View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11794_high_19 (Length: 377)
Name: NF11794_high_19
Description: NF11794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11794_high_19 |
 | |
|
| [»] chr3 (31 HSPs) |
| |
|
| [»] chr8 (4 HSPs) |
| |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 310; Significance: 1e-174; HSPs: 31)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 8 - 377
Target Start/End: Complemental strand, 9839017 - 9838648
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
9839017 |
ggacatcaagattattgctatcccatgttatggaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagccca |
9838918 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
||| ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
9838917 |
cgccctcatatcaaaatgttgttgaacttcttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaaca |
9838818 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
||||| || ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838817 |
cctatattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
9838718 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgc |
377 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838717 |
aactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgc |
9838648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 8 - 377
Target Start/End: Complemental strand, 9849895 - 9849526
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
9849895 |
ggacatcaagattattgctatcccatgttatggaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagccca |
9849796 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
||| ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
9849795 |
cgccctcatatcaaaatgttgttgaacttcttcatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaaca |
9849696 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
||||| || ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849695 |
cctatattgttatgggttgtgtctctttgagatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
9849596 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgc |
377 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849595 |
aactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgc |
9849526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 8 - 377
Target Start/End: Original strand, 10433957 - 10434326
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
10433957 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaatcctgagacacacaagccca |
10434056 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10434057 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
10434156 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || |||| || ||||||||| ||| | | |
|
|
| T |
10434157 |
cctatcttattatgagttgtgtttctctgtgatagcaacatgttcattattgtctctttgtcatccttccttccaaccatgaaagattcattgaccacag |
10434256 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgc |
377 |
Q |
| |
|
|||| ||||| ||||| |||||||||| ||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
10434257 |
aacttgaaggatttctatgagaaactctcccacttttggtttgcagaccaagtatatctttattctgtgc |
10434326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 8 - 377
Target Start/End: Original strand, 10375758 - 10376127
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
10375758 |
ggacatcaagattattgctatcccatgttcttgaagtgaccgattcaaggagagacttggttactctcaaaatatcaaaatcctcagacacacaagccca |
10375857 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
||||||||||||||||| |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10375858 |
tgccttcaaatcaaaatgttgttgaactttttcatcattgtaaacaagttgtgcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaaca |
10375957 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
||||| |||||||| | ||||||| ||| ||||||||||||||||||||| || ||||| ||| ||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
10375958 |
cctatattattatgcgatgtgtctgtctctgatagcaacatgttcattatagtgtctttatcatccttcctacccaccatgacagattcatttaccactg |
10376057 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgc |
377 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
10376058 |
aacttgaaggtgttctacgagaaactctaccacttttagtttgcagaccaagtatatctttatactgtgc |
10376127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 12 - 377
Target Start/End: Complemental strand, 11769386 - 11769021
Alignment:
| Q |
12 |
atcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggcc |
111 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||| ||||||||||| ||||||||| |||||||| ||| |
|
|
| T |
11769386 |
atcaagattattgctatcccaagttcttgaagtgaccgattcaaggagagacctggttactctcataatatcaaaatcctcagacacgcaagcccatgcc |
11769287 |
T |
|
| Q |
112 |
ttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacaccta |
211 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
11769286 |
ttcaaatcaaaatattgttgaacttctttatcattgtagacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacaccta |
11769187 |
T |
|
| Q |
212 |
tcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctgaact |
311 |
Q |
| |
|
| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||| ||||||| |
|
|
| T |
11769186 |
tattattatggattgtgtctctctgtgatagcaacatgttcattattgtctctttgtcattcttcctacccactatgacagattcatttaccactgaact |
11769087 |
T |
|
| Q |
312 |
agaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgc |
377 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| |
|
|
| T |
11769086 |
tgaaggtgttctacgagaaactctagcacttttagtttgcaaacctaatatatctttattttgtgc |
11769021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 8 - 342
Target Start/End: Complemental strand, 10663682 - 10663348
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||| |||| |
|
|
| T |
10663682 |
ggacatcaagatctttgctatcccaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaaccca |
10663583 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10663582 |
tgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaaca |
10663483 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||| |
|
|
| T |
10663482 |
cctatattattatgggttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccatgagagattcatttaccactg |
10663383 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcactt |
342 |
Q |
| |
|
|||| ||||| |||| ||||||||||| ||||| |
|
|
| T |
10663382 |
aacttgaaggcagtctatgagaaactctaccactt |
10663348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 8 - 368
Target Start/End: Original strand, 10363711 - 10364071
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
||||||||||||||||||| ||| ||||| |||||||| | ||||||||||||||||| |||||| ||| ||||||||||| |||||| |||||| |||| |
|
|
| T |
10363711 |
ggacatcaagattattgctttccgaagttatggaagtggcagattcaaggagagactttgttactctcataatatcaaaatcctcagagacacaaaccca |
10363810 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10363811 |
tgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
10363910 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
||||| ||||| | ||||| ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
10363911 |
cctatattattgtcggttgtttctctctttgaaagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactg |
10364010 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatcttt |
368 |
Q |
| |
|
|||| |||||||||||||| ||||| || | |||||||||||||||| |||||||||||| |
|
|
| T |
10364011 |
aacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaagtatatcttt |
10364071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 8 - 342
Target Start/End: Complemental strand, 10127084 - 10126750
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||| |||| |
|
|
| T |
10127084 |
ggacatcaagattattgctatcccaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaaccca |
10126985 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
10126984 |
tgccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcccaaacctcccatgcccaaaattgcaacaaca |
10126885 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
||||| |||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
10126884 |
cctatattattatgggatgtgtctctctgagatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactg |
10126785 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcactt |
342 |
Q |
| |
|
|||| ||||| |||| ||||||||||| ||||| |
|
|
| T |
10126784 |
aacttgaaggcagtctatgagaaactctaccactt |
10126750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 8 - 377
Target Start/End: Complemental strand, 10088946 - 10088577
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
||||| |||||| |||||||||| ||||| | |||||||| ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||| |||| |
|
|
| T |
10088946 |
ggacaccaagatcattgctatccgaagttgtcgaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaaccca |
10088847 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10088846 |
tgccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
10088747 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
||||| ||||| | ||||| ||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||| | | |
|
|
| T |
10088746 |
cctatattattgtcggttgtttctctctttgaaagcaacatgttcattattgtctctttatcatccttcctacccaccatgacagattcatttaccaccg |
10088647 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgc |
377 |
Q |
| |
|
|||| ||||| |||||| | ||||| || || |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
10088646 |
aacttgaaggagttctatgtgaaacccttgcgattttagtttgcagaccaagtatatctttattctgtgc |
10088577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 8 - 377
Target Start/End: Complemental strand, 10195829 - 10195460
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
||||| |||||| |||||||||| ||||| | |||||||| ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||| |||| |
|
|
| T |
10195829 |
ggacaccaagatcattgctatccgaagttgtcgaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaaccca |
10195730 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10195729 |
tgccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
10195630 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
||||| ||||| | ||||| ||||||| ||| |||||||||||||||||||||||||| ||| |||| |||||||||| |||||||||||||||| ||| |
|
|
| T |
10195629 |
cctatattattgtcggttgtttctctctttgaaagcaacatgttcattattgtctctttatcatcctttctacccaccatgacagattcatttaccactg |
10195530 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgc |
377 |
Q |
| |
|
|||| ||||| |||||| | ||||| || || |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
10195529 |
aacttgaaggagttctatgtgaaacccttgcgtttttagtttgcagaccaagtatatctttattctgtgc |
10195460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 8 - 342
Target Start/End: Complemental strand, 10032159 - 10031825
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
|||||||||||| ||||||||| ||||| |||||||||| ||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||| |
|
|
| T |
10032159 |
ggacatcaagatctttgctatccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaagccca |
10032060 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10032059 |
ggccttcaaatcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaaca |
10031960 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
||||| |||||||| | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||| ||| |
|
|
| T |
10031959 |
cctatattattatgggatgcgtctctctgtgatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgagagattcatttaccactg |
10031860 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcactt |
342 |
Q |
| |
|
|||| ||||| |||| ||||||||||| ||||| |
|
|
| T |
10031859 |
aacttgaaggcagtctatgagaaactctaccactt |
10031825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 8 - 370
Target Start/End: Complemental strand, 10580757 - 10580395
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
||||||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||| |||| |
|
|
| T |
10580757 |
ggacatcaagattattgctttccgaagttgtggaagtgacagattcaaggagagactttgttactctcataatatcaaaatcctcagacacacaaaccca |
10580658 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10580657 |
cgccttcatgtcaaaatgttgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaaca |
10580558 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| || | | | | |
|
|
| T |
10580557 |
cctatattattatggattgtgtttctctgtgatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcgttaaacacag |
10580458 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttat |
370 |
Q |
| |
|
|||| ||||| |||| | |||||||||||||||| ||||||||||||||||| | |||||||| |
|
|
| T |
10580457 |
aacttgaaggagttccatgagaaactctagcactcttagtttgcaaaccaaggacatctttat |
10580395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 8 - 342
Target Start/End: Complemental strand, 10184398 - 10184064
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||| |||||||||||||| |
|
|
| T |
10184398 |
ggacatcaagattattgctatcccaagttgtggaagtgacagattcaaggagagacttggttactctcataatatcaaaatcctcggacacacaagccca |
10184299 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
||| ||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10184298 |
cgccctcatatcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaaca |
10184199 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
10184198 |
cctatagcattatgggttgtgtctctctgtgacagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactg |
10184099 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcactt |
342 |
Q |
| |
|
|||| ||||| |||| ||||||||||| ||||| |
|
|
| T |
10184098 |
aacttgaaggcagtctatgagaaactctaccactt |
10184064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 13 - 342
Target Start/End: Complemental strand, 10260849 - 10260520
Alignment:
| Q |
13 |
tcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggcct |
112 |
Q |
| |
|
|||||||||||| |||||||| |||| |||||||| |||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||| |||| |
|
|
| T |
10260849 |
tcaagattattgatatcccaatttctagaagtgactgattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagcccacgcct |
10260750 |
T |
|
| Q |
113 |
tcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctat |
212 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10260749 |
tcatgtcaaaatgttgttgaacttctttatcattgtaaacaagttgagcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaacacctat |
10260650 |
T |
|
| Q |
213 |
cttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctgaacta |
312 |
Q |
| |
|
||||| | ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
10260649 |
attattgttggttgtttctctctgtgatagcaacatgttcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactgaactt |
10260550 |
T |
|
| Q |
313 |
gaaggtgttctacgagaaactctagcactt |
342 |
Q |
| |
|
||||| |||| ||||||||||| ||||| |
|
|
| T |
10260549 |
gaaggcagtctatgagaaactctaccactt |
10260520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 377
Target Start/End: Complemental strand, 10077425 - 10077053
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
|||||||||||| |||| ||||||||||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||| |
|
|
| T |
10077425 |
ggacatcaagatcattgttatcccaagttctagaagtgatcgattcaaggagagacttggttactctcataatatcaaaatcctcagacacacaagccca |
10077326 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
|||| |||||||||||||| | |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10077325 |
tgcctgcaaatcaaaatggtatcgaactttataatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaaca |
10077226 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
|||||||||||||| ||| | | || ||||||||||||||||||||||||||||||||||| || | |||| |||| |||||||||||||| ||| |
|
|
| T |
10077225 |
cctatcttattatgggttccgcccatccctgatagcaacatgttcattattgtctctttgtcacgctccataccaaccatctcagattcatttaccactg |
10077126 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaa---actctagcacttttagtttgcaaaccaagtatatctttattctgtgc |
377 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
10077125 |
aacttgaaggtgttctacgagaaattactctagcaattttagtttgcagaccaagtacatctttattctgtgc |
10077053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 12 - 377
Target Start/End: Original strand, 11130943 - 11131308
Alignment:
| Q |
12 |
atcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggcc |
111 |
Q |
| |
|
||||||||||||| | ||||||| || |||||||| ||||||||||||| || |||||| | ||||||||||||| ||| || ||||||||||| || |
|
|
| T |
11130943 |
atcaagattattgttttcccaagcccttgaagtgacagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgct |
11131042 |
T |
|
| Q |
112 |
ttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacaccta |
211 |
Q |
| |
|
|| | |||||| || | |||||||| || |||||||||| ||| ||| |||||||| |||||||| | ||||||||| |||||||||||||||||||| | |
|
|
| T |
11131043 |
ttgagatcaaagtgttcttgaactttttcatcattgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacaccga |
11131142 |
T |
|
| Q |
212 |
tcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctgaact |
311 |
Q |
| |
|
| || |||| | ||| |||| |||||||||||||||| ||||||||||||||||| |||| ||||| |||| || |||||||| ||| | ||||| |
|
|
| T |
11131143 |
tattgttattgctagtgctgctctttgatagcaacatgttcgttattgtctctttgtcatcctttctaccaaccatgaatgattcattaaccacagaact |
11131242 |
T |
|
| Q |
312 |
agaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgc |
377 |
Q |
| |
|
||||||||||||| | ||| |||||||||||||||||| |||||||| |||||||| || ||||| |
|
|
| T |
11131243 |
agaaggtgttctatggaaaattctagcacttttagtttgtaaaccaaggatatctttgttttgtgc |
11131308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 12 - 377
Target Start/End: Original strand, 11148771 - 11149136
Alignment:
| Q |
12 |
atcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggcc |
111 |
Q |
| |
|
||||||||||||| | ||||||| || |||||||| ||||||||||||| || |||||| | ||||||||||||| ||| || ||||||||||| || |
|
|
| T |
11148771 |
atcaagattattgttttcccaagcccttgaagtgacagattcaaggagagttttagttactcttaaaatatcaaaatcctccgatacacaagcccatgct |
11148870 |
T |
|
| Q |
112 |
ttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacaccta |
211 |
Q |
| |
|
|| | |||||| || | |||||||| || |||||||||| ||| ||| |||||||| |||||||| | ||||||||| |||||||||||||||||||| | |
|
|
| T |
11148871 |
ttgagatcaaagtgttcttgaactttttcatcattgtaagcaatttgtgcaagggttgtttttccgacacctcccatacctaaaattgcaacaacaccga |
11148970 |
T |
|
| Q |
212 |
tcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctgaact |
311 |
Q |
| |
|
| || |||| | ||| |||| |||||||||||||||| ||||| ||||||||||| |||| ||||| |||| || |||||||| ||| | ||||| |
|
|
| T |
11148971 |
tattgttattgctagtgctgctctttgatagcaacatgttcgttattatctctttgtcatcctttctaccaaccatgaatgattcattaaccacagaact |
11149070 |
T |
|
| Q |
312 |
agaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattctgtgc |
377 |
Q |
| |
|
||||||||||||| | ||| ||||||||||||||||||||||||||| |||||||| || ||||| |
|
|
| T |
11149071 |
agaaggtgttctatggaaaattctagcacttttagtttgcaaaccaaggatatctttgttttgtgc |
11149136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 16 - 370
Target Start/End: Complemental strand, 10889454 - 10889100
Alignment:
| Q |
16 |
agattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggccttca |
115 |
Q |
| |
|
||||||||| | ||||||| ||| ||||| || |||||||| |||| || ||||| | ||||||||||||| |||||| ||||||||||| || || | |
|
|
| T |
10889454 |
agattattgttttcccaagctcttgaagtcacagattcaagaagagttttagttacagttaaaatatcaaaatcctcagatacacaagcccatgctttga |
10889355 |
T |
|
| Q |
116 |
aatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatctt |
215 |
Q |
| |
|
|||||| || | |||||||| || |||||||||||||||||| ||||| || ||||| || | ||||||||| |||||||||||||||||||| || || |
|
|
| T |
10889354 |
gatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacaccgatatt |
10889255 |
T |
|
| Q |
216 |
attatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctgaactagaa |
315 |
Q |
| |
|
|||| | ||| |||| |||||||||||||||||||||||||||||| ||| | || ||||| |||| |||||||||||| || ||||||| ||| |
|
|
| T |
10889254 |
gttattcctagtgctgctctctgatagcaacatgttcattattgtctctttatcatcatttctaccaaccatgacagattcattaactactgaacttgaa |
10889155 |
T |
|
| Q |
316 |
ggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttat |
370 |
Q |
| |
|
|| ||||||||||||||| || || ||||||||||||||||||| |||||||||| |
|
|
| T |
10889154 |
ggggttctacgagaaactttaccaattttagtttgcaaaccaaggatatctttat |
10889100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 12 - 370
Target Start/End: Complemental strand, 8861438 - 8861080
Alignment:
| Q |
12 |
atcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggcc |
111 |
Q |
| |
|
||||||||||||| | ||||||| ||| |||||||| |||||||| |||| || ||||| | |||||||||||| ||| || ||||||||||| || |
|
|
| T |
8861438 |
atcaagattattgttttcccaagctcttgaagtgacagattcaagaagagttttagttacagttgaaatatcaaaatcctctgatacacaagcccatgct |
8861339 |
T |
|
| Q |
112 |
ttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacaccta |
211 |
Q |
| |
|
|| | |||||| || | |||||||| || |||||||||||||||||| ||||| || ||||| || | ||||||||| |||||||||||||||||||| | |
|
|
| T |
8861338 |
ttgagatcaaagtgctcttgaactttttcatcattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacaccga |
8861239 |
T |
|
| Q |
212 |
tcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctgaact |
311 |
Q |
| |
|
| || |||| | ||| |||| |||||||||||||||||||| ||||||||| ||| | || ||||| |||| |||||||||||| || ||||||| |
|
|
| T |
8861238 |
tattgttattcctagtgctgctctctgatagcaacatgttcattactgtctctttatcatcatttctaccaaccatgacagattcattaactactgaact |
8861139 |
T |
|
| Q |
312 |
agaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttat |
370 |
Q |
| |
|
||||| ||||||||||||||| || || ||||||||||||||||||| |||||||||| |
|
|
| T |
8861138 |
tgaaggggttctacgagaaactttaccaattttagtttgcaaaccaaggatatctttat |
8861080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 12 - 370
Target Start/End: Original strand, 11159934 - 11160292
Alignment:
| Q |
12 |
atcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggcc |
111 |
Q |
| |
|
||||||||||||| | ||||||| ||| |||||||| |||||||| |||| || ||||| ||||||||||||| |||||| ||||||||||| || |
|
|
| T |
11159934 |
atcaagattattggtttcccaagctcttgaagtgacagattcaagaagagttttagttacagataaaatatcaaaatcctcagatacacaagcccatgct |
11160033 |
T |
|
| Q |
112 |
ttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacaccta |
211 |
Q |
| |
|
|| ||||||||||| | |||||||| || || ||||||||||||||| ||||| || ||||| || | ||||||||| ||||||||||||||||| |||| |
|
|
| T |
11160034 |
ttgaaatcaaaatgatcttgaactttttcattattgtaaacaagttgtgcaagtgtcgttttaccgacacctcccatacctaaaattgcaacaacgccta |
11160133 |
T |
|
| Q |
212 |
tcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctgaact |
311 |
Q |
| |
|
| || |||| ||| |||| |||||||||||||||||||||||||||||| ||| | || ||||| |||| ||||||| |||| || ||||||| |
|
|
| T |
11160134 |
tattgttattgccagtgctactctctgatagcaacatgttcattattgtctctttatcatcatttctaccaaccatgacagatgcattaactactgaact |
11160233 |
T |
|
| Q |
312 |
agaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttat |
370 |
Q |
| |
|
||||| ||||||||||||||| || || ||||| ||||||||||||| |||||||||| |
|
|
| T |
11160234 |
tgaaggggttctacgagaaactttaccaattttactttgcaaaccaaggatatctttat |
11160292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 342
Target Start/End: Complemental strand, 10527452 - 10527157
Alignment:
| Q |
49 |
gattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgt |
148 |
Q |
| |
|
||||||| |||||||||||||||| ||| || ||| |||| ||| || ||| || |||||||||| | |||||||||||||| ||| | || |||||||| |
|
|
| T |
10527452 |
gattcaatgagagacttggttactctcacaacatcgaaatcctctgatacataaacccaggccttgagatcaaaatggtgttcaaccttttcatcattgt |
10527353 |
T |
|
| Q |
149 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattat---gagttgtgtctctctgtgatagcaa |
245 |
Q |
| |
|
|||||||||| |||||||| ||||| || | ||||||||| || || |||||||||||||||| ||||||| | | ||| | | | ||||| ||| |
|
|
| T |
10527352 |
aaacaagttgtgcaagggttgttttaccgacacctcccatacccaagattgcaacaacacctaaattattatttctactggtgccacagtctgataccaa |
10527253 |
T |
|
| Q |
246 |
catgttcattattgtc-tctttgtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactctagcactt |
342 |
Q |
| |
|
||| || || | ||| ||||| ||| | ||||||||||| | |||||||||||||||| ||||||| ||||| ||||||||||||| |||| ||||| |
|
|
| T |
10527252 |
catattgatga--gtcatctttatcatcattcctacccacaatgacagattcatttaccactgaacttgaaggggttctacgagaaaatctatcactt |
10527157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 67 - 366
Target Start/End: Complemental strand, 13333001 - 13332702
Alignment:
| Q |
67 |
gttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaaggg |
166 |
Q |
| |
|
|||||| ||| |||||| |||| ||| || |||||| ||||| | |||| ||||||||||| |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
13333001 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13332902 |
T |
|
| Q |
167 |
tagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctcttt |
266 |
Q |
| |
|
| ||||| || | ||| ||||| || ||||||||||| ||||| | || ||| || ||| | || | |||| |||||| | || | | ||||||| |
|
|
| T |
13332901 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaacactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
13332802 |
T |
|
| Q |
267 |
gtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatct |
366 |
Q |
| |
|
||| |||||||||| |||| ||||||||||||||| |||||| ||||| |||||| |||||||||| || || ||||||||| ||||| |||||| |
|
|
| T |
13332801 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttctaagagaaactctcgcgctcacagtttgcaagccaagaatatct |
13332702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 78 - 335
Target Start/End: Complemental strand, 13344175 - 13343918
Alignment:
| Q |
78 |
aatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcct |
177 |
Q |
| |
|
|||||| |||| ||| || |||||| ||||| | |||| ||||||||||| |||||||||||||||||| |||| |||||||||||| || ||||| || |
|
|
| T |
13344175 |
aatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagagtggttttgcca |
13344076 |
T |
|
| Q |
178 |
aaacctcccatgcctaaaattgcaacaacacctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcc |
277 |
Q |
| |
|
| ||| ||||| || ||||||||||| ||||| || || ||| || ||| | || | |||| |||||| | || | | ||||||| ||| |||||| |
|
|
| T |
13344075 |
acaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctctttatcatccttcc |
13343976 |
T |
|
| Q |
278 |
tacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactct |
335 |
Q |
| |
|
|||| |||| ||||||||||||||| |||||| ||||||||||| |||||||||| |
|
|
| T |
13343975 |
taccaaccataacagattcatttaccattgaacttgaaggtgttcttagagaaactct |
13343918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 335
Target Start/End: Complemental strand, 13289762 - 13289494
Alignment:
| Q |
67 |
gttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaaggg |
166 |
Q |
| |
|
|||||| |||||||||| |||| ||| || |||||| ||||| | |||| ||||||||||| |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
13289762 |
gttactctcaaaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13289663 |
T |
|
| Q |
167 |
tagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctcttt |
266 |
Q |
| |
|
| ||||| || | ||| ||||| || |||||||| || ||||| || || ||| || ||| | || | |||| |||||| | || | | ||||||| |
|
|
| T |
13289662 |
tggttttgccaacaccgcccatacccaaaattgcgaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
13289563 |
T |
|
| Q |
267 |
gtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactct |
335 |
Q |
| |
|
||| |||||||||| |||| ||||||| ||||||| |||||| ||||| |||||| |||||||||| |
|
|
| T |
13289562 |
atcatccttcctaccaaccataacagatttatttaccattgaacttgaaggcgttctaagagaaactct |
13289494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 335
Target Start/End: Complemental strand, 13171128 - 13170860
Alignment:
| Q |
67 |
gttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaaggg |
166 |
Q |
| |
|
|||||| ||| |||||| |||| ||| || |||||| ||||| | |||| ||||||||||| |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
13171128 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13171029 |
T |
|
| Q |
167 |
tagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctcttt |
266 |
Q |
| |
|
| ||||| || | ||| ||||| || ||||||||||| ||||| || || ||| || ||| | || | |||| |||||| | || | | ||||||| |
|
|
| T |
13171028 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
13170929 |
T |
|
| Q |
267 |
gtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactct |
335 |
Q |
| |
|
||| ||||||| || |||| ||||||||||||||| |||||| ||||| ||||| |||||||||| |
|
|
| T |
13170928 |
atcatccttccttccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaactct |
13170860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 67 - 366
Target Start/End: Complemental strand, 13161077 - 13160778
Alignment:
| Q |
67 |
gttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaaggg |
166 |
Q |
| |
|
|||||| ||| |||||| |||| ||| || |||||| ||||| | |||| ||||||||||| |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
13161077 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
13160978 |
T |
|
| Q |
167 |
tagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctcttt |
266 |
Q |
| |
|
| ||||| || | ||| ||||| || ||||||||||| ||||| || || ||| || ||| | || | |||| |||||| | | | | |||| || |
|
|
| T |
13160977 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaacgagtctctcctt |
13160878 |
T |
|
| Q |
267 |
gtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatct |
366 |
Q |
| |
|
||| |||||||||| |||| ||||||||||||||| |||||| ||||| ||||| |||||||||| || || ||||||||| ||||| |||||| |
|
|
| T |
13160877 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaactctcgcgctcacagtttgcaagccaaggatatct |
13160778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 10500443 - 10500375
Alignment:
| Q |
274 |
ttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactctagcactt |
342 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
10500443 |
ttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgagaaactctaccactt |
10500375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 10517579 - 10517408
Alignment:
| Q |
49 |
gattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgt |
148 |
Q |
| |
|
|||||||||| |||||||||| || | | || |||||||| |||||| |||||| ||||||| || ||||||||||| |||| ||||| | |||||||| |
|
|
| T |
10517579 |
gattcaaggatagacttggttgctctaataacatcaaaatcctcagatacacaaacccaggctttgaaatcaaaatgttgttcaacttttgcatcattgt |
10517480 |
T |
|
| Q |
149 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattat |
220 |
Q |
| |
|
|||||| || |||||||| ||||| || | |||||||| || | ||||||| ||||||||| ||||||| |
|
|
| T |
10517479 |
aaacaaactgtgcaagggtcgttttaccgacgcctcccatacccacaattgcagcaacacctaaattattat |
10517408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 11781957 - 11782128
Alignment:
| Q |
49 |
gattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgt |
148 |
Q |
| |
|
|||||||||||||||||||||| | | | || ||| |||| ||| || |||||| ||||| | || ||||||||||| |||| ||||| |||||||| |
|
|
| T |
11781957 |
gattcaaggagagacttggttattctaacaacatcgaaatcctccgatacacaaacccagactttgaaatcaaaatgttgttcaactttcacatcattgt |
11782056 |
T |
|
| Q |
149 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattat |
220 |
Q |
| |
|
||||||| || |||||||| ||||| || | |||||||| || |||||||| |||||||||| ||||||| |
|
|
| T |
11782057 |
aaacaagctgtgcaagggtcgttttaccgacgcctcccatacccaaaattgcgacaacacctaaattattat |
11782128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 10500671 - 10500500
Alignment:
| Q |
49 |
gattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgt |
148 |
Q |
| |
|
|||||||||||||| ||||||| | ||| || ||| |||| ||| | |||||| ||| ||||||| ||||||||| | || || || | || |||| |
|
|
| T |
10500671 |
gattcaaggagagatttggttattctcacaacatcgaaatcctccggtacacaaatccatgccttcagatcaaaatgttcttcaattttatcgtcgttgt |
10500572 |
T |
|
| Q |
149 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattat |
220 |
Q |
| |
|
|||||||||| ||||| || ||||| || | |||||||| || ||||||||||||||||||| ||||||| |
|
|
| T |
10500571 |
aaacaagttgagcaagtgttgttttaccgacgcctcccatacccaaaattgcaacaacacctaaattattat |
10500500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 11782173 - 11782245
Alignment:
| Q |
262 |
tctttgtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactc |
334 |
Q |
| |
|
||||| ||| | ||||||||||||||| |||||| ||||| | ||||||| ||||| |||||| |||||||| |
|
|
| T |
11782173 |
tctttatcatcattcctacccaccacgtcagattgatttagcactgaacttgaaggggttctagaagaaactc |
11782245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 8 - 370
Target Start/End: Complemental strand, 26907053 - 26906691
Alignment:
| Q |
8 |
ggacatcaagattattgctatcccaagttctggaagtgaccgattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagccca |
107 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| ||||||||||||| |||| |
|
|
| T |
26907053 |
ggacatcaagattattggtatcccaagttctggaagtgaccgattcaaggagagatttggttactctcataatatcaaaatcctcagacacacaaaccca |
26906954 |
T |
|
| Q |
108 |
ggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26906953 |
tgccttcaaatcaaaatgccgttgaacttctttatcattgtaaagaagttgggcaagggtagtttttcctaaacctcccatgcccaaaattgcaacaaca |
26906854 |
T |
|
| Q |
208 |
cctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctg |
307 |
Q |
| |
|
||||| |||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
26906853 |
cctatattattatgggttgtgtctctctctgatagcaacatattcattattgtctctttgtcatccttcctacccaccatgacagattcatttaccactg |
26906754 |
T |
|
| Q |
308 |
aactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttat |
370 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
26906753 |
aacttgaaggtgttctacgagaaactctagcacttttagtttgcaaaccaaggatatctttat |
26906691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 274 - 377
Target Start/End: Original strand, 44957888 - 44957991
Alignment:
| Q |
274 |
ttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatctttattct |
373 |
Q |
| |
|
||||| ||||||| | ||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| || |
|
|
| T |
44957888 |
ttcctgcccaccataatagattcattaacccctgaacttgaaggtgttctatgagaaactctagcacttttagtttccaaaccaattatatctttatgct |
44957987 |
T |
|
| Q |
374 |
gtgc |
377 |
Q |
| |
|
|||| |
|
|
| T |
44957988 |
gtgc |
44957991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 11485132 - 11484961
Alignment:
| Q |
49 |
gattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgt |
148 |
Q |
| |
|
||||||||||| |||||||||| ||| | ||| |||| ||| || |||||| |||| || || | ||||||||| |||| ||||| || ||| |||| |
|
|
| T |
11485132 |
gattcaaggagggacttggttatcctcacgacatcgaaatcctccgatacacaaacccatgctttgagatcaaaatgctgttcaactttttcatcgttgt |
11485033 |
T |
|
| Q |
149 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattat |
220 |
Q |
| |
|
|||||||||| |||||||| ||||| || | |||||||| | ||||||||||||||||||| ||||||| |
|
|
| T |
11485032 |
aaacaagttgtgcaagggtcgttttaccgacgcctcccataaccaaaattgcaacaacacctaaattattat |
11484961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 11484904 - 11484842
Alignment:
| Q |
274 |
ttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactcta |
336 |
Q |
| |
|
||||| ||||||| ||||||||||| ||| ||||||| || ||||||||||||||||||||| |
|
|
| T |
11484904 |
ttccttcccaccataacagattcattcaccactgaacttgatggtgttctacgagaaactcta |
11484842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 44957735 - 44957834
Alignment:
| Q |
121 |
aaatggtgttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattat |
220 |
Q |
| |
|
||||| |||| ||||| | ||||||||||||||||||| || || || ||||| || | ||||||||| ||||| | ||||||||||||| ||||||| |
|
|
| T |
44957735 |
aaatgttgttcaacttttatatcattgtaaacaagttgtgcgagagtcgttttaccgacacctcccatacctaaggtggcaacaacacctaaattattat |
44957834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 211
Target Start/End: Original strand, 17852898 - 17853060
Alignment:
| Q |
49 |
gattcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgt |
148 |
Q |
| |
|
|||||||||||||||||||||||| ||| || |||||||| || || |||||| ||||||| || | ||||||||| |||| ||| | || |||||||| |
|
|
| T |
17852898 |
gattcaaggagagacttggttactctcacaacatcaaaatcttctgatacacaaacccaggctttgagatcaaaatgatgttcaaccttttcatcattgt |
17852997 |
T |
|
| Q |
149 |
aaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacaccta |
211 |
Q |
| |
|
||||||| || |||||||| ||||| || | ||||||||| || || |||||||||||||||| |
|
|
| T |
17852998 |
aaacaagctgtgcaagggtcgttttaccgacacctcccatccccaatattgcaacaacaccta |
17853060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 17853126 - 17853194
Alignment:
| Q |
274 |
ttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactctagcactt |
342 |
Q |
| |
|
||||| || |||| |||||||||||||||| | ||||| ||||| |||||||||||||||||| ||||| |
|
|
| T |
17853126 |
ttccttcctaccatgacagattcatttaccacggaacttgaaggggttctacgagaaactctaccactt |
17853194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 49985 - 50081
Alignment:
| Q |
272 |
ccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactctagcacttttagtttgcaaaccaagtatatcttt |
368 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| ||||| || | |||||||||||||||| |||||||||||| |
|
|
| T |
49985 |
ccttcctacccaccatgacagattcatttaccactgaacttgaaggtgttctacgtgaaacccttgtgcttttagtttgcaaacgaagtatatcttt |
50081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 335
Target Start/End: Original strand, 145911 - 146179
Alignment:
| Q |
67 |
gttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaaggg |
166 |
Q |
| |
|
|||||| ||| |||||| |||| ||| || |||||| ||||| | |||| ||||||||||| |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
145911 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
146010 |
T |
|
| Q |
167 |
tagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctcttt |
266 |
Q |
| |
|
| ||||| || | ||| ||||| || ||||||||||| ||||| || || ||| || ||| | || | |||| |||||| | || | | ||||||| |
|
|
| T |
146011 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
146110 |
T |
|
| Q |
267 |
gtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactct |
335 |
Q |
| |
|
||| |||||||||| |||| ||||||||||||||| |||||| ||||| ||||| |||||||||| |
|
|
| T |
146111 |
atcatccttcctaccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaactct |
146179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 335
Target Start/End: Original strand, 135860 - 136128
Alignment:
| Q |
67 |
gttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgtaaacaagttgggcaaggg |
166 |
Q |
| |
|
|||||| ||| |||||| |||| ||| || |||||| ||||| | |||| ||||||||||| |||||||||||||||||| |||| |||||||||||| | |
|
|
| T |
135860 |
gttactctcagaatatcgaaatcctccgatacacaaacccagactttcagatcaaaatggtcttgaacttctttatcattataaagaagttgggcaagag |
135959 |
T |
|
| Q |
167 |
tagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattatgagttgtgtctctctgtgatagcaacatgttcattattgtctcttt |
266 |
Q |
| |
|
| ||||| || | ||| ||||| || ||||||||||| ||||| || || ||| || ||| | || | |||| |||||| | || | | ||||||| |
|
|
| T |
135960 |
tggttttgccaacaccgcccatacccaaaattgcaaccacaccaatactactattggtagtgccactgtcagatatcaacatactaatgagtctctcttt |
136059 |
T |
|
| Q |
267 |
gtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactct |
335 |
Q |
| |
|
||| ||||||| || |||| ||||||||||||||| |||||| ||||| ||||| |||||||||| |
|
|
| T |
136060 |
atcatccttccttccaaccataacagattcatttaccattgaacttgaaggcgttcttagagaaactct |
136128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 51 - 220
Target Start/End: Complemental strand, 29836756 - 29836587
Alignment:
| Q |
51 |
ttcaaggagagacttggttactttcaaaatatcaaaattctcagacacacaagcccaggccttcaaatcaaaatggtgttgaacttctttatcattgtaa |
150 |
Q |
| |
|
|||||||||||| ||||||||| |||| |||||||||| |||||||||||| ||||| | | | ||||||||| | || |||||||| | ||||| |
|
|
| T |
29836756 |
ttcaaggagagatttggttactctcaacatatcaaaatcttcagacacacaaacccagacttgtacatcaaaatgatttttaacttcttcctggttgtat |
29836657 |
T |
|
| Q |
151 |
acaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaacacctatcttattat |
220 |
Q |
| |
|
| |||| | || ||||| ||||| || | ||||||||||||| |||||| || |||||||| ||||||| |
|
|
| T |
29836656 |
ataagtcgagcgagggtcgttttaccgatacctcccatgcctgtaattgcgactacacctatattattat |
29836587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 368
Target Start/End: Original strand, 31679875 - 31680006
Alignment:
| Q |
237 |
tgatagcaacatgttcattattgtctctttgtcacccttcctacccaccacgacagattcatttacccctgaactagaaggtgttctacgagaaactcta |
336 |
Q |
| |
|
|||||||||||| || ||| | ||||||| |||| ||||||||| |||| || ||||| || ||| |||||| |||||||||||| || |||| ||| |
|
|
| T |
31679875 |
tgatagcaacatattagttagtttctctttatcactcttcctaccaaccatgaaagattgatctactagtgaacttgaaggtgttctaagaaaaacccta |
31679974 |
T |
|
| Q |
337 |
gcacttttagtttgcaaaccaagtatatcttt |
368 |
Q |
| |
|
||||| ||||||||| ||||| |||||||| |
|
|
| T |
31679975 |
ccacttacagtttgcaacccaaggatatcttt |
31680006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 31679767 - 31679845
Alignment:
| Q |
129 |
ttgaacttctttatcattgtaaacaagttgggcaagggtagtttttcctaaacctcccatgcctaaaattgcaacaaca |
207 |
Q |
| |
|
|||||| |||||||||||||||| |||||| || |||| ||||| || | |||||||||||| ||||||| ||||||| |
|
|
| T |
31679767 |
ttgaacatctttatcattgtaaagaagttgagctagggctgttttaccgacacctcccatgccgaaaattgaaacaaca |
31679845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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