View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11801_high_14 (Length: 238)
Name: NF11801_high_14
Description: NF11801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11801_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 12285966 - 12285745
Alignment:
| Q |
1 |
tctatggtttaatgtatcattctcacacatgctacctttatttttaaaactctatattcggtttaaagatcgactaacctagttgaccaatacaaccgtc |
100 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |
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| T |
12285966 |
tctatggtttaatgtatcattctcacacatgcgacctttatttttaaaactctatattcggtttaaagatcaactaacctaattgaccaatacaaccgtc |
12285867 |
T |
|
| Q |
101 |
cactagacacaaccttagatcgcataatgtttggcatatggcaacaactcaacaatcttcggagcgtaacatatggattttcattcaagctgtgttgtgt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12285866 |
cactagacacaaccttagatcgcataatgtttggcatatggcaacaactcaacaatcttcggagcgtaacatatggattttcattcaagctgtgttgtgt |
12285767 |
T |
|
| Q |
201 |
ctggaaattgtcttgtacctaa |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
12285766 |
ctggaaattgtcttgtacctaa |
12285745 |
T |
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