View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11803_high_2 (Length: 317)
Name: NF11803_high_2
Description: NF11803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11803_high_2 |
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Alignment Details
Target: chr5 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 30623311 - 30623591
Alignment:
| Q |
17 |
accaccaagacccatcccttcaaaaatctgatgaaaagccaaagcagcaactaaaggccttatagtacaaacattttgagacatacccatagtcacacca |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30623311 |
accaccaagacccatcccttcaaaaatctgatgaaaagccaaagcagcaactaaaggccttatagtacaaacattttgagacatacccatagtcacacca |
30623410 |
T |
|
| Q |
117 |
attataactgaatgaaatattatcccaatctccaatacttgtgaaaccaatctttgtttcaatttaattaactcttcccctctttcacaatctccttcac |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30623411 |
attataactgaatgaaatattatcccaatctccaatacttgtgaaaccaatctttgtttcaatttaattaactcttcccctctttcacaatctccttcac |
30623510 |
T |
|
| Q |
217 |
caccttccaactccatctctttctcacccaccggcgcatactgtccgtgctccacgtgggaactcgctacgaggtccacga |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30623511 |
caccttccaactccatctctttctcacccaccggcgcatactgtccgtgctccacgtgggaactcgctacgaggtccacga |
30623591 |
T |
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