View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11793_low_9 (Length: 553)

Name: NF11793_low_9
Description: NF11793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11793_low_9
NF11793_low_9
[»] scaffold0384 (3 HSPs)
scaffold0384 (1-377)||(4385-4760)
scaffold0384 (443-547)||(4826-4930)
scaffold0384 (102-167)||(5643-5709)
[»] scaffold0079 (4 HSPs)
scaffold0079 (62-372)||(6963-7274)
scaffold0079 (501-547)||(7270-7316)
scaffold0079 (16-99)||(6812-6897)
scaffold0079 (102-167)||(7857-7921)
[»] chr1 (48 HSPs)
chr1 (1-99)||(27794360-27794460)
chr1 (1-104)||(5330417-5330522)
chr1 (1-99)||(7112677-7112776)
chr1 (1-99)||(7112496-7112596)
chr1 (1-99)||(31532445-31532545)
chr1 (1-99)||(4646759-4646860)
chr1 (1-99)||(28724484-28724585)
chr1 (1-99)||(46561388-46561487)
chr1 (1-104)||(46136083-46136188)
chr1 (1-95)||(29018551-29018647)
chr1 (1-60)||(6540873-6540931)
chr1 (1-48)||(9043629-9043676)
chr1 (4-99)||(16698871-16698969)
chr1 (1-99)||(16699059-16699160)
chr1 (1-99)||(42736777-42736876)
chr1 (1-99)||(28410916-28411017)
chr1 (1-109)||(35034250-35034360)
chr1 (1-84)||(28411102-28411187)
chr1 (3-58)||(27794550-27794606)
chr1 (1-48)||(5330609-5330656)
chr1 (1-99)||(13154581-13154682)
chr1 (4-99)||(21853418-21853516)
chr1 (1-82)||(5348324-5348406)
chr1 (18-99)||(9043450-9043532)
chr1 (1-99)||(47022023-47022124)
chr1 (1-99)||(21853954-21854054)
chr1 (1-99)||(44200329-44200429)
chr1 (1-50)||(51904032-51904081)
chr1 (3-88)||(6607186-6607273)
chr1 (2-88)||(24004708-24004794)
chr1 (1-88)||(35167963-35168052)
chr1 (1-99)||(50596116-50596213)
chr1 (10-89)||(51809768-51809849)
chr1 (1-42)||(47021898-47021939)
chr1 (3-84)||(12277410-12277493)
chr1 (1-98)||(15336808-15336907)
chr1 (46-89)||(17746480-17746523)
chr1 (1-99)||(36343156-36343258)
chr1 (1-84)||(36343341-36343424)
chr1 (12-84)||(15790438-15790512)
chr1 (1-42)||(4646948-4646989)
chr1 (18-99)||(10027948-10028032)
chr1 (1-42)||(31532319-31532359)
chr1 (1-37)||(2059260-2059296)
chr1 (56-104)||(21853557-21853605)
chr1 (18-99)||(22604634-22604717)
chr1 (1-52)||(40498071-40498123)
chr1 (1-29)||(42736663-42736691)
[»] chr4 (65 HSPs)
chr4 (1-96)||(17313015-17313110)
chr4 (1-99)||(22272932-22273032)
chr4 (1-104)||(21798521-21798625)
chr4 (1-99)||(17289931-17290031)
chr4 (129-294)||(41074761-41074926)
chr4 (4-99)||(21780124-21780220)
chr4 (1-97)||(39868472-39868570)
chr4 (1-99)||(17289744-17289845)
chr4 (1-99)||(16493520-16493620)
chr4 (1-99)||(39868652-39868751)
chr4 (1-99)||(40696163-40696260)
chr4 (1-99)||(21780310-21780411)
chr4 (1-99)||(21798334-21798435)
chr4 (1-99)||(56467602-56467703)
chr4 (1-50)||(9001497-9001546)
chr4 (1-50)||(16493676-16493725)
chr4 (1-99)||(18454194-18454296)
chr4 (1-88)||(6439198-6439287)
chr4 (1-99)||(44519459-44519560)
chr4 (4-58)||(44561496-44561550)
chr4 (1-55)||(45900740-45900794)
chr4 (1-88)||(9791599-9791688)
chr4 (3-99)||(18454385-18454485)
chr4 (1-95)||(47320992-47321087)
chr4 (1-98)||(11563296-11563394)
chr4 (1-99)||(18320651-18320751)
chr4 (17-99)||(38656026-38656110)
chr4 (1-50)||(56467468-56467516)
chr4 (1-99)||(51396161-51396261)
chr4 (1-99)||(13334824-13334926)
chr4 (4-50)||(1386196-1386242)
chr4 (1-46)||(10682739-10682784)
chr4 (1-46)||(10896379-10896424)
chr4 (1-50)||(43751234-43751283)
chr4 (1-42)||(45900612-45900653)
chr4 (3-88)||(4431305-4431392)
chr4 (22-99)||(5401974-5402053)
chr4 (1-59)||(16482098-16482157)
chr4 (1-44)||(16482242-16482285)
chr4 (13-89)||(27450063-27450141)
chr4 (3-89)||(28292065-28292152)
chr4 (16-88)||(30966625-30966699)
chr4 (1-99)||(43318576-43318675)
chr4 (56-99)||(50138490-50138533)
chr4 (1-99)||(51965374-51965472)
chr4 (2-89)||(13032899-13032988)
chr4 (3-88)||(35370346-35370432)
chr4 (1-50)||(44519648-44519698)
chr4 (16-50)||(55363741-55363775)
chr4 (1-42)||(10682872-10682913)
chr4 (1-42)||(10896512-10896553)
chr4 (23-108)||(21246469-21246557)
chr4 (56-89)||(47629209-47629242)
chr4 (1-50)||(56216899-56216948)
chr4 (3-99)||(550675-550774)
chr4 (3-88)||(1952748-1952835)
chr4 (30-99)||(11563501-11563572)
chr4 (4-84)||(13910808-13910891)
chr4 (1-29)||(18320536-18320564)
chr4 (56-100)||(27579515-27579559)
chr4 (9-88)||(34318600-34318680)
chr4 (56-104)||(49300734-49300782)
chr4 (56-88)||(50719921-50719953)
chr4 (63-99)||(50727592-50727628)
chr4 (63-99)||(50735606-50735642)
[»] chr7 (58 HSPs)
chr7 (1-104)||(13279372-13279477)
chr7 (4-99)||(21298016-21298113)
chr7 (1-100)||(43251514-43251612)
chr7 (1-104)||(38193149-38193254)
chr7 (1-83)||(19410707-19410791)
chr7 (1-104)||(39580123-39580226)
chr7 (1-105)||(19979647-19979752)
chr7 (1-99)||(31186670-31186771)
chr7 (1-99)||(1693407-1693506)
chr7 (1-99)||(23371635-23371735)
chr7 (4-99)||(23784586-23784681)
chr7 (1-99)||(45163915-45164015)
chr7 (13-99)||(23371451-23371538)
chr7 (1-84)||(24204830-24204916)
chr7 (1-99)||(13279186-13279287)
chr7 (2-99)||(26050361-26050458)
chr7 (2-99)||(26059720-26059817)
chr7 (1-99)||(35913238-35913339)
chr7 (1-77)||(1693243-1693320)
chr7 (1-96)||(13286635-13286732)
chr7 (1-99)||(19979833-19979933)
chr7 (1-99)||(38192964-38193063)
chr7 (1-99)||(48104683-48104783)
chr7 (1-96)||(43251699-43251797)
chr7 (4-105)||(19272215-19272317)
chr7 (1-99)||(19272405-19272504)
chr7 (1-99)||(16902292-16902391)
chr7 (1-104)||(19410506-19410613)
chr7 (4-83)||(35097723-35097803)
chr7 (1-67)||(35913084-35913152)
chr7 (1-99)||(13286819-13286921)
chr7 (1-99)||(16902108-16902206)
chr7 (1-50)||(23314776-23314826)
chr7 (3-84)||(24374285-24374367)
chr7 (1-99)||(24845640-24845741)
chr7 (1-50)||(5021735-5021784)
chr7 (16-99)||(15037376-15037461)
chr7 (1-50)||(26930687-26930736)
chr7 (130-182)||(715301-715353)
chr7 (1-99)||(44414035-44414132)
chr7 (1-42)||(24205306-24205348)
chr7 (1-42)||(24206824-24206866)
chr7 (1-50)||(26930820-26930870)
chr7 (59-101)||(34731638-34731680)
chr7 (1-50)||(39119065-39119115)
chr7 (1-99)||(26050177-26050275)
chr7 (1-99)||(26059536-26059634)
chr7 (1-99)||(31186859-31186961)
chr7 (1-50)||(4518055-4518105)
chr7 (1-98)||(39065386-39065483)
chr7 (2-99)||(21237304-21237400)
chr7 (4-84)||(22335477-22335558)
chr7 (1-42)||(23784768-23784808)
chr7 (3-50)||(3624141-3624189)
chr7 (16-84)||(4675944-4676012)
chr7 (1-99)||(12180790-12180890)
chr7 (63-99)||(24555920-24555956)
chr7 (18-98)||(45164091-45164174)
[»] chr8 (43 HSPs)
chr8 (1-99)||(27987299-27987398)
chr8 (1-99)||(28044601-28044700)
chr8 (1-99)||(14329555-14329655)
chr8 (1-99)||(27198146-27198247)
chr8 (1-98)||(29726109-29726206)
chr8 (1-50)||(7988978-7989027)
chr8 (1-99)||(8315939-8316037)
chr8 (1-97)||(34019079-34019177)
chr8 (1-99)||(25601903-25602002)
chr8 (1-99)||(43121082-43121181)
chr8 (1-99)||(27987484-27987581)
chr8 (1-99)||(28044786-28044883)
chr8 (1-50)||(4105235-4105284)
chr8 (1-50)||(7988845-7988894)
chr8 (1-99)||(12330335-12330435)
chr8 (1-99)||(38500285-38500386)
chr8 (16-99)||(960468-960552)
chr8 (1-99)||(960271-960373)
chr8 (3-99)||(25277663-25277761)
chr8 (9-105)||(43945165-43945263)
chr8 (1-42)||(26447538-26447579)
chr8 (1-42)||(27198330-27198371)
chr8 (3-111)||(36343135-36343244)
chr8 (1-98)||(8388117-8388219)
chr8 (1-99)||(40770533-40770628)
chr8 (18-99)||(3912454-3912535)
chr8 (1-50)||(4105102-4105150)
chr8 (4-99)||(4482047-4482143)
chr8 (1-50)||(14329429-14329478)
chr8 (3-88)||(15152245-15152333)
chr8 (23-99)||(29309750-29309829)
chr8 (12-88)||(18367039-18367118)
chr8 (5-49)||(34985174-34985218)
chr8 (3-84)||(5160310-5160393)
chr8 (4-84)||(11105788-11105870)
chr8 (1-50)||(25601766-25601816)
chr8 (1-46)||(12330521-12330566)
chr8 (1-42)||(33641087-33641127)
chr8 (1-40)||(2696666-2696703)
chr8 (18-104)||(3912253-3912341)
chr8 (13-76)||(13759490-13759554)
chr8 (3-88)||(19157943-19158030)
chr8 (16-88)||(23564115-23564186)
[»] chr5 (43 HSPs)
chr5 (1-99)||(31861493-31861593)
chr5 (1-96)||(20688801-20688897)
chr5 (9-104)||(40339500-40339595)
chr5 (1-99)||(33052819-33052919)
chr5 (1-110)||(31861681-31861793)
chr5 (1-99)||(37204935-37205035)
chr5 (1-99)||(38482320-38482420)
chr5 (1-99)||(29104446-29104545)
chr5 (1-99)||(35798638-35798738)
chr5 (1-99)||(9227039-9227140)
chr5 (7-99)||(12383005-12383099)
chr5 (1-99)||(21149055-21149155)
chr5 (1-99)||(24098437-24098535)
chr5 (1-97)||(21148805-21148900)
chr5 (1-99)||(24098619-24098718)
chr5 (1-58)||(42119244-42119300)
chr5 (133-189)||(8186023-8186079)
chr5 (1-98)||(20688985-20689082)
chr5 (1-43)||(39153579-39153621)
chr5 (1-58)||(22551703-22551759)
chr5 (1-98)||(22642127-22642221)
chr5 (1-101)||(26592321-26592425)
chr5 (1-99)||(20698475-20698575)
chr5 (11-99)||(22551524-22551615)
chr5 (1-105)||(39418906-39419013)
chr5 (1-99)||(40339333-40339433)
chr5 (18-89)||(4221940-4222011)
chr5 (1-99)||(12382829-12382928)
chr5 (1-99)||(33053004-33053102)
chr5 (1-99)||(711239-711341)
chr5 (1-84)||(29754066-29754150)
chr5 (4-50)||(35798512-35798558)
chr5 (3-88)||(16431516-16431601)
chr5 (1-42)||(36354739-36354779)
chr5 (34-99)||(12399574-12399641)
chr5 (56-104)||(30916480-30916528)
chr5 (3-99)||(9751633-9751731)
chr5 (4-88)||(10598332-10598418)
chr5 (45-99)||(15395546-15395600)
chr5 (1-99)||(24329471-24329572)
chr5 (4-84)||(28277420-28277501)
chr5 (1-99)||(12330856-12330956)
chr5 (1-40)||(33483080-33483120)
[»] chr2 (56 HSPs)
chr2 (1-99)||(28149621-28149721)
chr2 (1-99)||(3364516-3364616)
chr2 (1-99)||(30371387-30371487)
chr2 (1-98)||(28484547-28484646)
chr2 (1-99)||(16577304-16577402)
chr2 (1-99)||(28149435-28149536)
chr2 (1-98)||(29098022-29098120)
chr2 (1-99)||(17328094-17328194)
chr2 (1-99)||(37147553-37147653)
chr2 (1-76)||(1499068-1499145)
chr2 (1-99)||(38385937-38386035)
chr2 (1-99)||(85441-85542)
chr2 (1-99)||(38210866-38210966)
chr2 (5-99)||(18665677-18665775)
chr2 (1-99)||(22535456-22535554)
chr2 (1-99)||(17328280-17328380)
chr2 (1-48)||(28484414-28484461)
chr2 (1-47)||(23260375-23260421)
chr2 (1-99)||(37147740-37147841)
chr2 (1-99)||(38386117-38386214)
chr2 (1-50)||(1498939-1498988)
chr2 (22-99)||(19493424-19493503)
chr2 (1-99)||(22535638-22535738)
chr2 (3-89)||(5558234-5558321)
chr2 (1-99)||(19052127-19052228)
chr2 (15-89)||(39341326-39341400)
chr2 (1-50)||(9011809-9011858)
chr2 (1-50)||(16577168-16577217)
chr2 (4-99)||(29098207-29098303)
chr2 (1-99)||(85626-85724)
chr2 (3-42)||(9011941-9011980)
chr2 (1-99)||(3364329-3364428)
chr2 (2-55)||(25228014-25228067)
chr2 (1-42)||(37243481-37243522)
chr2 (1-42)||(39227982-39228023)
chr2 (56-99)||(11093979-11094022)
chr2 (25-99)||(12028200-12028275)
chr2 (9-89)||(18543969-18544051)
chr2 (56-99)||(22116157-22116200)
chr2 (16-83)||(24413775-24413842)
chr2 (1-44)||(25926943-25926986)
chr2 (56-99)||(45464623-45464666)
chr2 (3-88)||(24951917-24952003)
chr2 (4-42)||(28110314-28110351)
chr2 (1-31)||(38210988-38211018)
chr2 (13-84)||(40385440-40385513)
chr2 (15-99)||(41089157-41089243)
chr2 (1-77)||(12693598-12693677)
chr2 (16-89)||(21593173-21593246)
chr2 (22-99)||(33941180-33941257)
chr2 (63-104)||(43301877-43301918)
chr2 (9-89)||(17688118-17688198)
chr2 (20-83)||(30180856-30180920)
chr2 (17-88)||(33441518-33441590)
chr2 (56-104)||(33641129-33641177)
chr2 (4-99)||(38625095-38625190)
[»] chr3 (47 HSPs)
chr3 (1-104)||(3548310-3548416)
chr3 (1-98)||(5417222-5417320)
chr3 (1-99)||(49872904-49873004)
chr3 (1-101)||(22949246-22949349)
chr3 (1-99)||(27760291-27760391)
chr3 (1-99)||(30586164-30586266)
chr3 (5-99)||(36867815-36867912)
chr3 (1-97)||(12767122-12767219)
chr3 (1-99)||(19623965-19624065)
chr3 (1-82)||(22949437-22949520)
chr3 (1-99)||(7584253-7584349)
chr3 (1-99)||(29313790-29313888)
chr3 (1-66)||(46902058-46902124)
chr3 (3-88)||(21549763-21549848)
chr3 (1-99)||(25110017-25110116)
chr3 (1-99)||(27432774-27432877)
chr3 (1-104)||(30586352-30586459)
chr3 (4-50)||(36867689-36867735)
chr3 (1-99)||(30271546-30271646)
chr3 (1-99)||(30271733-30271832)
chr3 (1-99)||(49872715-49872818)
chr3 (10-101)||(12766939-12767030)
chr3 (1-77)||(27760476-27760554)
chr3 (1-50)||(3548174-3548224)
chr3 (1-104)||(8355521-8355627)
chr3 (4-50)||(19623878-19623924)
chr3 (1-50)||(29313969-29314019)
chr3 (1-99)||(5416064-5416163)
chr3 (1-49)||(10979901-10979948)
chr3 (1-104)||(25109830-25109933)
chr3 (3-88)||(29853584-29853671)
chr3 (18-99)||(49880709-49880792)
chr3 (1-104)||(7118084-7118190)
chr3 (1-99)||(51252238-51252340)
chr3 (1-99)||(53806752-53806851)
chr3 (1-77)||(44172941-44173018)
chr3 (1-77)||(44179641-44179718)
chr3 (1-50)||(46901925-46901974)
chr3 (63-99)||(20737512-20737548)
chr3 (56-104)||(47115574-47115622)
chr3 (22-84)||(15289965-15290027)
chr3 (3-88)||(16295811-16295897)
chr3 (1-82)||(7118275-7118355)
chr3 (2-42)||(9351841-9351882)
chr3 (1-42)||(43767721-43767762)
chr3 (1-50)||(43767847-43767896)
chr3 (1-99)||(49880505-49880606)
[»] scaffold0740 (1 HSPs)
scaffold0740 (1-116)||(3632-3748)
[»] chr6 (34 HSPs)
chr6 (1-107)||(13357542-13357650)
chr6 (1-88)||(30245849-30245937)
chr6 (1-80)||(3593362-3593442)
chr6 (1-104)||(3593528-3593632)
chr6 (1-99)||(5334645-5334745)
chr6 (1-111)||(24062351-24062462)
chr6 (1-99)||(31885986-31886083)
chr6 (1-99)||(7054082-7054182)
chr6 (1-49)||(9286256-9286304)
chr6 (1-99)||(4840688-4840786)
chr6 (3-89)||(14985266-14985353)
chr6 (1-48)||(30246019-30246066)
chr6 (4-99)||(24062169-24062266)
chr6 (1-50)||(9286387-9286436)
chr6 (4-88)||(19376149-19376234)
chr6 (4-89)||(2181329-2181415)
chr6 (4-42)||(7576137-7576175)
chr6 (56-106)||(13114393-13114443)
chr6 (1-50)||(1319169-1319217)
chr6 (1-50)||(12321136-12321185)
chr6 (1-58)||(33561770-33561827)
chr6 (3-88)||(1309799-1309886)
chr6 (1-50)||(5953343-5953393)
chr6 (9-89)||(10366570-10366652)
chr6 (1-42)||(12321009-12321051)
chr6 (1-99)||(29942401-29942498)
chr6 (13-76)||(33751734-33751799)
chr6 (4-88)||(7017083-7017168)
chr6 (1-58)||(10827177-10827233)
chr6 (3-84)||(21226914-21226998)
chr6 (62-99)||(22573804-22573841)
chr6 (60-104)||(31116476-31116520)
chr6 (1-99)||(31851948-31852048)
chr6 (1-37)||(33561913-33561949)
[»] scaffold0113 (2 HSPs)
scaffold0113 (1-101)||(28070-28173)
scaffold0113 (4-101)||(28841-28940)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-100)||(91236-91334)
[»] scaffold0450 (2 HSPs)
scaffold0450 (1-99)||(7861-7963)
scaffold0450 (1-99)||(8050-8150)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-99)||(1829-1930)
scaffold0031 (1-99)||(2013-2115)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-98)||(38053-38151)
[»] scaffold0010 (2 HSPs)
scaffold0010 (2-99)||(26310-26408)
scaffold0010 (1-99)||(26490-26588)
[»] scaffold0809 (2 HSPs)
scaffold0809 (1-99)||(3771-3868)
scaffold0809 (1-48)||(3953-3999)
[»] scaffold0632 (1 HSPs)
scaffold0632 (1-98)||(2771-2872)
[»] scaffold0026 (2 HSPs)
scaffold0026 (22-88)||(4475-4541)
scaffold0026 (1-50)||(4617-4667)
[»] scaffold0727 (1 HSPs)
scaffold0727 (1-44)||(891-934)
[»] scaffold0002 (1 HSPs)
scaffold0002 (44-101)||(332065-332123)
[»] scaffold0136 (1 HSPs)
scaffold0136 (56-101)||(36755-36800)
[»] scaffold0111 (1 HSPs)
scaffold0111 (9-89)||(29647-29728)
[»] scaffold0004 (1 HSPs)
scaffold0004 (30-99)||(212515-212587)


Alignment Details
Target: scaffold0384 (Bit Score: 309; Significance: 1e-174; HSPs: 3)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 377
Target Start/End: Original strand, 4385 - 4760
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaact 100  Q
    |||||||||||| |||||||||| || |||||||||||||| |||||||| |||||||||||||||| ||||||||| |||||||||| ||||||||||     
T  4385 atcaaaacaaaattattttacagcgg-tgaatcaaaataaattttttacagggggaaaccgaaaatgacctatattacagggggtaaagacctattaacc 4483  T
Q  101 caaatttaaatcataatagacatatgaaatgcaaattaactcaaccgcaaagaacatattaatacaagactgagtaaaacttactttctgcttcttgtat 200  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4484 caaatttaaatcataacagacatatgaaatgcaaattaattcaaccgcaaagaacatattaatacaagactgagtaaaacttactttctgcttcttgtat 4583  T
Q  201 ctcgggaagaatcgggttgattgtcacacgaggtttttcctttatgtcatctccttttggcatcttagcattttctgtttattgttttgatcaaccaaag 300  Q
    |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4584 ctcgagaagaatcgggttgattgtcacacgaggcttttcctctatgtcatctccttttggcttcttagcattttctgtttattgttttgatcaaccaaag 4683  T
Q  301 ggtgaggatattttaatatgctgtaaggtaatacaccattacagcattgggaaaacttactttcactttcctaatct 377  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4684 ggtgaggatattttaatatgctgtaagttaatacaccattacagcattgggaaaacttactttcactttcctaatct 4760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 443 - 547
Target Start/End: Original strand, 4826 - 4930
Alignment:
Q  443 gaaagaggtgatttgagttacccatttgtgacgcttgtgagatattcaaagatggacattcctgataagtacaatcatcatatatacgctttgaactctc 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  4826 gaaagaggtgatttgagttacccatttgtgacgcttgtgagatattcaaagacggacattcctgataagtacaatcatcatatgtacgctttgaactctc 4925  T
Q  543 tgctc 547  Q
    |||||    
T  4926 tgctc 4930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 5643 - 5709
Alignment:
Q  102 aaatttaaatcataatagacatatgaaatgcaaattaactcaaccgcaaag-aacatattaatacaa 167  Q
    |||| ||||||||||||||   |||||||||||||||| |||||||||||| || ||||||||||||    
T  5643 aaatctaaatcataatagatggatgaaatgcaaattaattcaaccgcaaagaaatatattaatacaa 5709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 252; Significance: 1e-140; HSPs: 4)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 62 - 372
Target Start/End: Original strand, 6963 - 7274
Alignment:
Q  62 aaaatggcctatattatagggggtaaaaacctattaactcaaatttaaatcataatagacatatgaaatgcaaattaactcaaccgcaaagaacatatta 161  Q
    |||||||||||||||| |  | ||||| |||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  6963 aaaatggcctatattacaaagcgtaaagacctattaacccaaatttaaatcataacagacatatgaaatgcaaattaattcaaccgcaaagaacatatta 7062  T
Q  162 atacaagactgagtaaaacttactttctgcttcttgtatctcgggaagaatcgggttgattgtcacacgaggtttttcctttatgtcatctccttttggc 261  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  7063 atacaagactgagtaaaacttactctctgcttcttgtatctcgggaagaatcgggttgattgtcacacgaggcttttcctctatgtcatctccttttggc 7162  T
Q  262 atcttagcattttctgtttattgttttgatcaaccaaagggtgaggatattttaatatgctgtaaggtaatacaccattacagcatt-gggaaaacttac 360  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  7163 ttcttagcattttctgtttattgttttgatcaaccaaagggtgaggatattttaatatgctgtaagttaatacaccattacagcattggggaaaacttac 7262  T
Q  361 tttcactttcct 372  Q
    ||||||||||||    
T  7263 tttcactttcct 7274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 501 - 547
Target Start/End: Original strand, 7270 - 7316
Alignment:
Q  501 ttcctgataagtacaatcatcatatatacgctttgaactctctgctc 547  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  7270 ttcctgataagtacaatcatcatatatacgctttgaactctctgctc 7316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 6897 - 6812
Alignment:
Q  16 ttttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattataggggg-taaaaacctattaac 99  Q
    |||||||||||||||||| |||||||| ||||||| |||| |||||  ||||| ||||||||| |||||| |||| ||||||||||    
T  6897 ttttacagggggtgaatctaaataaaaattttacagggggaaaaccataaatgacctatattacagggggataaagacctattaac 6812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 7857 - 7921
Alignment:
Q  102 aaatttaaatcataatagacatatgaaatgcaaattaactcaaccgcaaagaacatattaatacaa 167  Q
    |||| ||||||||||||||   |||||||||||||||| |||||||||||||| |||||| |||||    
T  7857 aaatctaaatcataatagatggatgaaatgcaaattaattcaaccgcaaagaa-atattattacaa 7921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 1e-30; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27794460 - 27794360
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatag-ggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||| |||||||||    
T  27794460 atcaaaacaaaaatattttacaggggggtgaatcaaaataaaatttttacagggggaaaccggaaatgacctatattataggggggtaaagacctattaa 27794361  T
Q  99 c 99  Q
    |    
T  27794360 c 27794360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 5330522 - 5330417
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||  | |||| ||||||| ||||||||| |  |||||||||||||||||    
T  5330522 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaggggtgaaaactgaaaatgacctatattacatagggtaaaaacctattaa 5330423  T
Q  99 ctcaaa 104  Q
    | ||||    
T  5330422 cccaaa 5330417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 7112677 - 7112776
Alignment:
Q  1 atcaaaacaaaaatattttacagggggt-gaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| |||||  ||||| | ||||||| |||||||||| ||||||||||    
T  7112677 atcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttacatgggaaaaccagaaatgacatatattacagggggtaaagacctattaac 7112776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7112596 - 7112496
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||| ||||||| ||||| ||||||||||||| ||||||| ||||  |||||||||||| | ||||||| |||||||||| |||||||||    
T  7112596 atcaaaacaaaaatgttttacaaggggtaaatcaaaataaaaattttacagggggaaaaaccgaaaatgacatatattacagggggtaaagacctattaa 7112497  T
Q  99 c 99  Q
    |    
T  7112496 c 7112496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31532445 - 31532545
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  |||  |||||  ||||| ||||||||||||| | |||| |||||||||    
T  31532445 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacagagggaaaaaccagaaatgacctatattataggagataaagacctattaa 31532544  T
Q  99 c 99  Q
    |    
T  31532545 c 31532545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4646860 - 4646759
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttac--acggggaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||  | ||| ||||| |||||| | ||||||| |||||||||| ||||||||    
T  4646860 atcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttacagaggggaaaaccaaaaatgacttatattagagggggtaaagacctatta 4646761  T
Q  98 ac 99  Q
    ||    
T  4646760 ac 4646759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28724484 - 28724585
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||||| || |  |||||||||||| | ||||||| |||||||||| ||||||||    
T  28724484 atcaaaacaaaaatattttacagggggataaatcaaaataaaaattttacagggtggaaaaccgaaaatgacatatattagagggggtaaagacctatta 28724583  T
Q  98 ac 99  Q
    ||    
T  28724584 ac 28724585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 46561487 - 46561388
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatatta-tagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||  || |||||  ||||| |||||||||  |||||||||| || |||||||    
T  46561487 atcaaaacaaaaatattttacagggtgtgaatcaaaataaaaattttacagaggaaaaccagaaatgacctatattacaagggggtaaagacatattaac 46561388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 46136188 - 46136083
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||| |||||||||||||||||  |||||  ||||  ||||  |||||| ||||||||| |||||||||| || ||||||    
T  46136188 atcaaaacaaaaatattttacaggaggtgaatcaaaataaaaaatttacgagggggaaaacaaaaaatgacctatattacagggggtaaagacttattaa 46136089  T
Q  99 ctcaaa 104  Q
    | ||||    
T  46136088 cccaaa 46136083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 29018551 - 29018647
Alignment:
Q  1 atcaaaacaaaaatattttacaggg-ggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctat 95  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||| ||||||| |||  |||||||||||| | ||||||| |||||||||| ||||||    
T  29018551 atcaaaacaaaaatattttacagggaggtaaattaaaataaaaattttacatgggaaaaaccgaaaatgacttatattacagggggtaaagacctat 29018647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6540873 - 6540931
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaacc 60  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||    
T  6540873 atcaaaacaaaaatattttatagggggtgaatcaaaataaaaattttaca-ggggaaacc 6540931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9043629 - 9043676
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaattttta 48  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  9043629 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttta 9043676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 16698969 - 16698871
Alignment:
Q  4 aaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacggg--gaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| |||   |||||| |||||  |||||||| || ||||||| ||||||||||    
T  16698969 aaaacaaaaatattttacaggggggtgaatcaaaataaaaattttacaggggaaaaaaccggaaatgatctatattacagagggtaaagacctattaac 16698871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16699059 - 16699160
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatatta-tagggggtaaaaacctatt 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||  |||||  ||||| |||||||||  |||||||||| |||||||    
T  16699059 atcaaaacaaaaatattttacagtggggtgaatcaaaataaaaattttac-cggggaaaaaccagaaatgacctatattaccagggggtaaagacctatt 16699157  T
Q  97 aac 99  Q
    |||    
T  16699158 aac 16699160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42736777 - 42736876
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||| |||||||||||||||| | ||| ||||||||||| | ||||||| |||| |||||| ||||| ||||||||| ||||| |||| ||||||||||    
T  42736777 atcaagacaaaaatattttacaagaggtaaatcaaaataagaattttacagggggaaaaccggaaatgacctatattacaggggataaagacctattaac 42736876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28411017 - 28410916
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    |||| ||||||||||||||||| |||||| ||||||||||||| |||||||  |||  ||| |||||||| ||||||||| ||||| |||| ||||||||    
T  28411017 atcacaacaaaaatattttacaagggggtaaatcaaaataaaaattttacagagggaaaaatcgaaaatgacctatattacaggggataaagacctatta 28410918  T
Q  98 ac 99  Q
    ||    
T  28410917 ac 28410916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 35034250 - 35034360
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacgg-ggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||| | |||||  |||||||||||||||||| || || | |||||| ||||| ||||||||| ||||| |||| |||||||||    
T  35034250 atcaaaacaaaaatattttataggggggcaaatcaaaataaaattttttcagggagaaaaccggaaatgacctatattacaggggataaagacctattaa 35034349  T
Q  99 ctcaaatttaa 109  Q
    | ||| |||||    
T  35034350 cccaattttaa 35034360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28411102 - 28411187
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattataggggg 84  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||  |||||  ||||| ||||||||| ||||||    
T  28411102 atcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttacaggggaaaaaccagaaatgacctatattaaaggggg 28411187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 27794550 - 27794606
Alignment:
Q  3 caaaacaaaaatattttacagggg-gtgaatcaaaataaaatttttacacggggaaa 58  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  27794550 caaaacaaaaatattttacaggggggtgaatcaaaataaaaattttacagggggaaa 27794606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5330609 - 5330656
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaattttta 48  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  5330609 atcaaaacaaaaatattttacaggtggtgaatcaaaataaaaatttta 5330656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13154682 - 13154581
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttacacg--gggaaaccgaaaatggcctatattataggggg-taaaaacctatt 96  Q
    ||||||||||||||||||||||| |||||||||||||||||||  |||||| |  || ||| || ||||| |||||||||||||||| |||| |||||||    
T  13154682 atcaaaacaaaaatattttacagaggggtgaatcaaaataaaa-atttacaggacggaaaatcggaaatgacctatattatagggggataaagacctatt 13154584  T
Q  97 aac 99  Q
    |||    
T  13154583 aac 13154581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 21853516 - 21853418
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaa--tttttacacg-gggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||||||||| |||||||| ||||   ||||||| | || |||||  ||||| ||||||||| |||||||||| ||||||||||    
T  21853516 aaaacaaaaatattttacagggggtaaatcaaaacaaaaatattttacaggaggaaaaccagaaatgacctatattacagggggtaaagacctattaac 21853418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5348324 - 5348406
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattataggg 82  Q
    |||||||||||||||||||||||| |||||||||||||||||  |||| | |||| ||| |  ||||| ||||||||||||||    
T  5348324 atcaaaacaaaaatattttacaggtggtgaatcaaaataaaaaatttataaggggaaaatcagaaatgacctatattataggg 5348406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 9043532 - 9043450
Alignment:
Q  18 ttacagggggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||| |||||||||||||||| ||||||| |||  |||||||||||| | ||||||||||  |||||| ||||||||||    
T  9043532 ttacagggtgtgaatcaaaataaaaattttacaggggaaaaaccgaaaatgacatatattatagcaggtaaagacctattaac 9043450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 47022023 - 47022124
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttac--acggggaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    ||||||||||||||||||||||  |||||||||||||||||||| |||||  |  || ||| |  ||||| ||||||||| |||||||||| ||||||||    
T  47022023 atcaaaacaaaaatattttacaaaggggtgaatcaaaataaaatgtttacagagcggaaaatcataaatgacctatattacagggggtaaagacctatta 47022122  T
Q  98 ac 99  Q
    ||    
T  47022123 ac 47022124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21853954 - 21854054
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggg--gaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||    |||||||||||||||| ||||||| |||   |||||| ||| | ||||||||| | |||||||| |||||||||    
T  21853954 atcaaaacaaaaatattttacaaatagtgaatcaaaataaaaattttacaggggaaaaaaccggaaacgacctatattacaaggggtaaagacctattaa 21854053  T
Q  99 c 99  Q
    |    
T  21854054 c 21854054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44200429 - 44200329
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||| |  ||||||||||| |||||||| |||  ||||||| || |  ||||| |||||||||||||||| | |||||||| |||||||||    
T  44200429 atcaaaacaaaaaaaaattacagggggtaaatcaaaacaaatattttacagggtggaaaaccaaaaatggcctatattacaaggggtaaagacctattaa 44200330  T
Q  99 c 99  Q
    |    
T  44200329 c 44200329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 51904081 - 51904032
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  51904081 atcaaaacaaaaatatattacacggggtgaatcaaaataaaaattttaca 51904032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 6607273 - 6607186
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||| |||||||||||||||||||| |||||||| |||  ||||||| ||||  ||||| |||||||| ||||||| ||| ||||||    
T  6607273 caaaaaaaaaatattttacagggggtaaatcaaaaaaaatattttacaggggggaaaaccaaaaatggcatatattacaggaggtaaa 6607186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 24004708 - 24004794
Alignment:
Q  2 tcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    |||||| ||| |||||||||||||||| |||||||| |||  ||||||| ||| ||||  |||||| ||||||||| | ||||||||    
T  24004708 tcaaaaaaaatatattttacagggggtaaatcaaaaaaaatattttacaggggaaaacaaaaaatgacctatattacaaggggtaaa 24004794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35167963 - 35168052
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaa 88  Q
    |||||||||||||||||||||||||||| ||| |||| |||  |||||||  | |  ||||| |||||| ||||||||| ||||||||||    
T  35167963 atcaaaacaaaaatattttacagggggtaaataaaaaaaaatattttacagagtgtaaaaccaaaaatgacctatattacagggggtaaa 35168052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 50596116 - 50596213
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||||| |||| |||||||||||| || ||||||| |   |||||  ||||  ||||||||| | |||||||| ||||||||||    
T  50596116 atcaaaacaaaaatattttacgggggatgaatcaaaatataaattttaca-gaaaaaaccagaaataacctatattacaaggggtaaagacctattaac 50596213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 51809849 - 51809768
Alignment:
Q  10 aaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaa 89  Q
    ||||||||||||||||||| |||||||| |||  ||||||| ||||  ||||| |||||  ||||||||| |||||||||||    
T  51809849 aaaatattttacagggggtaaatcaaaaaaaatattttacagggggaaaaaccaaaaataacctatattacagggggtaaaa 51809768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47021939 - 47021898
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  47021939 atcaaatcaaaaatattttacatggggtgaatcaaaataaaa 47021898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 12277410 - 12277493
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattataggggg 84  Q
    ||||| |||||||||||||||||||| |||||||| |||  ||||||| ||  | ||||| |||||| ||||||||| ||||||    
T  12277410 caaaaaaaaaatattttacagggggtaaatcaaaaaaaatattttacaggggagaaaaccaaaaatgacctatattacaggggg 12277493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15336808 - 15336907
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaa--accgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||| || ||| |||||||||||||  ||||||  ||| |  ||||| |||| ||||||||| || || |||| |||||||||    
T  15336808 atcaaaacaaaaatattttaccggaggtcaatcaaaataaaaaatttacagaggggatgaccgagaatgacctatattacagaggataaagacctattaa 15336907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 17746480 - 17746523
Alignment:
Q  46 ttacacggggaaaccgaaaatggcctatattatagggggtaaaa 89  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||    
T  17746480 ttacaggggaaaaccgaaaatgacctatattatagggggtaaaa 17746523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36343258 - 36343156
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagg-gggtaaaaacctatt 96  Q
    ||||||||||||||||||||||| ||||| ||| |||| ||||  |||||| ||||  ||||  |||||| ||||||||| ||| ||||||| |||||||    
T  36343258 atcaaaacaaaaatattttacaggggggtaaataaaaaaaaaaaatttacaggggggaaaacaaaaaatgacctatattacaggagggtaaagacctatt 36343159  T
Q  97 aac 99  Q
    |||    
T  36343158 aac 36343156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 36343341 - 36343424
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattataggggg 84  Q
    |||||||||||||||||||||||||||| ||| || | |||||||  |   |||||||||  ||||| ||||||||| ||||||    
T  36343341 atcaaaacaaaaatattttacagggggtaaataaataaaaaatttacagggggggaaaccagaaatgacctatattacaggggg 36343424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 15790438 - 15790512
Alignment:
Q  12 aatattttacagg-gggtgaatcaaaataaaatttttacacgg-ggaaaccgaaaatggcctatattataggggg 84  Q
    ||||||||||||| |||||||||||||||||| ||||||| || | |||||  ||||| ||||||||| ||||||    
T  15790438 aatattttacaggagggtgaatcaaaataaaaattttacagggtgaaaaccagaaatgacctatattacaggggg 15790512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4646948 - 4646989
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    ||||||||||||| ||||||||||||||  ||||||||||||    
T  4646948 atcaaaacaaaaacattttacagggggtatatcaaaataaaa 4646989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 10027948 - 10028032
Alignment:
Q  18 ttacagggggtgaatcaaaataaaat-ttttac--acggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||| |||||||| ||||| ||||||  | ||| |||||  ||||| ||||||||| |||||||||| ||||||||||    
T  10027948 ttacagggggtaaatcaaaaaaaaatattttacagaggggaaaaccagaaatgacctatattacagggggtaaagacctattaac 10028032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31532359 - 31532319
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  31532359 atcaaaataaaaatattttac-gggggtgaatcaaaataaaa 31532319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2059296 - 2059260
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaa 37  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  2059296 atcaaaacaaaaatattttacagggggtaaataaaaa 2059260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 21853605 - 21853557
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaaacctattaactcaaa 104  Q
    |||||| ||||| |||||||||||||||||||||  |||||||| ||||    
T  21853605 aaaccggaaatgacctatattatagggggtaaaacactattaacccaaa 21853557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 22604634 - 22604717
Alignment:
Q  18 ttacagggggtgaatcaaaataaaatttttacacggg--gaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||| |||||||| |||  ||||||| |||   |||||| ||||| ||||||||| ||||| |||| ||||||||||    
T  22604634 ttacagggggtaaatcaaaaaaaatattttacaggggaaaaaaccggaaatgacctatattacaggggttaaagacctattaac 22604717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 40498123 - 40498071
Alignment:
Q  1 atcaaaacaaaaa-tattttacagggggtgaatcaaaataaaatttttacacg 52  Q
    ||||||||||||| ||||||||||| | | ||||||||||||| |||||||||    
T  40498123 atcaaaacaaaaaatattttacaggagataaatcaaaataaaaattttacacg 40498071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 42736691 - 42736663
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtg 29  Q
    |||||||||||||||||||||||||||||    
T  42736691 atcaaaacaaaaatattttacagggggtg 42736663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 4e-30; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17313015 - 17313110
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctatt 96  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| || |||||| |||||||||| |||||||    
T  17313015 atcaaaacaaaaatattttacagggggtgaatcaaaataaattttttacagggggaaaccggaaatgacccatattacagggggtaaagacctatt 17313110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 22273032 - 22272932
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||   ||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  22273032 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaaatttacaggagggaaaaccgaaaatgacctatattacagggggtaaaaacctattaa 22272933  T
Q  99 c 99  Q
    |    
T  22272932 c 22272932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21798521 - 21798625
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca-cggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||| ||||||| ||||||||| ||||| |||| ||||||||||    
T  21798521 atcaaaacaaaaatattttacagggggtgaatcaaaataaattttttacaggggggaaactgaaaatgacctatattacaggggataaagacctattaac 21798620  T
Q  100 tcaaa 104  Q
     ||||    
T  21798621 ccaaa 21798625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 17289931 - 17290031
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| | ||||  ||||  |||||| |||||||||||||||||||| |||||||||    
T  17289931 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttaaaggggggaaaacaaaaaatgacctatattatagggggtaaagacctattaa 17290030  T
Q  99 c 99  Q
    |    
T  17290031 c 17290031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 129 - 294
Target Start/End: Complemental strand, 41074926 - 41074761
Alignment:
Q  129 atgcaaattaactcaaccgcaaagaacatattaatacaagactgagtaaaacttactttctgcttcttgtatctcgggaagaatcgggttgattgtcaca 228  Q
    ||||||||||| |||||| ||||||| |||||||||||    ||||||||||||||||||| ||||||| |||||   ||||| ||||||| ||||||||    
T  41074926 atgcaaattaattcaaccacaaagaatatattaatacagtgttgagtaaaacttactttctacttcttgcatctcatcaagaaacgggttggttgtcaca 41074827  T
Q  229 cgaggtttttcctttatgtcatctccttttggcatcttagcattttctgtttattgttttgatcaa 294  Q
     |||  ||||||| ||||  |||| ||||| || ||||||||  |||||||| |||||||||||||    
T  41074826 tgagaattttcctctatgctatctactttttgcttcttagcaacttctgtttgttgttttgatcaa 41074761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 21780220 - 21780124
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||| |||| |||||||||||| ||||||||| |||||||||| ||||||||||    
T  21780220 aaaaccaaaatattttacatggggtgaatcaaaataaaaattttacagggggaaaaccgaaaatgacctatattacagggggtaaagacctattaac 21780124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 39868570 - 39868472
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  |    |||||||||||  ||||||||| |||||||||||||||||||    
T  39868570 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacagtgaaaaaaaccgaaaataacctatattacagggggtaaaaacctatta 39868472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17289845 - 17289744
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattataggggg-taaaaacctatta 97  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  ||||| |||||| ||||||||  |||||| |||| ||||||||    
T  17289845 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaggggggaaaaccaaaaatgacctatatttcagggggataaagacctatta 17289746  T
Q  98 ac 99  Q
    ||    
T  17289745 ac 17289744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16493620 - 16493520
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||  | |||||| ||||| ||||||||| ||| |||||| |||||||||    
T  16493620 atcaaaacaaaaatattttacagggagtgaatcaaaataaattttttacaggggtgaaaaccggaaatgacctatattacaggaggtaaagacctattaa 16493521  T
Q  99 c 99  Q
    |    
T  16493520 c 16493520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 39868652 - 39868751
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||  |||||| |||| |||| | | |||||| ||||||||||    
T  39868652 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttactgggggaaaacaaaaaatgacctacattacatgaggtaaagacctattaac 39868751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 40696163 - 40696260
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg-ggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||| || | |||||||||||| | ||||||| |  ||||||| ||||||||||    
T  40696163 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaaatttacagggagaaaaccgaaaatgacatatattaca--gggtaaagacctattaac 40696260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21780310 - 21780411
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattataggg-ggtaaaaacctatta 97  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||  |||||  ||||| ||||||||| |||| |||||| ||||||||    
T  21780310 atcaaaaccaaaatattttacagggggtgaatcaaaataaaaattttatagggggaaaaaccagaaatgacctatattacagggaggtaaagacctatta 21780409  T
Q  98 ac 99  Q
    ||    
T  21780410 ac 21780411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21798435 - 21798334
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattata-gggggtaaaaacctatta 97  Q
    |||||||||||||||||||||||||| ||||||||||||||| || |||| ||||  |||||  ||||| ||||||||| | ||||||||| ||||||||    
T  21798435 atcaaaacaaaaatattttacaggggatgaatcaaaataaaaattctacagggggtaaaaccagaaatgacctatattacaggggggtaaagacctatta 21798336  T
Q  98 ac 99  Q
    ||    
T  21798335 ac 21798334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 56467602 - 56467703
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcct-atattatagggggtaaaaacctatta 97  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||  | |||||  ||||| ||| ||||||  ||||||||| ||||||||    
T  56467602 atcaaaacaaaaatattttacagggggtgaatcaaaataaattttttacagggatgaaaaccagaaatgacctaatattactgggggtaaagacctatta 56467701  T
Q  98 ac 99  Q
    ||    
T  56467702 ac 56467703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9001546 - 9001497
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9001546 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttaca 9001497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16493676 - 16493725
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16493676 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttaca 16493725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18454296 - 18454194
Alignment:
Q  1 atcaaaacaaaaatattttac-agggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattata-gggggtaaaaacctatt 96  Q
    ||||||||||||||||||||| |||||||| |||||||||||| ||||||| ||  | |||||| ||||| ||||||||| | ||||||||| |||||||    
T  18454296 atcaaaacaaaaatattttacaagggggtgtatcaaaataaaaattttacaggggtgaaaaccggaaatgacctatattacaggggggtaaagacctatt 18454197  T
Q  97 aac 99  Q
    |||    
T  18454196 aac 18454194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6439287 - 6439198
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaa 88  Q
    |||||||||||||||||||||||||||| ||| |||| ||||  |||||| || |  |||||||||||| ||||||||| ||||||||||    
T  6439287 atcaaaacaaaaatattttacagggggtaaataaaaaaaaaaaatttacagggtgtaaaaccgaaaatgacctatattacagggggtaaa 6439198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44519560 - 44519459
Alignment:
Q  1 atcaaaacaaaaatattttacagggggt-gaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    |||||||||||||||||||| | ||||| |||||||||||||| ||||||| ||||  |||||| ||||| ||| ||||| ||| |||||| ||||||||    
T  44519560 atcaaaacaaaaatattttataaggggttgaatcaaaataaaaattttacaaggggaaaaaccggaaatgacctctattacaggaggtaaagacctatta 44519461  T
Q  98 ac 99  Q
    ||    
T  44519460 ac 44519459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 44561550 - 44561496
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaa 58  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  44561550 aaaacaaaaatattttacagggggtgaatcaaaataaaaattttactgggggaaa 44561496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45900740 - 45900794
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg 55  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  45900740 atcaaaacaaaaatattttacaaagggtgaatcaaaataaaatttttacaggggg 45900794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9791599 - 9791688
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacgg-ggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||| || | ||||| |||||| | |||||||  |||||||||    
T  9791599 atcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttacagggagaaaaccaaaaatgacttatattacggggggtaaa 9791688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 18454385 - 18454485
Alignment:
Q  3 caaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattata-gggggtaaaaacctattaa 98  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||   | | |||||| ||||| ||||||||| | ||||||||| |||||||||    
T  18454385 caaaacaaaaatattttacaggggggtgaatcaaaataaaaattttacaggagtgaaaaccggaaatgacctatattacaggggggtaaagacctattaa 18454484  T
Q  99 c 99  Q
    |    
T  18454485 c 18454485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 47321087 - 47320992
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctat 95  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||  ||||  | |||| ||||||||| ||||| |||| ||||||    
T  47321087 atcaaaacaaaaatattttaca-ggggtgaatcaaaataaaaattttacaagggggaaaacaaagaatgacctatattacaggggataaagacctat 47320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11563394 - 11563296
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||| || |||||||||||||||||||| ||||||| ||  | ||||  |||||  ||||||||||||| |||||| |||||||||    
T  11563394 atcaaaacaaaaatatttcac-gggggtgaatcaaaataaaaattttacaggggagaaaacaaaaaataacctatattataggaggtaaagacctattaa 11563296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18320651 - 18320751
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattata-gggggtaaaaacctattaa 98  Q
    ||||| |||||||||||||||| | ||| ||||||||||| | ||||||| |||| |||||| ||||| ||||||||| | ||||||||| |||||||||    
T  18320651 atcaagacaaaaatattttacaagaggtaaatcaaaataagaattttacagggggaaaaccggaaatgacctatattacaggggggtaaagacctattaa 18320750  T
Q  99 c 99  Q
    |    
T  18320751 c 18320751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 38656026 - 38656110
Alignment:
Q  17 tttacagggggtgaatcaaaataaaatttttacacggggaaa--ccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||| ||||||||||||||||||||| |||||||  || |||  |  |||||| |||||||||||||||||||| ||||||||||    
T  38656026 tttaaagggggtgaatcaaaataaaaattttacagtggaaaaaacaaaaaatgacctatattatagggggtaaagacctattaac 38656110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 56467516 - 56467468
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  56467516 atcaaaacaaaaatattttaca-ggggtgaatcaaaataaattttttaca 56467468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 51396261 - 51396161
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttaca-cggggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||  ||| |||||||||||||| |||||||  ||| |||||  ||||| | ||||||| ||||| |||| |||||||||    
T  51396261 atcaaaacaaaaatattttacagtagggcgaatcaaaataaaaattttacagagggaaaaccagaaatgacttatattacaggggataaagacctattaa 51396162  T
Q  99 c 99  Q
    |    
T  51396161 c 51396161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13334926 - 13334824
Alignment:
Q  1 atcaaaacaaaaatattttac-agggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattata-gggggtaaaaacctatt 96  Q
    ||||||||||||||||||||| ||||||| |||||||| |||  ||||||| ||||  |||||  ||||| ||||||||| | ||||||||| |||||||    
T  13334926 atcaaaacaaaaatattttacaagggggtaaatcaaaaaaaatattttacaggggggaaaaccagaaatgacctatattacaggggggtaaagacctatt 13334827  T
Q  97 aac 99  Q
    |||    
T  13334826 aac 13334824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 1386196 - 1386242
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||    
T  1386196 aaaacaaaaatattttacaggggataaatcaaaataaaaattttaca 1386242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10682784 - 10682739
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttt 46  Q
    |||||||||||||||||||||||||||| |||||||| || |||||    
T  10682784 atcaaaacaaaaatattttacagggggtaaatcaaaaaaatatttt 10682739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10896424 - 10896379
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttt 46  Q
    |||||||||||||||||||||||||||| |||||||| || |||||    
T  10896424 atcaaaacaaaaatattttacagggggtaaatcaaaaaaatatttt 10896379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43751234 - 43751283
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||||||| | ||||| ||||||||| |||||||    
T  43751234 atcaaaacaaaaatattttacaggagatgaattaaaataaaaattttaca 43751283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 45900653 - 45900612
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  45900653 atcaaaacaaaaatattttacagggggtaaatcaaaacaaaa 45900612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 4431392 - 4431305
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||| ||||||||||||||| |||| |||||||| |||  ||||||| ||||  ||||| |||||  ||||||||| ||||||||||    
T  4431392 caaaaaaaaaatattttacagagggtaaatcaaaaaaaatattttacaagggggaaaaccaaaaataacctatattacagggggtaaa 4431305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 5401974 - 5402053
Alignment:
Q  22 agggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatatta-tagggggtaaaaacctattaac 99  Q
    ||||||| ||||||||||||  ||||||| |||| |||||| ||||| |||||||||  |||||||||| ||||||||||    
T  5401974 agggggtaaatcaaaataaatattttacagggggaaaaccggaaatgacctatattacaagggggtaaagacctattaac 5402053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 16482157 - 16482098
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacggggaaac 59  Q
    |||||||||||||||| |||||| ||| ||||||||||||||| ||||||| ||| ||||    
T  16482157 atcaaaacaaaaatatcttacagagggatgaatcaaaataaaaattttacatgggaaaac 16482098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16482242 - 16482285
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatt 44  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||    
T  16482242 atcaaaacaaaaatattttacagggggtaaataaaaaaaaaatt 16482285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 27450063 - 27450141
Alignment:
Q  13 atattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaa 89  Q
    |||||||||||| ||| ||||||||||||  ||||||| ||||  ||||| |||||| | ||||||| |||||||||||    
T  27450063 atattttacaggaggtaaatcaaaataaatattttacaggggggaaaaccaaaaatgacatatattacagggggtaaaa 27450141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 28292152 - 28292065
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaa 89  Q
    ||||| |||| | ||||||||||||| |||||||| |||  ||||||| |||| ||||  |||||| ||||||||| |||||||||||    
T  28292152 caaaaaaaaatttttttacagggggtaaatcaaaaaaaatattttacagggggaaaacaaaaaatgacctatattacagggggtaaaa 28292065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 30966699 - 30966625
Alignment:
Q  16 ttttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||||||||||| |||||||| |||  ||||||| ||||  ||||  |||||| ||||||||||||||||||||    
T  30966699 ttttacagggggtaaatcaaaaaaaatattttacaggggggaaaacaaaaaatgacctatattatagggggtaaa 30966625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 43318576 - 43318675
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg-gggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||| ||||||||| |||||||||| |||||||||||||  |||||| | || |||||  ||||| ||||||||| || | || || ||||||||||    
T  43318576 atcaaaaaaaaaatattctacagggggtaaatcaaaataaaaaatttacaggtggaaaaccagaaatgacctatattacagagagtgaagacctattaac 43318675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 50138533 - 50138490
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||    
T  50138533 aaaccgaaaatgacctatattacagggggtaaagacctattaac 50138490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 51965472 - 51965374
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca-cggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||||||  |||| ||||||||  | | |||||||  ||| |||||| ||||| ||||||||| |||| ||||| ||||||||||    
T  51965472 atcaaaacaaaaatattttaca-cgggtaaatcaaaaatacaattttacagagggaaaaccggaaatgacctatattacagggagtaaagacctattaac 51965374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 13032988 - 13032899
Alignment:
Q  2 tcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaa 89  Q
    |||||| ||| |||||||||||||||| ||| |||| |||  ||||||| || |  ||||| |||||| ||||||||| |||||||||||    
T  13032988 tcaaaaaaaatatattttacagggggtaaataaaaaaaaatattttacagggaggaaaaccaaaaatgacctatattacagggggtaaaa 13032899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 35370346 - 35370432
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca-cggggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||| || ||||||||||||| ||| |||||||| |||  |||||||  ||| ||||| |||||| ||||||||| ||||||||||    
T  35370346 caaaaaaataatattttacaggaggtaaatcaaaaaaaatattttacagagggaaaaccaaaaatgacctatattacagggggtaaa 35370432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44519648 - 44519698
Alignment:
Q  1 atcaaaacaaaaatattttacagggggt-gaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||| | ||||| |||||||||||||| |||||||    
T  44519648 atcaaaacaaaaatattttataaggggttgaatcaaaataaaaattttaca 44519698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 55363775 - 55363741
Alignment:
Q  16 ttttacagggggtgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||||||||||| |||||||    
T  55363775 ttttacagggggtgaatcaaaataaaaattttaca 55363741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10682872 - 10682913
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    |||||||||||||||||||||||||||| |||| ||| ||||    
T  10682872 atcaaaacaaaaatattttacagggggtaaatctaaaaaaaa 10682913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10896512 - 10896553
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    |||||||||||||||||||||||||||| |||| ||| ||||    
T  10896512 atcaaaacaaaaatattttacagggggtaaatctaaaaaaaa 10896553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 21246557 - 21246469
Alignment:
Q  23 gggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggg-gtaaaaacctattaactcaaattta 108  Q
    |||||| |||||||| || | ||||||| ||||  |||||||||||| ||||||||| ||||| ||||| |||||||||| | ||||||    
T  21246557 gggggtaaatcaaaaaaataattttacatgggggaaaaccgaaaatgacctatattacaggggtgtaaagacctattaaccctaattta 21246469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 47629209 - 47629242
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaa 89  Q
    |||||||||||| |||||||||||||||||||||    
T  47629209 aaaccgaaaatgacctatattatagggggtaaaa 47629242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 56216899 - 56216948
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||||    ||||||||||||||||| |||||||    
T  56216899 atcaaaacaaaaatattttacgaaaggtgaatcaaaataaaaattttaca 56216948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 550774 - 550675
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaat-caaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||| |||||||| ||   |||| ||||| |||| ||||||| ||||  ||||  |||||| ||||||||| |||||||||| ||||||||||    
T  550774 caaaacaaaaaaattttacaaggaccgaatccaaaaaaaaaattttacaaggggcaaaactaaaaatgacctatattacagggggtaaagacctattaac 550675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 1952835 - 1952748
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||| |||||  ||||||||||||| |||||||| |||  ||||||| ||||  ||||  |||||| ||||||||| ||||||||||    
T  1952835 caaaaaaaaaaatttttacagggggtaaatcaaaaaaaatattttacatgggggaaaactaaaaatgacctatattacagggggtaaa 1952748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 11563501 - 11563572
Alignment:
Q  30 aatcaaaataaaatttttacacggg--gaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||| ||||||| |||   |||||  ||||| ||||||||| |||||||||| ||||||||||    
T  11563501 aatcaaaataaaaattttacaggggaaaaaaccagaaatgacctatattacagggggtaaagacctattaac 11563572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 13910808 - 13910891
Alignment:
Q  4 aaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattataggggg 84  Q
    ||||||||||||||||||| |||||| |||||||| |||  ||||||| ||  | ||||| |||||| ||||||||| ||||||    
T  13910808 aaaacaaaaatattttacaggggggtaaatcaaaaaaaatattttacaggggagaaaaccaaaaatgacctatattacaggggg 13910891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 18320564 - 18320536
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtg 29  Q
    |||||||||||||||||||||||||||||    
T  18320564 atcaaaacaaaaatattttacagggggtg 18320536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 27579559 - 27579515
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaaacctattaact 100  Q
    |||||| ||||| ||||||||| |||||||||| |||||||||||    
T  27579559 aaaccggaaatgacctatattacagggggtaaagacctattaact 27579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 34318600 - 34318680
Alignment:
Q  9 aaaaatattttacagggggtgaatcaaaataaaatttttacacg-gggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    |||||||||||||||||| | |||||||| |||  ||||||| | || ||||| |||||| | ||||||| ||||||||||    
T  34318600 aaaaatattttacaggggataaatcaaaaaaaatattttacaggaggaaaaccaaaaatgacatatattacagggggtaaa 34318680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 49300782 - 49300734
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaaacctattaactcaaa 104  Q
    |||||| ||||| ||||||||| |||||||||||  |||||||||||||    
T  49300782 aaaccggaaatgacctatattacagggggtaaaacactattaactcaaa 49300734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 50719921 - 50719953
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaa 88  Q
    |||||||||||| ||||||||||||||||||||    
T  50719921 aaaccgaaaatgacctatattatagggggtaaa 50719953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 50727628 - 50727592
Alignment:
Q  63 aaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  50727628 aaatgacctatattacagggggtaaaaacctattaac 50727592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 50735642 - 50735606
Alignment:
Q  63 aaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  50735642 aaatgacctatattacagggggtaaaaacctattaac 50735606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 13279372 - 13279477
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||  |||||||||||| ||||||||| |||||||||| |||||||||    
T  13279372 atcaaaacaaaaatattttacagggggtgaattaaaataaaaattttacagggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaa 13279471  T
Q  99 ctcaaa 104  Q
    | ||||    
T  13279472 cccaaa 13279477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 21298113 - 21298016
Alignment:
Q  4 aaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||| | ||||||| |||||||||| ||||||||||    
T  21298113 aaaacaaaaatattttacaaaggggtgaatcaaaataaaatttttacacgggaaaaaccgaaaatgacttatattacagggggtaaagacctattaac 21298016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 43251612 - 43251514
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaact 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||| |||||||| | ||||||| |||  ||||| |||||||||||    
T  43251612 atcaaaacaaaaatattttacagggg-tgaatcaaaataaaatttttacaggggaaaatcgaaaatgacatatattagaggaagtaaagacctattaact 43251514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 38193149 - 38193254
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||| ||  | |||||  ||||| ||||||||| |||||||||| |||||||||    
T  38193149 atcaaaacaaaaatattttacaggggttgaatcaaaataaaaattttacaggggagaaaaccagaaatgacctatattacagggggtaaagacctattaa 38193248  T
Q  99 ctcaaa 104  Q
    | ||||    
T  38193249 cccaaa 38193254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 19410707 - 19410791
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattatagggg 83  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||   ||| |||||||||||| |||||||||||||||    
T  19410707 atcaaaacaaaaatattttacagggggtaaatcaaaataaaagttttacaggagggaaaaccgaaaatgacctatattatagggg 19410791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 39580123 - 39580226
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg-gggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||| | || |||||| ||||| ||||||||| |||||||||| ||||||||||    
T  39580123 atcaaaacaaaaatattttaca-ggggtgaatcaaaataaaaaatttacaggaggaaaaccggaaatgacctatattacagggggtaaagacctattaac 39580221  T
Q  100 tcaaa 104  Q
     ||||    
T  39580222 ccaaa 39580226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19979752 - 19979647
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||  |||||  ||||| | ||||||| |||||||||| |||||||||    
T  19979752 atcaaaacaaaaatattttacagggg-tgaatcaaaataaaaattttacacgaggaaaaaccagaaatgacttatattacagggggtaaagacctattaa 19979654  T
Q  99 ctcaaat 105  Q
    | |||||    
T  19979653 cccaaat 19979647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31186771 - 31186670
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||  |||  ||| |||||||| ||||||||| || ||||||| ||||||||    
T  31186771 atcaaaacaaaaatattttacaggggggtgaatcaaaataaaaattttacagagggaaaaatcgaaaatgacctatattacagagggtaaagacctatta 31186672  T
Q  98 ac 99  Q
    ||    
T  31186671 ac 31186670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1693407 - 1693506
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaa--ccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||  | ||||||| |||||||||||  ||||||| |||||||||    
T  1693407 atcaaaacaaaaatattttacaggggatgaatcaaaataaaaattttacagagggaaaaccagaaaatgacctatattata-agggtaaagacctattaa 1693505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23371635 - 23371735
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg-gggaaaccgaaaatggcctatattatagg-gggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||| | ||||||||||||| ||||||  | || ||| |||||||| ||||||||||||| ||||||| |||||||||    
T  23371635 atcaaaacaaaaatattttacaggggataaatcaaaataaaaattttacgggaggaaaatcgaaaatgacctatattataggagggtaaagacctattaa 23371734  T
Q  99 c 99  Q
    |    
T  23371735 c 23371735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 23784681 - 23784586
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| |||| |||||   |||| ||||||||| |||||||||| ||||||||||    
T  23784681 aaaacaaaaatattttacatggg-tgaatcaaaataaaatttttacagggggaaaaccagtaatgacctatattacagggggtaaagacctattaac 23784586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45164015 - 45163915
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttaca-cggggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||| || |||||||||||||||||||| |||||||  ||| ||| |||||||| ||||||||| | |||||||| |||||||||    
T  45164015 atcaaaacaaaaatattttgcaagggggtgaatcaaaataaaaattttacagtgggaaaatcgaaaatgacctatattacaaggggtaaagacctattaa 45163916  T
Q  99 c 99  Q
    |    
T  45163915 c 45163915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 23371538 - 23371451
Alignment:
Q  13 atattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||| ||| ||||||||||||||||||||||||| |||| |||||  ||||| ||||||||| |||||||||| ||||||||||    
T  23371538 atattttataggaggtgaatcaaaataaaatttttacagggggaaaaccataaatgacctatattacagggggtaaagacctattaac 23371451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24204916 - 24204830
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttacacg--gggaaaccgaaaatggcctatattataggggg 84  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||| |  || |||||||||||| ||||||||| ||||||    
T  24204916 atcaaaacaaaaatattttacagaggggtgaatcaaaataaaaattttacagggtggaaaaccgaaaatgacctatattacaggggg 24204830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13279287 - 13279186
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||   ||| |||||  ||||| ||||||||||| |||||||| || |||||    
T  13279287 atcaaaacaaaaatattttacaggggggtgaatcaaaataaaaattttacaagagggaaaaccagaaatgacctatattataaggggtaaagacgtatta 13279188  T
Q  98 ac 99  Q
    ||    
T  13279187 ac 13279186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 26050361 - 26050458
Alignment:
Q  2 tcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||||||| | |||| | ||||||||| ||||| |||| ||||||||||    
T  26050361 tcaaaacaaaagtattttacagggggttgaatcaaaataaaaattttaca-ggggaaaaccaaaaagacctatattacaggggttaaagacctattaac 26050458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 26059720 - 26059817
Alignment:
Q  2 tcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||||||| | |||| | ||||||||| ||||| |||| ||||||||||    
T  26059720 tcaaaacaaaagtattttacagggggttgaatcaaaataaaaattttaca-ggggaaaaccaaaaagacctatattacaggggttaaagacctattaac 26059817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 35913238 - 35913339
Alignment:
Q  1 atcaaaacaaaaatattttacagggg-gtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||| ||  | |||||  |||||  |||||||| |||||||||| ||||||||    
T  35913238 atcaaaacaaaaatattttataggggagtgaatcaaaataaaatttttacaggggtgtaaaccagaaatgatctatattacagggggtaaagacctatta 35913337  T
Q  98 ac 99  Q
    ||    
T  35913338 ac 35913339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1693320 - 1693243
Alignment:
Q  1 atcaaaacaaaaatattttacagggg-gtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatatta 77  Q
    |||||||||||||||||||||||||| ||||||||||||||||  |||||| ||| ||||||||||||  ||||||||    
T  1693320 atcaaaacaaaaatattttacaggggtgtgaatcaaaataaaaaatttacaggggaaaaccgaaaatgatctatatta 1693243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13286732 - 13286635
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattata-gggggtaaaaacctatt 96  Q
    ||||||| ||||||||||||||||| || ||||||| ||||| ||||||| |||| |||||||||||| ||||||||| | ||||||||| |||||||    
T  13286732 atcaaaagaaaaatattttacagggagtaaatcaaattaaaaattttacagggggaaaaccgaaaatgacctatattacatgggggtaaagacctatt 13286635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19979833 - 19979933
Alignment:
Q  1 atcaaaacaaaaatat-tttacagggggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||| || ||||||||||| |||||||||||||||||||||| |||  |||   |||||| | |||||||||||||||||| |||||||||    
T  19979833 atcaaaacaaaaacatatttacagggggcgaatcaaaataaaatttttacaggggaaaaataaaaaatgacatatattatagggggtaaagacctattaa 19979932  T
Q  99 c 99  Q
    |    
T  19979933 c 19979933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38193063 - 38192964
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg-ggaaaccgaaaatggcctatattata-gggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||| || | ||| || ||||| ||||||||| | ||||||||| |||||||||    
T  38193063 atcaaaacaaaaatattttacagggggtaaatcaaaataaaa-ttttacagggagaaaatcggaaatgacctatattacaggggggtaaagacctattaa 38192965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 48104683 - 48104783
Alignment:
Q  1 atcaaaacaaaaatattttacaggg-ggtgaatcaaaataaaatttttacacggggaaa-ccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||| |||| ||| ||| ||||||||| |||||||  |||||| ||||||||| ||||||||| ||| |||||| |||||||||    
T  48104683 atcaaaacaaaaatattttatagggtggtaaataaaaataaaaattttacagagggaaaaccgaaaatgacctatattacaggaggtaaagacctattaa 48104782  T
Q  99 c 99  Q
    |    
T  48104783 c 48104783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 43251699 - 43251797
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatatta-tagggggtaaaaacctatt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||  ||||||  |||  ||| |||||||| |||||||||  |||||||||| |||||||    
T  43251699 atcaaaacaaaaatatttaacagggggtgaatcaaaataaaaaatttacatgcggaaaaatcgaaaatgacctatattagaagggggtaaagacctatt 43251797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 19272317 - 19272215
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattataggg-ggtaaaaacctattaactca 102  Q
    |||||||||| |||||||||||| ||||||||||||||| ||||||| |   |||||  ||||| ||||||||| |||| |||||| |||||||||| ||    
T  19272317 aaaacaaaaaaattttacaggggctgaatcaaaataaaaattttacaggaaaaaaccagaaatgacctatattagagggaggtaaagacctattaaccca 19272218  T
Q  103 aat 105  Q
    |||    
T  19272217 aat 19272215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19272405 - 19272504
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||| |||||||||||| || || ||||||||||||||| |||||||   ||| ||||| |||||| ||||||||| |||||||||| |||||||||    
T  19272405 atcaaaataaaaatattttatagagg-tgaatcaaaataaaaattttacatgagggaaaaccaaaaatgacctatattacagggggtaaagacctattaa 19272503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16902292 - 16902391
Alignment:
Q  1 atcaaaacaaaaatattttacagg-gggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||| ||||||||||||||||| || ||||||||||||||| ||||||| |||  ||||| |||||| ||||||||| | |||||||| |||||||||    
T  16902292 atcaaagcaaaaatattttacaggaggttgaatcaaaataaaaattttacaggggaaaaaccaaaaatgacctatattaca-ggggtaaagacctattaa 16902390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 19410613 - 19410506
Alignment:
Q  1 atcaaaacaaaaatattttacagggg-gtgaatcaaaataaaatttttacacggg--gaaaccgaaaatggcctatatta-tagggggtaaaaacctatt 96  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||   |||||  ||||  |||||||||  |||||||||| |||||||    
T  19410613 atcaaaacaaaaatattttacaggggagtgaatcaaaataaaaattttacaggggaaaaaaccagaaataacctatattacaagggggtaaagacctatt 19410514  T
Q  97 aactcaaa 104  Q
    ||| ||||    
T  19410513 aacccaaa 19410506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 35097723 - 35097803
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaat-ttttacacggggaaaccgaaaatggcctatattatagggg 83  Q
    |||| |||||||||||||||||||| |||||||| ||||| ||||||| ||||||||  |||||| ||||||||| |||||    
T  35097723 aaaaaaaaaatattttacagggggtaaatcaaaaaaaaatattttacagggggaaacaaaaaatgacctatattacagggg 35097803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35913152 - 35913084
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttaca-cggggaaaccgaaaatg 67  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||  ||||||| ||||||||    
T  35913152 atcaaaacaaaaatattttacaagggggtgaatcaaaataaaaattttacaggggggaaatcgaaaatg 35913084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 13286819 - 13286921
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatatta-tagggggtaaaaacctatt 96  Q
    ||||||||||||||||||||||||||| | |||| |||||||| ||||||| ||||  |||||  ||||| |||||||||  |||||||||| |||||||    
T  13286819 atcaaaacaaaaatattttacagggggttaaatcgaaataaaaattttacaggggggaaaaccagaaatgacctatattacaagggggtaaagacctatt 13286918  T
Q  97 aac 99  Q
    |||    
T  13286919 aac 13286921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16902206 - 16902108
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg--gggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||| |||| ||||||||| ||| ||||||| |  || |||||| ||||| |||||||  ||| ||||||| |||||||||    
T  16902206 atcaaaacaaaaatattttacagagggtaaatcaaaatcaaaattttacagggaggaaaaccggaaatgacctatat--tagagggtaaagacctattaa 16902109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23314826 - 23314776
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  23314826 atcaaaacaaaaatattttacagaggggtgaatcaaaataaaaattttaca 23314776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 24374367 - 24374285
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattataggggg 84  Q
    ||||| |||||||||||||||||||| |||||||| |||  ||||||| |||| ||||| |||||| ||||||||| ||||||    
T  24374367 caaaaaaaaaatattttacagggggtaaatcaaaaaaaatattttacagggggaaaacccaaaatgacctatattacaggggg 24374285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24845741 - 24845640
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaa-atttt--tacacggggaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    ||||||||||||| |  ||||||||||| |||||||| ||| |||||  |||| ||| |||||||||||| ||||||||| ||| |||||| ||||||||    
T  24845741 atcaaaacaaaaaaaaattacagggggtaaatcaaaaaaaatattttactacaggggaaaaccgaaaatgacctatattacaggaggtaaagacctatta 24845642  T
Q  98 ac 99  Q
    ||    
T  24845641 ac 24845640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5021735 - 5021784
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  5021735 atcaaaacaaaaatattttacaggaagtgaatcaaaataaaaattttaca 5021784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 15037376 - 15037461
Alignment:
Q  16 ttttacagggggt-gaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattata-gggggtaaaaacctattaac 99  Q
    ||||||||||||| |||||||||||||| ||||||  |||||||||  ||||| ||||||||| | ||||||||| ||||||||||    
T  15037376 ttttacagggggttgaatcaaaataaaaattttacggggggaaaccagaaatgacctatattacaggggggtaaagacctattaac 15037461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26930736 - 26930687
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||||||||| |||||||| |||||| |||||||    
T  26930736 atcaaaacaaaaatattttacaggggttgaatcaacataaaaattttaca 26930687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 715353 - 715301
Alignment:
Q  130 tgcaaattaactcaaccgcaaagaacatattaatacaagactgagtaaaactt 182  Q
    |||||||||| |||||| |||||||||||||||||||| | ||||||||||||    
T  715353 tgcaaattaattcaaccacaaagaacatattaatacaacattgagtaaaactt 715301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 44414035 - 44414132
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttac-acggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||| ||||| ||||||||||||||| |||||| | ||  |||||  ||||| ||||||||| | |||||||| ||||||||||    
T  44414035 atcaaaacaaaaatattttagagggg-tgaatcaaaataaaaattttacaaaggaaaaaccataaatgacctatattaca-ggggtaaagacctattaac 44414132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24205306 - 24205348
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaa 42  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24205306 atcaaaacaaaaatattttacaggggggtgaatcaaaataaaa 24205348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24206824 - 24206866
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaa 42  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24206824 atcaaaacaaaaatattttacaggggggtgaatcaaaataaaa 24206866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26930820 - 26930870
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttaca 50  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  26930820 atcaaaacaaatatattttacagcggggtgaatcaaaataaaaattttaca 26930870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 34731680 - 34731638
Alignment:
Q  59 ccgaaaatggcctatattatagggggtaaaaacctattaactc 101  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  34731680 ccgaaaatgacctatattataggggataaaaacctattaactc 34731638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39119065 - 39119115
Alignment:
Q  1 atcaaaacaaaa-atattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  39119065 atcaaaacaaaaaatattttacaggaggtgaatcaaaataaaaattttaca 39119115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26050275 - 26050177
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaa--ccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||| | |||||||| ||||  |||| | |  ||||  ||||||||| ||||||||| |||||||||| |||||||||    
T  26050275 atcaaaacaaaaatattttacagggg-taaatcaaaacaaaaaattta-aggaagaaaaaccgaaaatgacctatattagagggggtaaagacctattaa 26050178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26059634 - 26059536
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaa--ccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||| | |||||||| ||||  |||| | |  ||||  ||||||||| ||||||||| |||||||||| |||||||||    
T  26059634 atcaaaacaaaaatattttacagggg-taaatcaaaacaaaaaattta-aggaagaaaaaccgaaaatgacctatattagagggggtaaagacctattaa 26059537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31186859 - 31186961
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttac--acggggaaaccgaaaatggcctatattatag-ggggtaaaaacctatt 96  Q
    ||||||||||||||||||||||| |||||||  |||||||||| ||||||  | | | ||||  |||||| |||||||||||| ||| |||| |||||||    
T  31186859 atcaaaacaaaaatattttacagaggggtgagccaaaataaaaattttacagaggtgaaaacaaaaaatgacctatattatagagggctaaagacctatt 31186958  T
Q  97 aac 99  Q
    |||    
T  31186959 aac 31186961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4518055 - 4518105
Alignment:
Q  1 atcaaaacaaaaatattttacagggggt-gaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||| || ||||| |||||||||||||| |||||||    
T  4518055 atcaaaacaaaaatattttccaaggggttgaatcaaaataaaaattttaca 4518105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 39065483 - 39065386
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||| | || ||||||||| |||||||| ||   ||||||| |||  |||||| ||||| ||||||||| |||||||||| |||||||||    
T  39065483 atcaaaacaaaaaaaatt-acagggggtaaatcaaaaaaattattttacaggggaaaaaccggaaatgacctatattacagggggtaaagacctattaa 39065386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 21237304 - 21237400
Alignment:
Q  2 tcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||||| ||  ||||| ||||||||| || ||   ||  ||||| ||| || ||||||||||||||||||||  |||||||||    
T  21237304 tcaaaacaaaaatattttacaaggattgaat-aaaataaaaattatagggggcaaaaccaaaagtgacctatattatagggggtaaatgcctattaac 21237400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 22335477 - 22335558
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattataggggg 84  Q
    |||| |||| ||||||||||||||| ||| |||| |||  ||||||| |||| ||||| |||||| ||||||||| ||||||    
T  22335477 aaaaaaaaattattttacagggggtaaataaaaaaaaatattttacagggggaaaaccaaaaatgacctatattacaggggg 22335558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23784768 - 23784808
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  23784768 atcaaaacaaaaatattttaca-gggatgaatcaaaataaaa 23784808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 3624141 - 3624189
Alignment:
Q  3 caaaacaaaaatattttacagg-gggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||||| |||| |||||||| |||| |||||||    
T  3624141 caaaacaaaaatattttacaggagggtaaatcaaaacaaaaattttaca 3624189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 4676012 - 4675944
Alignment:
Q  16 ttttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattataggggg 84  Q
    ||||||||||||| ||| |||| |||  ||||||| ||| ||||| |||||| ||||||||| ||||||    
T  4676012 ttttacagggggtaaataaaaaaaaatattttacaggggaaaaccaaaaatgacctatattacaggggg 4675944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12180790 - 12180890
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg-gggaaaccgaaaatggcctatattataggggg-taaaaacctattaa 98  Q
    |||||||||||  | ||||||| ||||| |||||||| | || ||||||| |  ||||| |||||||| ||||||||| |||||| |||| |||||||||    
T  12180790 atcaaaacaaattttttttacatggggtaaatcaaaaaataaattttacaggaaggaaatcgaaaatgacctatattacagggggataaagacctattaa 12180889  T
Q  99 c 99  Q
    |    
T  12180890 c 12180890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 24555920 - 24555956
Alignment:
Q  63 aaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  24555920 aaatgacctatattacagggggtaaaaacctattaac 24555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 45164091 - 45164174
Alignment:
Q  18 ttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatag-ggggtaaaaacctattaa 98  Q
    ||||||| ||||||||||||||||| ||||||| ||  | |||||  ||||| ||||||||| || |||||||| |||||||||    
T  45164091 ttacaggaggtgaatcaaaataaaaattttacaggggtgaaaaccagaaatgacctatattacagtggggtaaagacctattaa 45164174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27987398 - 27987299
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||| |||||| |||||||||||||||||||||||  |||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  27987398 atcaaaacaaatatatttcacagggggtgaatcaaaataaaaaatttacagggggaaaaccgaaaatgacctatattatagggggtaaagacctattaac 27987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28044700 - 28044601
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||| |||||| |||||||||||||||||||||||  |||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  28044700 atcaaaacaaatatatttcacagggggtgaatcaaaataaaaaatttacagggggaaaaccgaaaatgacctatattatagggggtaaagacctattaac 28044601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14329555 - 14329655
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg--gggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||||||| |  || |||||||||||| ||||||||| |||||||||| |||||||||    
T  14329555 atcaaaacaaaaatattttacaagggttaaatcaaaataaaatttttacagggaggaaaaccgaaaatgacctatattacagggggtaaagacctattaa 14329654  T
Q  99 c 99  Q
    |    
T  14329655 c 14329655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27198247 - 27198146
Alignment:
Q  1 atcaaaacaaaaa-tattttacagggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||   ||| |||||||||||| ||||||||| ||||| |||| ||||||||    
T  27198247 atcaaaacaaaaaatattttacagggggtgaatcaaaataaaaattttacaggagggaaaaccgaaaatgacctatattacaggggataaagacctatta 27198148  T
Q  98 ac 99  Q
    ||    
T  27198147 ac 27198146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 29726206 - 29726109
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||| |||||||||||||||  |||||||||||||||||| ||||||| ||| |||||  ||||| ||||||||| | ||||||||||||||||||    
T  29726206 atcaaaccaaaaatattttacatagggtgaatcaaaataaaagttttacatgggaaaaccagaaatgacctatattacatggggtaaaaacctattaa 29726109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7988978 - 7989027
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7988978 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 7989027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8315939 - 8316037
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca-cggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||  ||||||||   |||||  ||||| || |||||||||||||||||||||    
T  8315939 atcaaaacaaaaatattttaca-ggggtgaatcaaaataaaaattttacaggggggaaactagaaatgatctataatacagggggtaaaaacctattaac 8316037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 34019079 - 34019177
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||  | |||   |||||| ||||||||| ||||| |||| ||||||||    
T  34019079 atcaaaacaaaaatattttacaaggggtgaatcaaaataaaatttttacagggatgaaaataaaaaatgacctatattacaggggataaagacctatta 34019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25601903 - 25602002
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||| ||||||||||||  |||||||  |||  |||||||||| | ||||||||| | |||||||| |||||||||    
T  25601903 atcaaaacaaaaatattttacagggggtaaatcaaaataaacattttacagtgggaaaaaccgaaaa-gacctatattacatggggtaaagacctattaa 25602001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 43121181 - 43121082
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||  | |  ||||| |||||| | ||||||| ||||||||||  ||||||||    
T  43121181 atcaaaacaaaaatattttacagggg-tgaatcaaaataaaatttttacagagagaaaaaccaaaaatgacatatattaaagggggtaaatgcctattaa 43121083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 27987484 - 27987581
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||| |||||| |||||||||||||||  |||||| ||  |||||  |||||  |||||||| |||||||||| ||||||||||    
T  27987484 atcaaaacaaaaatattttgcagggg-tgaatcaaaataaaaaatttacagggaaaaaccagaaatgatctatattacagggggtaaagacctattaac 27987581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28044786 - 28044883
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||| |||||| |||||||||||||||  |||||| ||  |||||  |||||  |||||||| |||||||||| ||||||||||    
T  28044786 atcaaaacaaaaatattttgcagggg-tgaatcaaaataaaaaatttacagggaaaaaccagaaatgatctatattacagggggtaaagacctattaac 28044883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4105235 - 4105284
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  4105235 atcaaaacaaaaatattttatagggggtgaatcaaaataaaaattttaca 4105284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7988894 - 7988845
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  7988894 atcaaaacaaaaatattttacagggggtaaatcaaaataaaaattttaca 7988845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12330435 - 12330335
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||| |||||||| |||  ||||||| ||||  ||||   ||||  ||||||||| |||||||||| |||||||||    
T  12330435 atcaaaacaaaaatattttacagggggtaaatcaaaaaaaatattttacagggggaaaaactagaaataacctatattacagggggtaaagacctattaa 12330336  T
Q  99 c 99  Q
    |    
T  12330335 c 12330335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38500386 - 38500285
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg-ggaa-accgaaaatggcctatattata-gggggtaaaaacctatta 97  Q
    |||||||||||||||||||||||||||| |||||||| |||  ||||||| || |||| |||||||||| ||||||||  | ||||||||| ||||||||    
T  38500386 atcaaaacaaaaatattttacagggggtaaatcaaaaaaaatattttacagggaggaagaccgaaaatgacctatattgcaggggggtaaagacctatta 38500287  T
Q  98 ac 99  Q
    ||    
T  38500286 ac 38500285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 960468 - 960552
Alignment:
Q  16 ttttacagggggtgaatcaaaataaaatttttacacg-gggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||| ||||| ||||||||||||| ||||||| | || |||||| ||||| ||||||||| |||||||||| ||||||||||    
T  960468 ttttacaaggggtaaatcaaaataaaaattttacaggaggaaaaccggaaatgacctatattacagggggtaaagacctattaac 960552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 960373 - 960271
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatatta-tagggggtaaaaacctatt 96  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||   ||| |||||  ||||||||||| |||  |||||||||| || ||||    
T  960373 atcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttacaggagggaaaaccataaatggcctattttacaagggggtaaagacatatt 960274  T
Q  97 aac 99  Q
    |||    
T  960273 aac 960271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 25277663 - 25277761
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg--gggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||  ||||||||||| |||||||| || | ||||||| |  || |||||| ||||| ||||||||| |||||||||| ||||||||||    
T  25277663 caaaacaaaaataaattacagggggtaaatcaaaaaaataattttacaaggtggaaaaccggaaatgacctatattacagggggtaaagacctattaac 25277761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 43945263 - 43945165
Alignment:
Q  9 aaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaa--ccgaaaatggcctatattatagggggtaaaaacctattaactcaaat 105  Q
    ||||||| |||||||| ||| |||||||| |||  ||||||| |||||||  ||||||||| | ||||||| |||||||||| |||||||||| |||||    
T  43945263 aaaaataatttacaggcggtaaatcaaaagaaatattttacagggggaaaaaccgaaaatgacatatattacagggggtaaagacctattaacccaaat 43945165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26447538 - 26447579
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  26447538 atcaaaacaaaaatattttacaggggatgaatcaaaataaaa 26447579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27198330 - 27198371
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  27198330 atcaaaacaaaaatattttacagggggtgaataaaaataaaa 27198371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 36343244 - 36343135
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaactc- 101  Q
    ||||||||||| |||||||| ||||| ||||| || || | ||||||| ||||||| || |||||  |||||||| |||||||||||  |||||||| |     
T  36343244 caaaacaaaaacattttacaaggggtaaatcagaaaaataattttacagggggaaatcggaaatgatctatattacagggggtaaaacactattaaccct 36343145  T
Q  102 aaatttaaat 111  Q
    ||||||||||    
T  36343144 aaatttaaat 36343135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8388219 - 8388117
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg--tgaatcaaaat-aaaatttttacacg--gggaaaccgaaaatggcctatattatagggggtaaaaacctat 95  Q
    |||||||||||||||||||||||||||  | ||||||||| |||| ||||||| |  || |||||| ||||  ||||||||| |||||||||| ||||||    
T  8388219 atcaaaacaaaaatattttacaggggggttaaatcaaaataaaaaattttacagggaggaaaaccggaaattacctatattacagggggtaaagacctat 8388120  T
Q  96 taa 98  Q
    |||    
T  8388119 taa 8388117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40770628 - 40770533
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||| ||||||||||||||  |||||||| ||||||||| ||||| | ||| ||||| |||||| ||||||||| |  ||||||| ||||||||||    
T  40770628 atcaaaataaaaatattttaca--gggtgaataaaaataaaaattttataggggaaaaccaaaaatgacctatattaca-agggtaaatacctattaac 40770533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 3912454 - 3912535
Alignment:
Q  18 ttacagggggtgaatcaaaataaaatttttacacggggaaa-ccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||| |||||||| || ||||| ||| ||||||| ||||||||| ||||||||| |||||||||| || |||||||    
T  3912454 ttacagggggtaaatcaaaaaaatatttt-acagggggaaaaccgaaaatgacctatattacagggggtaaagacttattaac 3912535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4105150 - 4105102
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  4105150 atcaaaacaaaaatattttatagggg-tgaatcaaaataaaaattttaca 4105102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 4482143 - 4482047
Alignment:
Q  4 aaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacggggaaa-ccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||| || |||||||| |||||| ||| |||||||||  |||||| ||||||| ||| ||||| | ||||||| |||||||||||||||||||||    
T  4482143 aaaacaataaaattttacaagggggtaaat-aaaataaaaaatttacaaggggaaaaccggaaatgacatatattacagggggtaaaaacctattaac 4482047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14329478 - 14329429
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||| | ||||| ||||||||||||||| |||||||    
T  14329478 atcaaaacaaaaatatttcataggggttgaatcaaaataaaaattttaca 14329429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 15152245 - 15152333
Alignment:
Q  3 caaaacaaaaatattttac-agggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||||||||||||||||| ||||||| |||||||| |||  ||||||| ||||  ||||  |||||| ||||||||| ||||||||||    
T  15152245 caaaacaaaaatattttacaagggggtaaatcaaaaaaaatattttacaggggggaaaacaaaaaatgacctatattacagggggtaaa 15152333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 29309750 - 29309829
Alignment:
Q  23 gggggtgaatcaaaataaaatttttacacgggg---aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||| |||||||| |||  ||||||| ||||   |||||| ||||| ||||||||| |||||||||||||||||||||    
T  29309750 gggggtaaatcaaaaaaaatattttacagggggggaaaaccggaaatgacctatattacagggggtaaaaacctattaac 29309829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 18367118 - 18367039
Alignment:
Q  12 aatattttaca-gggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||||||||| |||||| |||||||| |||  ||||||| ||||  |||||||||||| ||||||||| ||||||||||    
T  18367118 aatattttacatgggggtaaatcaaaaaaaatattttacaggggggaaaaccgaaaatgacctatattacagggggtaaa 18367039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 34985218 - 34985174
Alignment:
Q  5 aaacaaaaatattttacagggggtgaatcaaaataaaatttttac 49  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||    
T  34985218 aaacaaacatattttacagagggtgaatcaaaataaaaattttac 34985174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 5160393 - 5160310
Alignment:
Q  3 caaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttaca-cggggaaaccgaaaatggcctatattataggggg 84  Q
    ||||| ||||||||||||||| ||||| |||||||| |||  |||||||  ||||||||| |||||| ||||||||| ||||||    
T  5160393 caaaaaaaaaatattttacaggggggtaaatcaaaaaaaatattttacaggggggaaaccaaaaatgacctatattacaggggg 5160310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 11105870 - 11105788
Alignment:
Q  4 aaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattataggggg 84  Q
    |||| ||||||||||||||| ||||| |||||||| |||  ||||||| |||| ||||| |||||| ||||||||| ||||||    
T  11105870 aaaaaaaaaatattttacaggggggtaaatcaaaaaaaatattttacagggggaaaaccaaaaatgacctatattacaggggg 11105788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25601816 - 25601766
Alignment:
Q  1 atcaaaacaaaaatattttac-agggggtgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||||| | ||| ||||||||||||||| |||||||    
T  25601816 atcaaaacaaaaatattttacaaagggttgaatcaaaataaaaattttaca 25601766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12330521 - 12330566
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttt 46  Q
    |||||||||||||||||||||||||| | |||||||| || |||||    
T  12330521 atcaaaacaaaaatattttacaggggataaatcaaaaaaatatttt 12330566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33641087 - 33641127
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    |||||||||||||||||||||||||||| ||| |||||||||    
T  33641087 atcaaaacaaaaatattttacagggggtaaat-aaaataaaa 33641127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 2696703 - 2696666
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataa 40  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  2696703 atcaaaacaaaaatattttaca--gggtgaatcaaaataa 2696666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 3912341 - 3912253
Alignment:
Q  18 ttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattata-gggggtaaaaacctattaactcaaa 104  Q
    ||||||||||| |||||||| |||  ||||||| |||| |||||| ||||| ||||||||| | ||||||||| |||| ||||| ||||    
T  3912341 ttacagggggtaaatcaaaaaaaatattttacagggggaaaaccggaaatgacctatattacaggggggtaaagacctgttaacccaaa 3912253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 13759490 - 13759554
Alignment:
Q  13 atattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatatt 76  Q
    |||||||||||||||| |||||||| |||  ||||||| |||| ||||| |||||| ||||||||    
T  13759490 atattttacagggggtaaatcaaaaaaaatattttacagggggaaaaccaaaaatgacctatatt 13759554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 19158030 - 19157943
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||| || ||||||||||||||||| |||||||| ||   ||||||| ||||  ||||| |||||| ||||||| | ||||||||||    
T  19158030 caaaaaaataatattttacagggggtaaatcaaaaaaactattttacaggggggaaaaccaaaaatgacctatataacagggggtaaa 19157943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 23564186 - 23564115
Alignment:
Q  16 ttttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||||||||||| |||||||| |||  ||||||| ||| ||||  |||||| ||||||||| ||||||||||    
T  23564186 ttttacagggggtaaatcaaaa-aaatattttacaggggaaaacaaaaaatgacctatattacagggggtaaa 23564115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31861593 - 31861493
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||||| ||||| ||||||||| ||||| |||| |||||||||    
T  31861593 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaaggggaaaaaccggaaatgacctatattacaggggataaagacctattaa 31861494  T
Q  99 c 99  Q
    |    
T  31861493 c 31861493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 20688897 - 20688801
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctatt 96  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||| |||  |||||||||||| ||||||||| ||| |||||| |||||||    
T  20688897 atcaaaacaaaaatattttacagggggtgaattaaaataaaaattttacaagggaaaaaccgaaaatgacctatattacaggaggtaaagacctatt 20688801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 40339500 - 40339595
Alignment:
Q  9 aaaaatattttacag-ggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaactcaaa 104  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| ||| |||||| ||||| ||||||||||||||||| ||||||||||||| ||||    
T  40339500 aaaaatattttacagaggggtgaatcaaaataaaaattttacaagggaaaaccggaaatgacctatattatagggggt-aaaacctattaacccaaa 40339595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33052919 - 33052819
Alignment:
Q  1 atcaaaacaaaaatattttacagggggt-gaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||   |||||| ||||||||| | |||||||| |||||||||    
T  33052919 atcaaaacaaaaatattttacagggggttgaatcaaaataaaatttttacagggggaaaataaaaaatgacctatattacaaggggtaaagacctattaa 33052820  T
Q  99 c 99  Q
    |    
T  33052819 c 33052819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31861681 - 31861793
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatatta-tagggggtaaaaacctatta 97  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||  | ||| |  ||||| | |||||||  |||||||||| ||||||||    
T  31861681 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaagggtgaaaatcagaaatgacatatattacaagggggtaaagacctatta 31861780  T
Q  98 actcaaatttaaa 110  Q
    || ||||||||||    
T  31861781 acccaaatttaaa 31861793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37204935 - 37205035
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||   | | |||||||||||| ||||||||| || ||||||| || ||||||    
T  37204935 atcaaaacaaaaatattttacagggggtaaatcaaaataaattttttacaggagtgaaaaccgaaaatgacctatattacagagggtaaagacatattaa 37205034  T
Q  99 c 99  Q
    |    
T  37205035 c 37205035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38482420 - 38482320
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg--gggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||| |  || |||||  || || ||||||||| |||||||||| |||||||||    
T  38482420 atcaaaataaaaatattttacaggggatgaatcaaaataaaatttttacagggaggaaaaccagaattgacctatattacagggggtaaagacctattaa 38482321  T
Q  99 c 99  Q
    |    
T  38482320 c 38482320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 29104545 - 29104446
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg-ggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||||| || || ||||||||| ||| ||||||| || | |||| ||||||| ||||||||| |||||||||| ||||||||||    
T  29104545 atcaaaacaaaaatattttacatggagtaaatcaaaattaaaattttacagggagaaaactgaaaatgacctatattacagggggtaaagacctattaac 29104446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 35798638 - 35798738
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg--gggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||| | |  || |||||||||||| ||||||||| ||||| |||| ||||| |||    
T  35798638 atcaaaacaaaaatattttactggaggtgaatcaaaataaaaattttatatggaggaaaaccgaaaatgacctatattacaggggataaagacctactaa 35798737  T
Q  99 c 99  Q
    |    
T  35798738 c 35798738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9227039 - 9227140
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggg-gtaaaaacctatta 97  Q
    |||||||||||||||||||||||||||| |||||||| |||  ||||||| ||||  |||||  ||||| ||||||||| ||||| ||||| ||||||||    
T  9227039 atcaaaacaaaaatattttacagggggtaaatcaaaaaaaatattttacaggggggaaaaccagaaatgacctatattacaggggtgtaaagacctatta 9227138  T
Q  98 ac 99  Q
    ||    
T  9227139 ac 9227140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 12383005 - 12383099
Alignment:
Q  7 acaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagg-gggtaaaaacctattaac 99  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||| |||| ||| |||||||| ||||||||| ||| |||||||  |||||||||    
T  12383005 acaaaaatattttacggggggtgaattaaaataaaaattttacagggggaaaatcgaaaatgacctatattacaggagggtaaaggcctattaac 12383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21149055 - 21149155
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatc-aaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    |||||||||||||||||||||||||||| |||| ||||||||| ||||||| ||  | ||||| |||||| ||||||||| | |||||||| ||||||||    
T  21149055 atcaaaacaaaaatattttacagggggtaaatcaaaaataaaaattttacagggaagaaaaccaaaaatgacctatattaca-ggggtaaagacctatta 21149153  T
Q  98 ac 99  Q
    ||    
T  21149154 ac 21149155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24098535 - 24098437
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg--gggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||| |  |  ||||| |||||  |||||||||||  ||||||| |||||||||    
T  24098535 atcaaaacaaaattattttacagggggtgaatcaaaataaaaattttacaggaagaaaaaccaaaaataacctatattata--gggtaaagacctattaa 24098438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 21148900 - 21148805
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||  |||||  ||||| ||||||||| | |||||||||||||||||    
T  21148900 atcaaaacaaaaatattttacagcgggttgaatcaaaataaaaattttaca-ggaaaaaccagaaatgacctatattaca-ggggtaaaaacctatta 21148805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24098619 - 24098718
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||   ||| ||||| |||||| ||||||||| | ||| |||| |||||||||    
T  24098619 atcaaaacaaaaatattttaca-cgggtgaatcaaaataaaaattttacaggagggaaaaccaaaaatgacctatattacaagggctaaagacctattaa 24098717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42119244 - 42119300
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaa 58  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  42119244 atcaaaacaaaaatattttacagggg-tgaatcaaaataaaaattttacagggggaaa 42119300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 8186079 - 8186023
Alignment:
Q  133 aaattaactcaaccgcaaagaacatattaatacaagactgagtaaaacttactttct 189  Q
    ||||||| ||||| ||||||||||||||||||||| | |||||||||||||||||||    
T  8186079 aaattaattcaactgcaaagaacatattaatacaacattgagtaaaacttactttct 8186023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 20688985 - 20689082
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaa-accgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||| |||||||||||||||| || ||||||| ||  || | |  ||||| ||||||||| |||||||||| |||||||||    
T  20688985 atcaaaacaaaaatattttaca-ggggtgaatcaaaatagaaattttacatggaaaataacataaatgacctatattacagggggtaaagacctattaa 20689082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39153579 - 39153621
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaat 43  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  39153579 atcaaaacaaaaatattttacagggggtaaatcaaaataaaat 39153621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22551703 - 22551759
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaa 58  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||    
T  22551703 atcaaaacaaaa-tattttacagggggtaaatcaaaataaaaattttacagggggaaa 22551759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 22642221 - 22642127
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaa-accgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||| | ||| |||| |||    ||||| |||||| |||||||||| ||||||||| ||||||| || |||||||||    
T  22642221 atcaaaacaaaaatattttacaggggataaataaaaaaaaa----ttacagggggaataccgaaaatgacctatattacagggggtgaagacctattaa 22642127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 26592425 - 26592321
Alignment:
Q  1 atcaaaacaaaaatattttacagg-gggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattata-gggggtaaaaacctatt 96  Q
    |||||||||||||||||||| ||  |||||||||||||||||| |||||||   ||| |||||  ||||| | ||||||||| ||||||||| |||||||    
T  26592425 atcaaaacaaaaatattttatagatgggtgaatcaaaataaaaattttacaggagggaaaaccagaaatgacttatattatatgggggtaaagacctatt 26592326  T
Q  97 aactc 101  Q
    |||||    
T  26592325 aactc 26592321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20698475 - 20698575
Alignment:
Q  1 atcaaaacaaaaatattttacagggg-gtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||| ||||| |||||||||||||||| || |||| |||  |||||  ||||| ||||||||| |||  ||||| |||||||||    
T  20698475 atcaaaacaaaaatattttataggggtgtgaatcaaaataaaaattctacaggggaaaaaccagaaatgacctatattacaggaagtaaagacctattaa 20698574  T
Q  99 c 99  Q
    |    
T  20698575 c 20698575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 22551615 - 22551524
Alignment:
Q  11 aaatattttacaggggg-tgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||| ||||||||||||||| ||||||| | ||  |||   |||||| ||||||||| |||||||||| ||||||||||    
T  22551615 aaatattttacagggggatgaatcaaaataaaaattttacaggaggaaaaataaaaaatgacctatattacagggggtaaagacctattaac 22551524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 39418906 - 39419013
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttac--acggggaaaccgaaaatggcctatattata-gggggtaaaaacctatta 97  Q
    |||||||||||||||||||| || |||| |||||||| |||  ||||||  | ||| |||||| ||||| ||||||||| | ||||||||| ||||||||    
T  39418906 atcaaaacaaaaatattttatagagggtaaatcaaaaaaaatattttacagaggggaaaaccggaaatgacctatattacaggggggtaaagacctatta 39419005  T
Q  98 actcaaat 105  Q
    || |||||    
T  39419006 acccaaat 39419013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40339433 - 40339333
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacgg-ggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||||||| ||||||||||| ||| ||||||| || | ||| |  ||||| | ||||||| ||| ||||||||| ||||||    
T  40339433 atcaaaacaaaaatattttacagggggttgaatcaaaatcaaaattttacagggagaaaatcagaaatgacatatattacaggaggtaaaaacttattaa 40339334  T
Q  99 c 99  Q
    |    
T  40339333 c 40339333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 4221940 - 4222011
Alignment:
Q  18 ttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaa 89  Q
    ||||||||||| |||||||| |||  ||||||| ||| ||||| |||||| ||||||||| |||||||||||    
T  4221940 ttacagggggtaaatcaaaaaaaatattttacaggggaaaaccaaaaatgacctatattacagggggtaaaa 4222011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12382928 - 12382829
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||||| ||| | ||||||||||||||| ||||||| ||| |||   |||||| ||||||||  ||| |||||| || |||||||    
T  12382928 atcaaaacaaaaatattttaccgggagctgaatcaaaataaaaattttacaggggaaaataaaaaatgacctatattgcaggaggtaaagacttattaac 12382829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 33053004 - 33053102
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattata-gggggtaaaaacctattaac 99  Q
    |||||||||||||||||| ||||||||| ||||  |||||||  |||| | ||| |||||  ||||||||||||||| | ||||||||| ||||||||||    
T  33053004 atcaaaacaaaaatatttaacagggggtaaatcttaataaaaaattta-aggggaaaacccgaaatggcctatattacaggggggtaaagacctattaac 33053102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 711341 - 711239
Alignment:
Q  1 atcaaaacaaaaatattttac-agggggtgaatcaaaataaaat-ttttacacgggg-aaaccgaaaatggcctatattata-gggggtaaaaacctatt 96  Q
    |||||||||||||||||| || ||||||| |||||||| ||||| ||||||| |||| |||||  ||||| ||||||||| | ||||||||| |||||||    
T  711341 atcaaaacaaaaatatttcacaagggggtaaatcaaaaaaaaatattttacagggggaaaaccataaatgacctatattacaggggggtaaagacctatt 711242  T
Q  97 aac 99  Q
    |||    
T  711241 aac 711239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 29754150 - 29754066
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattataggggg 84  Q
    ||||||| ||||||||  |||||||| ||||| ||||||||| ||||||| ||||  |||||| ||||| ||||||||||||||||    
T  29754150 atcaaaataaaaatatgatacagggg-tgaattaaaataaaaattttacaggggggaaaaccggaaatgacctatattataggggg 29754066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 35798558 - 35798512
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||    
T  35798558 aaaacaaaaatattttacaggtgatgaatcaaaataaaaattttaca 35798512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 16431516 - 16431601
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||| ||| ||||||||||||| || |||||||  |||  ||||||| ||| ||||  |||||| ||||||||||||||||||||    
T  16431516 caaaaaaaatatattttacagggagtaaatcaaacaaaatattttacaggggaaaacaaaaaatgacctatattatagggggtaaa 16431601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36354739 - 36354779
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  36354739 atcaaaacaaaaatattttaca-ggggtgaatcaaaataaaa 36354779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 12399574 - 12399641
Alignment:
Q  34 aaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||| |||||| ||||  |||||||||||  ||||||||| |||||||||| ||||||||||    
T  12399574 aaaataaaatatttacaggggggaaaaccgaaaataacctatattacagggggtaaagacctattaac 12399641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 30916528 - 30916480
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaaacctattaactcaaa 104  Q
    |||||||||||| | |||||||||||||||||||| |||||||| ||||    
T  30916528 aaaccgaaaatgacatatattatagggggtaaaaaactattaacccaaa 30916480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 9751633 - 9751731
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||| |||||||| ||   ||||||||| ||||  |||||| ||||  ||||| ||| || ||||||||| ||||||||||| |||||||||    
T  9751633 caaaacaaaaaaattttacaaggaccgaatcaaaaaaaaaaatttacagggggcaaaaccaaaagtgacctatattacagggggtaaaagcctattaac 9751731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 10598418 - 10598332
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaa 88  Q
    |||| |||||||||||||||||||| ||| |||| |||  ||||||| ||||  ||||  |||||| ||||||||| ||||||||||    
T  10598418 aaaaaaaaaatattttacagggggtaaataaaaaaaaatattttacaggggggaaaacaaaaaatgacctatattacagggggtaaa 10598332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 15395600 - 15395546
Alignment:
Q  45 tttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||| ||||||||| ||| || ||||| ||| |||||||||||||||||||||    
T  15395600 tttacagggggaaaccaaaagtgacctattttacagggggtaaaaacctattaac 15395546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24329471 - 24329572
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaat-aaaatttttacacggg--gaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    ||||||||||||||||||||||    |||||||||||| |||| ||||||| |||   |||||| ||| | ||||||||| | |||||||| ||||||||    
T  24329471 atcaaaacaaaaatattttacaaatagtgaatcaaaataaaaaattttacaggggaaaaaaccggaaacgacctatattacaaggggtaaagacctatta 24329570  T
Q  98 ac 99  Q
    ||    
T  24329571 ac 24329572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 28277420 - 28277501
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattataggggg 84  Q
    |||| ||||| | |||||||||||| |||||||| |||| ||||||| |||| ||||  |||||| ||||||||| ||||||    
T  28277420 aaaaaaaaaaaaatttacagggggtaaatcaaaaaaaaaattttacagggggaaaacaaaaaatgacctatattacaggggg 28277501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12330956 - 12330856
Alignment:
Q  1 atcaaaacaaaaatattttac-agggggtgaatcaaaataaaatttttaca-cggggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||| || |||| |||||||| |||  |||||||  ||  ||||| |||||| ||||||||| ||||| |||| || ||||||    
T  12330956 atcaaaacaaaaatattttacaagagggtaaatcaaaaaaaatattttacagaggaaaaaccaaaaatgacctatattacaggggttaaagacatattaa 12330857  T
Q  99 c 99  Q
    |    
T  12330856 c 12330856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33483080 - 33483120
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataa 40  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  33483080 atcaaaacaaaaatattttacagagaggtgaatcaaaataa 33483120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 6e-26; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28149621 - 28149721
Alignment:
Q  1 atcaaaacaaaaatattttacaggg-ggtgaatcaaaataaaatttttacacggggaaa-ccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||| || ||||||||||||||||| ||||||| ||||||| ||| ||||| ||||||||| ||||||||||||||||||||    
T  28149621 atcaaaacaaaaatattttacaaggcggtgaatcaaaataaaaattttacagggggaaaaccggaaatgacctatattacagggggtaaaaacctattaa 28149720  T
Q  99 c 99  Q
    |    
T  28149721 c 28149721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3364516 - 3364616
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||| ||||  |||||||||||| | ||||||| |||||||||| |||||||||    
T  3364516 atcaaaacaaaaatattttacaggagatgaatcaaaataaaaattttacaaggggaaaaaccgaaaatgacttatattacagggggtaaagacctattaa 3364615  T
Q  99 c 99  Q
    |    
T  3364616 c 3364616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 30371487 - 30371387
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||  ||||| |||||| ||||||||| |||| ||||| |||||||||    
T  30371487 atcaaaacaaaaatattttacagggggtgaataaaaataaaaattttacaggggggaaaaccaaaaatgacctatattacagggagtaaagacctattaa 30371388  T
Q  99 c 99  Q
    |    
T  30371387 c 30371387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 28484547 - 28484646
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg--gggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |  || ||||| |||||| ||||||||| |||| ||||| |||||||||    
T  28484547 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacagggcggaaaaccaaaaatgacctatattacagggagtaaagacctattaa 28484646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16577304 - 16577402
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||||  |||||||||  ||||  ||||||||| |||||||||| ||||||||||    
T  16577304 atcaaaacaaaaatattttataggggatgaatcaaaataaattttttacggggggaaaccagaaataacctatattacagggggtaaagacctattaac 16577402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28149536 - 28149435
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatag-ggggtaaaaacctatta 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||  | |||||  ||||| ||||||||| || |||||||| ||||||||    
T  28149536 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacagggatgaaaaccagaaatgacctatattacagaggggtaaagacctatta 28149437  T
Q  98 ac 99  Q
    ||    
T  28149436 ac 28149435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 29098120 - 29098022
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||  ||||| | ||||||| | |||||||| |||||||||    
T  29098120 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacagggggaaaaccagaaatgacttatattacaaggggtaaagacctattaa 29098022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17328194 - 17328094
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||| ||||||||||| || ||||||||||||| ||||||| ||||  |||||| ||||| ||||||||| |||||||||| |||||||||    
T  17328194 atcaaaacaaaaacattttacagggtgtaaatcaaaataaaaattttacaggggggaaaaccggaaatgacctatattacagggggtaaagacctattaa 17328095  T
Q  99 c 99  Q
    |    
T  17328094 c 17328094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 37147653 - 37147553
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||| | |||||||||||||||||||| |||| || |||| |||||| ||||| ||||||||| |||||||||| |||||||||    
T  37147653 atcaaaacaaaaatattttataagggggtgaatcaaaataaaaattttgcagggggaaaaccggaaatgacctatattacagggggtaaagacctattaa 37147554  T
Q  99 c 99  Q
    |    
T  37147553 c 37147553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1499068 - 1499145
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatatt 76  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||  |||||||||||| ||||||||    
T  1499068 atcaaaacaaaaatattttaaagggggtgaatcaaaataaaaattttacaggggggaaaaccgaaaatgacctatatt 1499145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38386035 - 38385937
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||||  |  |||||| ||||| ||||||||| |||||||||| ||||||||||    
T  38386035 atcaaaacaaaaacattctacaggaggtgaatcaaaataaaaattttacagagaaaaaccggaaatgacctatattacagggggtaaagacctattaac 38385937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 85542 - 85441
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatatta-tagggggtaaaaacctatta 97  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||||| |||  |||||||||||| |||||||||  |||||||||| ||||||||    
T  85542 atcaaaacaaaaatattttacagggggatgaatcaaaataaaaaatttacaggggaaaaaccgaaaatgacctatattacaagggggtaaagacctatta 85443  T
Q  98 ac 99  Q
    ||    
T  85442 ac 85441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38210966 - 38210866
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||| ||  | |||||  ||||  ||||||||| |||||||||| |||||||||    
T  38210966 atcaaaacaaaaatattttacaggaggtgaatcaaaataaaaattttacaggggagaaaaccagaaattacctatattacagggggtaaagacctattaa 38210867  T
Q  99 c 99  Q
    |    
T  38210866 c 38210866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 18665775 - 18665677
Alignment:
Q  5 aaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatatta-tagggggtaaaaacctattaac 99  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||  ||| |||||||| |||||||||  |||||||||| ||||||||||    
T  18665775 aaacataaatattttacagggggatgaatcaaaataaaaattttacacgggggaaaatcgaaaatgacctatattacaagggggtaaagacctattaac 18665677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 22535554 - 22535456
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaa-ccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||| ||||| | ||||| ||||||| ||||||| ||| ||| ||||||||| ||||||||| |||||||||| ||||||||||    
T  22535554 atcaaaacaaaaatattttatagggg-taaatcagaataaaaattttacaagggaaaaaccgaaaatgacctatattaaagggggtaaagacctattaac 22535456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 17328280 - 17328380
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| | |||| |||||  ||||| | |||| || |||||||||| |||||||||    
T  17328280 atcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttatagggggaaaaccagaaatgacatataatacagggggtaaagacctattaa 17328379  T
Q  99 c 99  Q
    |    
T  17328380 c 17328380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28484461 - 28484414
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaattttta 48  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28484461 atcaaaacaaaaatattttacagggggtgaatcaaaataaatttttta 28484414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23260421 - 23260375
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaattttt 47  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  23260421 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaatttt 23260375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37147740 - 37147841
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatag-ggggtaaaaacctatta 97  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||||| ||  | |||||  ||||| ||||||||| || |||||||| ||||||||    
T  37147740 atcaaaacaaaaatattttacagaaggtgaatcaaaataaattttttacagggatgaaaaccagaaatgacctatattacagtggggtaaagacctatta 37147839  T
Q  98 ac 99  Q
    ||    
T  37147840 ac 37147841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 38386117 - 38386214
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||||||||| ||||||||||||||| || |||| ||  ||||| |||||  ||||||||| ||||| |||| || |||||||    
T  38386117 atcaaaacaaaaatattttacagggg-tgaatcaaaataaaaattatacagggaaaaaccaaaaataacctatattacaggggataaagacatattaac 38386214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1498988 - 1498939
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  1498988 atcaaaacaaaaatattttacatggggtgaatcaaaataaaaattttaca 1498939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 19493424 - 19493503
Alignment:
Q  22 agggggtgaatcaaaataaaatt--tttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||||| |  |||||| ||  |||||||||||| ||||||||| |||||||||| ||||||||||    
T  19493424 agggggtgaatcaaaataaaaatattttacagggaaaaaccgaaaatgacctatattacagggggtaaagacctattaac 19493503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22535638 - 22535738
Alignment:
Q  1 atcaaaacaaaaatattttacagggggt-gaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||| |||||||  |||| |||||||||||||| ||||||| |||| |||||  ||||| ||||||||| ||| |||||| |||||||||    
T  22535638 atcaaaacaaaaatgttttacaaagggttgaatcaaaataaaaattttacagggggaaaaccagaaatgacctatattacaggaggtaaagacctattaa 22535737  T
Q  99 c 99  Q
    |    
T  22535738 c 22535738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 5558321 - 5558234
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaa 89  Q
    ||||| ||| |||||||||||||||| |||||||| |||  ||||||| |||| ||||| |||||| ||||||||| |||||||||||    
T  5558321 caaaaaaaacatattttacagggggtaaatcaaaaaaaatattttacaggggggaaaccaaaaatgacctatattacagggggtaaaa 5558234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19052127 - 19052228
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||| |   ||| |||||  ||||| | ||||||| |||||||||| ||||||||    
T  19052127 atcaaaacaaaaatattttataggggggtgaatcaagataaaatttttagaggagggaaaaccagaaatgacatatattacagggggtaaagacctatta 19052226  T
Q  98 ac 99  Q
    ||    
T  19052227 ac 19052228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 39341326 - 39341400
Alignment:
Q  15 attttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaa 89  Q
    |||||||||||||| |||||||| |||  ||||||| ||| ||||| |||||| ||||||||| |||||||||||    
T  39341326 attttacagggggtaaatcaaaaaaaatattttacaggggaaaaccaaaaatgacctatattacagggggtaaaa 39341400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9011858 - 9011809
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  9011858 atcaaaacaaaaatattttacggagggtgaatcaaaataaaaattttaca 9011809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16577217 - 16577168
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||||||| || ||||||||||||| |||||||||    
T  16577217 atcaaaacaaaaatattttacagaggatgaatcaaaataagatttttaca 16577168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 29098207 - 29098303
Alignment:
Q  4 aaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| | ||  | ||||| |||||| ||||||||| |  ||||||| ||||||||||    
T  29098207 aaaacaaaaatattttacaggggggtgaatcaaaataaaaattttataagggagaaaaccaaaaatgacctatattaca--gggtaaagacctattaac 29098303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 85626 - 85724
Alignment:
Q  1 atcaaaacaaaaatattttacagg-gggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||| ||||||||||||||||| ||||||||||||||||  |||||    ||| ||| |||||||| ||||||||| | |||||||| ||||||||||    
T  85626 atcaaatcaaaaatattttacaggagggtgaatcaaaataattttttttgcagggaaaatcgaaaatgacctatattaca-ggggtaaagacctattaac 85724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 9011941 - 9011980
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  9011941 caaaacaaaaatattttacaaggggtgaatcaaaataaaa 9011980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3364428 - 3364329
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||| |||||| |||||||||||||||||||  |||| | ||    |||||||||||| | ||||||| ||||| |||| |||||||||    
T  3364428 atcaaaacaaaaatactttaca-ggggtgaatcaaaataaaaaatttatagggaaaaaaaccgaaaatgacttatattacaggggataaagacctattaa 3364330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 25228014 - 25228067
Alignment:
Q  2 tcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg 55  Q
    ||||||||||||||||||||||||||| |||||||| |||  ||||||| ||||    
T  25228014 tcaaaacaaaaatattttacagggggtaaatcaaaaaaaatattttacaggggg 25228067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37243522 - 37243481
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  37243522 atcaaaacaaaaatattttacagtggatgaatcaaaataaaa 37243481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39227982 - 39228023
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    ||||||||||||||||||||||| |||||||||| |||||||    
T  39227982 atcaaaacaaaaatattttacagagggtgaatcataataaaa 39228023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 11094022 - 11093979
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||| |||||||||||||||||||||  ||||||||    
T  11094022 aaaccgaaaatgacctatattatagggggtaaaacactattaac 11093979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 12028275 - 12028200
Alignment:
Q  25 gggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||| ||||||| |||  ||| | |||||| ||||||||| |||| ||||| ||||||||||    
T  12028275 gggtgaatcaaaataaaaattttacaggggaaaaatcaaaaatgacctatattacagggtgtaaagacctattaac 12028200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 18543969 - 18544051
Alignment:
Q  9 aaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaa 89  Q
    |||||||||||||||||||| |||||||| |||  ||||||| ||||  ||||  |||||| ||||||||| || ||||||||    
T  18543969 aaaaatattttacagggggtcaatcaaaaaaaatattttacagggggaaaaacaaaaaatgacctatattacagagggtaaaa 18544051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 22116200 - 22116157
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||    
T  22116200 aaaccgaaaatgacctatattacagggggtaaagacctattaac 22116157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 24413775 - 24413842
Alignment:
Q  16 ttttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggg 83  Q
    ||||||||||||| |||||||| |||  ||||||| ||||||||| |||||| | ||||||| |||||    
T  24413775 ttttacagggggtaaatcaaaaaaaatattttacagggggaaaccaaaaatgacttatattacagggg 24413842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25926986 - 25926943
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatt 44  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||    
T  25926986 atcaaaacaaaaatattttacagggggtaaataaaaaaaaaatt 25926943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 45464623 - 45464666
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||    
T  45464623 aaaccgaaaatgacctatattacaggaggtaaaaacctattaac 45464666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 24952003 - 24951917
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||| ||| |||||||||||||||| ||| |||| |||  ||||||| |||| ||||| |||||| ||||||||| ||||| ||||    
T  24952003 caaaaaaaatatattttacagggggtaaataaaaaaaaatattttacagggggaaaaccaaaaatgacctatattacaggggttaaa 24951917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 28110351 - 28110314
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  28110351 aaaacaaaaatattttaca-ggggtgaatcaaaataaaa 28110314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 38210988 - 38211018
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaa 31  Q
    |||||||||||||||||||||||||||||||    
T  38210988 atcaaaacaaaaatattttacagggggtgaa 38211018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 40385440 - 40385513
Alignment:
Q  13 atattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattataggggg 84  Q
    |||||||||||||||| |||||||| |||  ||||||| ||||  ||||  |||||| ||||||||||||||||    
T  40385440 atattttacagggggtaaatcaaaaaaaatattttacatgggggaaaacaaaaaatgacctatattataggggg 40385513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 41089243 - 41089157
Alignment:
Q  15 attttacaggg-ggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||| ||||||||||||||||| ||||||| |||  |||  ||||||| ||||||||| || || |||| ||||||||||    
T  41089243 attttacagggaggtgaatcaaaataaaaattttacaggggaaaaattgaaaatgacctatattacagaggttaaagacctattaac 41089157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12693677 - 12693598
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg---aaaccgaaaatggcctatatta 77  Q
    ||||||||||||||| |||||||||||| |||||||| ||   |||||||  |||   |||||||||||| |||||||||    
T  12693677 atcaaaacaaaaatactttacagggggtaaatcaaaaaaattattttacagaggggaaaaaccgaaaatgacctatatta 12693598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 21593246 - 21593173
Alignment:
Q  16 ttttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaa 89  Q
    ||||||||||||| |||||||| | |  ||||| | |||||||||| ||||| ||| ||||| |||||||||||    
T  21593246 ttttacagggggtaaatcaaaaaagatattttatagggggaaaccggaaatgacctttattacagggggtaaaa 21593173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 33941257 - 33941180
Alignment:
Q  22 agggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||| |||||||| |||  ||||||| ||| ||| || ||||| ||||||||||||| |||||| | ||||||||    
T  33941257 agggggtaaatcaaaaaaaatattttacaggggaaaatcggaaatgacctatattataggaggtaaagatctattaac 33941180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 43301918 - 43301877
Alignment:
Q  63 aaatggcctatattatagggggtaaaaacctattaactcaaa 104  Q
    ||||| ||||||||| |||||||||| |||||||||||||||    
T  43301918 aaatgacctatattacagggggtaaagacctattaactcaaa 43301877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 17688118 - 17688198
Alignment:
Q  9 aaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaa 89  Q
    ||||||||| |||||| ||| ||| |||| |||  ||||||| ||| ||||  |||||| ||||||||| |||||||||||    
T  17688118 aaaaatattatacaggaggtaaataaaaaaaaatattttacaggggaaaacaaaaaatgacctatattacagggggtaaaa 17688198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 30180856 - 30180920
Alignment:
Q  20 acagggggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggg 83  Q
    ||||| ||||||||||||||||| ||||||| |||  |||||| ||||| ||||||||| |||||    
T  30180856 acaggaggtgaatcaaaataaaaattttacaggggaaaaaccggaaatgacctatattagagggg 30180920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 33441590 - 33441518
Alignment:
Q  17 tttacagggggtgaatcaaaataaaatttttaca-cggggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    |||||||||||| |||||||| |||  |||||||  ||||||||| |||||  ||||||||| ||||||||||    
T  33441590 tttacagggggtaaatcaaaaaaaatattttacaggggggaaaccaaaaataacctatattacagggggtaaa 33441518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 33641177 - 33641129
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaaacctattaactcaaa 104  Q
    |||||||||||| ||||||||| || ||||||| |||||||||| ||||    
T  33641177 aaaccgaaaatgacctatattacagagggtaaagacctattaacccaaa 33641129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 38625095 - 38625190
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg-ggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||| | | ||||||||||||||| ||||||| || | ||| |  ||||| | ||||||| |||||||||| | ||||||||    
T  38625095 aaaacaaaaatattttaca-gagatgaatcaaaataaaaattttacagggagaaaatcagaaatgacatatattacagggggtaaagatctattaac 38625190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 1e-24; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3548310 - 3548416
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatag-ggggtaaaaacctatta 97  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||  ||||||||| || |||||||| ||||||||    
T  3548310 atcaaaacaaaaatattttacaagggggtgaatcaaaataaaatttttacagggggaaaaccgaaaataacctatattacagaggggtaaagacctatta 3548409  T
Q  98 actcaaa 104  Q
    || ||||    
T  3548410 acccaaa 3548416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 5417222 - 5417320
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg-gggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||  | | ||||||| ||||| ||||||||| ||| ||||||||||||||||    
T  5417222 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttactggagagaaaccggaaatgacctatattacaggaggtaaaaacctattaa 5417320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 49872904 - 49873004
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||| ||||||||||||||||||||  |||||| |||| |||||| ||||| ||||||||| |||||||||| |||||||||    
T  49872904 atcaaaacaaaaatattttacaagggggtgaatcaaaataaaaactttacagggggaaaaccggaaatgacctatattacagggggtaaagacctattaa 49873003  T
Q  99 c 99  Q
    |    
T  49873004 c 49873004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 22949349 - 22949246
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacggggaaa--ccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||| ||  ||||||  ||| ||||| ||||||||| |||||||||| ||||||||    
T  22949349 atcaaaacaaaaatattttacaggggggtgaatcaaaataaaaattttccagagggaaaaaccggaaatgacctatattacagggggtaaagacctatta 22949250  T
Q  98 actc 101  Q
    ||||    
T  22949249 actc 22949246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27760391 - 27760291
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||| |||||  ||||| ||||||||| |||||||||| || ||||||    
T  27760391 atcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttacaaggggaaaaccagaaatgacctatattacagggggtaaagacttattaa 27760292  T
Q  99 c 99  Q
    |    
T  27760291 c 27760291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 30586266 - 30586164
Alignment:
Q  1 atcaaaacaaaaatattttacagg-gggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattata-gggggtaaaaacctatt 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||  | |||||| ||||| ||||||||| | ||||||||| |||||||    
T  30586266 atcaaaacaaaaatattttacaggagggtgaatcaaaataaaatttttacaggggtgaaaaccggaaatgacctatattacaggggggtaaagacctatt 30586167  T
Q  97 aac 99  Q
    |||    
T  30586166 aac 30586164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 36867815 - 36867912
Alignment:
Q  5 aaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||| |||   |||||| ||||| |||||||||||||||||||| | ||||||||    
T  36867815 aaacaaaaatattttacaagggggtgaatcaaaataaaaattttacaggggagaaaaccggaaatgacctatattatagggggtaaagatctattaac 36867912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 12767122 - 12767219
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||| |  ||||| ||||||||| | |||||||| ||||||||    
T  12767122 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaggggaaaaatcagaaatgacctatattacaaggggtaaagacctatta 12767219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19623965 - 19624065
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttac--acggggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||  |  || |||||||||||| ||||||||| || || |||| |||||||||    
T  19623965 atcaaaacaaaaatattttacagagggtgaatcaaaataaaaattttacagagaggaaaaccgaaaatgacctatattacagaggataaagacctattaa 19624064  T
Q  99 c 99  Q
    |    
T  19624065 c 19624065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22949437 - 22949520
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattataggg 82  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  |||||  ||||| ||||||||| ||||    
T  22949437 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaggggggaaaaccagaaatgacctatattacaggg 22949520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7584349 - 7584253
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||| | ||| |||||  ||||||| ||||||| | |||||||| ||||||||||    
T  7584349 atcaaaacaaaaatattttacaggg--tgaatcaaaataaaaattttataggggaaaaccagaaatggcatatattacaaggggtaaagacctattaac 7584253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 29313888 - 29313790
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||| ||||||||||  | ||||||||||||||||||||| |||   |||||||||||| ||||||||| ||| |||||| |||||||||    
T  29313888 atcaaaacaaaaatgttttacaggg--taaatcaaaataaaatttttacaggggagaaaaccgaaaatgacctatattacaggaggtaaagacctattaa 29313791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 46902058 - 46902124
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaat 66  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||||    
T  46902058 atcaaaacaaaaatattttatatggggtgaatcaaaataaaaattttacacggggaaaaccgaaaat 46902124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 21549848 - 21549763
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||| |||||||||||||||||||| |||||||| |||  ||||||| ||| ||||| |||||||||||||||| || |||||||    
T  21549848 caaaaaaaaaatattttacagggggtaaatcaaaaaaaatattttacaggggaaaaccaaaaatggcctatattacagagggtaaa 21549763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25110017 - 25110116
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||  ||| ||||||||||||||| ||||||| || |  |||||||||||| ||||||||| |||| ||||| |||||||||    
T  25110017 atcaaaacaaaaatattttactcggg-tgaatcaaaataaaaattttacagggaggaaaaccgaaaatgacctatattacagggtgtaaagacctattaa 25110115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 27432774 - 27432877
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacggggaaa---ccgaaaatggcctatattataggg-ggtaaaaacctat 95  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||   |  |||||| ||||||||| |||| |||||| ||||||    
T  27432774 atcaaaacaaaaatattttacaagggggtgaatcaaaataaaaattttacagggggaaaaatcaaaaaatgacctatattacagggaggtaaagacctat 27432873  T
Q  96 taac 99  Q
    ||||    
T  27432874 taac 27432877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 30586352 - 30586459
Alignment:
Q  1 atcaaaacaaaaatattttacaggg-ggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatatta-tagggggtaaaaacctatt 96  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||  | |||||  ||||| ||||||||| | ||||||||| |||||||    
T  30586352 atcaaaacaaaaatattttacagggaggtgaatcaaaataaaaattttacaggggtgaaaaccagaaatgacctatattactggggggtaaagacctatt 30586451  T
Q  97 aactcaaa 104  Q
    ||| ||||    
T  30586452 aacccaaa 30586459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 36867735 - 36867689
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  36867735 aaaacaaaaatattttacagggggtgaatcaaaataaattttttaca 36867689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 30271646 - 30271546
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| || || |  ||||  |||||| ||||||||| || ||||||| | |||||||    
T  30271646 atcaaaacaaaaatattttacaggaggtgaatcaaaataaaaattttgcagggagaaaaactaaaaatgacctatattacagagggtaaagaactattaa 30271547  T
Q  99 c 99  Q
    |    
T  30271546 c 30271546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30271733 - 30271832
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||  | ||||  |||||| | ||||||| ||| |||||| |||||||||    
T  30271733 atcaaaacaaaaatattttaca-ggggtgaatcaaaataaaaattttacaggggtgaaaacaaaaaatgacatatattacaggaggtaaagacctattaa 30271831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 49872818 - 49872715
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattata--gggggtaaaaacctat 95  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||  | |||||  ||||| ||||||||| |  ||||||||| ||||||    
T  49872818 atcaaaacaaaaatattttacaggggggtgaatcaaaataaaacttttacaggggtgaaaaccagaaatgacctatattacagggggggtaaagacctat 49872719  T
Q  96 taac 99  Q
    ||||    
T  49872718 taac 49872715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 12767030 - 12766939
Alignment:
Q  10 aaaatattttacagggggtgaatcaaaataaaatttttacacggggaaa-ccgaaaatggcctatattatagggggtaaaaacctattaactc 101  Q
    ||||||||||||||||| ||||||||||||||| ||||||| | | ||| |||||||||  |||||||| | |||||||| ||||||||||||    
T  12767030 aaaatattttacagggg-tgaatcaaaataaaaattttacaggagaaaaaccgaaaatgatctatattacaaggggtaaagacctattaactc 12766939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27760476 - 27760554
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatatta 77  Q
    |||||||||||||||||||||| || || ||||||||||||| ||||||| | ||  |||||||||||| |||||||||    
T  27760476 atcaaaacaaaaatattttacaaggagtaaatcaaaataaaaattttacaggaggaaaaaccgaaaatgacctatatta 27760554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3548224 - 3548174
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  3548224 atcaaaacaaaaatattttacgggggggtgaatcaaaataaaatttttaca 3548174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 8355521 - 8355627
Alignment:
Q  1 atcaaaacaaaaatattttac-agggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattata-gggggtaaaaacctatta 97  Q
    ||||||||||||||||||||| ||||||| |||||||| |||  ||||||| |||| |||||  ||||| ||||||||| | ||||||||| ||||||||    
T  8355521 atcaaaacaaaaatattttacaagggggtaaatcaaaaaaaatattttacagggggaaaaccagaaatgacctatattacaggggggtaaagacctatta 8355620  T
Q  98 actcaaa 104  Q
    || ||||    
T  8355621 acccaaa 8355627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 19623924 - 19623878
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  19623924 aaaacaaaaatattttacatgggttgaatcaaaataaaatttttaca 19623878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29313969 - 29314019
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  29313969 atcaaaacaaaaatattttacagggggttgaatcaaaataaaaattttaca 29314019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 5416163 - 5416064
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttacacg-gggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||| |||||||||||||||||||  |||||| |  |||||||  ||||  ||||||||| | |||||||| |||||||||    
T  5416163 atcaaaacaaaaatattttacagaggggtgaatcaaaataaaaaatttacaggatggaaaccagaaataacctatattaca-ggggtaaagacctattaa 5416065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10979948 - 10979901
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttac 49  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  10979948 atcaaaacaaaaatattttac-gggggtgaatcaaaataaaaattttac 10979901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25109933 - 25109830
Alignment:
Q  1 atcaaaacaaaaatattttacag-ggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||  |||||| ||  |||||  ||||| ||||||||| ||  | |||| ||||||||||    
T  25109933 atcaaaacaaaaatattttacagaggggtgaatcaaaataaaa-atttacagggaaaaaccataaatgacctatattacagaagataaagacctattaac 25109835  T
Q  100 tcaaa 104  Q
     ||||    
T  25109834 ccaaa 25109830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 29853584 - 29853671
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    |||||||||||||||||||||||||| |||||||| |||  |||||||   ||| ||||| |||| | ||||||||| ||||||||||    
T  29853584 caaaacaaaaatattttacagggggtaaatcaaaaaaaatattttacaggagggaaaaccaaaaacgacctatattacagggggtaaa 29853671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 49880709 - 49880792
Alignment:
Q  18 ttacagggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||| |||||||| || | |||||||   |||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  49880709 ttacagggggtaaatcaaaaaaataattttacagggggggaaaccggaaatgacctatattacagggggtaaagacctattaac 49880792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 7118190 - 7118084
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggg-gtaaaaacctatta 97  Q
    ||||||||||||| |  ||||||||||| |||||||| || | ||||||| ||||  |||||| ||||| ||||||||| ||||| ||||| ||||||||    
T  7118190 atcaaaacaaaaaaaaattacagggggtaaatcaaaaaaataattttacaggggggaaaaccggaaatgacctatattacaggggtgtaaagacctatta 7118091  T
Q  98 actcaaa 104  Q
    || ||||    
T  7118090 acccaaa 7118084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 51252238 - 51252340
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattataggggg-taaaaacctatt 96  Q
    |||||||||||||||||||||| |||||| |||||||| |||  ||||||| ||||  |||||  ||||| ||||||||| |||||| |||| |||||||    
T  51252238 atcaaaacaaaaatattttacaggggggtaaatcaaaaaaaatattttacaggggggaaaaccagaaatgacctatattacagggggataaagacctatt 51252337  T
Q  97 aac 99  Q
    |||    
T  51252338 aac 51252340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 53806752 - 53806851
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||  |||||||| |||| |||||||| |||  ||||| | |||| ||| |||||||| ||||||||| | |||||||| ||||||||||    
T  53806752 atcaaaacaaaaaatttttacagagggtaaatcaaaaaaaatattttatagggggaaaatcgaaaatgacctatattacaaggggtaaagacctattaac 53806851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 44172941 - 44173018
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatatta 77  Q
    |||||||||||||  ||||||||||||||||| |||| ||||  |||||| |||| |||||||||||| ||| |||||    
T  44172941 atcaaaacaaaaactttttacagggggtgaataaaaaaaaaaaatttacagggggaaaaccgaaaatgacctttatta 44173018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 44179641 - 44179718
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatatta 77  Q
    |||||||||||||  ||||||||||||||||| |||| ||||  |||||| |||| |||||||||||| ||| |||||    
T  44179641 atcaaaacaaaaactttttacagggggtgaataaaaaaaaaaaatttacagggggaaaaccgaaaatgacctttatta 44179718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 46901974 - 46901925
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||| ||||||  ||||||||||||||| |||||||    
T  46901974 atcaaaacaaaaatatttaacagggtatgaatcaaaataaaaattttaca 46901925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 20737548 - 20737512
Alignment:
Q  63 aaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||| |||||||||||||||||||||||||||||||    
T  20737548 aaatgacctatattatagggggtaaaaacctattaac 20737512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 47115574 - 47115622
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaaacctattaactcaaa 104  Q
    |||||||||||| ||||||||| |||||||||| |||||||||| ||||    
T  47115574 aaaccgaaaatgacctatattacagggggtaaagacctattaacccaaa 47115622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 15289965 - 15290027
Alignment:
Q  22 agggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattataggggg 84  Q
    ||||||| |||||||| |||  ||||||||||| ||||| |||||| ||||||||| ||||||    
T  15289965 agggggtaaatcaaaaaaaatattttacacgggaaaaccaaaaatgacctatattacaggggg 15290027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 16295897 - 16295811
Alignment:
Q  3 caaaacaaaaatattttac-agggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||| ||||||||||||| ||||||| |||||||| |||   |||||| ||| || || |||||| ||||||||| ||||||||||    
T  16295897 caaaaaaaaaatattttacaagggggtaaatcaaaacaaatactttacaggggaaacccaaaaatgacctatattagagggggtaaa 16295811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7118275 - 7118355
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattataggg 82  Q
    ||||||||||||| |  ||||| ||||| |||||||| || | ||||||| ||| |||||||||||| ||||||||| ||||    
T  7118275 atcaaaacaaaaaaaaattacacggggtaaatcaaaaaaataattttaca-gggaaaaccgaaaatgacctatattacaggg 7118355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 9351841 - 9351882
Alignment:
Q  2 tcaaaacaaaaatattttacaggggg-tgaatcaaaataaaa 42  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  9351841 tcaaaaaaaaaatattttacagggggttgaatcaaaataaaa 9351882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 43767762 - 43767721
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    |||||||||||||||||||||||  ||| |||||||||||||    
T  43767762 atcaaaacaaaaatattttacagaaggtaaatcaaaataaaa 43767721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43767847 - 43767896
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||| | | | ||||||||||||||| |||||||    
T  43767847 atcaaaacaaaaatattttatatgagttgaatcaaaataaaaattttaca 43767896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 49880606 - 49880505
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattataggggg-taaaaacctatta 97  Q
    ||||||||||||| |  ||||| ||||||  ||||||| || | ||||||| |||| |||||| ||||| |||||||||||||||| |||| ||||||||    
T  49880606 atcaaaacaaaaaaaaattacaagggggtagatcaaaaaaataattttacaagggggaaaccggaaatgacctatattatagggggataaagacctatta 49880507  T
Q  98 ac 99  Q
    ||    
T  49880506 ac 49880505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3748 - 3632
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||  |||| | ||||| ||||||||| ||||| ||||  |||||||||    
T  3748 atcaaaacaaaaatattttatagggggtgaatcaaaataaaatttttacaggggaaaaactggaaatgacctatattacaggggataaatgcctattaac 3649  T
Q  100 tcaaatttaaatcataa 116  Q
     || |||||||| ||||    
T  3648 ccatatttaaattataa 3632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 13357542 - 13357650
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||  ||||| |||||| |||||||||  || |||||| |||||| ||    
T  13357542 atcaaaacaaaaatattttacagggggatgaattaaaataaaatttttacaggggaaaaaccaaaaatgacctatattactggaggtaaagacctataaa 13357641  T
Q  99 ctcaaattt 107  Q
    |||||||||    
T  13357642 ctcaaattt 13357650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30245937 - 30245849
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg-gggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| | || |||||  ||||| ||||||||||||||||||||    
T  30245937 atcaaaacaaaaatattttatagggggtgaatcaaaataaaaattttacaggaggaaaaccagaaatgacctatattatagggggtaaa 30245849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3593442 - 3593362
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttac-acggggaaaccgaaaatggcctatattatag 80  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| | ||| |||||  ||||| ||||||||||||    
T  3593442 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttacaaagggaaaaccagaaatgacctatattatag 3593362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3593528 - 3593632
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||  ||||  |||||| | ||||||| || ||||||| ||||||||||    
T  3593528 atcaaaacaaaaatatttaacagggggtgaatcaaaataaaaattttacaggggaaaaacaaaaaatgacatatattacagagggtaaagacctattaac 3593627  T
Q  100 tcaaa 104  Q
     ||||    
T  3593628 ccaaa 3593632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 5334745 - 5334645
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggg-ga-aaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||| || ||| | ||||| | ||||||| ||||||||||||||||||||    
T  5334745 atcaaaacaaaaatattttacaaggggtaaatcaaaataaaaattttacaggggagataactggaaatgacttatattacagggggtaaaaacctattaa 5334646  T
Q  99 c 99  Q
    |    
T  5334645 c 5334645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 24062351 - 24062462
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaact 100  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||| ||| ||| |  ||||| ||||||||| | ||| |||| ||||||||||     
T  24062351 atcaaaacaaaaatattttacagtgagtgaatcaaaataaaaattttacaggggaaaatcagaaatgacctatattacatgggataaagacctattaacc 24062450  T
Q  101 c-aaatttaaat 111  Q
    | ||||||||||    
T  24062451 ctaaatttaaat 24062462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31885986 - 31886083
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||| |  ||||| | ||||||| ||||| |||| ||||||||||    
T  31885986 atcaaaacaaaaatattttacagggg-tgaatcaaaataaaaattttacaggggaaaatcagaaatgacatatattacaggggataaagacctattaac 31886083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7054182 - 7054082
Alignment:
Q  1 atcaaaacaaaaatattttacaggg-ggtgaatcaaaataaaatttttaca-cggggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||  ||  |||||  ||||| |||||||||| ||||||||| || ||||||    
T  7054182 atcaaaacaaaaatattttacagggaggtgaatcaaaataaaaattttacagaggaaaaacctgaaatgacctatattatcgggggtaaagacatattaa 7054083  T
Q  99 c 99  Q
    |    
T  7054082 c 7054082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9286304 - 9286256
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttac 49  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9286304 atcaaaacaaaaatattttacagggggtgaatcaaaataaaaattttac 9286256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4840786 - 4840688
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||| | ||  | ||||||||||||  |||||||| | |||||||| |||||||||    
T  4840786 atcaaaacaaaaatattttaca-ggggtgaatcaaaataaaaattttataagggtgaaaaccgaaaatgaactatattaca-ggggtaaagacctattaa 4840689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 14985266 - 14985353
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggg-gaaaccgaaaatggcctatattatagggggtaaaa 89  Q
    ||||||||||| |||||||||||||| |||||||| || | ||||||| ||| |||| |||||||| | ||||||| |||||||||||    
T  14985266 caaaacaaaaacattttacagggggtaaatcaaaaaaataattttacaggggagaaatcgaaaatgacttatattacagggggtaaaa 14985353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 30246019 - 30246066
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaattttta 48  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  30246019 atcaaaactaaaatattttacagggggtgaatcaaaataaaaatttta 30246066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 24062266 - 24062169
Alignment:
Q  4 aaaacaaaaatatttt--acagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    ||||||||||||||||  | || | |||||| ||||||||| || |||| ||| |||||  ||||| |||||||||||||||||||| ||||||||||    
T  24062266 aaaacaaaaatattttttatagagagtgaattaaaataaaaattatacaggggaaaaccagaaatgacctatattatagggggtaaagacctattaac 24062169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9286387 - 9286436
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  9286387 atcaaaacaaaaatattttacttggggtgaatcaaaataaaaattttaca 9286436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 19376149 - 19376234
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaa 88  Q
    |||| |||||||||||||||||||| |||||||| |||  ||||||  |||| ||||  |||||| ||||||||||||||||||||    
T  19376149 aaaaaaaaaatattttacagggggtaaatcaaaaaaaatattttactgggggaaaacaaaaaatgacctatattatagggggtaaa 19376234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 2181415 - 2181329
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaa 89  Q
    |||| ||||| |||||||||||||| |||||||| |||  ||||||| |||| ||||  |||||| ||||||||| |||||||||||    
T  2181415 aaaaaaaaaaaattttacagggggtaaatcaaaaaaaatattttacatggggaaaacaaaaaatgacctatattacagggggtaaaa 2181329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 7576175 - 7576137
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaa 42  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  7576175 aaaacaaaaatattttacaaggggtgaatcaaaataaaa 7576137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 13114443 - 13114393
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaaacctattaactcaaatt 106  Q
    |||||||||||| ||||||||| |||||||||| |||||||||| ||||||    
T  13114443 aaaccgaaaatgacctatattacagggggtaaagacctattaacccaaatt 13114393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1319217 - 1319169
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  1319217 atcaaaacaaaaatattttaca-ggagtgaatcaaaataaattttttaca 1319169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12321136 - 12321185
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca 50  Q
    ||||||||||||||||||||||||  || ||||||||||||| |||||||    
T  12321136 atcaaaacaaaaatattttacaggatgtaaatcaaaataaaaattttaca 12321185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33561827 - 33561770
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaa 58  Q
    |||||||||||||||||||||| ||||| |||||||| |||  ||||||| |||||||    
T  33561827 atcaaaacaaaaatattttacatggggtaaatcaaaaaaaatattttacagggggaaa 33561770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 1309886 - 1309799
Alignment:
Q  3 caaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca--cggggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||| |||||||||||||||||||| |||||||| |||  |||||||   ||| ||||  |||||| ||||||||| ||||||||||    
T  1309886 caaaaaaaaaatattttacagggggtaaatcaaaaaaaatattttacaggagggaaaacaaaaaatgacctatattacagggggtaaa 1309799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5953343 - 5953393
Alignment:
Q  1 atcaaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttaca 50  Q
    ||||||| |||||||||||| | |||||||||||||||||||| |||||||    
T  5953343 atcaaaataaaaatattttataagggggtgaatcaaaataaaaattttaca 5953393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 10366570 - 10366652
Alignment:
Q  9 aaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatatta-tagggggtaaaa 89  Q
    |||||||||||||||||||| |||||||| |||  ||||| | |||| ||||| |||||| |||||||||  |||||||||||    
T  10366570 aaaaatattttacagggggtaaatcaaaaaaaatattttatagggggaaaaccaaaaatgacctatattacaagggggtaaaa 10366652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12321051 - 12321009
Alignment:
Q  1 atcaaaacaaaaatattttacagggg-gtgaatcaaaataaaa 42  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  12321051 atcaaaacaaaaatattttacaggggattgaatcaaaataaaa 12321009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29942401 - 29942498
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatc-aaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||| |||||||||||| | || ||||||| |||||||||   ||||| |||| |||||  ||||| ||||||||| |||||||||| |||||||||    
T  29942401 atcaaaataaaaatattttaaaaggagtgaatcaaaaataaaa---ttacagggggaaaaccagaaatgacctatattacagggggtaaagacctattaa 29942497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 33751799 - 33751734
Alignment:
Q  13 atattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatatt 76  Q
    |||||||||||||||||||| ||||  ||| ||||||| ||||  |||||||||||| ||||||||    
T  33751799 atattttacagggggtgaataaaaaagaaaattttacagggggaaaaaccgaaaatgacctatatt 33751734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 7017168 - 7017083
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca-cggggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    |||| ||||| | |||||||||||| |||||||| |||  |||||||  ||||||||  |||||| ||||||||| ||||||||||    
T  7017168 aaaaaaaaaaaaatttacagggggtaaatcaaaaaaaatattttacaggggggaaacaaaaaatgacctatattacagggggtaaa 7017083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10827177 - 10827233
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaa 58  Q
    ||||||||||||| |||||||| || ||||||||||||||||  |||||| |||||||    
T  10827177 atcaaaacaaaaacattttaca-ggagtgaatcaaaataaaaaatttacaaggggaaa 10827233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 21226914 - 21226998
Alignment:
Q  3 caaaacaaaaatattttaca-gggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattataggggg 84  Q
    ||||| |||||||||||||| |||||| |||||||| |||  ||||||| ||||  ||||| |||||| ||||||||| ||||||    
T  21226914 caaaaaaaaaatattttacaggggggtaaatcaaaaaaaatattttacaggggggaaaaccaaaaatgacctatattacaggggg 21226998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 22573841 - 22573804
Alignment:
Q  62 aaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  22573841 aaaatgacctatattatagggggtaaagacctattaac 22573804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 31116520 - 31116476
Alignment:
Q  60 cgaaaatggcctatattatagggggtaaaaacctattaactcaaa 104  Q
    ||||||||  |||||||| |||||||||| |||||||||||||||    
T  31116520 cgaaaatgatctatattagagggggtaaagacctattaactcaaa 31116476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31851948 - 31852048
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaa-ccgaaaatggcctatattata-gggggtaaaaacctattaa 98  Q
    ||||||||||||| |  ||||||||||  ||  |||| |||  ||||||| ||||||| ||||||||| ||||||||| | ||||||||| |||||||||    
T  31851948 atcaaaacaaaaaaaaattacaggggggtaaataaaaaaaatattttacagggggaaaaccgaaaatgacctatattacaggggggtaaagacctattaa 31852047  T
Q  99 c 99  Q
    |    
T  31852048 c 31852048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33561913 - 33561949
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaa 37  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  33561913 atcaaaacaaaaatattttacagggggtaaataaaaa 33561949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28173 - 28070
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttaca-cggggaaaccga-aaatggcctatattata-gggggtaaaaacctatta 97  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||||| | | ||||| ||||||||| | ||||||||||||||||||    
T  28173 atcaaaacaaaaatattttacagggggtgaatcaaagtaaaaattttacagaggggaaaacaagaaatgacctatattacaggggggtaaaaacctatta 28074  T
Q  98 actc 101  Q
    ||||    
T  28073 actc 28070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 28841 - 28940
Alignment:
Q  4 aaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctattaactc 101  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  |  | |||||||||||  ||||||||| ||  | |||| ||||||||||||    
T  28841 aaaacaaaaatattttacagggggtgaatcaaaataaaaattttacagagaagaaaaccgaaaataacctatattacagaagataaagacctattaactc 28940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 91236 - 91334
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaact 100  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||| ||||| ||| |||||  || |||||| |||||||||||    
T  91236 atcaaaataaaaatattttacagagggtgaatcaaaataaaaattttacagggggaaaccggaaatgacctgtatta-cggaggtaaagacctattaact 91334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7963 - 7861
Alignment:
Q  1 atcaaaacaaaaatatttta---cagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctatt 96  Q
    ||||||||||||||||||||   |||||||||||||||||||||| ||||||| |||| |||||  ||||| | ||||||| |||||||||| |||||||    
T  7963 atcaaaacaaaaatattttattacagggggtgaatcaaaataaaaattttacagggggaaaaccagaaatgacatatattacagggggtaaagacctatt 7864  T
Q  97 aac 99  Q
    |||    
T  7863 aac 7861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8050 - 8150
Alignment:
Q  1 atcaaaacaaaaatattttacagg-gggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    ||||||||||||||||||||||||  ||||||||||||||| | ||||||| |||| |||||  ||||| ||||||||| || ||||||| |||||||||    
T  8050 atcaaaacaaaaatattttacaggatggtgaatcaaaataacaattttacaaggggaaaaccagaaatgacctatattacagtgggtaaagacctattaa 8149  T
Q  99 c 99  Q
    |    
T  8150 c 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1930 - 1829
Alignment:
Q  1 atcaaaacaaaaatattttac-agggggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagggggtaaaaacctatta 97  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||||| ||  | |||| | ||||| ||||||||| |||||||||| ||||||||    
T  1930 atcaaaacaaaaatattttacaagggggtgaatcaaaataaaaactttacaggggagaaaactggaaatgacctatattacagggggtaaagacctatta 1831  T
Q  98 ac 99  Q
    ||    
T  1830 ac 1829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2013 - 2115
Alignment:
Q  1 atcaaaacaaaaatattttacagg-gggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattata-gggggtaaaaacctatt 96  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||| ||  | |||||  ||||| ||||||||| | ||||||||| |||||||    
T  2013 atcaaaacaaaaatattttacaagagggtgaatcaaaataaaatttttacaggggtgaaaaccagaaatgacctatattacaggggggtaaagacctatt 2112  T
Q  97 aac 99  Q
    |||    
T  2113 aac 2115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 38151 - 38053
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaaacctattaa 98  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| || |||| ||| |  ||||| ||||||||| || | ||||| |||||||||    
T  38151 atcaaaacaaaaatattttacacggggtgaatcaaaataaaaattttgcagggggaaaatcagaaatgacctatattacagagagtaaagacctattaa 38053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 26408 - 26310
Alignment:
Q  2 tcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||| |||| ||||||| |||||||| |||  ||||| | ||||  |||||||||||| ||||||||| |||||||||| ||||||||||    
T  26408 tcaaaacaaaaatacttta-agggggtaaatcaaaaaaaatattttataagggggaaaaccgaaaatgacctatattacagggggtaaagacctattaac 26310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26490 - 26588
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaat-ttttacacggggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||| || || | ||| || | ||||| ||||||| ||| |||||||||||| ||||||||| |  ||||||| ||||||||||    
T  26490 atcaaaacaaaaatattttatagaggataaataaataaaaaatattttaca-gggaaaaccgaaaatgacctatattacaaagggtaaacacctattaac 26588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3868 - 3771
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatttttacacg-gggaaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||| |   ||||||  ||||| ||||||||| | |||||||| ||||||||||    
T  3868 atcaaaacaaaaatattttaca-ggggtgaatcaaaataaaaattttacaggacagaaaccagaaatgacctatattaca-ggggtaaagacctattaac 3771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3953 - 3999
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaattttta 48  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  3953 atcaaaacaaaaatattttaca-ggggtgaatcaaaataaaattttta 3999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 2872 - 2771
Alignment:
Q  1 atcaaaacaaaaatattttacaggg-ggtgaatcaaaataaaatttttacacgg--ggaaaccgaaaatggcctatattatagg-gggtaaaaacctatt 96  Q
    ||||||||||||||||||||||||| | ||||||||||| ||| ||||||| ||  | ||||| |||||| ||||||||| ||| | ||||| |||||||    
T  2872 atcaaaacaaaaatattttacagggagctgaatcaaaattaaaattttacagggatgaaaaccaaaaatgacctatattacaggagtgtaaagacctatt 2773  T
Q  97 aa 98  Q
    ||    
T  2772 aa 2771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 4541 - 4475
Alignment:
Q  22 agggggtgaatcaaaataaaatttttacacggggaaaccgaaaatggcctatattatagggggtaaa 88  Q
    ||||||||||||||||||||| ||||||| ||| ||| |  ||||| ||||||||| ||||||||||    
T  4541 agggggtgaatcaaaataaaaattttacaggggaaaatcagaaatgacctatattacagggggtaaa 4475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4617 - 4667
Alignment:
Q  1 atcaaaacaaaaatattttacaggggg-tgaatcaaaataaaatttttaca 50  Q
    |||||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  4617 atcaaaacaaaaatattttatagggggttgaatcaaaataaaaattttaca 4667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 934 - 891
Alignment:
Q  1 atcaaaacaaaaatattttacagggggtgaatcaaaataaaatt 44  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||    
T  934 atcaaaacaaaaatattttacagggggtaaataaaaaaaaaatt 891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 332123 - 332065
Alignment:
Q  44 ttttacacggggaaa-ccgaaaatggcctatattatagggggtaaaaacctattaactc 101  Q
    ||||||| ||||||| ||||||||| ||||||||| |||||||||||  ||||||||||    
T  332123 ttttacagggggaaaaccgaaaatgacctatattacagggggtaaaacactattaactc 332065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 36755 - 36800
Alignment:
Q  56 aaaccgaaaatggcctatattatagggggtaaaaacctattaactc 101  Q
    ||||| |||||| ||||||||||||||||||||  |||||||||||    
T  36755 aaaccaaaaatgacctatattatagggggtaaaggcctattaactc 36800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 29647 - 29728
Alignment:
Q  9 aaaaatattttacagggggtgaatcaaaataaaatttttacacgggg-aaaccgaaaatggcctatattatagggggtaaaa 89  Q
    |||||||  ||||||||||| |||||||| |||  ||||||| |||| ||||  |||||| ||||||||| |||||||||||    
T  29647 aaaaataaattacagggggtaaatcaaaaaaaatattttacagggggaaaacaaaaaatgacctatattacagggggtaaaa 29728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 212587 - 212515
Alignment:
Q  30 aatcaaaataaaat-ttttacacgggg--aaaccgaaaatggcctatattatagggggtaaaaacctattaac 99  Q
    |||| ||||||||| ||||||||||||  ||| |||||||| ||||||||| |||||||||||  ||||||||    
T  212587 aatccaaataaaatattttacacggggtaaaatcgaaaatgacctatattacagggggtaaaacactattaac 212515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University