View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11794_high_21 (Length: 374)

Name: NF11794_high_21
Description: NF11794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11794_high_21
NF11794_high_21
[»] chr7 (53 HSPs)
chr7 (1-365)||(282829-283193)
chr7 (277-365)||(327406-327494)
chr7 (196-267)||(47754471-47754543)
chr7 (279-341)||(10691298-10691360)
chr7 (279-341)||(29933190-29933252)
chr7 (277-341)||(7873507-7873571)
chr7 (278-341)||(43078055-43078118)
chr7 (278-341)||(43092032-43092095)
chr7 (282-336)||(9500159-9500213)
chr7 (279-337)||(24679100-24679158)
chr7 (281-337)||(9477446-9477502)
chr7 (277-341)||(46199051-46199115)
chr7 (278-341)||(7873883-7873946)
chr7 (277-336)||(21939331-21939390)
chr7 (275-340)||(1449979-1450044)
chr7 (277-342)||(29933524-29933589)
chr7 (279-340)||(42436829-42436890)
chr7 (208-269)||(43234873-43234934)
chr7 (322-365)||(282518-282561)
chr7 (282-341)||(10691641-10691700)
chr7 (282-340)||(42438029-42438087)
chr7 (276-337)||(30283403-30283464)
chr7 (206-263)||(31902718-31902775)
chr7 (282-326)||(9477136-9477180)
chr7 (280-332)||(28960649-28960700)
chr7 (208-267)||(44537424-44537484)
chr7 (277-340)||(18363293-18363356)
chr7 (277-328)||(26974228-26974279)
chr7 (282-341)||(34116118-34116176)
chr7 (207-278)||(35116729-35116800)
chr7 (277-340)||(40790923-40790985)
chr7 (215-268)||(16878796-16878850)
chr7 (278-340)||(18201353-18201415)
chr7 (278-336)||(28350115-28350173)
chr7 (279-337)||(35793375-35793433)
chr7 (217-266)||(37352374-37352424)
chr7 (278-340)||(40139528-40139590)
chr7 (278-340)||(40139814-40139875)
chr7 (205-267)||(44391393-44391455)
chr7 (278-336)||(46266510-46266568)
chr7 (271-340)||(5096780-5096849)
chr7 (279-340)||(11742910-11742971)
chr7 (271-328)||(23826287-23826344)
chr7 (277-326)||(26787933-26787982)
chr7 (230-267)||(35731392-35731429)
chr7 (279-336)||(36580274-36580331)
chr7 (271-340)||(39753864-39753933)
chr7 (279-340)||(45260217-45260278)
chr7 (277-330)||(45718134-45718187)
chr7 (206-269)||(6771917-6771981)
chr7 (208-267)||(28770560-28770620)
chr7 (301-341)||(43077726-43077766)
chr7 (281-336)||(43091667-43091723)
[»] chr5 (38 HSPs)
chr5 (272-365)||(42585979-42586072)
chr5 (278-362)||(42586318-42586402)
chr5 (277-341)||(6464327-6464391)
chr5 (273-341)||(20126432-20126500)
chr5 (277-341)||(36361031-36361095)
chr5 (277-340)||(38162591-38162654)
chr5 (278-331)||(128253-128306)
chr5 (221-276)||(27016765-27016820)
chr5 (282-341)||(43355721-43355780)
chr5 (282-340)||(38163668-38163726)
chr5 (277-341)||(20126670-20126736)
chr5 (278-336)||(22471953-22472011)
chr5 (277-333)||(2974894-2974950)
chr5 (279-339)||(4146391-4146451)
chr5 (277-337)||(20364680-20364740)
chr5 (292-340)||(26366078-26366125)
chr5 (277-336)||(35166549-35166609)
chr5 (216-274)||(2863896-2863955)
chr5 (277-340)||(15204001-15204064)
chr5 (277-340)||(16039753-16039816)
chr5 (278-341)||(36361413-36361476)
chr5 (273-340)||(41083342-41083409)
chr5 (282-336)||(3333695-3333749)
chr5 (282-340)||(10169018-10169076)
chr5 (200-269)||(14474962-14475032)
chr5 (278-328)||(20512464-20512514)
chr5 (221-266)||(31672507-31672553)
chr5 (278-336)||(36798433-36798491)
chr5 (278-340)||(38973327-38973388)
chr5 (282-327)||(13428143-13428188)
chr5 (271-340)||(27264101-27264170)
chr5 (271-340)||(28394925-28394994)
chr5 (279-340)||(37060150-37060211)
chr5 (279-340)||(38974930-38974990)
chr5 (208-267)||(18229565-18229625)
chr5 (220-264)||(23023717-23023760)
chr5 (281-337)||(34969153-34969209)
chr5 (301-337)||(42169422-42169458)
[»] chr8 (63 HSPs)
chr8 (278-363)||(755902-755987)
chr8 (276-365)||(756085-756174)
chr8 (273-365)||(2802976-2803068)
chr8 (281-365)||(4461676-4461760)
chr8 (273-365)||(11289275-11289366)
chr8 (282-365)||(26889619-26889702)
chr8 (282-365)||(6041425-6041508)
chr8 (282-365)||(6045062-6045145)
chr8 (279-365)||(6041089-6041174)
chr8 (279-365)||(6044721-6044806)
chr8 (277-365)||(2802646-2802734)
chr8 (278-341)||(35795583-35795646)
chr8 (277-341)||(17512095-17512159)
chr8 (273-340)||(8347545-8347612)
chr8 (282-340)||(23936282-23936340)
chr8 (284-341)||(1003463-1003520)
chr8 (292-341)||(45163712-45163761)
chr8 (279-340)||(45308454-45308515)
chr8 (273-341)||(14170416-14170484)
chr8 (273-341)||(23475618-23475686)
chr8 (205-268)||(25280007-25280070)
chr8 (277-327)||(26889291-26889341)
chr8 (277-341)||(1003797-1003860)
chr8 (277-337)||(8951038-8951098)
chr8 (277-365)||(14507930-14508018)
chr8 (277-337)||(45522447-45522507)
chr8 (278-337)||(8409821-8409879)
chr8 (221-264)||(18049531-18049574)
chr8 (323-365)||(11288996-11289038)
chr8 (278-340)||(12278834-12278896)
chr8 (279-340)||(20788034-20788095)
chr8 (277-326)||(41602878-41602927)
chr8 (292-328)||(18650944-18650980)
chr8 (277-337)||(29196618-29196678)
chr8 (269-337)||(29340758-29340826)
chr8 (276-340)||(31947851-31947915)
chr8 (280-336)||(33298590-33298646)
chr8 (281-341)||(35795219-35795279)
chr8 (281-336)||(12280358-12280413)
chr8 (273-336)||(17070901-17070964)
chr8 (273-336)||(17577308-17577371)
chr8 (281-328)||(18092913-18092960)
chr8 (282-341)||(27225784-27225842)
chr8 (205-267)||(31265076-31265139)
chr8 (280-326)||(5916348-5916394)
chr8 (282-340)||(5916909-5916967)
chr8 (277-327)||(9498907-9498957)
chr8 (274-336)||(16982621-16982683)
chr8 (205-267)||(20169683-20169745)
chr8 (209-263)||(27633584-27633638)
chr8 (230-268)||(37427296-37427334)
chr8 (278-340)||(45309574-45309636)
chr8 (271-340)||(1657637-1657706)
chr8 (271-340)||(6335580-6335649)
chr8 (196-241)||(13520908-13520953)
chr8 (196-241)||(13610443-13610488)
chr8 (271-340)||(14032028-14032097)
chr8 (275-336)||(23702119-23702180)
chr8 (152-235)||(30381581-30381668)
chr8 (208-264)||(3146123-3146178)
chr8 (276-340)||(10285100-10285163)
chr8 (230-269)||(11995214-11995254)
chr8 (200-267)||(41385339-41385407)
[»] chr4 (57 HSPs)
chr4 (277-365)||(41148163-41148251)
chr4 (278-360)||(41148533-41148615)
chr4 (277-365)||(53578883-53578971)
chr4 (279-341)||(53831152-53831214)
chr4 (279-340)||(30064002-30064063)
chr4 (277-341)||(35830297-35830361)
chr4 (280-340)||(8143034-8143094)
chr4 (277-341)||(47742229-47742293)
chr4 (282-341)||(5548005-5548064)
chr4 (279-340)||(33168125-33168186)
chr4 (277-341)||(13388159-13388222)
chr4 (277-340)||(31760764-31760827)
chr4 (279-345)||(5547613-5547679)
chr4 (277-327)||(21552923-21552973)
chr4 (275-341)||(30064352-30064418)
chr4 (209-269)||(1696150-1696211)
chr4 (200-268)||(52373009-52373076)
chr4 (301-340)||(1140618-1140657)
chr4 (278-337)||(3369846-3369905)
chr4 (278-340)||(14816860-14816923)
chr4 (282-341)||(47742596-47742655)
chr4 (220-270)||(12103802-12103852)
chr4 (278-340)||(26858343-26858405)
chr4 (278-332)||(29697782-29697836)
chr4 (282-336)||(37831595-37831649)
chr4 (282-340)||(44271429-44271487)
chr4 (278-336)||(49804353-49804410)
chr4 (277-335)||(53578603-53578661)
chr4 (275-340)||(10308616-10308681)
chr4 (279-336)||(19536945-19537002)
chr4 (230-270)||(32692913-32692954)
chr4 (280-340)||(1139157-1139217)
chr4 (274-334)||(2653948-2654008)
chr4 (292-340)||(6033865-6033913)
chr4 (206-269)||(7388855-7388919)
chr4 (280-340)||(8671999-8672059)
chr4 (269-341)||(19938578-19938650)
chr4 (196-240)||(25220025-25220069)
chr4 (277-341)||(29344534-29344597)
chr4 (292-340)||(31761855-31761903)
chr4 (276-328)||(38828505-38828557)
chr4 (276-340)||(39906942-39907006)
chr4 (221-267)||(7628054-7628101)
chr4 (279-345)||(3901695-3901759)
chr4 (278-328)||(6033908-6033958)
chr4 (282-336)||(13825884-13825937)
chr4 (278-336)||(35383764-35383822)
chr4 (270-340)||(39907336-39907406)
chr4 (274-340)||(40489206-40489272)
chr4 (271-340)||(23315630-23315699)
chr4 (280-341)||(33641852-33641913)
chr4 (147-199)||(51436913-51436966)
chr4 (278-327)||(53831326-53831374)
chr4 (280-340)||(29860653-29860713)
chr4 (196-235)||(33456092-33456132)
chr4 (276-340)||(35364447-35364511)
chr4 (230-269)||(51291190-51291230)
[»] chr1 (47 HSPs)
chr1 (281-365)||(12074958-12075042)
chr1 (278-363)||(12075244-12075328)
chr1 (270-344)||(3815045-3815119)
chr1 (283-360)||(23953083-23953160)
chr1 (279-365)||(2350064-2350150)
chr1 (280-337)||(37008218-37008275)
chr1 (279-341)||(46895437-46895499)
chr1 (275-340)||(51549393-51549458)
chr1 (276-340)||(3814757-3814821)
chr1 (281-341)||(40876997-40877057)
chr1 (277-341)||(41915774-41915838)
chr1 (282-341)||(43117258-43117317)
chr1 (278-341)||(46895792-46895855)
chr1 (279-340)||(7058376-7058437)
chr1 (273-337)||(367175-367239)
chr1 (278-340)||(11932919-11932981)
chr1 (197-267)||(18114398-18114468)
chr1 (196-248)||(3507051-3507103)
chr1 (276-340)||(21258916-21258980)
chr1 (281-341)||(45719701-45719760)
chr1 (278-345)||(366885-366952)
chr1 (208-267)||(2864225-2864284)
chr1 (274-341)||(7196963-7197030)
chr1 (277-340)||(50503699-50503762)
chr1 (277-340)||(51462179-51462241)
chr1 (278-336)||(3612445-3612503)
chr1 (279-341)||(7196676-7196738)
chr1 (269-327)||(44743735-44743793)
chr1 (278-340)||(49696918-49696980)
chr1 (269-326)||(25486479-25486536)
chr1 (205-268)||(14758638-14758702)
chr1 (277-341)||(15788408-15788472)
chr1 (312-368)||(23952730-23952786)
chr1 (278-342)||(39642199-39642263)
chr1 (292-340)||(50504803-50504851)
chr1 (273-336)||(4476198-4476261)
chr1 (277-340)||(13344428-13344491)
chr1 (273-328)||(40345595-40345650)
chr1 (279-341)||(40876700-40876762)
chr1 (282-340)||(41611244-41611302)
chr1 (209-266)||(45640630-45640688)
chr1 (290-340)||(50877809-50877859)
chr1 (231-267)||(2568958-2568995)
chr1 (147-184)||(3506979-3507016)
chr1 (277-341)||(6129618-6129683)
chr1 (230-267)||(34046461-34046497)
chr1 (215-271)||(40377131-40377187)
[»] chr2 (60 HSPs)
chr2 (278-363)||(8030125-8030210)
chr2 (279-363)||(4856709-4856792)
chr2 (273-341)||(14816049-14816117)
chr2 (279-341)||(14815698-14815760)
chr2 (278-341)||(12802456-12802519)
chr2 (276-341)||(39672673-39672737)
chr2 (278-340)||(14983953-14984015)
chr2 (279-340)||(11363882-11363943)
chr2 (280-341)||(17850486-17850547)
chr2 (276-340)||(52292-52356)
chr2 (277-337)||(35500347-35500407)
chr2 (277-340)||(21631816-21631879)
chr2 (277-340)||(44078542-44078605)
chr2 (278-340)||(28719316-28719378)
chr2 (282-334)||(29370719-29370771)
chr2 (282-341)||(8740440-8740498)
chr2 (278-341)||(9780937-9781000)
chr2 (277-336)||(20650368-20650427)
chr2 (277-340)||(21633320-21633383)
chr2 (273-340)||(23685817-23685883)
chr2 (278-325)||(35500039-35500086)
chr2 (273-340)||(43741754-43741820)
chr2 (196-235)||(44469606-44469645)
chr2 (200-273)||(21004785-21004859)
chr2 (230-276)||(24765439-24765484)
chr2 (278-340)||(36286406-36286468)
chr2 (282-340)||(43890103-43890161)
chr2 (278-340)||(44077070-44077131)
chr2 (279-340)||(10857339-10857400)
chr2 (279-336)||(15023095-15023152)
chr2 (279-340)||(16143668-16143728)
chr2 (283-340)||(23049817-23049874)
chr2 (279-340)||(32661687-32661748)
chr2 (205-267)||(2393004-2393067)
chr2 (229-267)||(3882719-3882758)
chr2 (273-340)||(12542409-12542476)
chr2 (278-337)||(14289265-14289323)
chr2 (277-328)||(14489475-14489526)
chr2 (273-336)||(19206136-19206199)
chr2 (280-335)||(20662516-20662571)
chr2 (277-340)||(23048288-23048351)
chr2 (277-340)||(23280883-23280946)
chr2 (269-340)||(41072080-41072151)
chr2 (278-340)||(2755202-2755264)
chr2 (278-328)||(4423421-4423470)
chr2 (281-319)||(30559242-30559280)
chr2 (278-328)||(36177355-36177405)
chr2 (278-332)||(44617998-44618052)
chr2 (276-341)||(8740151-8740216)
chr2 (282-327)||(31227154-31227199)
chr2 (275-328)||(34600543-34600596)
chr2 (279-336)||(34679347-34679404)
chr2 (279-336)||(36176981-36177038)
chr2 (205-264)||(7271859-7271919)
chr2 (292-340)||(16238125-16238173)
chr2 (280-336)||(19399183-19399239)
chr2 (277-337)||(23993915-23993975)
chr2 (280-340)||(28451640-28451699)
chr2 (229-268)||(35317924-35317964)
chr2 (277-336)||(44297561-44297620)
[»] chr3 (55 HSPs)
chr3 (276-341)||(53255276-53255341)
chr3 (274-340)||(51224921-51224987)
chr3 (268-341)||(53254952-53255025)
chr3 (278-340)||(40988597-40988659)
chr3 (276-337)||(17258186-17258247)
chr3 (277-337)||(3354941-3355001)
chr3 (282-353)||(6128492-6128562)
chr3 (279-337)||(2181315-2181373)
chr3 (270-340)||(17256559-17256629)
chr3 (275-340)||(33944862-33944927)
chr3 (280-341)||(37755189-37755250)
chr3 (292-340)||(32772033-32772081)
chr3 (278-341)||(32831480-32831543)
chr3 (282-340)||(5636660-5636718)
chr3 (280-328)||(32831161-32831209)
chr3 (280-340)||(36315790-36315850)
chr3 (276-336)||(50380152-50380212)
chr3 (281-341)||(51453544-51453603)
chr3 (278-329)||(1807436-1807487)
chr3 (269-340)||(33943524-33943595)
chr3 (277-340)||(49002754-49002817)
chr3 (277-340)||(50381559-50381622)
chr3 (277-340)||(54476041-54476104)
chr3 (282-340)||(10732400-10732458)
chr3 (278-340)||(32770650-32770712)
chr3 (278-336)||(40989655-40989713)
chr3 (282-340)||(51226503-51226561)
chr3 (275-336)||(3193038-3193099)
chr3 (279-340)||(33447224-33447285)
chr3 (279-332)||(35495208-35495261)
chr3 (278-327)||(50420887-50420936)
chr3 (267-340)||(54716759-54716832)
chr3 (292-340)||(55228059-55228107)
chr3 (302-337)||(1807656-1807691)
chr3 (330-365)||(8241230-8241265)
chr3 (277-336)||(42686480-42686539)
chr3 (273-340)||(46934033-46934100)
chr3 (277-340)||(46934240-46934303)
chr3 (278-336)||(20432189-20432247)
chr3 (281-339)||(33445781-33445839)
chr3 (275-320)||(1807079-1807123)
chr3 (279-340)||(5635348-5635409)
chr3 (210-263)||(8957697-8957750)
chr3 (278-335)||(14340732-14340789)
chr3 (271-340)||(43001877-43001946)
chr3 (271-340)||(44177280-44177349)
chr3 (271-340)||(44183964-44184033)
chr3 (267-340)||(44895637-44895710)
chr3 (279-340)||(47922130-47922191)
chr3 (276-336)||(86821-86881)
chr3 (276-336)||(28204477-28204537)
chr3 (300-328)||(35494023-35494051)
chr3 (277-340)||(40410126-40410190)
chr3 (298-334)||(44457445-44457481)
chr3 (292-340)||(55094630-55094678)
[»] chr6 (33 HSPs)
chr6 (292-355)||(2078180-2078242)
chr6 (279-340)||(28574559-28574620)
chr6 (314-364)||(6499786-6499836)
chr6 (273-326)||(9070136-9070189)
chr6 (279-340)||(11623159-11623220)
chr6 (276-340)||(12730588-12730652)
chr6 (278-326)||(12798726-12798774)
chr6 (273-340)||(22515967-22516034)
chr6 (282-340)||(12203895-12203953)
chr6 (279-337)||(30369784-30369841)
chr6 (284-341)||(10582150-10582206)
chr6 (277-337)||(12799048-12799108)
chr6 (281-336)||(2018574-2018629)
chr6 (277-340)||(4793829-4793892)
chr6 (278-340)||(2017171-2017233)
chr6 (282-328)||(7504887-7504933)
chr6 (278-327)||(2173885-2173934)
chr6 (279-340)||(22517486-22517547)
chr6 (279-340)||(24119492-24119553)
chr6 (300-340)||(29873065-29873104)
chr6 (301-340)||(29874456-29874495)
chr6 (277-327)||(238928-238978)
chr6 (278-340)||(4037037-4037099)
chr6 (229-270)||(4806464-4806506)
chr6 (279-337)||(11624304-11624362)
chr6 (278-336)||(12766471-12766529)
chr6 (205-263)||(16442159-16442217)
chr6 (282-340)||(33265089-33265147)
chr6 (279-327)||(2538983-2539031)
chr6 (235-267)||(5446627-5446659)
chr6 (205-264)||(6048237-6048297)
chr6 (223-266)||(7465574-7465618)
chr6 (205-264)||(13070473-13070532)
[»] scaffold0468 (1 HSPs)
scaffold0468 (279-341)||(10351-10413)
[»] scaffold0854 (2 HSPs)
scaffold0854 (280-340)||(3380-3440)
scaffold0854 (280-340)||(1844-1904)
[»] scaffold0017 (1 HSPs)
scaffold0017 (289-361)||(27911-27983)
[»] scaffold0725 (1 HSPs)
scaffold0725 (277-332)||(6692-6747)
[»] scaffold0005 (1 HSPs)
scaffold0005 (278-340)||(22788-22851)
[»] scaffold0016 (1 HSPs)
scaffold0016 (268-326)||(199655-199713)
[»] scaffold0286 (1 HSPs)
scaffold0286 (278-327)||(20107-20156)
[»] scaffold0417 (1 HSPs)
scaffold0417 (276-336)||(9594-9654)
[»] scaffold1458 (1 HSPs)
scaffold1458 (273-336)||(1465-1528)
[»] scaffold0515 (1 HSPs)
scaffold0515 (273-336)||(3633-3696)
[»] scaffold0306 (1 HSPs)
scaffold0306 (273-336)||(3633-3696)
[»] scaffold0182 (1 HSPs)
scaffold0182 (278-341)||(21165-21227)
[»] scaffold1301 (1 HSPs)
scaffold1301 (278-340)||(1300-1362)
[»] scaffold0028 (2 HSPs)
scaffold0028 (278-340)||(32262-32324)
scaffold0028 (279-340)||(31979-32040)
[»] scaffold0019 (1 HSPs)
scaffold0019 (278-340)||(122582-122644)
[»] scaffold0248 (1 HSPs)
scaffold0248 (148-189)||(18411-18452)
[»] scaffold0035 (1 HSPs)
scaffold0035 (271-340)||(81554-81623)
[»] scaffold0001 (1 HSPs)
scaffold0001 (276-336)||(405451-405510)


Alignment Details
Target: chr7 (Bit Score: 336; Significance: 0; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 1 - 365
Target Start/End: Complemental strand, 283193 - 282829
Alignment:
Q  1 catatatttagtctttttcaattcttctctggggactaaaaatatagaattataatctataatctatagggataaaaattggatgcaaagactnnnnnnn 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  283193 catatatttagtctttttcaattcttctctggggactaaaaatatagaattataatctataatctatagggataaaaattggatgcaaagactaaaaaaa 283094  T
Q  101 ttgaagttactgtaatataataggtcttcttgttaacgagtgctccctttaagcattctgattcaaaaaattatccactaaaaagtcaacggtttcaata 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  283093 ttgaagttactgtaatataataggtcttcttgttaacgagtgctccctttaagcattctgattcaaaaaactatccactaaaaagtcaacggtttcaata 282994  T
Q  201 attctcataaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacatttccctaatataaaataggcttaatagcagttttggcct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  282993 attctcataaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacatttccctaatataaaataggcttaatagcagttttggcct 282894  T
Q  301 cctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  282893 cctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 282829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 277 - 365
Target Start/End: Complemental strand, 327494 - 327406
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  327494 taggcttaatagcagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaatgattcgattttggccccctatg 327406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 47754543 - 47754471
Alignment:
Q  196 caataattctcataaaaatttactatttaaatgtcttaaagagtgtccc-ggggcactcgttaacatttccct 267  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  47754543 caataattctcataaaaatttactatttaaaggtcttaaagagtgccccaggggcactcgttaacatttccct 47754471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 10691298 - 10691360
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  10691298 ggcttaattgcaattttggccccctatgtttcaagaagttgcgattttggccccctaactaaa 10691360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 29933190 - 29933252
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||| ||||    
T  29933190 ggcttaatagcagttttgacctcctatgtttcaagaagttgcgattttggccctctaattaaa 29933252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 7873507 - 7873571
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||| ||||||||| || ||||||||||||| |||||||||||||| ||||||||||||    
T  7873507 taggcttaattgcagttttgaccccctatgtttcaaggagttgcgattttggccccctaactaaa 7873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 43078118 - 43078055
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||| ||||    
T  43078118 aggcttaatagcagatttggccccctctgtttcaagaagttgcgattttggccccctaattaaa 43078055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 43092095 - 43092032
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||| ||||||| |||||||||||||||||| | ||||||| ||||||||||||    
T  43092095 aggcttaatagcagatttggccccctatgtttcaagaagttacaattttggccccctaactaaa 43092032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 9500213 - 9500159
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  9500213 ttaatagcagttttagccccctaagtttcaagaagttgcgattttggtcccctaa 9500159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 24679158 - 24679100
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||||||||| ||||||||    
T  24679158 ggcttaataacagttttggccccctatgtttcaagaaattgcgattttggccccctaac 24679100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 9477502 - 9477446
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||| ||||||||    
T  9477502 cttaatagcagttttgacctcctatgttttaaaaagttgcgattttggccccctaac 9477446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 46199051 - 46199115
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||||||||| ||  |||| ||| |||||||||||||||||||||||||| ||||    
T  46199051 taggcttaatagcagttttgcccctctatattttaagaagttgcgattttggtcccctaaataaa 46199115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 7873946 - 7873883
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||| |||||||||||| ||||||||||||||| ||| ||||||||  |||||||||||    
T  7873946 aggcttaattgcagttttggccccctatgtttcaagaaattgtgattttggctccctaactaaa 7873883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 21939390 - 21939331
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||||||||||||| |||| || ||| |||||||||||||||| |||||||    
T  21939390 taggcttaatagcagttttggccccctaagtatcacgaagttgcgattttggccccctaa 21939331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 340
Target Start/End: Original strand, 1449979 - 1450044
Alignment:
Q  275 aataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||| ||| |||||||| ||||| |||||| ||||||| ||||||| |||||||||||    
T  1449979 aataggcttaattgcacttttggccacctatctttcaaaaagttgcaattttggccccctaactaa 1450044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 342
Target Start/End: Complemental strand, 29933589 - 29933524
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaa 342  Q
    ||||||||||| |||||||| ||  |||||||| |||||||||||||||||| | |||||||||||    
T  29933589 taggcttaataacagttttgaccctctatgttttaagaagttgcgattttggcctcctaactaaaa 29933524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 42436829 - 42436890
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||| ||||||||| |||||||| ||||||||| |||||||||||    
T  42436829 ggcttaattgcatttttggccccctatgttttaagaagttacgattttggacccctaactaa 42436890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 43234873 - 43234934
Alignment:
Q  208 taaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacatttccctaa 269  Q
    |||||||||||||||||||   ||||||||||| ||  ||||||||||||||||||||||||    
T  43234873 taaaaatttactatttaaagtgcttaaagagtgcccgagggcactcgttaacatttccctaa 43234934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 322 - 365
Target Start/End: Original strand, 282518 - 282561
Alignment:
Q  322 attttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||    
T  282518 attttggccccctaactaaaataattcgattttggccccatatg 282561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 10691700 - 10691641
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||| ||||||||  || |||||||||||||||||| ||||||||| ||||||||||||    
T  10691700 ttaattgcagtttttaccccctatgtttcaagaagttacgattttggccccctaactaaa 10691641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 42438087 - 42438029
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| ||||||||  |||| |||||||||||||||||||||| |||||||||||    
T  42438087 ttaattgcacttttggccctctatatttcaagaagttgcgattttggccccctaactaa 42438029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 30283403 - 30283464
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    ||||||||||| ||||||||  || | |||||||||||||||||||||||||| ||| ||||    
T  30283403 ataggcttaattgcagtttttaccccttatgtttcaagaagttgcgattttggccccataac 30283464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 31902775 - 31902718
Alignment:
Q  206 cataaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacattt 263  Q
    |||||||||||||||||||||   |||||||||||  | |||||||||||||||||||    
T  31902775 cataaaaatttactatttaaagtccttaaagagtgctcgggggcactcgttaacattt 31902718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 9477136 - 9477180
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgatttt 326  Q
    |||||||||||||||||| ||||||||| || |||||||||||||    
T  9477136 ttaatagcagttttggccccctatgttttaaaaagttgcgatttt 9477180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 28960649 - 28960700
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtccc 332  Q
    |||||||||||||||||||| |||| || ||||||||||| ||||||||||||    
T  28960649 gcttaatagcagttttggcc-cctaagtatcaagaagttgtgattttggtccc 28960700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 44537424 - 44537484
Alignment:
Q  208 taaaaatttactatttaaatgtcttaaagagtgtcccgggg-cactcgttaacatttccct 267  Q
    |||||| ||||||||||||   ||||||||||| ||||||| |||||||||||||||||||    
T  44537424 taaaaacttactatttaaagtgcttaaagagtgccccgggggcactcgttaacatttccct 44537484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 340
Target Start/End: Original strand, 18363293 - 18363356
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| ||| |||||| | |||||||||| | ||||||||||| ||| |||||||||||    
T  18363293 taggcttaattgcacttttggacccctatgtttccaaaagttgcgattatggacccctaactaa 18363356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 26974228 - 26974279
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    |||| ||||| ||| |||||||| ||||| ||||||||||||||||||||||    
T  26974228 taggtttaattgcacttttggccccctatatttcaagaagttgcgattttgg 26974279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 34116176 - 34116118
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||||   ||||||||||    
T  34116176 ttaatagtagttttggcc-cctatgtatcaagaagttgcgattttggcttcctaactaaa 34116118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 35116729 - 35116800
Alignment:
Q  207 ataaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacatttccctaatataaaata 278  Q
    ||||||| |||| |||||||   |||||| ||||||| ||| ||||||||||||||||||| | ||||||||    
T  35116729 ataaaaaattacaatttaaagaccttaaaaagtgtccggggacactcgttaacatttcccttaaataaaata 35116800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 40790985 - 40790923
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| ||| |||||||| ||||| |||| | ||||||||||||||| |||||||||||    
T  40790985 taggcttaattgcacttttggcc-cctatctttccaaaagttgcgattttggccccctaactaa 40790923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 16878796 - 16878850
Alignment:
Q  215 ttactatttaaatgtcttaaagagtg-tcccggggcactcgttaacatttcccta 268  Q
    |||||||||||| || |||||||||| ||  ||||||||||||||||||||||||    
T  16878796 ttactatttaaaggtattaaagagtgctctaggggcactcgttaacatttcccta 16878850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 18201353 - 18201415
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| ||||||||  |||| |||| | ||||||||||||||| |||||||||||    
T  18201353 aggcttaattgcacttttggcccactatctttctaaaagttgcgattttggccccctaactaa 18201415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 28350115 - 28350173
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||||||| ||| ||||  ||||| |||||| ||||||||| |||||||    
T  28350115 aggcttaatagcagttttagccccctaactttcacgaagttacgattttggccccctaa 28350173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 35793375 - 35793433
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    ||||||||||||||||||||| ||||  ||| | |||||||||||||| | ||||||||    
T  35793375 ggcttaatagcagttttggccccctaaattttaggaagttgcgattttaggcccctaac 35793433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 37352424 - 37352374
Alignment:
Q  217 actatttaaatgtcttaaagagtgtc-ccggggcactcgttaacatttccc 266  Q
    |||||||||||||||||||||||| | | ||| ||||||||||||||||||    
T  37352424 actatttaaatgtcttaaagagtgcctcagggacactcgttaacatttccc 37352374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 40139528 - 40139590
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||| | ||||| |||| | ||||||||||||||| |||||||||||    
T  40139528 aggcttaattgcacttttgggcccctatctttctaaaagttgcgattttggccccctaactaa 40139590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 40139875 - 40139814
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||||| ||||| |||| | ||||||||||||||| |||||||||||    
T  40139875 aggcttaattgcacttttggccccctatctttctaaaagttgcgattttgg-cccctaactaa 40139814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 44391455 - 44391393
Alignment:
Q  205 tcataaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacatttccct 267  Q
    ||||| ||| |||| ||||||| |||||||||| | ||| | |||||||||||||||||||||    
T  44391455 tcatacaaagttaccatttaaaggtcttaaagaatatccggaggcactcgttaacatttccct 44391393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 46266568 - 46266510
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||||||| ||  |||| ||||||||||||||| ||||||  |||||||    
T  46266568 aggcttaatagcagttttagctccctaagtttcaagaagttgcaattttgcccccctaa 46266510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Original strand, 5096780 - 5096849
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||| ||| |||||| | ||||| |||| | |||||||| || ||| |||||||||||    
T  5096780 ataaaataggcttaattgcacttttggacccctatctttccaaaagttgcggttatggacccctaactaa 5096849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 11742971 - 11742910
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||| ||||| |||  | |||||||||||||| ||||||||||||    
T  11742971 ggcttaattgcacttttggccccctatcttttcaaaagttgcgattttgatcccctaactaa 11742910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 328
Target Start/End: Complemental strand, 23826344 - 23826287
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    ||||| ||||||||||||||||||| | | ||||  ||||| ||||||||||||||||    
T  23826344 ataaattaggcttaatagcagtttttgtcccctaactttcacgaagttgcgattttgg 23826287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 26787982 - 26787933
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgatttt 326  Q
    |||||||||||| |||||||||| ||||| |||||| |||||| ||||||    
T  26787982 taggcttaatagtagttttggccccctatatttcaaaaagttgtgatttt 26787933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 35731392 - 35731429
Alignment:
Q  230 cttaaagagtgtcccggggcactcgttaacatttccct 267  Q
    ||||||||||| || |||||||||||||||||||||||    
T  35731392 cttaaagagtgcccgggggcactcgttaacatttccct 35731429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 36580274 - 36580331
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||||||| | | ||||  ||||| ||||||| ||||||||||||||||    
T  36580274 ggcttaatagcagttttcggcccctaactttcacgaagttgtgattttggtcccctaa 36580331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Original strand, 39753864 - 39753933
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||| ||| |||||| | ||||| |||| | |||||||| || ||| |||||||||||    
T  39753864 ataaaataggcttaattgcacttttggacccctatctttccaaaagttgcggttatggacccctaactaa 39753933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 45260278 - 45260217
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||  ||||| |||| | ||||||||||||||| |||||||||||    
T  45260278 ggcttaattgcatttttggctccctatctttctaaaagttgcgattttggacccctaactaa 45260217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 330
Target Start/End: Complemental strand, 45718187 - 45718134
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtc 330  Q
    |||||||||||||| |||| ||||||||  ||||| |||||||||| |||||||    
T  45718187 taggcttaatagcaatttttgcctcctaactttcacgaagttgcgaatttggtc 45718134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 6771917 - 6771981
Alignment:
Q  206 cataaaaatttactatttaaatgtcttaaagagtgtcc-cggggcactcgttaacatttccctaa 269  Q
    |||||||||||||||||||||   ||||||||||||||   ||| ||||| ||||||||||||||    
T  6771917 cataaaaatttactatttaaagtccttaaagagtgtccttagggtactcgctaacatttccctaa 6771981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 28770560 - 28770620
Alignment:
Q  208 taaaaatttactatttaaatgtcttaaagagtgtcccgg-ggcactcgttaacatttccct 267  Q
    |||||| |||||||||| |   |||||||||||| |||| |||||||||||||||||||||    
T  28770560 taaaaacttactatttagagtgcttaaagagtgttccggaggcactcgttaacatttccct 28770620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 43077726 - 43077766
Alignment:
Q  301 cctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||| || ||||||||||||||||||||||| ||||    
T  43077726 cctatgttttaacaagttgcgattttggtcccctaattaaa 43077766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 336
Target Start/End: Original strand, 43091667 - 43091723
Alignment:
Q  281 cttaatagcagttttggcctc-ctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||| |||||||| | |||||||| |||||||||||||||| ||| |||||    
T  43091667 cttaatagcaattttggcccctctatgttttaagaagttgcgattttagtcacctaa 43091723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 272 - 365
Target Start/End: Original strand, 42585979 - 42586072
Alignment:
Q  272 taaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  42585979 taaaataggcttaatagcagttttggccccctatgtttcaagaagttgcgattttgaccccctaactaaaataattcgatttcggccccctatg 42586072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 278 - 362
Target Start/End: Complemental strand, 42586402 - 42586318
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccct 362  Q
    |||||||||||||||||||||| || ||||||  ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  42586402 aggcttaatagcagttttggccccccatgtttacagaagttgcgattttggccccctaactaaaataatttgattttggccccct 42586318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 6464391 - 6464327
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  6464391 taggcttaatagcagttttggccccctatgtttcaagaagttgcgattttggccccctaactaaa 6464327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 20126432 - 20126500
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||| |||||||  ||||||||||||    
T  20126432 aaaataggcttaataggagttttggccccctatgtttcaagaagttgtgattttgaccccctaactaaa 20126500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 36361031 - 36361095
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||| |||||||||||||    
T  36361031 taggcttaattgcagttttggtcccctatgtttcaagaagttgcgattttgatcccctaactaaa 36361095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 277 - 340
Target Start/End: Original strand, 38162591 - 38162654
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| ||| |||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  38162591 taggcttaattgcacttttggccccctatgtttcaagaagttgtgattttggacccctaactaa 38162654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 128253 - 128306
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcc 331  Q
    ||||||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  128253 aggcttaatagcagttttgaccccctatgtttcaagaagttgcaattttggtcc 128306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 27016765 - 27016820
Alignment:
Q  221 tttaaatgtcttaaagagtgtcccggggcactcgttaacatttccctaatataaaa 276  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||    
T  27016765 tttaaaagtcttaaagagtggcccggggcactcgttaacattttcctaatttaaaa 27016820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 43355721 - 43355780
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||| ||||    
T  43355721 ttaatagcagttttgacctcctatatttcaagaagttgcgattttgatcctctaaataaa 43355780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 38163726 - 38163668
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| |||||||||||||| ||| |||||||||||||||||| |||||||||||    
T  38163726 ttaattgcacttttggcctcctatattttaagaagttgcgattttggccccctaactaa 38163668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 20126736 - 20126670
Alignment:
Q  277 taggcttaatagcagttttggcctcc--tatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||| |||||||||| ||  ||||||| |||||||||||||||||  ||||||||||||    
T  20126736 taggcttaataggagttttggccccccctatgttttaagaagttgcgattttgaccccctaactaaa 20126670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 22472011 - 22471953
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||| ||| ||||| ||||||||||| ||||||||||||||||||  |||||||    
T  22472011 aggcttaattgcacttttgacctcctatgttacaagaagttgcgattttgaccccctaa 22471953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 2974950 - 2974894
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccc 333  Q
    ||||||||||||||||||| ||| ||||  ||||| |||||||||||||||| ||||    
T  2974950 taggcttaatagcagtttttgccccctaactttcacgaagttgcgattttggccccc 2974894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 4146451 - 4146391
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaacta 339  Q
    |||||||| ||| |||||||| ||||| |||| | |||||| |||||||||||||||||||    
T  4146451 ggcttaattgcacttttggccccctatctttccaaaagttgtgattttggtcccctaacta 4146391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 20364680 - 20364740
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||||||||||||||||||| || |||| || ||| |||||||||||||||  ||||||||    
T  20364680 taggcttaatagcagttttgtccccctaagtatcaggaagttgcgattttgaccccctaac 20364740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 26366125 - 26366078
Alignment:
Q  292 ttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  26366125 ttttggccccctatgtttcaagaagttgtgattttgg-cccctaactaa 26366078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 35166609 - 35166549
Alignment:
Q  277 taggcttaatagcagttttggcctcc-tatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||||||||| ||| || ||  ||||| ||||||||||||||||||||||||    
T  35166609 taggcttaatagcagttttcgcccccctaactttcacgaagttgcgattttggtcccctaa 35166549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 274
Target Start/End: Complemental strand, 2863955 - 2863896
Alignment:
Q  216 tactatttaaatgtcttaaagagtgtcccgg-ggcactcgttaacatttccctaatataa 274  Q
    ||||||||||||||||||||| ||||| ||| | |||| |||||||||||| ||||||||    
T  2863955 tactatttaaatgtcttaaagtgtgtctcggtgacacttgttaacatttccataatataa 2863896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 340
Target Start/End: Original strand, 15204001 - 15204064
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| ||| |||||||| ||||| |||| | |||||| |||||||| |||||||||||    
T  15204001 taggcttaattgcacttttggccacctatctttctaaaagttgtgattttggccccctaactaa 15204064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 16039816 - 16039753
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||| || ||| |||| ||| ||||| |||| | |||||||||||||||||||||||||||    
T  16039816 taggcttgattgcacttttagccccctatctttccaaaagttgcgattttggtcccctaactaa 16039753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 36361476 - 36361413
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||| |  ||||||||| ||||| ||| |||||||||||||||||| ||| ||||||||    
T  36361476 aggcttaattggcgttttggccccctatattttaagaagttgcgattttggccccttaactaaa 36361413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 41083409 - 41083342
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||| ||||||||| ||| |||||||||||||| ||| || || |||||||||||| || ||||||||    
T  41083409 aaaagaggcttaattgcacttttggcctcctatattttaaaaaattgcgattttggccctctaactaa 41083342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 3333695 - 3333749
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||| ||| ||||  ||||| ||||||||||||||| ||||||||    
T  3333695 ttaatagcagttttcgccccctaactttcatgaagttgcgattttgatcccctaa 3333749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 10169018 - 10169076
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| |||||||| ||||| |||  | |||||||||||||||||||||||||||    
T  10169018 ttaattgcacttttggccccctatctttttaaaagttgcgattttggtcccctaactaa 10169076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 269
Target Start/End: Complemental strand, 14475032 - 14474962
Alignment:
Q  200 aattctcataaaaatttactatttaaatgtcttaaagagtgtcccgg-ggcactcgttaacatttccctaa 269  Q
    |||| ||| ||||| ||||||||| || |||||||||||||| |||| |||||| ||||||||||| ||||    
T  14475032 aattttcaaaaaaagttactatttgaaggtcttaaagagtgttccggaggcactagttaacatttctctaa 14474962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 328
Target Start/End: Complemental strand, 20512514 - 20512464
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    |||||||||||||||||| ||||| ||  ||||| ||||||||||||||||    
T  20512514 aggcttaatagcagttttcgcctcttaactttcacgaagttgcgattttgg 20512464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 31672507 - 31672553
Alignment:
Q  221 tttaaatgtcttaaagagtgtcccgggg-cactcgttaacatttccc 266  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  31672507 tttaaaggtcttaaagagtgccccgggggcactcgttaacatttccc 31672553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 36798491 - 36798433
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||||||| ||| ||||  ||||   |||||||||||||||||||||||    
T  36798491 aggcttaatagcagttttagccccctaactttctcaaagttgcgattttggtcccctaa 36798433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 38973327 - 38973388
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||||| ||||||||| ||||| ||| |||||||| |||||||||||    
T  38973327 aggcttaattgcacttttggccccctatgttttaagaaattg-gattttggccccctaactaa 38973388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 13428188 - 13428143
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttg 327  Q
    |||||||||||||||||| ||||| ||| |||||||||| ||||||    
T  13428188 ttaatagcagttttggccccctatattttaagaagttgcaattttg 13428143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Original strand, 27264101 - 27264170
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||| ||| |||||| | ||||| |||| | |||||||| || ||| |||||||||||    
T  27264101 ataaaataggcttaattgcacttttggacccctatctttccaaaagttgcggttatggacccctaactaa 27264170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Original strand, 28394925 - 28394994
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||| ||| |||||| | ||||| |||| | |||||||| || ||| |||||||||||    
T  28394925 ataaaataggcttaattgcacttttggacccctatctttccaaaagttgcggttatggacccctaactaa 28394994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 37060211 - 37060150
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||| ||||| |||| | ||||||| ||||||| |||||||||||    
T  37060211 ggcttaattgcacttttggccccctatctttccaaaagttgcaattttggacccctaactaa 37060150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 38974990 - 38974930
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||  || |||||||| ||||||||| |||||||||||| ||||| |||||||||||    
T  38974990 ggcttaattacacttttggcc-cctatgttttaagaagttgcgaatttggacccctaactaa 38974930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 18229625 - 18229565
Alignment:
Q  208 taaaaatttactatttaaatgtcttaaagagtgtcccggg-gcactcgttaacatttccct 267  Q
    |||||| |||| |||||||   |||||||||||||||||  ||||||||||||||||||||    
T  18229625 taaaaacttaccatttaaagtgcttaaagagtgtcccggaagcactcgttaacatttccct 18229565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 23023717 - 23023760
Alignment:
Q  220 atttaaatgtcttaaagagtgtcccggggcactcgttaacatttc 264  Q
    ||||||| ||||||||||||| ||||||||||||||||| |||||    
T  23023717 atttaaaggtcttaaagagtg-cccggggcactcgttaaaatttc 23023760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 34969209 - 34969153
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||||||  ||||||||||  |||||||| |||||||||||||||||| ||| ||||    
T  34969209 cttaataagagttttggccctctatgttttaagaagttgcgattttggacccataac 34969153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 42169458 - 42169422
Alignment:
Q  301 cctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||||||||||||||||||||||||| | ||||||||    
T  42169458 cctatgtttcaagaagttgcgattttagccccctaac 42169422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 7e-34; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 278 - 363
Target Start/End: Original strand, 755902 - 755987
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggcccccta 363  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  755902 aggcttaatagcagttttggccctctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggcccccta 755987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 276 - 365
Target Start/End: Complemental strand, 756174 - 756085
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  756174 ataggcttaatagcagttttggctccctatgttttaagaagttgcgattttggccctctaactaaaataattcgattttggccccctatg 756085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 273 - 365
Target Start/End: Complemental strand, 2803068 - 2802976
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||||||||||||||||||||  | |||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  2803068 aaaataggcttaatagcagttttgatcccctatgtttacagaagttgcaattttggccccctaactaaaataattcgattttggccccctatg 2802976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 281 - 365
Target Start/End: Original strand, 4461676 - 4461760
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||||||||||||||| | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4461676 cttaatagcagttttggccccttatgtttcaaaaatttgcgattttggtcccctaactaaaataattcgattttgaccccctatg 4461760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 273 - 365
Target Start/End: Complemental strand, 11289366 - 11289275
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||| |||||    
T  11289366 aaaaaaggcttaatagcagctttggccccctatgtttcaagaagttgcgattctggt-ccctaacttaaataattcgattttggcccactatg 11289275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 365
Target Start/End: Complemental strand, 26889702 - 26889619
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    |||||||||||||| | ||||||||||| |||||||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  26889702 ttaatagcagttttagtctcctatgttttaagaagttgcgattttgaccccctaactaaaataatttgattttggccccctatg 26889619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 282 - 365
Target Start/End: Complemental strand, 6041508 - 6041425
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||| | |||||||| |||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  6041508 ttaatagtatttttggccccctatgtttatagaagttgcgattttgatcccctaactaaaataattcgattttgaccccctatg 6041425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 282 - 365
Target Start/End: Complemental strand, 6045145 - 6045062
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||| | |||||||| |||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  6045145 ttaatagtatttttggccccctatgtttatagaagttgcgattttgatcccctaactaaaataattcgattttgaccccctatg 6045062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 365
Target Start/End: Original strand, 6041089 - 6041174
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  6041089 ggcttaataacagttttggccccctatgtttcaagaagttacgatttt-gacccataattaaaataattcgattttggccccctatg 6041174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 365
Target Start/End: Original strand, 6044721 - 6044806
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  6044721 ggcttaataacagttttggccccctatgtttcaagaagttacgatttt-gacccataattaaaataattcgattttggccccctatg 6044806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 365
Target Start/End: Original strand, 2802646 - 2802734
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    |||| ||||||||||||||| || ||||||| | |||||||||||||||||| ||| ||||||||||||||| |||||| |||| ||||    
T  2802646 taggtttaatagcagttttgaccccctatgtattaagaagttgcgattttggacccataactaaaataattcaattttgaccccatatg 2802734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 35795646 - 35795583
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  35795646 aggcttaattgcagttttggccccctatgtttcaagaagttgtgattttggccccctaactaaa 35795583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 17512095 - 17512159
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||| |||| |||||||||||| ||||| |||||||||||||||||||||| ||||||||||||    
T  17512095 taggcataattgcagttttggccccctatatttcaagaagttgcgattttggccccctaactaaa 17512159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 8347545 - 8347612
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| |||||||| ||| |||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  8347545 aaaattggcttaattgcacttttggcctcctatgttttaagaagttgtgattttggacccctaactaa 8347612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 23936282 - 23936340
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  23936282 ttaattgcacttttggccccctatgtttcaagaagttgcgattttggccccctaactaa 23936340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 1003463 - 1003520
Alignment:
Q  284 aatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||    
T  1003463 aatagcagttttggcctcctatattttaagaagttgcgattttggccccataactaaa 1003520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 45163761 - 45163712
Alignment:
Q  292 ttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  45163761 ttttggccccctatgtttcaagaagttgcgattttggccccctaactaaa 45163712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 45308454 - 45308515
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||||  |||||||||||    
T  45308454 ggcttaattgcacttttggccccctatgtttcaagaagttgcgattttgaacccctaactaa 45308515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 14170416 - 14170484
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||| ||||||||| ||||||||| || ||||||||| |||||||||||||||||| ||||||| ||||    
T  14170416 aaaaaaggcttaattgcagttttgaccccctatgttttaagaagttgcgattttggccccctaattaaa 14170484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 23475618 - 23475686
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||| |||||||  ||| ||||||||    
T  23475618 aaaaaaggcttaattgcagttttggccccctatgtttcaagaagttgtgattttgaccccttaactaaa 23475686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 25280007 - 25280070
Alignment:
Q  205 tcataaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacatttcccta 268  Q
    ||||||||||||||||||| |   |||||||||||| || ||||||||||||||||||||||||    
T  25280007 tcataaaaatttactattttaggctcttaaagagtgcccaggggcactcgttaacatttcccta 25280070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 26889291 - 26889341
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttg 327  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  26889291 taggcttaatagcagttttggccccctatgtttccagaagttgcaattttg 26889341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 1003860 - 1003797
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||| |||||||| || |||||||||||||||||||| |||||||  |||||||||||    
T  1003860 taggcttaataacagttttgccc-cctatgtttcaagaagttgcaattttggctccctaactaaa 1003797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 8951038 - 8951098
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||| ||||| ||| |||| ||||||||||||| ||||||||| |||||||||||||||||    
T  8951038 taggtttaattgcacttttagcctcctatgttttaagaagttgtgattttggtcccctaac 8951098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 365
Target Start/End: Complemental strand, 14508018 - 14507930
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||||||| ||||||||||| |||||  ||  ||  ||||||||||| | | ||||||||||||||||||||||||| ||| ||||    
T  14508018 taggcttaatatcagttttggccccctataattacagttgttgcgattttagcctcctaactaaaataattcgattttggtcccttatg 14507930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 45522507 - 45522447
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    ||||||||| |||||||||| || ||||||||| |||||||||||||||| | ||||||||    
T  45522507 taggcttaaaagcagttttgaccccctatgttttaagaagttgcgattttagccccctaac 45522447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 337
Target Start/End: Complemental strand, 8409879 - 8409821
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    ||||||||||||||||||| || | ||||||| |||||||||||||||||| ||||||||    
T  8409879 aggcttaatagcagttttgacc-catatgttttaagaagttgcgattttgggcccctaac 8409821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 18049531 - 18049574
Alignment:
Q  221 tttaaatgtcttaaagagtgtcccggggcactcgttaacatttc 264  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  18049531 tttaaaggtcttaaagagtgccccggggcactcgttaacatttc 18049574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 11288996 - 11289038
Alignment:
Q  323 ttttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  11288996 ttttggccccctaactaaaataatttgattttggccccctatg 11289038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 12278834 - 12278896
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| | | |||||||| ||||||||| ||||||||||||||||||  ||||||||||    
T  12278834 aggcttaattgtacttttggccccctatgttttaagaagttgcgattttggatccctaactaa 12278896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 20788034 - 20788095
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||| |||||||||||| ||||||| ||||||| || ||||||||    
T  20788034 ggcttaattgcacttttggccccctatgtttcaataagttgcaattttggccctctaactaa 20788095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 41602927 - 41602878
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgatttt 326  Q
    ||||||||||||||||||| ||| |||| ||||||| |||||||||||||    
T  41602927 taggcttaatagcagttttagccccctaagtttcaaaaagttgcgatttt 41602878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 18650944 - 18650980
Alignment:
Q  292 ttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    |||||||| ||||||||||||||||||||||||||||    
T  18650944 ttttggccccctatgtttcaagaagttgcgattttgg 18650980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 29196678 - 29196618
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||| |||||| ||||||||||| ||||| ||| |||||||||||||| |||||| |||||    
T  29196678 taggtttaataacagttttggccccctatattttaagaagttgcgattatggtcctctaac 29196618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 29340758 - 29340826
Alignment:
Q  269 atataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||||| | ||| |||||||||||||||||| ||||||||| || || |||||||||||| ||| ||||    
T  29340758 atataataaaggtttaatagcagttttggccccctatgtttaaataatttgcgattttggccccttaac 29340826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 31947851 - 31947915
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||||| ||| |||||||| ||||| |||  | ||||||||||||||| |||||||||||    
T  31947851 ataggcttaattgcacttttggccccctatcttttcaaaagttgcgattttggccccctaactaa 31947915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 33298646 - 33298590
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||| ||||||||||| ||||||||  ||||| |||||||||||||||| |||||||    
T  33298646 gcttgatagcagttttcgcctcctaactttcacgaagttgcgattttggccccctaa 33298590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 35795219 - 35795279
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||| |||||||||||| |||||||||||| ||||||| ||||||  |||||| |||||    
T  35795219 cttaattgcagttttggccccctatgtttcaaaaagttgcaattttgaccccctagctaaa 35795279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 12280413 - 12280358
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||| ||| ||||| ||| |||||||| |||||||||||||||||| |||||||    
T  12280413 cttaattgcacttttgaccttctatgttttaagaagttgcgattttggccccctaa 12280358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 17070901 - 17070964
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||| |||||||||||||||||| ||| | ||  ||||| |||||||||||||||| |||||||    
T  17070901 aaaaaaggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaa 17070964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 17577371 - 17577308
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||| |||||||||||||||||| ||| | ||  ||||| |||||||||||||||| |||||||    
T  17577371 aaaaaaggcttaatagcagttttcgccccttaactttcacgaagttgcgattttggccccctaa 17577308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 18092913 - 18092960
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    ||||||||||||||| ||| |||| ||| |||||||||||||||||||    
T  18092913 cttaatagcagttttagccccctaagttacaagaagttgcgattttgg 18092960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 27225784 - 27225842
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||| ||||||||| || ||||||||| ||||||||||||||||| | |||||||||||    
T  27225784 ttaattgcagttttgaccccctatgttttaagaagttgcgattttgat-ccctaactaaa 27225842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 267
Target Start/End: Original strand, 31265076 - 31265139
Alignment:
Q  205 tcataaaaatttactatttaaatgtcttaaagagtgtcccggg-gcactcgttaacatttccct 267  Q
    ||||||||| ||||||||| |   |||||||||||| |||||| ||||||||||||||||||||    
T  31265076 tcataaaaagttactattttaggctcttaaagagtgccccgggagcactcgttaacatttccct 31265139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 5916348 - 5916394
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgatttt 326  Q
    ||||||| ||| ||||| ||||||||||||||| |||||||||||||    
T  5916348 gcttaattgcacttttgacctcctatgtttcaaaaagttgcgatttt 5916394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 5916967 - 5916909
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| ||||||||  |||||||| |||||||||||||||| | |||||||||||    
T  5916967 ttaattgcacttttggccctctatgttttaagaagttgcgatttttgccccctaactaa 5916909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 9498907 - 9498957
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttg 327  Q
    ||||||||||| ||||||||||| |||| || ||| |||||||||||||||    
T  9498907 taggcttaataacagttttggccccctaagtatcaggaagttgcgattttg 9498957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 16982621 - 16982683
Alignment:
Q  274 aaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||| |||||||||||  || ||||  ||||| |||||||| |||||||||||||||    
T  16982621 aaataggcttgatagcagttttcaccccctaactttcacgaagttgcaattttggtcccctaa 16982683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 20169745 - 20169683
Alignment:
Q  205 tcataaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacatttccct 267  Q
    ||||| ||| |||| ||||||| |||||||||| | ||| | |||||||||||||||||||||    
T  20169745 tcatacaaagttaccatttaaaggtcttaaagaatatccggaggcactcgttaacatttccct 20169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 27633584 - 27633638
Alignment:
Q  209 aaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacattt 263  Q
    ||||||||||  ||||||  ||||||||||||||||||  |||||||||||||||    
T  27633584 aaaaatttaccttttaaaaatcttaaagagtgtcccggaacactcgttaacattt 27633638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 268
Target Start/End: Original strand, 37427296 - 37427334
Alignment:
Q  230 cttaaagagtgtcccggggcactcgttaacatttcccta 268  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  37427296 cttaaagagtgtccggaggcactcgttaacatttcccta 37427334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 45309636 - 45309574
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| ||||||||  |||| |||||||||||||| ||||||| || ||||||||    
T  45309636 aggcttaattgcacttttggccctctatatttcaagaagttgcaattttggccctctaactaa 45309574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 1657706 - 1657637
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||| ||| |||||| | ||||| |||| | |||||||| || ||| |||||||||||    
T  1657706 ataaaataggcttaattgcacttttggacccctatctttccaaaagttgcggttatggacccctaactaa 1657637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 6335649 - 6335580
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||| ||| |||||| | ||||| |||  | ||||||||||| ||| |||||||||||    
T  6335649 ataaaataggcttaattgcacttttggacccctatcttttcaaaagttgcgattatggacccctaactaa 6335580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 13520953 - 13520908
Alignment:
Q  196 caataattctcataaaaatttactatttaaatgtcttaaagagtgt 241  Q
    ||||||||||||||||||||| |||||||||  ||||||| |||||    
T  13520953 caataattctcataaaaattttctatttaaagttcttaaaaagtgt 13520908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 13610488 - 13610443
Alignment:
Q  196 caataattctcataaaaatttactatttaaatgtcttaaagagtgt 241  Q
    ||||||||||||||||||||| |||||||||  ||||||| |||||    
T  13610488 caataattctcataaaaattttctatttaaagttcttaaaaagtgt 13610443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Original strand, 14032028 - 14032097
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||| ||| |||||| | ||||| |||| | |||||||| || ||| |||||||||||    
T  14032028 ataaaataggcttaattgcacttttggacccctatctttccaaaagttgcggttatggacccctaactaa 14032097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 23702119 - 23702180
Alignment:
Q  275 aataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||||||||||| ||| | ||  |||||  ||||| |||||||||||||||||    
T  23702119 aataggcttaatagcagttttcgccccttaactttcacaaagttacgattttggtcccctaa 23702180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 30381668 - 30381581
Alignment:
Q  152 agcattctgattcaaaaaattatccactaaaaa-gtcaacggtttcaata---attctcataaaaatttactatttaaatgtcttaaa 235  Q
    |||||||| ||| || ||||||||||||||||| || ||  ||||||||    |||||||||||| ||||| ||||||||||||||||    
T  30381668 agcattctaatttaagaaattatccactaaaaaagttaattgtttcaatttctattctcataaaattttacaatttaaatgtcttaaa 30381581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 3146123 - 3146178
Alignment:
Q  208 taaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacatttc 264  Q
    |||||| ||||||||||||   |||||||||||||| ||||||||| ||||||||||    
T  3146123 taaaaacttactatttaaagtgcttaaagagtgtccgggggcactc-ttaacatttc 3146178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 10285100 - 10285163
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||||| ||| |||||||| ||||| |||| | ||||||||||||||  |||||||||||    
T  10285100 ataggcttaattgcatttttggcc-cctatctttctaaaagttgcgattttgaccccctaactaa 10285163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 11995214 - 11995254
Alignment:
Q  230 cttaaagagtgtcccgggg-cactcgttaacatttccctaa 269  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  11995214 cttaaagagtgccccgggggcactcgttaacatttccctaa 11995254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 41385339 - 41385407
Alignment:
Q  200 aattctcataaaaatttactatttaaatgtcttaaagagtgtcccgggg-cactcgttaacatttccct 267  Q
    |||| ||| |||| ||||||||||| |   ||||||||||| ||||||| |||||||||||||||||||    
T  41385339 aattttcacaaaattttactatttataacccttaaagagtgccccgggggcactcgttaacatttccct 41385407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 277 - 365
Target Start/End: Original strand, 41148163 - 41148251
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  41148163 taggcttaatagcagttttggccccctatgtttcaagaagttccgattttagccccctaactaaaataattcgattttggccccctatg 41148251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 278 - 360
Target Start/End: Complemental strand, 41148615 - 41148533
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggcccc 360  Q
    |||||||||||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  41148615 aggcttaatagcagttttggccccctatattttaagaagttgtgattttggtcccctaactaaaataatttgattttggcccc 41148533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 365
Target Start/End: Complemental strand, 53578971 - 53578883
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||||||| | ||| |||||||||||||| |||||||| ||||||||    
T  53578971 taggcttaatagccgttttggccccctatgttttaagaagttgcgattttagccccttaactaaaataatttgattttggtcccctatg 53578883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 53831152 - 53831214
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  53831152 ggcttaatagcagttttggccccctatgttttaagaagttgcgattttggtcccctaactaaa 53831214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 30064002 - 30064063
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  30064002 ggcttaatagaagttttggccccctatgttttaagaagttgcgattttggtcccctaactaa 30064063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 35830361 - 35830297
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||    
T  35830361 taggcttaatagcagttttggcctcctatatttcaagaagttgtgatttttgtcccctaaataaa 35830297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 8143034 - 8143094
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||||    
T  8143034 gcttaattgcacttttggcctcctatgttttaagaagttgcgattttggacccctaactaa 8143094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 47742229 - 47742293
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||| ||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||||||    
T  47742229 taggtttaatagcagttttgtccacctatgtttcaggaagttgcgattttggccccctaactaaa 47742293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 5548064 - 5548005
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| | ||||| ||||    
T  5548064 ttaatagcagttttggcctcctatgttttaagaagttgcgattttggcctcctaattaaa 5548005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 33168186 - 33168125
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||| ||||||||||||| |||||||| |||||||||||||||||||||    
T  33168186 ggcttaattgcactttttgcctcctatgttttaagaagtttcgattttggtcccctaactaa 33168125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 13388159 - 13388222
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||| |||||||||||| ||||||||||||||||| | |||||||| ||||||||||||    
T  13388159 taggcttaattgcagttttggccccctatgtttcaagaagtagagattttgg-cccctaactaaa 13388222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 340
Target Start/End: Original strand, 31760764 - 31760827
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| ||| ||||| |||||||||||| ||||||||| |||||||| |||||||||||    
T  31760764 taggcttaattgcacttttgacctcctatgttttaagaagttgtgattttggccccctaactaa 31760827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 5547613 - 5547679
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataa 345  Q
    |||||||||||||||||||||  || | ||||||||||||| |||||||| | ||||||||||||||    
T  5547613 ggcttaatagcagttttggccctctgtatttcaagaagttgagattttggcctcctaactaaaataa 5547679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 21552973 - 21552923
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttg 327  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  21552973 taggcttaatagcagttttggcaacctatgtttcaagaagttacgattttg 21552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 30064418 - 30064352
Alignment:
Q  275 aataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||| |||||||||  |||| |||| ||||||||||||||||||  |||||||||||    
T  30064418 aataggcttaatagtagttttggctccctaagttttaagaagttgcgattttggctccctaactaaa 30064352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 1696211 - 1696150
Alignment:
Q  209 aaaaatttactatttaaatgtcttaaagagtgtcccgggg-cactcgttaacatttccctaa 269  Q
    ||||| |||||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||    
T  1696211 aaaaagttactatttaaaagtcttaaagagtgtctcggggacactggttaacatttccctaa 1696150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 52373076 - 52373009
Alignment:
Q  200 aattctcataaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacatttcccta 268  Q
    |||| ||| ||||| |||||||||||| |||||||||||||  ||||||||||||||||| ||||||||    
T  52373076 aattttcagaaaaaattactatttaaaagtcttaaagagtg-accggggcactcgttaacgtttcccta 52373009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 1140657 - 1140618
Alignment:
Q  301 cctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  1140657 cctatgtttcaagaagttgcgattttggacccctaactaa 1140618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 3369846 - 3369905
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||||||||| ||||||| ||| |||| || |||||||||||||||||||| ||||||||    
T  3369846 aggcttaatatcagtttttgccccctaagtatcaagaagttgcgattttggccccctaac 3369905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 14816923 - 14816860
Alignment:
Q  278 aggcttaatagcagttttgg-cctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||| || |||||||||| ||||||||||||||||| |||||||||||    
T  14816923 aggcttaattgcacttttggtccccctatgtttctagaagttgcgattttggacccctaactaa 14816860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 47742655 - 47742596
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||||||| || ||||||||| |||||||| ||||||| | ||||||||||||    
T  47742655 ttaatagcagttttgaccccctatgttttaagaagttacgattttagccccctaactaaa 47742596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 12103852 - 12103802
Alignment:
Q  220 atttaaatgtcttaaagagtgtcccggggcactcgttaacatttccctaat 270  Q
    |||||||  ||||||||||||| | ||||||||||||||||||||||||||    
T  12103852 atttaaagatcttaaagagtgttctggggcactcgttaacatttccctaat 12103802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 26858343 - 26858405
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||||| ||||| |||  | |||||||||||||||||||||||||||    
T  26858343 aggcttaattgcacttttggccccctatctttttaaaagttgcgattttggtcccctaactaa 26858405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 29697836 - 29697782
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtccc 332  Q
    ||||||||||||||||||  |||||||  ||||| ||||||||||||||||||||    
T  29697836 aggcttaatagcagttttcacctcctaactttcatgaagttgcgattttggtccc 29697782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 37831595 - 37831649
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||| ||| |||| |||| |||||||||||||||||| |||||||    
T  37831595 ttaatagcagttttagccccctaagttttaagaagttgcgattttggccccctaa 37831649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 44271429 - 44271487
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| |||||||| ||||| |||||| |||||| ||||||||||||||||||||    
T  44271429 ttaattgcatttttggccccctatatttcaataagttgtgattttggtcccctaactaa 44271487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 49804410 - 49804353
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||| ||||| || ||||| ||||||||||||||||||||| ||||||||    
T  49804410 aggcttaatagcaattttgacc-cctatatttcaagaagttgcgattttgatcccctaa 49804353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 335
Target Start/End: Original strand, 53578603 - 53578661
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtccccta 335  Q
    ||||||||||| ||||||||||||| ||||||| ||| ||| |||||||||| ||||||    
T  53578603 taggcttaataacagttttggcctcttatgttttaagcagtcgcgattttggcccccta 53578661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 10308681 - 10308616
Alignment:
Q  275 aataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||| ||||||| ||| |||||||||||||| |||| | ||||||||||||||| ||| |||||||    
T  10308681 aataagcttaattgcatttttggcctcctatctttctaaaagttgcgattttggccccgtaactaa 10308616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 19536945 - 19537002
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||||||| || ||||||||||   |||||| ||||||||||||||||    
T  19536945 ggcttaatagcagttttgtccccctatgtttcccaaagttgtgattttggtcccctaa 19537002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 32692954 - 32692913
Alignment:
Q  230 cttaaagagtgtcccgg-ggcactcgttaacatttccctaat 270  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  32692954 cttaaagagtgtcccggaggcactcgttaacatttccctaat 32692913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 1139157 - 1139217
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||| ||| ||||| || |||||| ||||||||||||||||||| | |||||||||||    
T  1139157 gcttaattgcacttttgaccccctatggttcaagaagttgcgatttttgccccctaactaa 1139217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 2653948 - 2654008
Alignment:
Q  274 aaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccct 334  Q
    |||| ||||||||||||||||| ||||||||  ||| | |||||||||||||||| |||||    
T  2653948 aaattggcttaatagcagtttttgcctcctaacttttacgaagttgcgattttggccccct 2654008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 6033913 - 6033865
Alignment:
Q  292 ttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| | |||||||||||||||||||||||||| || ||||||||    
T  6033913 ttttggccccatatgtttcaagaagttgcgattttggccctctaactaa 6033865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 7388855 - 7388919
Alignment:
Q  206 cataaaaatttactatttaaatgtcttaaagagtgtcccg-gggcactcgttaacatttccctaa 269  Q
    |||||||||||||||| ||||  ||||||| ||||||||| |||||||| ||| |||||||||||    
T  7388855 cataaaaatttactatctaaagttcttaaaaagtgtcccgagggcactcattagcatttccctaa 7388919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 8672059 - 8671999
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||| ||| |||||||| | |||||||||||||||||||||||| | || ||||||||    
T  8672059 gcttaattgcacttttggccccttatgtttcaagaagttgcgattttagacctctaactaa 8671999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 341
Target Start/End: Complemental strand, 19938650 - 19938578
Alignment:
Q  269 atataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||| ||||||||| ||| ||||| |||||||| |||  | | ||||||||||||| ||||||||||||    
T  19938650 atataaaaaaggcttaattgcacttttgacctcctatatttttaaatgttgcgattttggccccctaactaaa 19938578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 25220025 - 25220069
Alignment:
Q  196 caataattctcataaaaatttactatttaaatgtcttaaagagtg 240  Q
    ||||||||||||||||| |||||||||||||  ||||||||||||    
T  25220025 caataattctcataaaattttactatttaaagatcttaaagagtg 25220069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 29344597 - 29344534
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||| |||||| | |||||| ||||    
T  29344597 taggcttaatatcagttttggcc-cctatatttcaagaagttgcaattttgattccctaaataaa 29344534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 31761903 - 31761855
Alignment:
Q  292 ttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||||| |||||||||||| ||||||||| |||||||||||    
T  31761903 ttttggccccctatatttcaagaagttacgattttggccccctaactaa 31761855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 38828505 - 38828557
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    ||||||||||| ||| ||||||||  |||||||| ||||||||||||||||||    
T  38828505 ataggcttaattgcacttttggccctctatgttttaagaagttgcgattttgg 38828557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 39906942 - 39907006
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||||| ||| ||||||||||| || |||  | |||||| ||||||||||||||||||||    
T  39906942 ataggcttaattgcatttttggcctccaatcttttcaaaagttgtgattttggtcccctaactaa 39907006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 7628054 - 7628101
Alignment:
Q  221 tttaaatgtcttaaagagtgtcccgggg-cactcgttaacatttccct 267  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  7628054 tttaaaggtcttaaagagtgccccgggggcactcgttaacatttccct 7628101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 3901759 - 3901695
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataa 345  Q
    ||||||||| ||||||| ||| ||||||||| |||||||||||||||| | ||||||| ||||||||    
T  3901759 ggcttaataacagttttagcc-cctatgttttaagaagttgcgattttagccccctaa-taaaataa 3901695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 328
Target Start/End: Complemental strand, 6033958 - 6033908
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    ||||||||| ||| |||||||| ||||| ||| ||||||||||||||||||    
T  6033958 aggcttaatcgcatttttggccccctatattttaagaagttgcgattttgg 6033908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 13825884 - 13825937
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||| ||| |||| |||| |||||||||||||||||| |||||||    
T  13825884 ttaatagcagttttagcc-cctaagttttaagaagttgcgattttgggcccctaa 13825937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 35383764 - 35383822
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||||||| ||| ||||  ||||| ||||||| |||||||| |||||||    
T  35383764 aggcttaatagcagttttcgccccctaactttcacgaagttgtgattttggccccctaa 35383822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 39907406 - 39907336
Alignment:
Q  270 tataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||||||||||| ||| |||||| | ||||| |||  | ||||| | |||||||||||||||||||    
T  39907406 tataaaataggcttaattgcacttttggtcccctatctttttaaaagttacaattttggtcccctaactaa 39907336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 340
Target Start/End: Original strand, 40489206 - 40489272
Alignment:
Q  274 aaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||||||| ||| |||| ||| ||||| |||| | ||||||||||||||| |||||||||||    
T  40489206 aaatatgcttaattgcacttttagccccctatctttctaaaagttgcgattttggccccctaactaa 40489272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 23315699 - 23315630
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||| ||| |||||| | ||||| |||| | |||||||| || ||| |||||||||||    
T  23315699 ataaaataggcttaattgcacttttggacccctatctttccaaaagttgcggttatggacccctaactaa 23315630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 341
Target Start/End: Original strand, 33641852 - 33641913
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||| |||||||||||| | ||||||| ||||| |||||||||||  | ||||||||||    
T  33641852 gcttaattgcagttttggccccttatgttttaagaaattgcgattttgacctcctaactaaa 33641913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 51436913 - 51436966
Alignment:
Q  147 ctttaagcattctgattcaaaaaattatccact-aaaaagtcaacggtttcaat 199  Q
    ||||||||||||| |||||| |||||||||| | ||||||||||| ||||||||    
T  51436913 ctttaagcattctaattcaagaaattatccagtaaaaaagtcaactgtttcaat 51436966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 53831374 - 53831326
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttg 327  Q
    ||||||| ||||||||||| || ||||||||| |||||||||||||||||    
T  53831374 aggcttactagcagttttgtcc-cctatgttttaagaagttgcgattttg 53831326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 29860653 - 29860713
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||| ||| |||||||| ||||| |||  | ||||||||||||| |||||||||||||    
T  29860653 gcttaattgcacttttggccccctatcttttcaaaagttgcgattttagtcccctaactaa 29860713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 33456132 - 33456092
Alignment:
Q  196 caataattctcataaaaa-tttactatttaaatgtcttaaa 235  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  33456132 caataattctcataaaaaatttactgtttaaatgtcttaaa 33456092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 340
Target Start/End: Complemental strand, 35364511 - 35364447
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||||| ||| |||||| ||||||| |||| | |||||||| || ||| |||||||||||    
T  35364511 ataggcttaattgcacttttggactcctatctttccaaaagttgcggttatggacccctaactaa 35364447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 51291190 - 51291230
Alignment:
Q  230 cttaaagagtgtccc-ggggcactcgttaacatttccctaa 269  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  51291190 cttaaagagtgcccccggggcactcgttaacatttccctaa 51291230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 7e-31; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 281 - 365
Target Start/End: Original strand, 12074958 - 12075042
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  12074958 cttaatagcagttttggctccctatgtttcaagaagttgcgattttgaccccctaactaaaataattcgattttggccccctatg 12075042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 278 - 363
Target Start/End: Complemental strand, 12075328 - 12075244
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggcccccta 363  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  12075328 aggcttaatagcagttttggccccctatgtttacagaagttgcgattttggccccctaactaaaataattcga-tttggcccccta 12075244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 270 - 344
Target Start/End: Complemental strand, 3815119 - 3815045
Alignment:
Q  270 tataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaata 344  Q
    |||||||||||||||||||||||||||  | |||||||||||||||||||||||||||| |||||||||||||||    
T  3815119 tataaaataggcttaatagcagttttgaacccctatgtttcaagaagttgcgattttggccccctaactaaaata 3815045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 23953160 - 23953083
Alignment:
Q  283 taatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggcccc 360  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||  ||||||||||||| ||||||||||||    
T  23953160 taatagcagttttggccccctatgtttcaagaagttgcgattttgacccctaaactaaaataatttgattttggcccc 23953083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 365
Target Start/End: Complemental strand, 2350150 - 2350064
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccctatg 365  Q
    ||||||||| ||||||||| |  |||||||| |||||||||||||||||  |||||||||||||||||||||||||| | |||||||    
T  2350150 ggcttaataacagttttggtcctctatgttttaagaagttgcgattttgaccccctaactaaaataattcgattttgactccctatg 2350064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 337
Target Start/End: Original strand, 37008218 - 37008275
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  37008218 gcttaatagcagttttggccccctatgtttcaagaagttgcgattttggccccctaac 37008275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 46895437 - 46895499
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |||||||||    
T  46895437 ggcttaatagcagttttggccccctatatttcaagaagttgcgattttgatcctctaactaaa 46895499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 51549458 - 51549393
Alignment:
Q  275 aataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||| ||| |||||||| |||| ||||||||||||||||||||||| |||||||||||    
T  51549458 aataggcttaattgcaattttggccccctaagtttcaagaagttgcgattttggacccctaactaa 51549393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 3814757 - 3814821
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||| |||||||| |||||||||||    
T  3814757 ataggcttaatagcagatttagccccctatgtttcaagaagttgtgattttggccccctaactaa 3814821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 40877057 - 40876997
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  40877057 cttaattgcagttttggccccctatgttccaagaagttgcgattttggccccctaactaaa 40876997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 41915838 - 41915774
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||||| ||||    
T  41915838 taggcttaatagcagttttggtcccctatatttcaagaagttgcgattttgatcccctaaataaa 41915774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 43117258 - 43117317
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| ||||    
T  43117258 ttaatagcagttttagccacctatgtttcaagaagttgcgattttggtcctctaaataaa 43117317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 46895855 - 46895792
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||  ||| ||||||||    
T  46895855 aggcttaattgcagttttggccccctatgtttcaagaagttgcgattttgaccccataactaaa 46895792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 7058437 - 7058376
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||  || |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  7058437 ggcttaatttcacttttggccccctatgtttcaagaagttgcgattttggacccctaactaa 7058376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 367239 - 367175
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    ||||||||||||||||||||||||  | ||||| |||||||| ||||||||||||| ||||||||    
T  367239 aaaataggcttaatagcagttttgatcccctatatttcaagaggttgcgattttggccccctaac 367175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 11932981 - 11932919
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||| |||| || |||||||||||    
T  11932981 aggcttaattgcaatttcggcctcctatgtttcaagaagttgcaatttgggacccctaactaa 11932919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 267
Target Start/End: Complemental strand, 18114468 - 18114398
Alignment:
Q  197 aataattctcataaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacatttccct 267  Q
    ||||| |||||| |||| |||||||||||| ||||||| |||||  || ||||||||||||||||||||||    
T  18114468 aataactctcatgaaaaattactatttaaaggtcttaacgagtgatccagggcactcgttaacatttccct 18114398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 3507051 - 3507103
Alignment:
Q  196 caataattctcataaaaatttactatttaaatgtcttaaagagtgtcccgggg 248  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  3507051 caatgattctcataaaaatttaatatttaaaggtcttaaagagtgccccgggg 3507103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 21258916 - 21258980
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||||| ||| ||||| || ||||||||| |||||||||||||||||| | |||||||||    
T  21258916 ataggcttaattgcacttttgaccacctatgttttaagaagttgcgattttggactcctaactaa 21258980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 45719760 - 45719701
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||| | ||||||||||||    
T  45719760 cttaattgcagttttgacctcctatgttttaagaagttgcgattttag-cccctaactaaa 45719701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 366885 - 366952
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataa 345  Q
    |||||||||||||||||||||| ||||||||| ||||||||  ||||||   |||||||| |||||||    
T  366885 aggcttaatagcagttttggccccctatgttttaagaagttatgattttaaccccctaaccaaaataa 366952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 2864225 - 2864284
Alignment:
Q  208 taaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacatttccct 267  Q
    |||||| ||||||||||||   |||||||||||  |||||||||||||||||||||||||    
T  2864225 taaaaacttactatttaaagtgcttaaagagtgctccggggcactcgttaacatttccct 2864284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 341
Target Start/End: Complemental strand, 7197030 - 7196963
Alignment:
Q  274 aaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||||||||||||| | || | ||||||| |||||||||||||||||   |||||||||||    
T  7197030 aaataggcttaatagcagtttcgaccccttatgttttaagaagttgcgattttgactccctaactaaa 7196963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 340
Target Start/End: Original strand, 50503699 - 50503762
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||||  || |||||| | ||||||||| |||||||||||||||||| |||||||||||    
T  50503699 taggcttaatttcacttttggtcccctatgttttaagaagttgcgattttggccccctaactaa 50503762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 340
Target Start/End: Original strand, 51462179 - 51462241
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| | | |||||||| |||||||||||||||||||||||||||| || ||||||||    
T  51462179 taggcttaattgtacttttggcc-cctatgtttcaagaagttgcgattttggacctctaactaa 51462241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 3612503 - 3612445
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||||||| | | |||| |||||||||||||| |||||||||| |||||    
T  3612503 aggcttaatagcagttttagtcccctaagtttcaagaagttgagattttggtctcctaa 3612445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 7196676 - 7196738
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||||||| ||  |||| |||||||||||||||||||||| |  |||||||||    
T  7196676 ggcttaatagcagttttgaccctctatatttcaagaagttgcgattttggcctgctaactaaa 7196738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 44743793 - 44743735
Alignment:
Q  269 atataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttg 327  Q
    |||| ||||||| |||||| ||||||||||| || ||||||| ||||||||||||||||    
T  44743793 atattaaataggtttaatatcagttttggcccccaatgtttccagaagttgcgattttg 44743735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 49696980 - 49696918
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||||| ||||||||||||||||||| |||||| | ||| |||||||    
T  49696980 aggcttaattgcatttttggccccctatgtttcaagaagttgtgattttagacccttaactaa 49696918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 25486536 - 25486479
Alignment:
Q  269 atataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgatttt 326  Q
    ||||||| ||||||||||||||||||| ||| ||||  ||||| ||||||||||||||    
T  25486536 atataaattaggcttaatagcagtttttgccccctaactttcacgaagttgcgatttt 25486479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 14758638 - 14758702
Alignment:
Q  205 tcataaaaatttactatttaaatgtcttaaagagtgtcc-cggggcactcgttaacatttcccta 268  Q
    ||||||||||||||||||||||   ||||||||||||||   | |||||||||||||||||||||    
T  14758638 tcataaaaatttactatttaaagtccttaaagagtgtccttagagcactcgttaacatttcccta 14758702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 15788408 - 15788472
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||| ||||||| | |   |||||||||||||||||||||| |||| ||||||||||||    
T  15788408 taggcttaattgcagtttcgacactctatgtttcaagaagttgcgatattggccccctaactaaa 15788472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 368
Target Start/End: Original strand, 23952730 - 23952786
Alignment:
Q  312 agaagttgcgattttggtcccctaactaaaataattcgattttggccccctatgctt 368  Q
    ||||||||| ||||||  || |||||||||||||||||||||||| ||| |||||||    
T  23952730 agaagttgcaattttgaccctctaactaaaataattcgattttggtcccttatgctt 23952786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 342
Target Start/End: Original strand, 39642199 - 39642263
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaa 342  Q
    |||||||||||||||||| ||| ||||  ||||| |||||||||||||||| || |||| |||||    
T  39642199 aggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggccctctaaataaaa 39642263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 50504851 - 50504803
Alignment:
Q  292 ttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| || ||||||||| |||||||||||||||||| |||||||||||    
T  50504851 ttttgaccccctatgttttaagaagttgcgattttggacccctaactaa 50504803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 4476261 - 4476198
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||| ||||||||| ||| ||||||||  |||| ||| |||||||||||||||||| |||||||    
T  4476261 aaaaaaggcttaattgcacttttggccctctatattttaagaagttgcgattttggccccctaa 4476198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 13344491 - 13344428
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||| ||||| ||| |||||||| ||||| |||  | |||||||||||||||||||||||||||    
T  13344491 taggtttaattgcacttttggccccctattttttcaaaagttgcgattttggtcccctaactaa 13344428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 40345650 - 40345595
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    |||| |||||||||| || |||||||||| ||||||| || |||||||||||||||    
T  40345650 aaaaaaggcttaataacaattttggcctcttatgttttaaaaagttgcgattttgg 40345595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 40876700 - 40876762
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||| ||||||||| || ||||| ||||||||||||| |||||| | | ||||||||||    
T  40876700 ggcttaattgcagttttgaccccctatatttcaagaagttgtgattttagccacctaactaaa 40876762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 41611244 - 41611302
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| |||||||| ||||| |||| | ||||||||||||||| |||||||||||    
T  41611244 ttaattgcacttttggccccctatttttccaaaagttgcgattttggccccctaactaa 41611302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 266
Target Start/End: Original strand, 45640630 - 45640688
Alignment:
Q  209 aaaaatttactatttaaatgtcttaaagagtgtcccgggg-cactcgttaacatttccc 266  Q
    ||||| ||||||||||||   ||||||||||||| ||||| ||||||||||||||||||    
T  45640630 aaaaacttactatttaaaatgcttaaagagtgtctcggggacactcgttaacatttccc 45640688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 340
Target Start/End: Complemental strand, 50877859 - 50877809
Alignment:
Q  290 agttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||| ||||| ||||||||| ||||||||||||| |||| |||||||||||    
T  50877859 agttctggccacctatgttttaagaagttgcgatattggccccctaactaa 50877809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 2568958 - 2568995
Alignment:
Q  231 ttaaagagtgtcccgg-ggcactcgttaacatttccct 267  Q
    |||||||||||||||| |||||||||||||||||||||    
T  2568958 ttaaagagtgtcccggaggcactcgttaacatttccct 2568995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 3506979 - 3507016
Alignment:
Q  147 ctttaagcattctgattcaaaaaattatccactaaaaa 184  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  3506979 ctttaagcattctaattcaagaaattatccactaaaaa 3507016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 6129683 - 6129618
Alignment:
Q  277 taggcttaatagcagttttggcctcc-tatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||| ||||||||| || || ||||||| |||| ||||||||||| | ||||||||||||    
T  6129683 taggcttaattgcagttttgacccccctatgttttaagatgttgcgatttttgccccctaactaaa 6129618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 34046461 - 34046497
Alignment:
Q  230 cttaaagagtgtcccggggcactcgttaacatttccct 267  Q
    |||||||||||||| |||||||||||||||||||||||    
T  34046461 cttaaagagtgtcc-ggggcactcgttaacatttccct 34046497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 40377131 - 40377187
Alignment:
Q  215 ttactatttaaatgtcttaaagagtgtcccggggcactcgttaacatttccctaata 271  Q
    |||| ||||||| | |||||  |||| || |||||||||||||||||||||||||||    
T  40377131 ttaccatttaaaggccttaactagtgccctggggcactcgttaacatttccctaata 40377187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 278 - 363
Target Start/End: Original strand, 8030125 - 8030210
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggcccccta 363  Q
    |||||||||||||||||||||| |||||||||  ||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  8030125 aggcttaatagcagttttggccccctatgtttacagaagttgcaattttggtcccctaactaaaataattcgattatggcccccta 8030210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 279 - 363
Target Start/End: Original strand, 4856709 - 4856792
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggcccccta 363  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  4856709 ggcttaatagcagttttggccccttatgtttcaagaagttgcgatttt-gacccctaactaaaataattcgattttggcccccta 4856792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 273 - 341
Target Start/End: Complemental strand, 14816117 - 14816049
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  14816117 aaaataggcttaatagcagttttggccccctatgtttcaagaagttgcgattttggccccctaactaaa 14816049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 14815698 - 14815760
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  14815698 ggcttaatagcagttttggccccctatgtttcaagaagttgcggttttggtcccttaactaaa 14815760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 12802519 - 12802456
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||    
T  12802519 aggcttaatagcagttttggctccctatgtttcaagaagttgcgattttggtcttctaactaaa 12802456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 39672737 - 39672673
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||| ||||||||    
T  39672737 ataggcttaattgcagttttggcc-cctatgtttcaagaagttgtgattttggtcccataactaaa 39672673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 14984015 - 14983953
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  14984015 aggcttaattgcacttttggccccgtatgttttaagaagttgcgattttggtcccctaactaa 14983953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 11363882 - 11363943
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||| ||||||||||||||||||||||||||||  ||||||||||    
T  11363882 ggcttaattgcatttttggccccctatgtttcaagaagttgcgattttggctccctaactaa 11363943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 341
Target Start/End: Complemental strand, 17850547 - 17850486
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||||||| | ||||||||||    
T  17850547 gcttaatagtagttttggccccctatgttttaagaagttgcgattttggcctcctaactaaa 17850486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 340
Target Start/End: Complemental strand, 52356 - 52292
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||||| ||| |||||||| ||||||||| ||||| |||||||||||| |||||||||||    
T  52356 ataggcttaattgcacttttggccccctatgttttaagaatttgcgattttggccccctaactaa 52292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 35500407 - 35500347
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||||||||||| ||||||||   |||||||||||||||||||||||||||| ||||||||    
T  35500407 taggcttaatagtagttttggggccctatgtttcaagaagttgcgattttggccccctaac 35500347  T

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Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 340
Target Start/End: Original strand, 21631816 - 21631879
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||| ||||| ||| |||||||| ||||||||||| |||||||||||||||| |||||||||||    
T  21631816 taggtttaattgcacttttggccccctatgtttcatgaagttgcgattttggccccctaactaa 21631879  T

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Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 44078605 - 44078542
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||| ||||| ||| |||||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  44078605 taggtttaattgcacttttggccccctatgttttaagaagttgcgattttggttccctaactaa 44078542  T

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Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 28719316 - 28719378
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||  |||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  28719316 aggcttaattgcccttttggccccctatgttttaagaagttgcgattttggccccctaactaa 28719378  T

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Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 334
Target Start/End: Original strand, 29370719 - 29370771
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccct 334  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||| ||||||    
T  29370719 ttaatagaagttttggccccctatgttttaagaagttgcgattttgatcccct 29370771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 8740498 - 8740440
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||  ||| ||||||||    
T  8740498 ttaattgcagttttggcc-cctatgtttcaagaagttgcgattttgaccccttaactaaa 8740440  T

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Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 9781000 - 9780937
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||| |||||||||||| | ||||||| || |||||||||||||| ||| |||||||||    
T  9781000 aggcttaattgcagttttggccccttatgttttaaaaagttgcgattttgatcctctaactaaa 9780937  T

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Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 20650368 - 20650427
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||| |||||||| |||||||    
T  20650368 taggcttcatagcagttttagccccctaagtttcaagaagttgagattttggccccctaa 20650427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 21633383 - 21633320
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| ||| |||||||| ||||||||| |||||||||| | ||||| |||||||||||    
T  21633383 taggcttaattgcacttttggccccctatgttttaagaagttgcaactttggacccctaactaa 21633320  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 23685817 - 23685883
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||| | | |||||||| ||||||||||||||||||||||||||   |||||||||||    
T  23685817 aaaataggcttaattggacttttggcc-cctatgtttcaagaagttgcgattttttccccctaactaa 23685883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 325
Target Start/End: Original strand, 35500039 - 35500086
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattt 325  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||    
T  35500039 aggcttaatagcagttttggccccctatgtttcaaaaagttgtgattt 35500086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 43741820 - 43741754
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||| ||||||||| ||| |||||| | | ||||||||||||||||||||||||| ||||||||||||    
T  43741820 aaaaaaggcttaattgcacttttggtcgc-tatgtttcaagaagttgcgattttgatcccctaactaa 43741754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 44469645 - 44469606
Alignment:
Q  196 caataattctcataaaaatttactatttaaatgtcttaaa 235  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  44469645 caataattctcataaaaatttactatttaaaagtcttaaa 44469606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 21004785 - 21004859
Alignment:
Q  200 aattctcataaaaatttactatttaaatgtcttaaagagtgtccc-ggggcactcgttaacatttccctaatata 273  Q
    |||| ||| ||||| |||| ||||||| ||||||||||||| ||| |||| |||||||||||||||||| |||||    
T  21004785 aattttcaaaaaaaattaccatttaaaagtcttaaagagtgccccaggggaactcgttaacatttcccttatata 21004859  T

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Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 24765439 - 24765484
Alignment:
Q  230 cttaaagagtgtcccggggcactcgttaacatttccctaatataaaa 276  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  24765439 cttaaagagtg-cccggggcactcgttaacatttccctaatttaaaa 24765484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 36286468 - 36286406
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||||| ||||| |||| | ||||||||||||||| |||||||||||    
T  36286468 aggcttaattgcacttttggccccctatctttccaaaagttgcgattttggccccctaactaa 36286406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 43890103 - 43890161
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| |||||| | ||||||||| |||||||||||||||||||||| |||||||    
T  43890103 ttaattgcacttttggtcccctatgtttgaagaagttgcgattttggtcccttaactaa 43890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 44077070 - 44077131
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||||| | ||||||||||||||||| |||||||| |||||||||||    
T  44077070 aggcttaattgcacttttggcc-cttatgtttcaagaagttgtgattttggacccctaactaa 44077131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 10857339 - 10857400
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||| ||||| |||| | ||||||||||||||| |||||||||||    
T  10857339 ggcttaattgcacttttggccccctatctttccaaaagttgcgattttggccccctaactaa 10857400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 15023152 - 15023095
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||||||  |||||||    
T  15023152 ggcttaatagcagttttggccccctaactttcaagaagttgtgattttgaccccctaa 15023095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 16143668 - 16143728
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||  || |||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  16143668 ggcttaatttcatttttggcc-cctatatttcaagaagttgcgattttggccccctaactaa 16143728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 23049874 - 23049817
Alignment:
Q  283 taatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||| ||| ||||||||  ||||||||||||||||||||||||||| || ||||||||    
T  23049874 taattgcacttttggccctctatgtttcaagaagttgcgattttggacctctaactaa 23049817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 32661748 - 32661687
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||| ||||| |||| | ||||||||||||||| |||||||||||    
T  32661748 ggcttaattgcacttttggccccctatctttccaaaagttgcgattttggccccctaactaa 32661687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 2393067 - 2393004
Alignment:
Q  205 tcataaaaatttactatttaaatgtcttaaagagtgtcccgg-ggcactcgttaacatttccct 267  Q
    ||||| ||| ||||||| |||| ||||||||||||| ||||| ||||||||||||| |||||||    
T  2393067 tcatacaaagttactatataaaggtcttaaagagtgccccggaggcactcgttaacctttccct 2393004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 3882719 - 3882758
Alignment:
Q  229 tcttaaagagtgtcccgggg-cactcgttaacatttccct 267  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3882719 tcttaaagagtgtcccgggggcactcgttaacatttccct 3882758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 12542476 - 12542409
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||| ||| ||||||||  |||| |||  | ||||||||||||||| |||||||||||    
T  12542476 aaaataggcttaattgcacttttggccctctatcttttcaaaagttgcgattttggccccctaactaa 12542409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 14289265 - 14289323
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    ||||||||||||||||||  ||||||| || ||| |||||||||||||||| ||||||||    
T  14289265 aggcttaatagcagttttt-cctcctaagtatcatgaagttgcgattttggccccctaac 14289323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 14489526 - 14489475
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    ||||||||||||||||||| ||| ||||  ||||| ||||||||||||||||    
T  14489526 taggcttaatagcagttttcgccccctaactttcacgaagttgcgattttgg 14489475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 19206136 - 19206199
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||||||| |||| ||| ||||  |||||  ||||||||||||||| |||||||    
T  19206136 aaaataggcttaatagcaattttcgccccctaattttcacaaagttgcgattttggccccctaa 19206199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 335
Target Start/End: Original strand, 20662516 - 20662571
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtccccta 335  Q
    ||||||||| ||||||  || |||| |||| |||||||||||||||||||||||||    
T  20662516 gcttaatagtagttttaaccccctaagtttaaagaagttgcgattttggtccccta 20662571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 340
Target Start/End: Original strand, 23048288 - 23048351
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||| ||| ||| |||||||| | ||| ||| |||||||||||||||||| |||||||||||    
T  23048288 taggctaaattgcatttttggccccttatattttaagaagttgcgattttggccccctaactaa 23048351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 23280946 - 23280883
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| ||| ||||| || ||||| |||| | ||||||||||||||| |||||||||||    
T  23280946 taggcttaattgcacttttgtccccctatctttctaaaagttgcgattttggccccctaactaa 23280883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 340
Target Start/End: Complemental strand, 41072151 - 41072080
Alignment:
Q  269 atataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||||| ||| |||||| | ||||| |||| | |||||||| || ||| |||||||||||    
T  41072151 atataaaataggcttaattgcatttttggacccctatctttccaaaagttgcggttatggacccctaactaa 41072080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 2755264 - 2755202
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||||| ||||| |||  | ||||||||||||||| |||||||||||    
T  2755264 aggcttaattgcacttttggccccctatcttttcaaaagttgcgattttggccccctaactaa 2755202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 328
Target Start/End: Original strand, 4423421 - 4423470
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    ||||||||| |||||||||||| | ||||||| ||||||||||||||||||    
T  4423421 aggcttaattgcagttttggcc-cttatgttttaagaagttgcgattttgg 4423470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 30559280 - 30559242
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttg 319  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  30559280 cttaatagcagttttcgccccctatgtttcaagaagttg 30559242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 328
Target Start/End: Complemental strand, 36177405 - 36177355
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    |||||||||| ||||||| ||| | || |||||||||||||||||||||||    
T  36177405 aggcttaataacagttttagccccttaagtttcaagaagttgcgattttgg 36177355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 44618052 - 44617998
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtccc 332  Q
    ||||||||||||||||||  ||  |||  ||||||||||||||||||||||||||    
T  44618052 aggcttaatagcagttttaaccctctaactttcaagaagttgcgattttggtccc 44617998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 8740151 - 8740216
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||| ||||||||  || ||||| ||| |||||||||||||||||  || |||||||||    
T  8740151 ataggcttaattgcagttttaaccccctatattttaagaagttgcgattttgaccctctaactaaa 8740216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 31227199 - 31227154
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttg 327  Q
    |||||||||||||||||||||||  | ||| |||||||||||||||    
T  31227199 ttaatagcagttttggcctcctaaatatcaggaagttgcgattttg 31227154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 34600543 - 34600596
Alignment:
Q  275 aataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    |||||||||||| ||| |||||||| ||||| |||| | |||||||||||||||    
T  34600543 aataggcttaattgcacttttggccccctatctttccaaaagttgcgattttgg 34600596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 34679404 - 34679347
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||||||| ||| ||||  ||||| ||||||| |||||||| |||||||    
T  34679404 ggcttaatagcagtttttgccccctaactttcacgaagttgtgattttggccccctaa 34679347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 36176981 - 36177038
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||||||| |||  ||| |||||| |||||||||||||| | |||||||    
T  36176981 ggcttaatagcagttttagccctctaagtttcacgaagttgcgattttagccccctaa 36177038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 7271859 - 7271919
Alignment:
Q  205 tcataaaaatttactatttaaatgtcttaaagagtgtcccgg-ggcactcgttaacatttc 264  Q
    ||||||||| |||  ||||||| |||||| |||||||||||| | ||||||||||||||||    
T  7271859 tcataaaaagttatcatttaaaagtcttatagagtgtcccggcgacactcgttaacatttc 7271919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 340
Target Start/End: Original strand, 16238125 - 16238173
Alignment:
Q  292 ttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||| |||  | ||||||||||||||| |||||||||||    
T  16238125 ttttggcctcctattttttcaaaagttgcgattttggccccctaactaa 16238173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 19399183 - 19399239
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||| |||| ||||||||  ||||   |||||||||||||||||||||||    
T  19399183 gcttaatagcaattttagcctcctaactttctcaaagttgcgattttggtcccctaa 19399239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 23993975 - 23993915
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||| |||||||||||||||||  |||| || | |||||||||| ||||||| ||||||||    
T  23993975 taggtttaatagcagttttggctccctaagtattaagaagttgcaattttggccccctaac 23993915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 28451640 - 28451699
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||| ||| |||||||| ||||| |||| | ||||||||||||||| |||||||||||    
T  28451640 gcttaattgcacttttggccccctatctttctaaaagttgcgattttgg-cccctaactaa 28451699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 35317924 - 35317964
Alignment:
Q  229 tcttaaagagtgtcccggg-gcactcgttaacatttcccta 268  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  35317924 tcttaaagagtgtctcgggtgcactcgttaacatttcccta 35317964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 44297561 - 44297620
Alignment:
Q  277 taggcttaatagcagttttggcctcct-atgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||| |||| ||||||| || |||||| ||||||||||||||| |||||||    
T  44297561 taggcttaatagcacttttagcctcctaatttttcaa-aagttgcgattttggccccctaa 44297620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 276 - 341
Target Start/End: Complemental strand, 53255341 - 53255276
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  53255341 ataggcttaatagcagttttggcctcctatgttttaagaagttgcgattttggccccctaactaaa 53255276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 274 - 340
Target Start/End: Original strand, 51224921 - 51224987
Alignment:
Q  274 aaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| || ||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51224921 aaataggcttgattgcacttttggcctcctatgtttcaagaagttgcgattttggccccctaactaa 51224987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 341
Target Start/End: Original strand, 53254952 - 53255025
Alignment:
Q  268 aatataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||| || ||||||||| ||||||||||| |||||||||||||||||||||||||||| || |||||||||    
T  53254952 aatataatattggcttaataacagttttggccccctatgtttcaagaagttgcgattttggccctctaactaaa 53255025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 40988597 - 40988659
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||||  ||||||||||||||||||||||||||||||||||||||||    
T  40988597 aggcttaattgcacttttggctccctatgtttcaagaagttgcgattttggtcccctaactaa 40988659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 17258247 - 17258186
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||||||||||| ||||||||    
T  17258247 ataggcttaattgcacttttggccccctatgtttcaagaagttgcgattttggacccctaac 17258186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 3355001 - 3354941
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    ||||||||||||||| ||||||| |||| || |||||||||||||||||||||||||||||    
T  3355001 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 3354941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 353
Target Start/End: Complemental strand, 6128562 - 6128492
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattt 353  Q
    ||||||||||||||||||  |||| ||| |||||||||||||||| | ||||||||||||||||||||||||    
T  6128562 ttaatagcagttttggcccactatattttaagaagttgcgatttt-gacccctaactaaaataattcgattt 6128492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 2181315 - 2181373
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||||| ||||||||    
T  2181315 ggcttaattgcacttttggccccctatgtttcaagaagttgcgattttggacccctaac 2181373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 17256559 - 17256629
Alignment:
Q  270 tataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| |||||| ||| |||||||| ||||| |||||||||||||| ||||||| |||||||||||    
T  17256559 tataaaatagacttaattgcacttttggccccctatatttcaagaagttgcaattttggccccctaactaa 17256629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 33944927 - 33944862
Alignment:
Q  275 aataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||| ||| ||||||||  ||||||||||||||||||||||||||  |||||||||||    
T  33944927 aataggcttaattgcacttttggccctctatgtttcaagaagttgcgattttgaacccctaactaa 33944862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 341
Target Start/End: Complemental strand, 37755250 - 37755189
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||||| | ||||||||||||    
T  37755250 gcttaattgcagttttggccccctatgtttcatgaagttgcgattttagccccctaactaaa 37755189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 32772081 - 32772033
Alignment:
Q  292 ttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  32772081 ttttggccccctatgtttcaagaagttgtgattttggtcccctaactaa 32772033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 32831543 - 32831480
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||  |||||||||| ||||||||| || ||||||| ||||||||||||||||||||    
T  32831543 aggcttaataatagttttggccccctatgtttaaaaaagttgcaattttggtcccctaactaaa 32831480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 5636718 - 5636660
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||||||| || ||||||||    
T  5636718 ttaattgcacttttgacctcctatgtttcaagaagttgcgattttggacctctaactaa 5636660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 32831161 - 32831209
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    |||||||||||||||||||| |||||||||||||||||| | |||||||    
T  32831161 gcttaatagcagttttggccccctatgtttcaagaagttacaattttgg 32831209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 36315790 - 36315850
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||| |||  |||||||  ||||||||||||||||||||||||||| |||||||||||    
T  36315790 gcttaattgcacctttggcccactatgtttcaagaagttgcgattttggacccctaactaa 36315850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 50380152 - 50380212
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||| ||| ||||||||  |||||||| |||||||||||||||||| |||||||    
T  50380152 ataggcttaattgcacttttggccctctatgttttaagaagttgcgattttggccccctaa 50380212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 51453544 - 51453603
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||||||| || ||||||||| |||||||||||||||||  ||||||||||||    
T  51453544 cttaatagcagttttgacc-cctatgttttaagaagttgcgattttgaccccctaactaaa 51453603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 329
Target Start/End: Complemental strand, 1807487 - 1807436
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggt 329  Q
    |||||||||||||||||||||| ||||| ||| ||||| |||||||||||||    
T  1807487 aggcttaatagcagttttggccccctatattttaagaatttgcgattttggt 1807436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 340
Target Start/End: Original strand, 33943524 - 33943595
Alignment:
Q  269 atataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||| ||||| ||||||| ||| |||||||| | ||||||| |||||||| |||||||| ||||||||||||    
T  33943524 atattaaataagcttaattgcacttttggccccttatgttttaagaagtttcgattttgatcccctaactaa 33943595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 49002817 - 49002754
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| ||| ||||||||  |||  |||||||||||||||||||||| |||||||||||    
T  49002817 taggcttaattgcacttttggccctctaattttcaagaagttgcgattttggacccctaactaa 49002754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 50381622 - 50381559
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||| ||| ||| |||||||  |||||||||||||||||||||||||||| ||| |||||||    
T  50381622 taggctcaattgcacttttggctccctatgtttcaagaagttgcgattttggacccttaactaa 50381559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 340
Target Start/End: Original strand, 54476041 - 54476104
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| ||| |||||||| ||||| ||| |||||||||||||||||  |||||||||||    
T  54476041 taggcttaattgcacttttggccccctatattttaagaagttgcgattttgaccccctaactaa 54476104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 10732458 - 10732400
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| |||||||| | |||||||||||||||||||||||| | |||||||||||    
T  10732458 ttaattgcacttttggccccttatgtttcaagaagttgcgattttcgacccctaactaa 10732400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 32770650 - 32770712
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||  |||||| | |||||||||||||||||||||||||||| | |||||||||    
T  32770650 aggcttaattgcgtttttggtcccctatgtttcaagaagttgcgattttggactcctaactaa 32770712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 40989713 - 40989655
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||| ||| |||||||| ||||||||||||||||||| || ||||| |||||||    
T  40989713 aggcttaattgcacttttggccccctatgtttcaagaagttgtgagtttggacccctaa 40989655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 51226561 - 51226503
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| |||||| | ||||||||| |||||||||||||||||| |||||||||||    
T  51226561 ttaattgcacttttggtcccctatgttttaagaagttgcgattttggacccctaactaa 51226503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 3193099 - 3193038
Alignment:
Q  275 aataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||||||||||  || ||||  |||||||||||||||||||||  |||||||    
T  3193099 aataggcttaatagcagttttcaccccctaactttcaagaagttgcgattttgaccccctaa 3193038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 33447285 - 33447224
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||| | ||||||||| ||||||||||||||||||| |||| |||||    
T  33447285 ggcttaattgcacttttggtcccctatgttttaagaagttgcgattttggttccctgactaa 33447224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 35495261 - 35495208
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtccc 332  Q
    |||||||| ||| |||||||| | ||| ||||||||||||||||||||||||||    
T  35495261 ggcttaattgcacttttggccccttatatttcaagaagttgcgattttggtccc 35495208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 50420936 - 50420887
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttg 327  Q
    ||||||||||||||||||||||||||| || | | |||||||||||||||    
T  50420936 aggcttaatagcagttttggcctcctaagtattatgaagttgcgattttg 50420887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 340
Target Start/End: Complemental strand, 54716832 - 54716759
Alignment:
Q  267 taatataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| |||| ||||||||| ||| |||||| | ||||| |||  | |||||||||||||||||||||||||||    
T  54716832 taataaaaaaaaggcttaattgcacttttggtcacctatctttttaaaagttgcgattttggtcccctaactaa 54716759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 55228107 - 55228059
Alignment:
Q  292 ttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||||| ||| |||||||||||||||||| |||||||||||    
T  55228107 ttttggccccctatattttaagaagttgcgattttggacccctaactaa 55228059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 1807691 - 1807656
Alignment:
Q  302 ctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||||||| |||||||||||||||||||||||||||    
T  1807691 ctatgttttaagaagttgcgattttggtcccctaac 1807656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 330 - 365
Target Start/End: Complemental strand, 8241265 - 8241230
Alignment:
Q  330 cccctaactaaaataattcgattttggccccctatg 365  Q
    |||||||||||||||||||||||| |||||||||||    
T  8241265 cccctaactaaaataattcgatttcggccccctatg 8241230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 42686480 - 42686539
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||| ||||||||||||||  ||||||| ||||||| ||||||||||||||  |||||||    
T  42686480 taggtttaatagcagttttaacctcctaagtttcaaaaagttgcgattttgaccccctaa 42686539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 46934033 - 46934100
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||| ||| |||||||| ||||| |||  | ||||||||||||| | |||||||||||    
T  46934033 aaaataggcttaattgcacttttggccccctatcttttcaaaagttgcgattttagccccctaactaa 46934100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 46934303 - 46934240
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| ||| |||||||| ||||| |||| | ||||||||||| ||| |||||||||||    
T  46934303 taggcttaattgcacttttggccccctatctttccaaaagttgcgattatggccccctaactaa 46934240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 20432189 - 20432247
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||||||| ||| ||||  ||| | |||||||||| |||||||||||||    
T  20432189 aggcttaatagcagtttttgccccctaacttttacgaagttgcgactttggtcccctaa 20432247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 339
Target Start/End: Original strand, 33445781 - 33445839
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaacta 339  Q
    |||||| ||| ||||| ||  ||||||||||||||||||||||| ||| ||||||||||    
T  33445781 cttaattgcacttttgaccctctatgtttcaagaagttgcgattgtggacccctaacta 33445839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 1807079 - 1807123
Alignment:
Q  275 aataggcttaatagcagttttggcctcctatgtttcaagaagttgc 320  Q
    |||||||| |||||||||||| ||| ||||||||||||||||||||    
T  1807079 aataggctaaatagcagttttagcc-cctatgtttcaagaagttgc 1807123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 5635348 - 5635409
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| ||| |||| |||||||||||||| ||||  ||||||| |||||||||||    
T  5635348 ggcttaattgcactttcggccccctatgtttcaagatgttgtcattttggccccctaactaa 5635409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 8957697 - 8957750
Alignment:
Q  210 aaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacattt 263  Q
    |||| ||||| ||||||  ||||||||||||||| || ||||||||||||||||    
T  8957697 aaaagttactttttaaagatcttaaagagtgtccgggagcactcgttaacattt 8957750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 335
Target Start/End: Original strand, 14340732 - 14340789
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtccccta 335  Q
    ||||||||||| |||||| ||| ||||  ||||| |||||| ||||||||||||||||    
T  14340732 aggcttaataggagttttcgccccctaactttcacgaagttacgattttggtccccta 14340789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 43001946 - 43001877
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||| ||||||||| ||| |||||||| ||||| |||  | || |||||||||||| |||||||||||    
T  43001946 ataaaaaaggcttaattgcacttttggccccctatctttttaaaaattgcgattttggccccctaactaa 43001877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Original strand, 44177280 - 44177349
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||| ||| |||||| | ||||| |||| | |||||||| || ||| |||||||||||    
T  44177280 ataaaataggcttaattgcacttttggacccctatctttccaaaagttgcggttatggacccctaactaa 44177349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Original strand, 44183964 - 44184033
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||| ||| |||||| | ||||| |||| | |||||||| || ||| |||||||||||    
T  44183964 ataaaataggcttaattgcacttttggacccctatctttccaaaagttgcggttatggacccctaactaa 44184033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 44895637 - 44895710
Alignment:
Q  267 taatataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| |||||||||||||| ||| |||||| | ||||| |||  | ||||||||||| ||| |||||||||||    
T  44895637 taataaaaaataggcttaattgcacttttggacccctatctttttaaaagttgcgattatggacccctaactaa 44895710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 47922130 - 47922191
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||||||||| |||| | |||||| |||||||| ||| |||||||    
T  47922130 ggcttaattgcatttttggcctcctatttttctaaaagttgtgattttggccccttaactaa 47922191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 86881 - 86821
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||| |||||| | | ||||  ||||| |||||||||||||||| |||||||    
T  86881 ataggcttaataggagttttcgtcccctaactttcatgaagttgcgattttggccccctaa 86821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 28204477 - 28204537
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||||||||||||||||| ||| | ||  ||||| |||||||||||||||  |||||||    
T  28204477 ataggcttaatagcagttttcgccccttaactttcacgaagttgcgattttgaccccctaa 28204537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 328
Target Start/End: Original strand, 35494023 - 35494051
Alignment:
Q  300 tcctatgtttcaagaagttgcgattttgg 328  Q
    |||||||||||||||||||||||||||||    
T  35494023 tcctatgtttcaagaagttgcgattttgg 35494051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 40410190 - 40410126
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtt-tcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| ||| |||||||| ||||| || || | ||||||||||||||| |||||||||||    
T  40410190 taggcttaattgcacttttggccccctatcttgtccaaaagttgcgattttggccccctaactaa 40410126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 44457481 - 44457445
Alignment:
Q  298 cctcctatgtttcaagaagttgcgattttggtcccct 334  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  44457481 cctcctatgtttcaaaaagttgcgattttggccccct 44457445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 55094678 - 55094630
Alignment:
Q  292 ttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||||| ||| || |||||| ||||||||||||||||||||    
T  55094678 ttttggccacctatattttaaaaagttgtgattttggtcccctaactaa 55094630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 2078180 - 2078242
Alignment:
Q  292 ttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttg 355  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  2078180 ttttggcc-cctatgtttcaagaagttgcgattttgaccccctaactaaaataattcgattttg 2078242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 28574620 - 28574559
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  28574620 ggcttaattgcacttttggccccctatgtttcaagaagttgcgattttggccccctaactaa 28574559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 6499786 - 6499836
Alignment:
Q  314 aagttgcgattttggtcccctaactaaaataattcgattttggccccctat 364  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  6499786 aagttgcgattttggtcccctaactaaaataattcgattttgatcccctat 6499836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 273 - 326
Target Start/End: Complemental strand, 9070189 - 9070136
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgatttt 326  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  9070189 aaaaaaggcttaatagcatttttggccccctatgtttcaagaagttgcgatttt 9070136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 11623159 - 11623220
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| ||||||||  ||||||||||||||||||||||||||| |||||||||||    
T  11623159 ggcttaattgcacttttggccctctatgtttcaagaagttgcgattttggccccctaactaa 11623220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 340
Target Start/End: Complemental strand, 12730652 - 12730588
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||||| ||| |||||||||||||| |||  | |||||||||||||||||||||||||||    
T  12730652 ataggcttaattgcacttttggcctcctatcttttcaaaagttgcgattttggtcccctaactaa 12730588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 12798726 - 12798774
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgatttt 326  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  12798726 aggcttaatagcagttttggccccctatatttcaagaagttgcgatttt 12798774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 22515967 - 22516034
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||| |||||||||  || |||||| | |||||||||||||||||||||||||||| |||||||||||    
T  22515967 aaaaaaggcttaattacacttttggtcccctatgtttcaagaagttgcgattttggacccctaactaa 22516034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 12203895 - 12203953
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||||  |||||||||||    
T  12203895 ttaattgcacttttggccccctatgtttcaagaagttgcgattttgaccccctaactaa 12203953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 30369784 - 30369841
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||||    
T  30369784 ggcttaatagcagttttggccccttatgttttaagaagttgcgatttt-gtcccctaac 30369841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 10582206 - 10582150
Alignment:
Q  284 aatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    |||||||||||| ||| ||||| |||||||||||||||||||||| ||||||||||||    
T  10582206 aatagcagttttcgcc-cctatatttcaagaagttgcgattttggccccctaactaaa 10582150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 12799108 - 12799048
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||| |||||||||||||| |||  |||| |||||||||||||||||||||||| ||||||    
T  12799108 taggtttaatagcagttttagccctctatatttcaagaagttgcgattttggtcacctaac 12799048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 2018629 - 2018574
Alignment:
Q  281 cttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    |||||| ||| |||||||| | |||||||||||||||||||||||||| |||||||    
T  2018629 cttaattgcacttttggccccttatgtttcaagaagttgcgattttggccccctaa 2018574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 340
Target Start/End: Complemental strand, 4793892 - 4793829
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||| ||| |||| |||  |||||||||||| |||||||||||||| |||||||||||    
T  4793892 taggcttaattgcattttttgcccactatgtttcaagcagttgcgattttggacccctaactaa 4793829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 2017171 - 2017233
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||| | |||| |||||||||||||| |||||||| |||||||||||    
T  2017171 aggcttaattgcatttttggtcccctaagtttcaagaagttgtgattttggacccctaactaa 2017233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 7504933 - 7504887
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttgg 328  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||    
T  7504933 ttaatagcagttttggccccctatatttcaagaagttgcaattttgg 7504887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 2173934 - 2173885
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttg 327  Q
    ||||||||| ||| |||||||| ||||||||||||||||| |||||||||    
T  2173934 aggcttaattgcacttttggccccctatgtttcaagaagtagcgattttg 2173885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 22517547 - 22517486
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||| | |||||||||||||||||| ||||||||  |||||||||||    
T  22517547 ggcttaattgcacttttggtcccctatgtttcaagaagttacgattttgaccccctaactaa 22517486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 24119492 - 24119553
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||||||||| |||  | ||||||||||||||| |||||||||||    
T  24119492 ggcttaattgcacttttggcctcctattttttcaaaagttgcgattttggccccctaactaa 24119553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 340
Target Start/End: Original strand, 29873065 - 29873104
Alignment:
Q  300 tcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  29873065 tcctatgtttcaagaagttgcgattttgg-cccctaactaa 29873104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 29874495 - 29874456
Alignment:
Q  301 cctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  29874495 cctatgtttcaagaagttgcgatttttgacccctaactaa 29874456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 238928 - 238978
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttg 327  Q
    ||||||||||||||||||| ||| ||||  ||||| |||||||||||||||    
T  238928 taggcttaatagcagttttcgccccctaattttcacgaagttgcgattttg 238978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 4037037 - 4037099
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||||| ||||| |||  | ||||||||||||||| |||||||||||    
T  4037037 aggcttaattgcacttttggccccctatcttttcaaaagttgcgattttggccccctaactaa 4037099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 4806506 - 4806464
Alignment:
Q  229 tcttaaagagtgtcccgg-ggcactcgttaacatttccctaat 270  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  4806506 tcttaaagagtgtcccggaggaactcgttaacatttccctaat 4806464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 11624362 - 11624304
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaac 337  Q
    |||||||| ||| ||||| || |||||||||||||||||||| ||||||  ||||||||    
T  11624362 ggcttaattgcaattttgaccccctatgtttcaagaagttgcaattttgaacccctaac 11624304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 12766529 - 12766471
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||||||||  || ||||  ||||| |||||||||||||||| |||||||    
T  12766529 aggcttaatagcagttttcaccccctaactttcacgaagttgcgattttggccccctaa 12766471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 16442159 - 16442217
Alignment:
Q  205 tcataaaaatttactatttaaatgtcttaaagagtgtcccggggcactcgttaacattt 263  Q
    ||||| ||| ||||||| |||| |||||||||||||  ||||| |||||||||||||||    
T  16442159 tcatacaaagttactatataaaggtcttaaagagtgctccgggacactcgttaacattt 16442217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 33265089 - 33265147
Alignment:
Q  282 ttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||| ||| |||||||| ||||| |||| | |||||||||||||||||| ||||||||    
T  33265089 ttaattgcacttttggccccctatctttctaaaagttgcgattttggtcctctaactaa 33265147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 2538983 - 2539031
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttg 327  Q
    |||||||||| |||||||| | ||||||||| || ||||||||||||||    
T  2538983 ggcttaatagtagttttggtcccctatgttttaaaaagttgcgattttg 2539031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 5446659 - 5446627
Alignment:
Q  235 agagtgtcccggggcactcgttaacatttccct 267  Q
    ||||||||| |||||||||||||||||||||||    
T  5446659 agagtgtccgggggcactcgttaacatttccct 5446627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 6048297 - 6048237
Alignment:
Q  205 tcataaaaatttactatttaaatgtcttaaagagtgtcccgggg-cactcgttaacatttc 264  Q
    ||||| ||| ||||||| |||| ||||||||| ||| ||||||| ||||||||||||||||    
T  6048297 tcatacaaagttactatataaaggtcttaaagtgtgccccggggacactcgttaacatttc 6048237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 7465574 - 7465618
Alignment:
Q  223 taaatgtcttaaagagtgtcccgg-ggcactcgttaacatttccc 266  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||    
T  7465574 taaaggtcttaaagagtgtcccggagacactcgttaacatttccc 7465618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 13070532 - 13070473
Alignment:
Q  205 tcataaaaatttactatttaaatgtcttaaagagtgtcccgg-ggcactcgttaacatttc 264  Q
    ||||||| | |||||||||| | ||||||||||||||| ||| ||||||||||||||||||    
T  13070532 tcataaatagttactatttata-gtcttaaagagtgtctcggaggcactcgttaacatttc 13070473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 10351 - 10413
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||||||||||||||||||||||||| ||||| |||| ||||||| ||||||||||||    
T  10351 ggcttaatagcagttttggcctcctatgttttaagaaattgcaattttggccccctaactaaa 10413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 3440 - 3380
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||||    
T  3440 gcttaattgcacttttggcctcctatgttttaagaagttgcgattttggccccctaactaa 3380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 1844 - 1904
Alignment:
Q  280 gcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||||  ||||||||||    
T  1844 gcttaattgcatttttggcctcctatgtttcaagaagttgagattttggatccctaactaa 1904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 27983 - 27911
Alignment:
Q  289 cagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaaataattcgattttggccccc 361  Q
    |||||||| || | |||||||  ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  27983 cagttttgaccccatatgtttacagaagttgcgattttggacccctaactaaaataattcgattatggccccc 27911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 6747 - 6692
Alignment:
Q  277 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtccc 332  Q
    ||||||||||||||||||| ||| |||| ||||||| ||||||||||||| |||||    
T  6747 taggcttaatagcagttttagccccctaagtttcaacaagttgcgattttagtccc 6692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 22788 - 22851
Alignment:
Q  278 aggcttaatagcagttttgg-cctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||| || |||||||||| ||||||||||||||||| |||||||||||    
T  22788 aggcttaattgcacttttggtccccctatgtttctagaagttgcgattttggacccctaactaa 22851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 326
Target Start/End: Original strand, 199655 - 199713
Alignment:
Q  268 aatataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgatttt 326  Q
    |||| ||| |||||||||| ||| |||||||| |||||||||||||||||| |||||||    
T  199655 aataaaaattaggcttaattgcacttttggccccctatgtttcaagaagttacgatttt 199713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 20107 - 20156
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttg 327  Q
    ||||||||| ||| |||||||| ||||||||||||||||| |||||||||    
T  20107 aggcttaattgcacttttggccccctatgtttcaagaagtagcgattttg 20156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 9654 - 9594
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||| ||||||||||||||  |||||||  ||||| ||||||||||||||| ||||||||    
T  9654 ataggtttaatagcagttttcacctcctaactttcacgaagttgcgattttgatcccctaa 9594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1458 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 1465 - 1528
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||||||||||||| ||| ||||  |||||  |||||| |||||||| |||||||    
T  1465 aaaataggcttaatagcagttttagccccctaactttcacaaagttgagattttggccccctaa 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 3633 - 3696
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||||||||||||| ||| ||||  ||||   ||||||||||||||| |||||||    
T  3633 aaaataggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaa 3696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 3633 - 3696
Alignment:
Q  273 aaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
    ||||||||||||||||||||||| ||| ||||  ||||   ||||||||||||||| |||||||    
T  3633 aaaataggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaa 3696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 341
Target Start/End: Original strand, 21165 - 21227
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaaa 341  Q
    ||||||||| ||||||||| || ||||||||||||||| |||  ||||||||| ||||||||||    
T  21165 aggcttaattgcagttttgacc-cctatgtttcaagaaattgtaattttggtctcctaactaaa 21227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1301 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1301
Description:

Target: scaffold1301; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 1362 - 1300
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||||| | ||| |||| | ||||||||||||||| |||||||||||    
T  1362 aggcttaattgcacttttggccccttatctttccaaaagttgcgattttggccccctaactaa 1300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 32324 - 32262
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| | | |||||||| ||||| |||| | ||||||||||||||| |||||||||||    
T  32324 aggcttaattgtacttttggccccctatctttccaaaagttgcgattttggccccctaactaa 32262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 31979 - 32040
Alignment:
Q  279 ggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||| ||| |||||||| ||||| |||| | ||||||| ||||||| |||||||||||    
T  31979 ggcttaattgcacttttggccccctatctttccaaaagttgcaattttggccccctaactaa 32040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Complemental strand, 122644 - 122582
Alignment:
Q  278 aggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    ||||||||| ||| |||||||| ||||| |||| | ||||||||||||||| | |||||||||    
T  122644 aggcttaattgcacttttggccccctatctttccaaaagttgcgattttggcctcctaactaa 122582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 18411 - 18452
Alignment:
Q  148 tttaagcattctgattcaaaaaattatccactaaaaagtcaa 189  Q
    |||||||||||| |||||| |||||||||| |||||||||||    
T  18411 tttaagcattctaattcaagaaattatccattaaaaagtcaa 18452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 81623 - 81554
Alignment:
Q  271 ataaaataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaactaa 340  Q
    |||||||||||||||| ||| |||||| | ||||| |||| | |||||||| || ||| |||||||||||    
T  81623 ataaaataggcttaattgcacttttggacccctatctttccaaaagttgcggttatggacccctaactaa 81554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 405510 - 405451
Alignment:
Q  276 ataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggtcccctaa 336  Q
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T  405510 ataggcttaatagcagttttaac-tcccaagtttcaagaagttgcgattttgaccccctaa 405451  T

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