||| ||||||||    
T  51168737 attgtttttaaccaataagaaaagagaaaaaaaaaattgtcataaaagtt 51168688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 1e-19; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 30633783 - 30633713
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||| |||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||||||||||    
T  30633783 attgttcttgaccaataagaagagagaaaaataaggttgtcattaaagttatcataaaatagatgtacaaa 30633713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 687 - 768
Target Start/End: Original strand, 47683894 - 47683973
Alignment:
Q  687 tgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactc 768  Q
    ||||||||||||||||||||||||||| | ||| |||||| ||||||| ||||||||| | |||||  ||||||||||||||    
T  47683894 tgtttttgaccaataagaagagagaaagagaaggttgtctcaaaagttgtcacaaaatggttgtac--aaatatcattactc 47683973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 30400125 - 30400085
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  30400125 attgtttttgaccaataagaagagagaaaaacaagattgtc 30400085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 689 - 755
Target Start/End: Original strand, 44855357 - 44855423
Alignment:
Q  689 tttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||| |||||||||||||||||||||||||||||||   |||||| |||  |||| ||||||||||    
T  44855357 tttttaaccaataagaagagagaaaaataagattgtcactaaagttgtcatgaaattgatgtacaaa 44855423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 50280056 - 50279986
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||||||||| |||||||||||||||||| ||| ||||| | |||||| |||  |||| ||||||||||    
T  50280056 attgtttttgacaaataagaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaa 50279986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 685 - 734
Target Start/End: Complemental strand, 1031396 - 1031347
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||||||||||||||||| ||||||||||  ||||| ||||||||    
T  1031396 attgtttttgaccaataagaagaaagaaaaataaagttgtcataaaagtt 1031347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 685 - 722
Target Start/End: Complemental strand, 3069544 - 3069507
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagatt 722  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  3069544 attgtttttgaccaataagaagagagaaaaacaagatt 3069507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 11574656 - 11574696
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  11574656 attgtttttgaccaataagaagagagaaaattaaggttgtc 11574696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 13159763 - 13159803
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  13159763 attgtttttgaccaataagaagagagaaaaacaaggttgtc 13159803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 20714345 - 20714385
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  20714345 attgtttttgaccaataagaagatagaaaaataaggttgtc 20714385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 32931887 - 32931847
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  32931887 attgtttttgaccaataagaagagagaaaaacaaggttgtc 32931847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 36819058 - 36819098
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  36819058 attgtttttgaccaataagaagagagaaaaacaaggttgtc 36819098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 684 - 744
Target Start/End: Complemental strand, 46323085 - 46323025
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaat 744  Q
    |||||||||| |||||||||||||| |||||  ||| ||||| |||||||||||| |||||    
T  46323085 tattgtttttaaccaataagaagagggaaaatgaagtttgtcataaaagttatcataaaat 46323025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 689 - 741
Target Start/End: Original strand, 50657344 - 50657396
Alignment:
Q  689 tttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaa 741  Q
    ||||||||||||| ||| ||| ||||| ||||||||||||||||| |||||||    
T  50657344 tttttgaccaatatgaaaagacaaaaagaagattgtcttaaaagtaatcacaa 50657396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 54233470 - 54233430
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  54233470 attgtttttgaccaataagaagagagaaaaacaaggttgtc 54233430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 755
Target Start/End: Original strand, 11327209 - 11327280
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||||||||||||||||||||||||| ||| ||| |||||   |||||| |||  |||| ||||||||||    
T  11327209 tattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaa 11327280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 715
Target Start/End: Complemental strand, 34021433 - 34021402
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaa 715  Q
    ||||||||||||||||||||||||||||||||    
T  34021433 tattgtttttgaccaataagaagagagaaaaa 34021402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 743
Target Start/End: Original strand, 43460489 - 43460548
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaa 743  Q
    |||||||||||||||||||||||||||||||  |||  ||||  ||||||| ||||||||    
T  43460489 tattgtttttgaccaataagaagagagaaaatgaaggctgtcccaaaagttgtcacaaaa 43460548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 734
Target Start/End: Original strand, 21481865 - 21481915
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||||||||||| ||||||||||| ||| || |||||| |||||||    
T  21481865 tattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagtt 21481915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 755
Target Start/End: Original strand, 35756082 - 35756152
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||| ||||||||||||||||||||| ||  |||||   |||||| |||  |||||||||||||||    
T  35756082 attgtttttaaccaataagaagagagaaaaacaaagttgtcaccaaagttgtcatgaaatagatgtacaaa 35756152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 738
Target Start/End: Original strand, 37585532 - 37585586
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatca 738  Q
    |||||||||||||||||||||||||||||||   || |||||  |||||||||||    
T  37585532 tattgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttatca 37585586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 770
Target Start/End: Complemental strand, 43149312 - 43149229
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactcaa 770  Q
    |||||||||||||||||||||||||||| || ||| ||||   ||||||| |  |||||||| ||| |  ||||||||||||||||    
T  43149312 attgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttc--aaatatcattactcaa 43149229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 714
Target Start/End: Original strand, 44910805 - 44910835
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaa 714  Q
    |||||||||||||||||||||||||||||||    
T  44910805 tattgtttttgaccaataagaagagagaaaa 44910835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 714
Target Start/End: Complemental strand, 23906956 - 23906927
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaa 714  Q
    ||||||||||||||||||||||||||||||    
T  23906956 attgtttttgaccaataagaagagagaaaa 23906927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 718
Target Start/End: Original strand, 28263647 - 28263680
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataa 718  Q
    ||||||||||||||||||||||| ||||||||||    
T  28263647 attgtttttgaccaataagaagaaagaaaaataa 28263680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 714
Target Start/End: Original strand, 28884582 - 28884611
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaa 714  Q
    ||||||||||||||||||||||||||||||    
T  28884582 attgtttttgaccaataagaagagagaaaa 28884611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Complemental strand, 35376520 - 35376471
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||||| |||||||| |||| || ||||| ||||||||    
T  35376520 attgtttttgaccaataaaaagagagagaaatgaggttgtcataaaagtt 35376471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 42865004 - 42864975
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaa 713  Q
    ||||||||||||||||||||||||||||||    
T  42865004 tattgtttttgaccaataagaagagagaaa 42864975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Complemental strand, 44127161 - 44127112
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||| |||||| ||||||||||||||| || ||||| ||||||||    
T  44127161 attgtttttaaccaatgagaagagagaaaaatgaggttgtcataaaagtt 44127112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 686 - 755
Target Start/End: Complemental strand, 49114568 - 49114499
Alignment:
Q  686 ttgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||||||||||||||||||| ||||||||| |||| ||  |||| ||||||  ||||| |||| ||||    
T  49114568 ttgtttttgaccaataagaagaaagaaaaatatgattatcacaaaaattatcattaaataaatgtgcaaa 49114499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 714
Target Start/End: Original strand, 50652490 - 50652519
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaa 714  Q
    ||||||||||||||||||||||||||||||    
T  50652490 attgtttttgaccaataagaagagagaaaa 50652519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 684 - 768
Target Start/End: Original strand, 33511702 - 33511784
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactc 768  Q
    ||||||||||||||||||||||||||||| || ||  |||||  ||||||| ||||||||||| |||||  ||||||||||||||    
T  33511702 tattgtttttgaccaataagaagagagaagaagaatgttgtcccaaaagttttcacaaaatagttgtac--aaatatcattactc 33511784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 684 - 772
Target Start/End: Complemental strand, 13540879 - 13540793
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactcaatt 772  Q
    |||| |||||||  ||||||||| |||||||| |||||||||  |||||||||||| |||||| |||||  ||||||||||| ||||||    
T  13540879 tattctttttgattaataagaagcgagaaaaaaaagattgtcacaaaagttatcactaaatagttgtac--aaatatcattattcaatt 13540793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 684 - 772
Target Start/End: Original strand, 13683594 - 13683680
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactcaatt 772  Q
    |||| |||||||  ||||||||| |||||||| |||||||||  |||||||||||| |||||| |||||  ||||||||||| ||||||    
T  13683594 tattctttttgattaataagaagcgagaaaaaaaagattgtcacaaaagttatcactaaatagttgtac--aaatatcattattcaatt 13683680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 689 - 753
Target Start/End: Original strand, 5924916 - 5924980
Alignment:
Q  689 tttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtaca 753  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||| |||  |||| ||||||||    
T  5924916 tttttgaccaataagaagagagaaaaataaggttgtcatgaaagttgtcatcaaatggatgtaca 5924980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 689 - 753
Target Start/End: Original strand, 5925161 - 5925225
Alignment:
Q  689 tttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtaca 753  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||||| |||  |||| ||||||||    
T  5925161 tttttgaccaataagaatagagaaaaataaggttgtcataaaagttgtcatcaaatggatgtaca 5925225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 6825246 - 6825176
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||| ||||||||||||||||||||||||| ||| |   |||||| |||  |||||||||||||||    
T  6825246 attgtttttaaccaataagaagagagaaaaataaggttgacaccaaagttgtcaataaatagatgtacaaa 6825176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 30927900 - 30927830
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||||||||||| ||| |||||   |||||| |||  |||| ||||||||||    
T  30927900 attgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaa 30927830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 37562110 - 37562040
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||||||||||| ||| ||||| | |||||| |||  || | ||||||||||    
T  37562110 attgtttttgaccaataagaagagagaaaaacaaggttgtcatcaaagttgtcatcaattggatgtacaaa 37562040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 725
Target Start/End: Complemental strand, 7603001 - 7602960
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  7603001 tattgtttttgaccaataagaagagaaaaaaagaagattgtc 7602960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 2597129 - 2597089
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  2597129 attgtttttgaccaataagaagagagaaaaacaaggttgtc 2597089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 33817259 - 33817299
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  33817259 attgtttttgaccaataaaaagagagaaaaacaagattgtc 33817299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 743
Target Start/End: Complemental strand, 23138756 - 23138706
Alignment:
Q  692 ttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaa 743  Q
    ||||||||||||||||| ||| || ||||||||||||||| |||||||||||    
T  23138756 ttgaccaataagaagagtgaataagaagattgtcttaaaa-ttatcacaaaa 23138706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 685 - 724
Target Start/End: Original strand, 41273617 - 41273656
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgt 724  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  41273617 attgtttttgaccaataagaagagagaaaaacaaggttgt 41273656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 755
Target Start/End: Original strand, 14531723 - 14531793
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||||| || ||||||||||||||||||||||| ||||| | || ||| |||  | |||||||||||||    
T  14531723 attgttttagatcaataagaagagagaaaaataaggttgtcattaatgttgtcatgagatagatgtacaaa 14531793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 19723175 - 19723105
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||||||||| |||||||||||||||||| ||| |||||   |||||| |||  | |||||||||||||    
T  19723175 attgtttttgactaataagaagagagaaaaacaaggttgtcactaaagttgtcatgatatagatgtacaaa 19723105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 714
Target Start/End: Complemental strand, 20995028 - 20994998
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaa 714  Q
    |||||||||||||||||||||||||||||||    
T  20995028 tattgtttttgaccaataagaagagagaaaa 20994998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 32185635 - 32185605
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  32185635 attgtttttgaccaataagaagagagaaaaa 32185605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 718
Target Start/End: Original strand, 36015658 - 36015692
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataa 718  Q
    ||||||||||||||||||| |||||||||||||||    
T  36015658 tattgtttttgaccaataaaaagagagaaaaataa 36015692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 41293690 - 41293660
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  41293690 attgtttttgaccaataagaagagagaaaaa 41293660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 714
Target Start/End: Complemental strand, 43605639 - 43605609
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaa 714  Q
    |||||||||||||||||||||||||||||||    
T  43605639 tattgtttttgaccaataagaagagagaaaa 43605609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Original strand, 5359440 - 5359489
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||||| ||||||||||||  ||||||||  |||||||    
T  5359440 attgtttttgaccaataaaaagagagaaaaaagagattgtcacaaaagtt 5359489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 686 - 715
Target Start/End: Original strand, 7129636 - 7129665
Alignment:
Q  686 ttgtttttgaccaataagaagagagaaaaa 715  Q
    ||||||||||||||||||||||||||||||    
T  7129636 ttgtttttgaccaataagaagagagaaaaa 7129665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 722
Target Start/End: Complemental strand, 13267055 - 13267018
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagatt 722  Q
    ||||||||||||||||||||||||||||| || |||||    
T  13267055 attgtttttgaccaataagaagagagaaatattagatt 13267018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 734
Target Start/End: Complemental strand, 32234425 - 32234372
Alignment:
Q  681 ctatattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||| ||||||||| ||||||||||| || ||| ||||| ||||||||    
T  32234425 ctatattgttattgaccaatgagaagagagaataaaaaggttgtcctaaaagtt 32234372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 722
Target Start/End: Complemental strand, 39259024 - 39258987
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagatt 722  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  39259024 attgtttttgactaataagaagagagaaaaacaagatt 39258987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 725
Target Start/End: Original strand, 39359837 - 39359878
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||| ||||||| |||| |||||    
T  39359837 tattgtttttgaccaataagaagggagaaaagtaaggttgtc 39359878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 684 - 725
Target Start/End: Original strand, 25345439 - 25345480
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25345439 tattgtttttgaccaataagaagagagaaaaataagattgtc 25345480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 685 - 755
Target Start/End: Original strand, 12401294 - 12401364
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||||||||||||||| |||||   |||||| |||  |||| ||||||||||    
T  12401294 attgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtacaaa 12401364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 9596783 - 9596743
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  9596783 attgtttttgaccaataagaagagagaaaaacaagattgtc 9596743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 12512895 - 12512935
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  12512895 attgtttttgaccaataagaagagagaaaaacaagattgtc 12512935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 17489450 - 17489490
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  17489450 attgtttttgaccaataagaagagagaaaaacaagattgtc 17489490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 684 - 734
Target Start/End: Complemental strand, 41210484 - 41210434
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||||||||||||||||||||||||||  || ||||| ||||||||    
T  41210484 tattgtttttgaccaataagaagagagaaaaaggaggttgtcataaaagtt 41210434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 9594580 - 9594620
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  9594580 attgtttttgaccaataagaagagagagaaataaggttgtc 9594620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 15622146 - 15622186
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  15622146 attgtttttgaccaataagaagagagaaaaacaaggttgtc 15622186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 682 - 718
Target Start/End: Complemental strand, 15917998 - 15917962
Alignment:
Q  682 tatattgtttttgaccaataagaagagagaaaaataa 718  Q
    |||||||||||||||||||||||||||||| ||||||    
T  15917998 tatattgtttttgaccaataagaagagagagaaataa 15917962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 22920461 - 22920421
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  22920461 attgtttttgaccaataagaagagagaaaaacaaggttgtc 22920421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 28501719 - 28501759
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  28501719 attgtttttgaccaataagaagagagaaaaacaaggttgtc 28501759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 33823663 - 33823623
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  33823663 attgtttttgaccaataagaagagagaaaaacaaggttgtc 33823623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 755
Target Start/End: Complemental strand, 35616771 - 35616700
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||||||||| || ||| |||||  |||| ||||  |||||||| ||| ||||    
T  35616771 tattgtttttgaccaataagaagagagaacaacaaggttgtcccaaaatttataccaaaatagttgttcaaa 35616700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 714
Target Start/End: Original strand, 1760462 - 1760492
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaa 714  Q
    |||||||||||||||||||||||||||||||    
T  1760462 tattgtttttgaccaataagaagagagaaaa 1760492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Original strand, 2051028 - 2051058
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  2051028 attgtttttgaccaataagaagagagaaaaa 2051058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Original strand, 7080616 - 7080646
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  7080616 attgtttttgaccaataagaagagagaaaaa 7080646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Original strand, 19271961 - 19271991
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  19271961 attgtttttgaccaataagaagagagaaaaa 19271991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 30574346 - 30574316
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  30574346 attgtttttgaccaataagaagagagaaaaa 30574316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 734
Target Start/End: Complemental strand, 31626046 - 31625996
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||| |||||||||||| ||||||||||| |||||  ||||||||||||||    
T  31626046 tattttttttgaccaatgagaagagagaacaataaagttgtcttaaaagtt 31625996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 688 - 753
Target Start/End: Original strand, 16143602 - 16143667
Alignment:
Q  688 gtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtaca 753  Q
    ||||||||||||||||| |||||||| | | ||||||| | |||||| |||  |||||||||||||    
T  16143602 gtttttgaccaataagatgagagaaacacatgattgtcatcaaagttgtcattaaatagatgtaca 16143667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 725
Target Start/End: Original strand, 22653740 - 22653781
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    |||| |||||||||||| ||||||||||| ||||||||||||    
T  22653740 tattatttttgaccaatgagaagagagaacaataagattgtc 22653781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 685 - 753
Target Start/End: Complemental strand, 32365636 - 32365568
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtaca 753  Q
    |||||||||||||||||| |||||||||||||||  || || | |||||||||| ||||||||||||||    
T  32365636 attgtttttgaccaataaaaagagagaaaaataatgttatcatcaaagttatcataaaatagatgtaca 32365568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 2193778 - 2193708
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||||||||||| ||||||||| | |||||| |||  || | ||||||||||    
T  2193778 attgtttttgaccaataagaagagagaaaaacaagattgtcatcaaagttgtcatcaattggatgtacaaa 2193708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 53384310 - 53384241
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||||||||||| || ||||||   |||||||||| ||||| ||||||||||    
T  53384310 attgtttttgaccaataagaagagagaaaaacaa-attgtcactaaagttatcataaaatggatgtacaaa 53384241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 685 - 738
Target Start/End: Original strand, 25936342 - 25936395
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatca 738  Q
    ||||||||||||||||||||| ||||||||| |||||||||  |||||||||||    
T  25936342 attgtttttgaccaataagaaaagagaaaaacaagattgtcacaaaagttatca 25936395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 688 - 768
Target Start/End: Original strand, 34259931 - 34260009
Alignment:
Q  688 gtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactc 768  Q
    |||||||||||||||||||||||||||| ||| |||||  ||||||| |||| |||| | |||||  ||||||||||||||    
T  34259931 gtttttgaccaataagaagagagaaaaagaagtttgtcacaaaagttgtcaccaaatggttgtac--aaatatcattactc 34260009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 31221515 - 31221555
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  31221515 attgtttttgaccaataagaagagagaaaaacaagattgtc 31221555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 731
Target Start/End: Original strand, 18634803 - 18634849
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaa 731  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||||    
T  18634803 attgttttttatcaataagaagagagaaaaataaggttgtcttaaaa 18634849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 755
Target Start/End: Original strand, 24235422 - 24235492
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||||||||||||||||||||||||||| ||| ||||||   |||||| |||  |||| ||||||||||    
T  24235422 attgtttttgaccaataagaagagagaaaattaaaattgtcactaaagttgtcatgaaatggatgtacaaa 24235492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 44368171 - 44368101
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||||||||| |||||||||||||||||||||| |||||   |||||| |||  |||| ||||||||||    
T  44368171 attgtttttgacaaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtacaaa 44368101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 751
Target Start/End: Complemental strand, 46480475 - 46480409
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgta 751  Q
    |||||||||||||||||| || |||||||||||| |||||| | |||||| ||| | ||||||||||    
T  46480475 attgtttttgaccaataaaaaaagagaaaaataaaattgtcattaaagttgtcatagaatagatgta 46480409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 689 - 746
Target Start/End: Original strand, 50383104 - 50383161
Alignment:
Q  689 tttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatag 746  Q
    |||||||||||||| |||| |||||||||||||||| ||||||  | |||||||||||    
T  50383104 tttttgaccaataaaaagaaagaaaaataagattgttttaaaaaatctcacaaaatag 50383161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 3223091 - 3223131
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  3223091 attgtttttgaccaataagaagagagaaaaagaaggttgtc 3223131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 5208296 - 5208256
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  5208296 attgtttttgaccaataagaagagagaaaaacaaggttgtc 5208256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 20056484 - 20056524
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  20056484 attgtttttgaccaataagaagagagaaaagcaagattgtc 20056524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 27001378 - 27001338
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  27001378 attgtttttgaccaataagaagagagaaaaacaaggttgtc 27001338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 32901431 - 32901471
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  32901431 attgtttttgaccaataaaaagagagaaaaacaagattgtc 32901471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 47106013 - 47106053
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  47106013 attgtttttgaccaataagaagagagaaaaacaaggttgtc 47106053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 51377262 - 51377222
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  51377262 attgtttttgaccaataagaagagagaaaaacaaggttgtc 51377222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 739
Target Start/End: Original strand, 6686147 - 6686202
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcac 739  Q
    |||||||||||||||||||||||||||||||   ||||||||  |||| |||||||    
T  6686147 tattgtttttgaccaataagaagagagaaaagatagattgtcacaaaaattatcac 6686202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 7037453 - 7037383
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||||||||||||||||||| |||||||| ||| |||||   |||||| |||   ||||||||||||||    
T  7037453 attgtttttgaccaataagaagggagaaaaacaaggttgtccctaaagttgtcatggaatagatgtacaaa 7037383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 8026733 - 8026703
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  8026733 attgtttttgaccaataagaagagagaaaaa 8026703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 13267447 - 13267417
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  13267447 attgtttttgaccaataagaagagagaaaaa 13267417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 738
Target Start/End: Complemental strand, 25241847 - 25241793
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatca 738  Q
    ||||||||||||| ||||| |||||||||||| |||||||||  |||| ||||||    
T  25241847 tattgtttttgacaaataaaaagagagaaaaagaagattgtcacaaaaattatca 25241793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 730
Target Start/End: Original strand, 31318849 - 31318895
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaa 730  Q
    |||||||||| |||||| ||||||||||| ||||| |||||||||||    
T  31318849 tattgtttttaaccaatgagaagagagaagaataaaattgtcttaaa 31318895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 714
Target Start/End: Complemental strand, 36364755 - 36364725
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaa 714  Q
    |||||||||||||||||||||||||||||||    
T  36364755 tattgtttttgaccaataagaagagagaaaa 36364725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Original strand, 41495115 - 41495145
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  41495115 attgtttttgaccaataagaagagagaaaaa 41495145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 52669578 - 52669508
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||| |||||||||| |||||||||||| |||||||||   |||||  ||| ||||| ||||||||||    
T  52669578 attgtttctgaccaataaaaagagagaaaaacaagattgtcactaaagtggtcataaaatggatgtacaaa 52669508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Complemental strand, 5234440 - 5234391
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||||| |||||||||||| || ||||||  |||||||    
T  5234440 attgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagtt 5234391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 725
Target Start/End: Original strand, 8456004 - 8456045
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||| |||||||||||| ||| |||||    
T  8456004 tattgtttttgaccaataaaaagagagaaaaagaaggttgtc 8456045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Complemental strand, 18874893 - 18874844
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||| ||||||||||||||  || ||||| ||||||||    
T  18874893 attgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagtt 18874844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 773
Target Start/End: Original strand, 22893970 - 22894056
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactcaatta 773  Q
    |||||||||||||||||| ||||||| | || |||||||||  ||||||| |  ||||| || ||| |  |||||||||||||||||||    
T  22893970 attgtttttgaccaataaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttc--aaatatcattactcaatta 22894056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 773
Target Start/End: Original strand, 22945638 - 22945724
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactcaatta 773  Q
    |||||||||||||||||| ||||||| | || |||||||||  ||||||| |  ||||| || ||| |  |||||||||||||||||||    
T  22945638 attgtttttgaccaataaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttc--aaatatcattactcaatta 22945724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Complemental strand, 33860515 - 33860466
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||||| ||||||||||||| || ||||| | ||||||    
T  33860515 attgtttttgaccaataataagagagaaaaatgaggttgtcatcaaagtt 33860466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Original strand, 43982999 - 43983048
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||| ||||||||||| ||  |||||||| ||||||||    
T  43982999 attgtttttgaccaatgagaagagagaacaactagattgtcctaaaagtt 43983048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 725
Target Start/End: Complemental strand, 44272782 - 44272741
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||| ||||||||||||  ||||||||    
T  44272782 tattgtttttgaccaataataagagagaaaaaggagattgtc 44272741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 685 - 755
Target Start/End: Original strand, 24775 - 24845
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||| ||||||||||||||||||||||||| |||||   ||| ||||||  |||||||||||||||    
T  24775 attgtttttaaccaataagaagagagaaaaataaggttgtcactaaaattatcatgaaatagatgtacaaa 24845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 684 - 734
Target Start/End: Complemental strand, 24491647 - 24491597
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  24491647 tattgtttttaaccaataagaagagagaacaataagattgtctcaaaagtt 24491597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 27307214 - 27307174
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  27307214 attgtttttgaccaataagaagagagaaaaataaggttgtc 27307174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 684 - 744
Target Start/End: Original strand, 32755779 - 32755839
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaat 744  Q
    ||||||||||||||||| | ||||||||||||||||  ||||| ||||||| |||||||||    
T  32755779 tattgtttttgaccaatcaaaagagagaaaaataaggctgtctcaaaagttgtcacaaaat 32755839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 751
Target Start/End: Complemental strand, 3299074 - 3299008
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgta 751  Q
    ||||||||| ||||||||||||||||| |||||||||||||   ||| ||||||  |||||||||||    
T  3299074 attgtttttaaccaataagaagagagagaaataagattgtcaccaaaattatcattaaatagatgta 3299008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 755
Target Start/End: Original strand, 37966458 - 37966528
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||||||||||| ||| |||||   |||||| |||  |||| ||||||||||    
T  37966458 attgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaa 37966528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 44484625 - 44484555
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||||||||||| ||  |||||   |||||| ||| ||||| ||||||||||    
T  44484625 attgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaattgatgtacaaa 44484555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 768
Target Start/End: Complemental strand, 42141580 - 42141498
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactc 768  Q
    |||||||||||| ||||||||| ||||||||| ||| |||||   ||||||||||  |||||||||| |  ||||||||||||||    
T  42141580 tattgtttttgatcaataagaatagagaaaaacaaggttgtcaacaaagttatcatcaaatagatgtcc--aaatatcattactc 42141498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 753
Target Start/End: Original strand, 17826149 - 17826217
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtaca 753  Q
    ||||||||| || |||||||||||||||||| ||| ||||| | |||||| ||  ||||||||||||||    
T  17826149 attgttttttactaataagaagagagaaaaacaaggttgtcatgaaagttgtcttaaaatagatgtaca 17826217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 23048052 - 23048012
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  23048052 attgtttttgaccaataagaagagagaaaaacaaggttgtc 23048012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 36383564 - 36383604
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  36383564 attgtttttgaccaataagaagagagaaaaacaaggttgtc 36383604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 715
Target Start/End: Original strand, 4432428 - 4432459
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaa 715  Q
    ||||||||||||||||||||||||||||||||    
T  4432428 tattgtttttgaccaataagaagagagaaaaa 4432459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 736
Target Start/End: Original strand, 31009665 - 31009720
Alignment:
Q  681 ctatattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttat 736  Q
    ||||||||||||||| ||||||||||||||||||  ||  || |||||||||||||    
T  31009665 ctatattgtttttgatcaataagaagagagaaaatgaaagttatcttaaaagttat 31009720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 690 - 725
Target Start/End: Complemental strand, 34144516 - 34144481
Alignment:
Q  690 ttttgaccaataagaagagagaaaaataagattgtc 725  Q
    |||||||||||||||||||||||||| |||||||||    
T  34144516 ttttgaccaataagaagagagaaaaacaagattgtc 34144481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 692 - 743
Target Start/End: Complemental strand, 41749629 - 41749579
Alignment:
Q  692 ttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaa 743  Q
    ||||||||||||||||| ||| || ||||||||||||||| |||||||||||    
T  41749629 ttgaccaataagaagagtgaataagaagattgtcttaaaa-ttatcacaaaa 41749579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Original strand, 5962740 - 5962770
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  5962740 attgtttttgaccaataagaagagagaaaaa 5962770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 734
Target Start/End: Original strand, 16463393 - 16463443
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||||||||||||||||||||| | || |||||||||  |||||||    
T  16463393 tattgtttttgaccaataagaagagagcacaacaagattgtcccaaaagtt 16463443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 30487421 - 30487391
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  30487421 attgtttttgaccaataagaagagagaaaaa 30487391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 36909812 - 36909782
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  36909812 attgtttttgaccaataagaagagagaaaaa 36909782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Original strand, 6365288 - 6365337
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||||| ||||||||||||  || ||||| ||||||||    
T  6365288 attgtttttgaccaataaaaagagagaaaaaagaggttgtcataaaagtt 6365337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 689 - 734
Target Start/End: Complemental strand, 6742375 - 6742330
Alignment:
Q  689 tttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||||||||||||||||| ||| |||||||||  |||||||    
T  6742375 tttttgaccaataagaagagagagaaagaagattgtcacaaaagtt 6742330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 689 - 734
Target Start/End: Original strand, 20974460 - 20974505
Alignment:
Q  689 tttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||||||||||||||||||||| || |||||| | ||||||    
T  20974460 tttttgaccaataagaagagagaaaaacaaaattgtcattaaagtt 20974505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 718
Target Start/End: Original strand, 33857319 - 33857352
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataa 718  Q
    ||||||||||||||||||||||| ||||||||||    
T  33857319 attgtttttgaccaataagaagacagaaaaataa 33857352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 768
Target Start/End: Original strand, 35518376 - 35518458
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactc 768  Q
    ||||||||||||||||||||||||||||| || ||  |||||  ||||||| |  |||||||| ||| |  ||||||||||||||    
T  35518376 tattgtttttgaccaataagaagagagaacaacaaagttgtcccaaaagttgtatcaaaatagttgttc--aaatatcattactc 35518458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 37109342 - 37109313
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaa 713  Q
    ||||||||||||||||||||||||||||||    
T  37109342 tattgtttttgaccaataagaagagagaaa 37109313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Complemental strand, 37631336 - 37631287
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||| ||||||||||||||  || ||||| ||||||||    
T  37631336 attgtttttgaccaatgagaagagagaaaaaagaggttgtcataaaagtt 37631287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 684 - 739
Target Start/End: Complemental strand, 204417 - 204362
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcac 739  Q
    ||||||||||||||||||||||||||||||||  ||||||||  ||||||| ||||    
T  204417 tattgtttttgaccaataagaagagagaaaaagtagattgtcacaaaagttgtcac 204362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000009; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 684 - 755
Target Start/End: Original strand, 30201360 - 30201431
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||| |||||||||||||| |||||||||||||||||||||| | |||||| ||| | |||  |||||||||    
T  30201360 tattatttttgaccaataaaaagagagaaaaataagattgtcattaaagttgtcatagaatgtatgtacaaa 30201431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 755
Target Start/End: Original strand, 26041412 - 26041482
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||||||||||| ||  |||||   |||||| ||| ||||| ||||||||||    
T  26041412 attgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaatggatgtacaaa 26041482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 755
Target Start/End: Original strand, 44511241 - 44511311
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||| ||||||||| || ||||||   |||||| ||| ||||| ||||||||||    
T  44511241 attgtttttgaccaataagaaaagagaaaaacaaaattgtcactaaagttgtcataaaatggatgtacaaa 44511311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 685 - 755
Target Start/End: Complemental strand, 48057466 - 48057396
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||||||||||||| || ||||||   |||| | |||  |||||||||||||||    
T  48057466 attgtttttgaccaataagaagagagaaaaacaaaattgtcactaaagatgtcatcaaatagatgtacaaa 48057396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 753
Target Start/End: Complemental strand, 37149445 - 37149376
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtaca 753  Q
    |||||||||| ||||||||||||| ||||||| ||| ||||| |||||||| ||   |||||||||||||    
T  37149445 tattgttttttaccaataagaagaaagaaaaacaaggttgtcataaaagttgtcttgaaatagatgtaca 37149376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 685 - 769
Target Start/End: Original strand, 42431825 - 42431907
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactca 769  Q
    ||||||||||||||||||||||||||||||| ||| |||||   |||||| |||   ||| |||||||  |||||||||||||||    
T  42431825 attgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtac--aaatatcattactca 42431907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 689 - 768
Target Start/End: Complemental strand, 43255532 - 43255455
Alignment:
Q  689 tttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactc 768  Q
    |||||||| ||||||||||||||||| ||||||||||   ||| ||||||  || |||||||||  ||||||||||||||    
T  43255532 tttttgactaataagaagagagaaaagtaagattgtcaccaaaattatcatcaattagatgtac--aaatatcattactc 43255455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 44175647 - 44175687
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  44175647 attgtttttgaccaataagaagaaagaaaaagaagattgtc 44175687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 690 - 725
Target Start/End: Complemental strand, 19880196 - 19880161
Alignment:
Q  690 ttttgaccaataagaagagagaaaaataagattgtc 725  Q
    |||||||| |||||||||||||||||||||||||||    
T  19880196 ttttgacccataagaagagagaaaaataagattgtc 19880161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 685 - 771
Target Start/End: Complemental strand, 25614790 - 25614706
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactcaat 771  Q
    ||||||||| ||||||||||||||||||||| ||| |||||   ||| || |||  || |||||||||  |||||||||||||||||    
T  25614790 attgttttttaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattagatgtac--aaatatcattactcaat 25614706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 715
Target Start/End: Original strand, 32315927 - 32315958
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaa 715  Q
    ||||||||||||||||||||||||||||||||    
T  32315927 tattgtttttgaccaataagaagagagaaaaa 32315958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 755
Target Start/End: Original strand, 33050284 - 33050355
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||||||||||||||||||||||||| ||| ||| |||||   |||||| |||  |||| ||||||||||    
T  33050284 tattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaa 33050355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 685 - 744
Target Start/End: Complemental strand, 49014368 - 49014309
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaat 744  Q
    |||||||||||||||||| || ||||||||| | | ||||| |||||||| |||||||||    
T  49014368 attgtttttgaccaataaaaatagagaaaaagatgtttgtcctaaaagttgtcacaaaat 49014309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 738
Target Start/End: Complemental strand, 7410554 - 7410501
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatca 738  Q
    |||||||||||||| ||||||||||| |||||||| ||||||  |||||||||||    
T  7410554 tattgtttttgaccgataagaagaga-aaaaataaaattgtcacaaaagttatca 7410501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 682 - 755
Target Start/End: Complemental strand, 8235693 - 8235619
Alignment:
Q  682 tatattgtttttgaccaa-taagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||||||||||| ||||| |||||||||||||||| |  |||||| | ||||||||||  |||||||||| ||||    
T  8235693 tatattgttttttaccaaataagaagagagaaaaacataattgtcatcaaagttatcattaaatagatgtgcaaa 8235619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 687 - 725
Target Start/End: Original strand, 8326229 - 8326267
Alignment:
Q  687 tgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  8326229 tgtttttgatcaataagaagagagaaaaatacgattgtc 8326267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 27164806 - 27164776
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  27164806 attgtttttgaccaataagaagagagaaaaa 27164776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 35005068 - 35005038
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  35005068 attgtttttgaccaataagaagagagaaaaa 35005038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 734
Target Start/End: Original strand, 44185277 - 44185327
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||||||||||| ||||||||||| ||| || |||||| |||||||    
T  44185277 tattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagtt 44185327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 768
Target Start/End: Original strand, 7295568 - 7295650
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcattactc 768  Q
    ||||||||||||||||| ||||||||||| || ||| ||||   ||||||| || ||||| || |||||  ||||||||||||||    
T  7295568 tattgtttttgaccaatgagaagagagaataacaaggttgttccaaaagttgtctcaaaaaagttgtac--aaatatcattactc 7295650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Original strand, 40077357 - 40077406
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||||||||||||||||| |||||||  || ||||| ||||||||    
T  40077357 attgtttttgaccaataagaagaaagaaaaaggaggttgtcataaaagtt 40077406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 765
Target Start/End: Original strand, 41186326 - 41186408
Alignment:
Q  681 ctatattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaaaatatcatta 765  Q
    ||||||| |||||| |||||||||||||| ||||| || |||||  || || || ||||||||||| |||  |||||||||||||    
T  41186326 ctatattatttttgtccaataagaagagataaaaagaatattgttctacaaattgtcacaaaatagttgt--aaaaatatcatta 41186408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 725
Target Start/End: Original strand, 41227176 - 41227217
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    |||||||||||||||||||||  ||||||||||||| |||||    
T  41227176 tattgtttttgaccaataagagtagagaaaaataaggttgtc 41227217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 725
Target Start/End: Complemental strand, 42118667 - 42118626
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||| || ||| |||||    
T  42118667 tattgtttttgaccaataagaagagagaagaagaaggttgtc 42118626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000009; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 684 - 755
Target Start/End: Complemental strand, 3339469 - 3339398
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||| |||||||||||| |||||||||   |||||| |||  |||| ||||||||||    
T  3339469 tattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaa 3339398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 681 - 724
Target Start/End: Complemental strand, 24881751 - 24881708
Alignment:
Q  681 ctatattgtttttgaccaataagaagagagaaaaataagattgt 724  Q
    ||||||| |||||||| |||||||||||||||||||||||||||    
T  24881751 ctatattctttttgactaataagaagagagaaaaataagattgt 24881708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 689 - 734
Target Start/End: Complemental strand, 9188911 - 9188866
Alignment:
Q  689 tttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    |||||||||||||||||||||||||||| ||||| || ||||||||    
T  9188911 tttttgaccaataagaagagagaaaaatgagattatcataaaagtt 9188866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Original strand, 1803971 - 1804011
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  1803971 attgtttttgaccaataagaagagagaaaaacaaggttgtc 1804011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 755
Target Start/End: Original strand, 27334965 - 27335036
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||| |||||||||||||| |||||||||||| ||| ||||| | |||||| |||  |||| ||||||||||    
T  27334965 tattatttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaa 27335036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 755
Target Start/End: Original strand, 27395705 - 27395776
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    |||| |||||||||||||| |||||||||||| ||| ||||| | |||||| |||  |||| ||||||||||    
T  27395705 tattatttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaa 27395776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 697 - 743
Target Start/End: Original strand, 363527 - 363572
Alignment:
Q  697 caataagaagagagaaaaataagattgtcttaaaagttatcacaaaa 743  Q
    ||||||||||||||||||| || ||||||||||||||| ||||||||    
T  363527 caataagaagagagaaaaagaa-attgtcttaaaagttttcacaaaa 363572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 734
Target Start/End: Complemental strand, 7304075 - 7304025
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||||||||||| ||||||||||| ||| || |||||| |||||||    
T  7304075 tattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagtt 7304025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 17902661 - 17902631
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  17902661 attgtttttgaccaataagaagagagaaaaa 17902631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 734
Target Start/End: Complemental strand, 23653862 - 23653813
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagtt 734  Q
    ||||||||||||| || ||||||||||||||| || ||||| ||||||||    
T  23653862 attgtttttgacctatgagaagagagaaaaatgaggttgtcataaaagtt 23653813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 725
Target Start/End: Complemental strand, 683 - 642
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  683 tattgtttttgaccaataagaagagaaaaaaagaagattgtc 642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 725
Target Start/End: Complemental strand, 147225 - 147185
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtc 725  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  147225 attgtttttgaccaataagaagagagaaaaacaaggttgtc 147185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 684 - 730
Target Start/End: Complemental strand, 4821 - 4775
Alignment:
Q  684 tattgtttttgaccaataagaagagagaaaaataagattgtcttaaa 730  Q
    |||||||||| |||||| ||||||||||| ||||| |||||||||||    
T  4821 tattgtttttaaccaatgagaagagagaagaataaaattgtcttaaa 4775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 715
Target Start/End: Complemental strand, 1465 - 1435
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaa 715  Q
    |||||||||||||||||||||||||||||||    
T  1465 attgtttttgaccaataagaagagagaaaaa 1435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 755
Target Start/End: Original strand, 88910 - 88980
Alignment:
Q  685 attgtttttgaccaataagaagagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaaa 755  Q
    ||||||||||||||||||||| ||| ||||||||| |||||   ||||||||||  | || ||||||||||    
T  88910 attgtttttgaccaataagaaaagaaaaaaataaggttgtcactaaagttatcatgagatggatgtacaaa 88980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 705 - 754
Target Start/End: Original strand, 89446 - 89495
Alignment:
Q  705 agagagaaaaataagattgtcttaaaagttatcacaaaatagatgtacaa 754  Q
    ||||||||||| ||| ||||| ||||| |||||||||||||| |||||||    
T  89446 agagagaaaaaaaagtttgtcataaaaattatcacaaaatagttgtacaa 89495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University