View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11803_low_5 (Length: 226)

Name: NF11803_low_5
Description: NF11803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11803_low_5
NF11803_low_5
[»] chr4 (34 HSPs)
chr4 (1-226)||(35370582-35370807)
chr4 (1-226)||(35369685-35369909)
chr4 (1-226)||(33989561-33989785)
chr4 (1-226)||(22882998-22883222)
chr4 (1-226)||(22934662-22934886)
chr4 (1-226)||(6655654-6655880)
chr4 (1-226)||(26363963-26364189)
chr4 (1-226)||(41964115-41964339)
chr4 (1-225)||(3785790-3786013)
chr4 (1-226)||(8665105-8665331)
chr4 (1-226)||(54882718-54882944)
chr4 (1-226)||(35662140-35662364)
chr4 (1-226)||(46703199-46703423)
chr4 (1-226)||(379077-379302)
chr4 (64-226)||(33089597-33089759)
chr4 (3-226)||(55085611-55085836)
chr4 (1-224)||(50674090-50674314)
chr4 (1-226)||(12073091-12073316)
chr4 (144-226)||(10071583-10071664)
chr4 (136-226)||(27417332-27417421)
chr4 (141-226)||(8653298-8653382)
chr4 (35-226)||(40630682-40630873)
chr4 (144-226)||(10071969-10072050)
chr4 (104-226)||(38811428-38811548)
chr4 (1-222)||(50262942-50263164)
chr4 (124-226)||(2209406-2209508)
chr4 (1-201)||(8647861-8648062)
chr4 (144-226)||(46569935-46570016)
chr4 (1-221)||(41961110-41961334)
chr4 (141-222)||(47514887-47514967)
chr4 (133-221)||(6719289-6719376)
chr4 (109-226)||(26699799-26699917)
chr4 (169-225)||(32091270-32091326)
chr4 (67-198)||(25723528-25723658)
[»] chr5 (16 HSPs)
chr5 (1-226)||(316464-316686)
chr5 (1-226)||(35615870-35616093)
chr5 (15-219)||(33906288-33906491)
chr5 (1-226)||(40146959-40147185)
chr5 (14-226)||(213166-213380)
chr5 (1-226)||(27015230-27015456)
chr5 (1-226)||(38746703-38746929)
chr5 (1-226)||(5057746-5057971)
chr5 (1-226)||(28278013-28278240)
chr5 (1-218)||(14689655-14689869)
chr5 (124-226)||(16642247-16642346)
chr5 (1-226)||(4160333-4160556)
chr5 (126-225)||(10055077-10055175)
chr5 (141-226)||(27638001-27638084)
chr5 (104-217)||(30802649-30802760)
chr5 (162-226)||(30792939-30793002)
[»] chr1 (27 HSPs)
chr1 (1-226)||(41135519-41135743)
chr1 (1-223)||(37033317-37033540)
chr1 (1-226)||(42298219-42298445)
chr1 (1-226)||(28242087-28242312)
chr1 (1-226)||(47114870-47115095)
chr1 (1-226)||(11348396-11348622)
chr1 (1-226)||(37167995-37168221)
chr1 (1-226)||(7482476-7482701)
chr1 (35-224)||(9109680-9109869)
chr1 (1-226)||(29135946-29136171)
chr1 (1-226)||(34603274-34603499)
chr1 (1-226)||(193310-193535)
chr1 (1-226)||(13547333-13547559)
chr1 (1-226)||(13549244-13549470)
chr1 (1-148)||(12318726-12318873)
chr1 (1-226)||(34602584-34602809)
chr1 (141-226)||(47255720-47255804)
chr1 (1-226)||(37879155-37879381)
chr1 (131-220)||(22079039-22079127)
chr1 (57-226)||(19754189-19754358)
chr1 (162-226)||(6808145-6808210)
chr1 (170-226)||(31928222-31928278)
chr1 (124-226)||(19752384-19752485)
chr1 (109-222)||(16216847-16216959)
chr1 (14-101)||(22079145-22079232)
chr1 (134-183)||(3331285-3331333)
chr1 (1-80)||(31925950-31926030)
[»] chr2 (11 HSPs)
chr2 (1-226)||(45726628-45726853)
chr2 (57-226)||(42261911-42262079)
chr2 (1-226)||(42288354-42288579)
chr2 (1-226)||(1631976-1632202)
chr2 (2-226)||(17450289-17450513)
chr2 (1-226)||(35447128-35447354)
chr2 (124-226)||(24397755-24397857)
chr2 (124-226)||(33647867-33647969)
chr2 (57-226)||(30218335-30218503)
chr2 (145-226)||(7450999-7451078)
chr2 (124-180)||(24197643-24197698)
[»] chr7 (21 HSPs)
chr7 (1-226)||(4512634-4512859)
chr7 (1-226)||(29608439-29608660)
chr7 (1-226)||(6431669-6431895)
chr7 (1-226)||(34310960-34311186)
chr7 (8-224)||(5116335-5116551)
chr7 (1-226)||(2389980-2390206)
chr7 (3-226)||(3258694-3258916)
chr7 (1-226)||(6360156-6360382)
chr7 (124-226)||(32358204-32358306)
chr7 (1-226)||(2361215-2361441)
chr7 (1-226)||(22269673-22269897)
chr7 (1-226)||(4508950-4509167)
chr7 (1-226)||(4510792-4511009)
chr7 (174-226)||(48599742-48599794)
chr7 (1-226)||(22328643-22328869)
chr7 (9-183)||(43363667-43363839)
chr7 (1-87)||(48599578-48599666)
chr7 (185-226)||(30814463-30814504)
chr7 (109-216)||(22552792-22552897)
chr7 (6-146)||(8359567-8359708)
chr7 (156-194)||(37545306-37545344)
[»] chr8 (16 HSPs)
chr8 (1-226)||(42435235-42435461)
chr8 (1-226)||(11383684-11383910)
chr8 (1-226)||(40328477-40328703)
chr8 (1-226)||(40585423-40585648)
chr8 (131-226)||(2999896-2999990)
chr8 (143-226)||(22976232-22976314)
chr8 (1-226)||(44353493-44353716)
chr8 (141-226)||(4283244-4283328)
chr8 (1-225)||(40221444-40221669)
chr8 (1-111)||(33655549-33655659)
chr8 (19-222)||(3846082-3846283)
chr8 (162-226)||(20686463-20686526)
chr8 (124-226)||(40535551-40535650)
chr8 (1-80)||(4283368-4283448)
chr8 (134-214)||(10020150-10020229)
chr8 (108-180)||(10101512-10101583)
[»] chr3 (23 HSPs)
chr3 (1-226)||(34490911-34491137)
chr3 (1-226)||(34795568-34795792)
chr3 (1-226)||(6095843-6096069)
chr3 (1-226)||(41819768-41819991)
chr3 (64-226)||(26323821-26323982)
chr3 (1-226)||(46860169-46860396)
chr3 (1-226)||(49199714-49199941)
chr3 (1-226)||(40913036-40913263)
chr3 (1-226)||(43402034-43402260)
chr3 (9-226)||(54593403-54593621)
chr3 (1-226)||(36018549-36018775)
chr3 (1-226)||(43403977-43404203)
chr3 (1-226)||(55302209-55302435)
chr3 (1-226)||(47303950-47304175)
chr3 (1-226)||(4569649-4569875)
chr3 (124-226)||(30235823-30235925)
chr3 (141-226)||(28074315-28074399)
chr3 (35-226)||(35138985-35139183)
chr3 (1-222)||(1683190-1683411)
chr3 (66-201)||(39127282-39127416)
chr3 (35-226)||(5434156-5434348)
chr3 (1-119)||(20937462-20937580)
chr3 (141-183)||(31340462-31340503)
[»] scaffold0002 (1 HSPs)
scaffold0002 (57-226)||(490746-490914)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-226)||(7026-7252)
[»] chr6 (11 HSPs)
chr6 (1-226)||(603324-603550)
chr6 (1-226)||(21593364-21593588)
chr6 (1-226)||(5043326-5043551)
chr6 (1-226)||(2973183-2973409)
chr6 (4-226)||(3808955-3809179)
chr6 (78-226)||(25072884-25073030)
chr6 (1-226)||(17762685-17762913)
chr6 (141-226)||(26800469-26800553)
chr6 (150-226)||(22425222-22425297)
chr6 (1-226)||(26830368-26830594)
chr6 (11-217)||(17757789-17757998)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-226)||(11256-11482)
[»] scaffold0014 (1 HSPs)
scaffold0014 (4-226)||(80530-80753)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-226)||(18245-18471)
[»] scaffold0197 (1 HSPs)
scaffold0197 (21-226)||(1671-1875)


Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 35370582 - 35370807
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    ||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  35370582 aagagaaccaaccattagcctttgatttcccaaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatgttttt 35370681  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcac 200  Q
     | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  35370682 atcaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctctc 35370781  T
Q  201 ccgaagaccctcaacctttagtatct 226  Q
    || |||||||||||||||||||||||    
T  35370782 ccaaagaccctcaacctttagtatct 35370807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 35369685 - 35369909
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    |||||||||||| |||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| |||||    
T  35369685 aagagaaccaacccttagcctttgatt-cccaaagatcttctattttgctatccatagactcacccaagttgcttacaaagactatcttttgatgtgttt 35369783  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35369784 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaatctttgaacctcac 35369883  T
Q  201 ccgaagaccctcaacctttagtatct 226  Q
    || |||||||||||||||||||||||    
T  35369884 ccaaagaccctcaacctttagtatct 35369909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 33989785 - 33989561
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtt 99  Q
    |||||||| ||  |||||||||||||| ||  | |||||||| ||||||| || | |||||||||||||||||| ||||| ||||||||  | || ||||    
T  33989785 aagagaacaaatccttagcctttgattacctaaggatcttctcttttggtttcaaaagactcacccaagttgctcacaaatgactctccactcatgtgtt 33989686  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctca 199  Q
    ||  || | |||||||||||  | |||||| ||||||| |||||||||| |||||| |||| |||||| ||||||||||||||| |||||||||||||||    
T  33989685 tcccaatcccatgaatctctccc-aaaaggcaccaaccttctcccaagagccccctatttt-ggttcttcaagattcacatcttgaagctttgaacctca 33989588  T
Q  200 cccgaagaccctcaacctttagtatct 226  Q
    ||| ||||||||||| |||||||||||    
T  33989587 cccaaagaccctcaaactttagtatct 33989561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 22882998 - 22883222
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    ||||||||||||  ||| |||||||||| |  | |||||||| ||||||| |||  |||||| ||||| ||||| |||||||||||| |||||| |||||    
T  22882998 aagagaaccaaccattatcctttgattttctaaggatcttctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgttt 22883097  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcac 200  Q
    |  ||||  |||| ||||| || |||||| | || ||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  22883098 cctaaccctatgagtctctctccaaaaggtatcagccctctcccaagagccccctctttt-tgttctccaagattcacatcttgaagctttgaacctcac 22883196  T
Q  201 ccgaagaccctcaacctttagtatct 226  Q
     | || |  |||||||||||||||||    
T  22883197 tcaaatagtctcaacctttagtatct 22883222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 22934662 - 22934886
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    ||||||||||||  ||| |||||||||| |  | |||||||| ||||||| |||  |||||| ||||| ||||| |||||||||||| |||||| |||||    
T  22934662 aagagaaccaaccattatcctttgattttctaaggatcttctcttttggtctcctaagactcgcccaaattgctcacaaagactctcatttgatgtgttt 22934761  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcac 200  Q
    |  ||||  |||| ||||| || |||||| | || ||||||||||||| |||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  22934762 cctaaccctatgagtctctctccaaaaggtatcagccctctcccaagagccccctctttt-tgttctccaagattcacatcttgaagctttgaacctcac 22934860  T
Q  201 ccgaagaccctcaacctttagtatct 226  Q
     | || |  |||||||||||||||||    
T  22934861 tcaaatagtctcaacctttagtatct 22934886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 6655880 - 6655654
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaa-gatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    ||||||| ||||  ||||||||||||||  | || |||||||| ||||||| ||   |||||||||||||||||| | ||| ||||||||  | || |||    
T  6655880 aagagaaacaacctttagcctttgattttactaatgatcttctcttttggtttcacaagactcacccaagttgctcagaaatgactctccactcatgtgt 6655781  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctccc-aagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| | || |||||| ||||||||| |||| |||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  6655780 ttcccaaccccatgaatct-tctccaaaaggcaccaaccctttccccaagagccccctctttt-ggttctccaagattcacatcttaaagttttgaacct 6655683  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  6655682 cacccaaagaccctcaacctttagtatct 6655654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 26364189 - 26363963
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||| ||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  26364189 aagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgt 26364090  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| | || ||||||  |||||||| | | ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  26364089 ttcccaaccccatgaatct-tctccaaaaggccccaacccttttcacaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 26363992  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||| |||||||||||||||||||    
T  26363991 cacccaaaggccctcaacctttagtatct 26363963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 41964339 - 41964115
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| |||||||   | || |||    
T  41964339 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctctactcatgtgt 41964240  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| || | |||||  || |||||| | ||||||| ||||||||||| |||||||||||||||||||| | |||||||||||||    
T  41964239 ttcccaaccccatgaatct-ttcccaaaag--actaacccttttcccaagagccccctctttt-ggttctccaagattcacatcatgaagctttgaacct 41964144  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  41964143 cacccaaagaccctcaacctttagtatct 41964115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 3786013 - 3785790
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    ||||||||||||||||||||||||||||||  | ||| |||| ||||||| |||  |||||| | ||| ||||| ||||||||||||||||||  ||||     
T  3786013 aagagaaccaactcttagcctttgatttcctaaggatattctcttttggtctcccaagactcgcacaatttgctcacaaagactctcctttgaagtgttc 3785914  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcac 200  Q
    ||  ||| ||| | |||||    |||||| ||||||||| | |||||| ||||||||||| |||||| ||||||||||||||| |||||||||| ||| |    
T  3785913 ctcgaccccataattctctcctcaaaaggcaccaacccttttccaagagccccctctttt-ggttcttcaagattcacatcttgaagctttgaatctcgc 3785815  T
Q  201 ccgaagaccctcaacctttagtatc 225  Q
    |  ||||| ||||||||||||||||    
T  3785814 ctaaagactctcaacctttagtatc 3785790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 8665331 - 8665105
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||| ||||||| | || ||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  |  | |||    
T  8665331 aagaaaaccaacacataacctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcctgtgt 8665232  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | |||||| ||||||||| | ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  8665231 ttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 8665134  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  8665133 cacccaaagaccctcaacctttagtatct 8665105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 54882944 - 54882718
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   ||||||||||||||| || ||||| |||||| |  | || |||    
T  54882944 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacgagactcacccaagtttctcacaaaagactctacactcatgtgt 54882845  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctccc-aagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| | || |||||| ||||||||| | |  |||| ||||||||||| ||||||||||||||||||| || |||||||||||||    
T  54882844 ttcccaaccccatgaatct-tctccaaaaggcaccaacccttttcataagagccccctctttt-ggttctccaagattcacattttgaagctttgaacct 54882747  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  54882746 cacccaaagaccctcaacctttagtatct 54882718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 35662364 - 35662140
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaaga-ctctcctttgatatgtt 99  Q
    |||||||||||| |||||| ||||||||||  | |||||||| ||||||| ||   |||||||||||||||||| ||||||| |||||| || || ||||    
T  35662364 aagagaaccaacccttagc-tttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaagaactctccattcatgtgtt 35662266  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctctccc-aagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    |   |||| ||||||||| |  | |||||| ||||||||| | || |||| ||||||||||| ||||||||||||||||||| || ||||||||||||||    
T  35662265 ttccaaccccatgaatct-tccccaaaaggcaccaacccttttcctaagagccccctctttt-ggttctccaagattcacatattgaagctttgaacctc 35662168  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| ||||| |||||||||||||||||    
T  35662167 acccaaagactctcaacctttagtatct 35662140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 46703423 - 46703199
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtt 99  Q
    ||||||||||||| ||||||||||||||||  | ||| |||| ||||||| ||   |||||||||||||||||| ||||| |||||||| || || | ||    
T  46703423 aagagaaccaacttttagcctttgatttcctaaggattttctcttttggtttcacaagactcacccaagttgctgacaaaagactctccattcatgt-tt 46703325  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    ||  | || ||||||||| |  | |||||| ||||||||| | ||||||| ||||||||||| | ||||| |||||||||||||| ||||||||||||||    
T  46703324 tcccatccccatgaatct-tccccaaaaggcaccaacccttttcccaagagccccctctttt-gattctcgaagattcacatcttgaagctttgaacctc 46703227  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| |||||||||||||||||||||||    
T  46703226 acccaaagaccctcaacctttagtatct 46703199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 379302 - 379077
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtt 99  Q
    |||||||||||| |||||||||||||||||  | |||||||| ||||| | ||   |||||||||||||||||| ||||| ||||||||  | || ||||    
T  379302 aagagaaccaacccttagcctttgatttcctaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtt 379203  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    ||  |  ||||||||||| |  | |||||| ||| ||||| | | ||||| ||||||||||| |||||||||||||||||||| | ||||||||||||||    
T  379202 tcccattctcatgaatct-tccccaaaaggcaccgacccttttcacaagagccccctctttt-ggttctccaagattcacatcatgaagctttgaacctc 379105  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| ||| |||||||||||||||||||    
T  379104 acccaaagtccctcaacctttagtatct 379077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 33089759 - 33089597
Alignment:
Q  64 cccaagttgcttacaaa-gactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttag 162  Q
    ||||||||||| ||||| ||||||||  | || ||||| |  ||| ||||||||||| || |||||  |||||||||||||||||| ||||||||||| |    
T  33089759 cccaagttgctcacaaatgactctccactcatgtgtttttcgaccccatgaatctctctccaaaagacaccaaccctctcccaagagccccctctttt-g 33089661  T
Q  163 gttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
     |||||||||||||||||||| || ||||||||||||||| ||||||||||| |||||||||||    
T  33089660 attctccaagattcacatcttcaaactttgaacctcacccaaagaccctcaatctttagtatct 33089597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 55085611 - 55085836
Alignment:
Q  3 gagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgttt 100  Q
    ||||| |||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||| ||||||||| ||||| ||||||||  | || |||||    
T  55085611 gagaatcaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacacaagttgctcacaaatgactctccactcatgtgttt 55085710  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctccc-aagaaccccctcttttaggttctccaagattcacatctt-aaagctttgaacctc 198  Q
    |  |||| ||||||||| |  | |||||| ||||||||| |||| |||| ||||||||||| |||||||||||||| ||||||| |||||||| ||||||    
T  55085711 cccaaccccatgaatct-tccccaaaaggcaccaaccctttccccaagagccccctctttt-ggttctccaagatttacatcttgaaagcttttaacctc 55085808  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| |||||||||||||||||||||||    
T  55085809 acccaaagaccctcaacctttagtatct 55085836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 50674090 - 50674314
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  50674090 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgt 50674189  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctccca-agaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| || | | |||| ||||||||| | |   ||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  50674190 ttcccaaccccatgaatct-ttcccataaggcaccaacccttttcattagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 50674287  T
Q  198 cacccgaagaccctcaacctttagtat 224  Q
    ||||| |||||||| ||| ||||||||    
T  50674288 cacccaaagacccttaacatttagtat 50674314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 12073316 - 12073091
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||| ||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| |||||| |  | || |||    
T  12073316 aagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcataagactcacccaagttgctcacaaaagactcttcactcatgtgt 12073217  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct--cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacc 196  Q
    ||   |||| |||||||||  | | |||||| ||||||||| |  ||||||| |||| |||||| |||||||||||||| ||||||| ||||||||||||    
T  12073216 tttccaaccccatgaatct--tcccaaaaggcaccaaccctttttcccaagagcccc-tctttt-ggttctccaagatttacatcttgaagctttgaacc 12073121  T
Q  197 tcacccgaagaccctcaacctttagtatct 226  Q
    |||||| |||||||||||||||||||||||    
T  12073120 tcacccaaagaccctcaacctttagtatct 12073091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 10071664 - 10071583
Alignment:
Q  144 caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10071664 caagagccccctctttt-ggttctccaagattcacatcttaaagctttgaacctcacccaaagaccctcaacctttagtatct 10071583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 27417332 - 27417421
Alignment:
Q  136 ccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||| |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27417332 ccctttcccaagagccccttctttt-ggttctccaagattcacatcttaaagctttgaacctcacccaaagaccctcaacctttagtatct 27417421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 8653382 - 8653298
Alignment:
Q  141 tcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  8653382 tcccaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatct 8653298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 40630873 - 40630682
Alignment:
Q  35 gatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggacc 133  Q
    |||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || ||||||  |||| ||||||||| |  | |||||| |||    
T  40630873 gatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcacc 40630775  T
Q  134 aaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||| | | ||| | | ||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  40630774 aacccttttcacaaaagctccctctttt-ggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatct 40630682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 10072050 - 10071969
Alignment:
Q  144 caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  10072050 caagagccccctcttttag-ttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatct 10071969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 226
Target Start/End: Original strand, 38811428 - 38811548
Alignment:
Q  104 aacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccg 203  Q
    ||||||||||||||||    |||||  ||||||||| |||||||| |||| |||||  |||||||||||||||||||||||||||||||||||||||||     
T  38811428 aacctcatgaatctctccgcaaaagacaccaaccctttcccaagagcccc-tctttg-ggttctccaagattcacatcttaaagctttgaacctcaccca 38811525  T
Q  204 aagaccctcaacctttagtatct 226  Q
    || ||||||||||||||||||||    
T  38811526 aataccctcaacctttagtatct 38811548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 50262942 - 50263164
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaaga-tcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    ||||||||||||  ||||||||||||||| | |||  |||||| ||||||| ||   ||| ||||| | |||||| ||||| ||||||||  | || |||    
T  50262942 aagagaaccaaccattagcctttgatttcactaagggtcttctcttttggtttcacaagagtcaccgaggttgctcacaaaagactctccactcatgtgt 50263041  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctc-ccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | |||||| ||||||||| |  |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  50263042 ttcccaaccccatgaatct-tccccaaaaggcaccaaccctttttccaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 50263139  T
Q  198 cacccgaagaccctcaacctttagt 222  Q
    ||||| ||||| |||||||||||||    
T  50263140 cacccaaagactctcaacctttagt 50263164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 2209508 - 2209406
Alignment:
Q  124 aaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagt 222  Q
    |||||| ||||||||| | |||||||  |||||| ||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  2209508 aaaaggcaccaacccttttcccaagagtcccctcgttt-ggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaatctttagt 2209410  T
Q  223 atct 226  Q
    ||||    
T  2209409 atct 2209406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 8648062 - 8647861
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| | || | ||||||||| | ||| ||||||| ||||| | ||   |||||||||||||||||| ||||| ||||||||  |  | |||    
T  8648062 aagagaaccaacacataacatttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaaagactctccactcctgtgt 8647963  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | |||||| ||||||||| | ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  8647962 ttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 8647865  T
Q  198 cacc 201  Q
    ||||    
T  8647864 cacc 8647861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 46569935 - 46570016
Alignment:
Q  144 caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||  |||||| ||||| ||||||||||    
T  46569935 caagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacctcacctaaagaccttcaacatttagtatct 46570016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 41961334 - 41961110
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaa-----gttgcttacaaagactctcctttgata 95  Q
    |||||||||||| |||||| ||||||||||  | ||| |||| ||||||| |||  ||||||||||||     |||||| ||| |||||||||||| ||     
T  41961334 aagagaaccaacccttagcttttgatttcctaaggatattcttttttggtctcccaagactcacccaagttacgttgctcacatagactctcctttaatg 41961235  T
Q  96 tgtttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaac 195  Q
    ||||||  |||| |||||||||||  | |||| | ||| ||| |||||| ||| |||||| |||| |||||| |||||||||||| |  |  |||||||     
T  41961234 tgtttcccaacc-catgaatctctccccaaaaagcaccgaccttctccctagagccccct-ttttcggttctacaagattcacatttggacactttgaat 41961137  T
Q  196 ctca-cccgaagaccctcaacctttag 221  Q
    |||| ||| |||||||||| |||||||    
T  41961136 ctcaccccaaagaccctcaccctttag 41961110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 47514887 - 47514967
Alignment:
Q  141 tcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagt 222  Q
    ||||||||  || ||||||| ||||| |||||||||| ||||| ||||||||||| ||||||||||||| ||||||||||||    
T  47514887 tcccaagagtccactctttt-ggttcaccaagattcatatcttgaagctttgaacttcacccgaagaccttcaacctttagt 47514967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 221
Target Start/End: Complemental strand, 6719376 - 6719289
Alignment:
Q  133 caaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttag 221  Q
    ||||||| ||||||||| || ||||||||| || ||||||||||||||||| || ||||||| ||||||| || ||| |||||||||||    
T  6719376 caaccctttcccaagaatccactcttttagttt-tccaagattcacatcttgaacctttgaatctcaccctaaaaccttcaacctttag 6719289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 26699799 - 26699917
Alignment:
Q  109 catgaatctctttcgaaaagggaccaaccctctc-ccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaaga 207  Q
    ||||||||||||  ||||||| ||||||||| |  |||||| ||||||   || || |||| |||||||||||||| ||| ||||||||||| || ||||    
T  26699799 catgaatctcttctgaaaaggcaccaaccctttttccaagatcccccttcatttggctctctaagattcacatcttgaagttttgaacctcaaccaaaga 26699898  T
Q  208 ccctcaacctttagtatct 226  Q
     | ||||||||||||||||    
T  26699899 tcttcaacctttagtatct 26699917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 32091326 - 32091270
Alignment:
Q  169 caagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatc 225  Q
    ||||||||||||||| ||| |||||||||||| | |||||||||||| |||||||||    
T  32091326 caagattcacatcttgaagttttgaacctcactcaaagaccctcaacatttagtatc 32091270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 25723528 - 25723658
Alignment:
Q  67 aagttgcttacaaagactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttc 166  Q
    |||||| | |||||||||||| |||||| ||||||  |||| || ||| |||| || |||||| |  |||| |   |||||| | ||||||||| |||||    
T  25723528 aagttgttcacaaagactctcttttgatgtgtttcccaaccccacgaagctctctccaaaaggcattaaccattatccaagagctccctctttt-ggttc 25723626  T
Q  167 tccaagattcacatcttaaagctttgaacctc 198  Q
    |||||||||||||| || ||||||||||||||    
T  25723627 tccaagattcacattttgaagctttgaacctc 25723658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 1e-55; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 316686 - 316464
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    |||||||||||| |||||||||||||||||  | ||| |||| ||||||| |||  ||| ||||| |||||||| |||||||||||| |||||| |||||    
T  316686 aagagaaccaacccttagcctttgatttcct-aggattttctcttttggtctcccaagattcacc-aagttgctcacaaagactctcttttgatgtgttt 316589  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcac 200  Q
    |  ||||| ||||||||||  | |||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||    
T  316588 cccaaccttatgaatctctccccaaaaggcaccaaccctctcccaagagccccccctttt-ggttctccaagattcacatcttgaagctttgaacctcac 316490  T
Q  201 ccgaagaccctcaacctttagtatct 226  Q
    || |||||||||||||||||||||||    
T  316489 ccaaagaccctcaacctttagtatct 316464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 35616093 - 35615870
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    ||||||| ||||||| |||||||||||||  || |||||||  ||||||| |||  ||||||||| |||||| ||||||||||||| |||| || |||||    
T  35616093 aagagaatcaactct-agcctttgatttcttgatgatcttcgcttttggtttcccaagactcaccaaagttgattacaaagactcttcttttatgtgttt 35615995  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcac 200  Q
    || |||  |||||||||||  | |||||| | || |||| ||||||||  |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  35615994 ctcaactccatgaatctctccccaaaaggcatcacccctttcccaagagtcccctctttt-ggttctccaagattcacatcttgaagctttgaacctcac 35615896  T
Q  201 ccgaagaccctcaacctttagtatct 226  Q
     | |||||||||||||||||||||||    
T  35615895 tcaaagaccctcaacctttagtatct 35615870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 33906288 - 33906491
Alignment:
Q  15 ttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgtttctaaacctcatgaa 114  Q
    ||||||||||||||||  | |||||||| ||||||| |||  |||||||||||||||||| || ||| |||||||||||| ||||||| |||| ||||||    
T  33906288 ttagcctttgatttcctaaggatcttctcttttggtttcccaagactcacccaagttgctcactaagtctctcctttgatgtgtttctcaaccccatgaa 33906387  T
Q  115 tctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaa 214  Q
    |||||  | |||||| |||||||||||||||||| |||||| |||| |||||| |||||||||||| || | |||| ||||||||| | |||||||||||    
T  33906388 tctctccccaaaaggcaccaaccctctcccaagagccccct-tttttggttctacaagattcacattttgaggcttcgaacctcactcaaagaccctcaa 33906486  T
Q  215 ccttt 219  Q
    |||||    
T  33906487 ccttt 33906491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 40147185 - 40146959
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaa-gatcttctattttggtatccatagactcacccaagttgcttac-aaagactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | || |||||||| ||||||| ||   |||||||||||||||||| || |||||||||||  | || |||    
T  40147185 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgt 40147086  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaacc-ctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | |||||| |||||||  | |||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  40147085 ttcccaaccccatgaatct-tccccaaaaggcaccaaccattttcccaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 40146988  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  40146987 cacccaaagaccctcaacctttagtatct 40146959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 213380 - 213166
Alignment:
Q  14 cttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtttctaaacctcat 111  Q
    |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || ||||||  |||| |||    
T  213380 cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccat 213281  T
Q  112 gaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctcc-aagattcacatcttaaagctttgaacctcacccgaagacc 209  Q
    |||||| | || |||||| ||||||||| | ||||||| ||||||||||| |||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  213280 gaatct-tctccaaaaggcaccaacccttttcccaagagccccctctttt-ggttctcccaagattcacatcttgaagctttgaacctcacccaaagacc 213183  T
Q  210 ctcaacctttagtatct 226  Q
    |||||||||||||||||    
T  213182 ctcaacctttagtatct 213166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 27015456 - 27015230
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| |    |||||||||||||||||| ||||| ||||||||  | || |||    
T  27015456 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggttttacaagactcacccaagttgctcacaaaagactctccactcatgtgt 27015357  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||| ||| |  | |||||| ||||||||| | | ||||| ||||||||||| |||||| ||||||||||||||| ||||||||| |||    
T  27015356 ttcccaaccccatgattct-tccccaaaaggcaccaacccttttcacaagagccccctctttt-ggttcttcaagattcacatcttgaagctttgatcct 27015259  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  27015258 cacccaaagaccctcaacctttagtatct 27015230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 38746929 - 38746703
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| ||||||||||||||||   ||| ||||||| ||||||| ||   ||||||||||||||||||  |||| ||||||||  | |  |||    
T  38746929 aagagaaccaacccttagcctttgatttcaataaggatcttctcttttggtttcacaagactcacccaagttgctcgcaaatgactctccactcacgtgt 38746830  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctccc-aagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | |||||| ||||||||| | |  |||| ||||||||||| |||||||||||||||||||||| || ||||||||||    
T  38746829 ttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcttaagagccccctctttt-ggttctccaagattcacatcttgaaactttgaacct 38746732  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  38746731 cacccaaagaccctcaacctttagtatct 38746703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 5057971 - 5057746
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||  | ||| ||||||| ||||||| ||   |||||| ||||||||||| ||||| ||||||||  | || |||    
T  5057971 aagagaaccaacccttagcctttgattttactaaggatcttctcttttggtttcacaagactcgcccaagttgctcacaaatgactctccactcatgtgt 5057872  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    ||   |||| ||||||||| |  | |||||| ||||||| | | || | || |||||||||| ||||||| |||||||||||||| ||||||||| ||||    
T  5057871 tttccaaccccatgaatct-tccccaaaaggcaccaacctttttcccaaaagcccctctttt-ggttctcaaagattcacatcttgaagctttgatcctc 5057774  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| |||||||||||||||||||||||    
T  5057773 acccaaagaccctcaacctttagtatct 5057746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 28278240 - 28278013
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaaga-tcttctattttggtatccatagactcacccaagttgcttacaa-agactctcctttgatatgt 98  Q
    |||||| ||||| |||||| ||||||||| | || | |||||| ||||| | ||   |||||||||||||||||| |||| || ||||||  | || |||    
T  28278240 aagagagccaacccttagcatttgatttcactaacaatcttctcttttgatttcacaagactcacccaagttgctcacaatagtctctccactcatgtgt 28278141  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccc-tcttttaggttctccaagattcacatcttaaagctttgaacc 196  Q
    |||  |||| ||||||||| |  | |||||| ||||||||| | ||||||| ||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  28278140 ttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagcccccctctttt-ggttctccaagattcacatcttgaagctttgaacc 28278043  T
Q  197 tcacccgaagaccctcaacctttagtatct 226  Q
    ||| || |||||||||||||||||||||||    
T  28278042 tcatccaaagaccctcaacctttagtatct 28278013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 14689655 - 14689869
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    |||||||||||| | ||||||||||||| |  | |||||| | ||||||| |||  ||||| | | |||||||| ||||| |||||||||| || |||||    
T  14689655 aagagaaccaacccctagcctttgattttctaaggatcttttcttttggtgtcccaagacttatctaagttgctcacaaatactctccttttatgtgttt 14689754  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcac 200  Q
    |  |  |||| |||||||  || |||||| ||||||||| || |||||||||| |||||| |||||||||| ||||||||||| || |||||||| ||||    
T  14689755 cccattctcacgaatctc--tccaaaaggcaccaaccctttcacaagaaccccttctttt-ggttctccaaaattcacatcttgaaactttgaacatcac 14689851  T
Q  201 ccgaagaccctcaacctt 218  Q
     | |||||||| ||||||    
T  14689852 tcaaagacccttaacctt 14689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 16642247 - 16642346
Alignment:
Q  124 aaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagta 223  Q
    |||||| ||||||||| |||||||| |||  |||||| |||||| |||||||||| |||| |||||||||||||||||| |||||| |||||||||||||    
T  16642247 aaaaggcaccaaccctttcccaagagccc--tctttt-ggttcttcaagattcacttcttgaagctttgaacctcacccaaagaccatcaacctttagta 16642343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 4160556 - 4160333
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtt 99  Q
    |||||||||||| |||||||||| ||| ||  | |||||||| ||||||| |||  ||| |||||| ||||||| ||||| ||||||||  | |  ||||    
T  4160556 aagagaaccaacccttagcctttaattacctaaggatcttctcttttggtttcccaagattcaccctagttgctcacaaatgactctccacttacgtgtt 4160457  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctca 199  Q
     | || ||| ||||||||||  | |||||  ||  |||||||||||||| |||||||||||| |||||||| ||||||| |||| || |||||||| |||    
T  4160456 cccaaccct-atgaatctctccccaaaagacacttaccctctcccaagagccccctctttta-gttctccaggattcacttctttaaactttgaacatca 4160359  T
Q  200 cccgaagaccctcaacctttagtatct 226  Q
    ||| || |||||||| |||||||||||    
T  4160358 ccc-aaaaccctcaaactttagtatct 4160333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 10055077 - 10055175
Alignment:
Q  126 aagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatc 225  Q
    |||| ||||| ||| |||||||| ||| ||||||| |||||||||||||||||||||| |||||||||| ||||||| || ||| |||| ||||||||||    
T  10055077 aaggcaccaaacctttcccaagagccctctctttt-ggttctccaagattcacatcttgaagctttgaatctcacccaaaaaccttcaatctttagtatc 10055175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 27638001 - 27638084
Alignment:
Q  141 tcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||||| | ||||||||| |||||||||||||||||||||| || ||||||||||||||| ||||  |||||||||||||||||    
T  27638001 tcccaagagctccctctttt-ggttctccaagattcacatcttgaa-ctttgaacctcacccaaagattctcaacctttagtatct 27638084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 30802760 - 30802649
Alignment:
Q  104 aacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccg 203  Q
    |||| |||||||||||  | |||||| || |||||| |||||||| || |||||||| ||||||| |||||  ||||| | |||||||||||||||||      
T  30802760 aaccccatgaatctctccccaaaaggcacaaaccctttcccaagagcctcctctttt-ggttctctaagata-acatcatgaagctttgaacctcaccta 30802663  T
Q  204 aagaccctcaacct 217  Q
    ||||||||||||||    
T  30802662 aagaccctcaacct 30802649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 30793002 - 30792939
Alignment:
Q  162 ggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||||||||||  ||||||| ||||||||||| |||||  |||||||||||||||||||||||    
T  30793002 ggttctccaagata-acatcttgaagctttgaacatcacctaaagaccctcaacctttagtatct 30792939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 3e-53; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 41135743 - 41135519
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    |||||||||||  |||||||||| ||||||  | |||||||| ||||||| |||  ||||||||||||||| || ||||||||||||||||||| |||||    
T  41135743 aagagaaccaatccttagcctttaatttccaaatgatcttctcttttggtttcctaagactcacccaagtttctcacaaagactctcctttgatgtgttt 41135644  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcac 200  Q
    |  |||| |||||||||||  | |||||| |||||||||||||||| | |  |||||||| ||||||||||||| |||||||| ||| ||||||||||||    
T  41135643 cccaaccccatgaatctctccctaaaaggcaccaaccctctcccaaaatcttcctctttt-ggttctccaagatccacatcttgaaggtttgaacctcac 41135545  T
Q  201 ccgaagaccctcaacctttagtatct 226  Q
    || |||||||||||||||||||||||    
T  41135544 ccaaagaccctcaacctttagtatct 41135519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 37033317 - 37033540
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| | |||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  37033317 aagagaaccaacccatagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgt 37033416  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  ||||||||||||||   || |||||| ||||||||| | ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  37033417 ttcccaacctcatgaatcttcctc-aaaaggcaccaacccttttcccaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 37033514  T
Q  198 cacccgaagaccctcaacctttagta 223  Q
    ||||| ||||||||||||||||||||    
T  37033515 cacccaaagaccctcaacctttagta 37033540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 42298219 - 42298445
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    ||||||||||||||||||||||||||||| |  || ||||||| ||||||| ||   ||||||||||||||||||  |||| ||||||||  | || |||    
T  42298219 aagagaaccaactcttagcctttgatttcacttaggatcttctcttttggtttcacaagactcacccaagttgctcgcaaatgactctccactcatgtgt 42298318  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| | || |||||| ||||||||| | | ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  42298319 ttcccaaccccatgaatct-tctccaaaaggcaccaacccttttcacaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 42298416  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  42298417 cacccaaagaccctcaacctttagtatct 42298445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 28242312 - 28242087
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| | |||||||||||||| | ||| || |||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  28242312 aagagaaccaacccatagcctttgatttcactaaggatattctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgt 28242213  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  ||||| ||||||||  | | |||||| ||||||||| | ||||||| ||||||||||| ||||||||||||||||||| || |||||||||||||    
T  28242212 ttcccaaccttatgaatct--tcccaaaaggcaccaacccttttcccaagagccccctctttt-ggttctccaagattcacattttgaagctttgaacct 28242116  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  28242115 cacccaaagaccctcaacctttagtatct 28242087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 47115095 - 47114870
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| ||||||||||||||||   ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| |||||||| || || |||    
T  47115095 aagagaaccaacccttagcctttgatttcattaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccattcatgtgt 47114996  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| |||||||||  | | |||||| ||||||||| | ||||||| ||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  47114995 ttcccaaccccatgaatct--tcccaaaaggtaccaaccctgttcccaagagccccctctttt-ggttctccaagattcacagcttgaagctttgaacct 47114899  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||||||||||| ||||| |||||    
T  47114898 cacccaaagaccctcaatctttaatatct 47114870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 11348622 - 11348396
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  11348622 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgt 11348523  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggacca-accctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    ||   |||| ||||||||| | || |||||| |||| ||| | |||||||| ||||||||||| |||||||||||||||||||||| || ||||||||||    
T  11348522 tttccaaccccatgaatct-tctccaaaaggcaccagaccttttcccaagagccccctctttt-ggttctccaagattcacatcttgaaactttgaacct 11348425  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||||||||||||| |||||||||    
T  11348424 cacccaaagaccctcaacccttagtatct 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 37168221 - 37167995
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    ||||||| ||||  ||||||||||||||| | ||| ||||||| |||| || ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  37168221 aagagaatcaacctttagcctttgatttcactaaggatcttctcttttagtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgt 37168122  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | |||||| ||||||||| | ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  37168121 ttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 37168024  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| || ||||||||||||||||||||    
T  37168023 cacccaaaaaccctcaacctttagtatct 37167995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 7482476 - 7482701
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtt 99  Q
    |||||||||||| |||||| ||||||||||  | |||||||| |||| || ||   |||||||||||||||||| ||||| ||||||||  | || ||||    
T  7482476 aagagaaccaacccttagc-tttgatttcctaaggatcttctctttttgtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtt 7482574  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccc-tcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    ||  |||| ||||||||| |  | |||||| ||||||||| | ||||||| ||||| |||||| |||||||||||||||||||||| |||||||||||||    
T  7482575 tcccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagcccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 7482672  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||||||||||||| |||||||||    
T  7482673 cacccaaagaccctcaaccgttagtatct 7482701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 224
Target Start/End: Original strand, 9109680 - 9109869
Alignment:
Q  35 gatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggacc 133  Q
    |||||||||||||| | |||  ||||||| |||| ||||| ||||| ||||||| |||||| ||| ||  ||||||||||||||||  | |||||  | |    
T  9109680 gatcttctattttgatttcccaagactcatccaaattgctcacaaaagactctcatttgatgtgtctcccaacctcatgaatctctccccaaaagacatc 9109779  T
Q  134 aaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtat 224  Q
    |||||||||||| ||  ||||| |||| |||||||||||||||||||||| ||| |||||||||||||| || ||||||||||||||||||    
T  9109780 aaccctctcccatgagtcccctttttt-ggttctccaagattcacatcttgaagttttgaacctcacccaaataccctcaacctttagtat 9109869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 29136171 - 29135946
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaaga-ctctcctttgatatgt 98  Q
    |||||||| ||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| | ||||||  | || | |    
T  29136171 aagagaactaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaaaactctccactcatgttt 29136072  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    ||| || || ||||||||| |  | |||||| ||||||||| | |||||||  |||||||||| |||||||||||||||||||||| |||||||||||||    
T  29136071 ttccaaccc-catgaatct-tccccaaaaggcaccaacccttttcccaagagtcccctctttt-ggttctccaagattcacatcttgaagctttgaacct 29135975  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||| | |||||||||||||||||||||||    
T  29135974 cactcaaagaccctcaacctttagtatct 29135946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 34603499 - 34603274
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtt 99  Q
    |||||||||||| |||||||||||||||||  | |||||||| ||||||| ||   |||||||||||||||||| ||||| |||| | |  | || ||||    
T  34603499 aagagaaccaacccttagcctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagacttttcactcatgtgtt 34603400  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    |   |||| ||||||||| |  | |||||| ||||||||| | ||||||| | ||||||||| |||||||||||||||||||||| ||||||||||| ||    
T  34603399 ttccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagctccctctttt-ggttctccaagattcacatcttgaagctttgaacatc 34603302  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| |||||| |||||||||| |||||    
T  34603301 acccaaagaccttcaacctttaatatct 34603274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 193535 - 193310
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   ||||||| |||||||||| ||||| |||||| |    || |||    
T  193535 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcatccaagttgctcacaaaagactcttcacacatgtgt 193436  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctccc-aagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| |||||||||  | | |||||| ||||||| | |||| |||| ||||||||||| |||||||||||||||||||| | |||||||||||||    
T  193435 ttcccaaccccatgaatct--tcccaaaaggcaccaaccttttccccaagagccccctctttt-ggttctccaagattcacatcatgaagctttgaacct 193339  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||  ||||||||||||||||| |||||    
T  193338 caccgaaagaccctcaacctttaatatct 193310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 13547333 - 13547559
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   ||| |||||||||||||| ||||| ||||||||  | || |||    
T  13547333 aagagaaccaacccttagcctttgatttcactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaaagactctccactcatgtgt 13547432  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    ||   |||| ||||||| |   || |||||| ||| ||||| | | ||||| | ||||||||| |||| ||||||||||||||||| |||||||||||||    
T  13547433 tttccaaccccatgaattttcctc-aaaaggcaccgacccttttcacaagagctccctctttt-ggttatccaagattcacatcttgaagctttgaacct 13547530  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  13547531 cacccaaagaccctcaacctttagtatct 13547559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 13549244 - 13549470
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   ||| |||||||||||||| ||||| ||||||||  | || |||    
T  13549244 aagagaaccaacccttagcctttgatttcactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaaagactctccactcatgtgt 13549343  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    ||   |||| ||||||| |   || |||||| ||| ||||| | | ||||| | ||||||||| |||| ||||||||||||||||| |||||||||||||    
T  13549344 tttccaaccccatgaattttcctc-aaaaggcaccgacccttttcacaagagctccctctttt-ggttatccaagattcacatcttgaagctttgaacct 13549441  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  13549442 cacccaaagaccctcaacctttagtatct 13549470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 12318726 - 12318873
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    |||||||||||| |||||||||||||||||  ||||| |||||||||||| |||  |||||||||||||||||| | ||| ||||||||||||| |||||    
T  12318726 aagagaaccaacccttagcctttgatttccaaaagattttctattttggtctcccaagactcacccaagttgctcataaaaactctcctttgatgtgttt 12318825  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaaga 148  Q
    || || |  |||||  |||  | |||||| ||||||||||||||||||    
T  12318826 ctcaatcctatgaacttctccccaaaaggcaccaaccctctcccaaga 12318873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 34602584 - 34602809
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtt 99  Q
    |||||||||||| |||||||||||||||||  | |||||||| ||||||| ||   |||||||||||||||||| ||||| |||| | |  | || ||||    
T  34602584 aagagaaccaacccttagcctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagacttttcactcatgtgtt 34602683  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctctc-ccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    |   |||| ||||||||| |  | |||||| ||||||||| |  |||||| | ||||||||| |||||||||||||||||||||| ||||||||||| ||    
T  34602684 ttccaaccccatgaatct-tccccaaaaggcaccaacccttttaccaagagctccctctttt-ggttctccaagattcacatcttgaagctttgaacatc 34602781  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| |||||| |||||||||| |||||    
T  34602782 acccaaagaccttcaacctttaatatct 34602809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 47255720 - 47255804
Alignment:
Q  141 tcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  47255720 tcccaagagccccatctttt-ggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatct 47255804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 37879155 - 37879381
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||  |||||||||||||||| | ||| ||||||| ||||| | ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  37879155 aagagaaccaatccttagcctttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaaagactctccactcatgtgt 37879254  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||| | |  | |||||| ||||||| | | | ||||| ||||||||||| | |||||||||||||||||||| |||||||||||||    
T  37879255 ttcccaaccccatgaattt-tccccaaaaggcaccaacctttttcacaagagccccctctttttg-ttctccaagattcacatcttgaagctttgaacct 37879352  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||| ||||||| ||||||||||    
T  37879353 cacccaaagatcctcaacatttagtatct 37879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 22079127 - 22079039
Alignment:
Q  131 accaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaaccttta 220  Q
    |||||||||| |||||   ||||||||||| ||||||  |||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  22079127 accaaccctcacccaattgccccctctttt-ggttctttaagattcacatcttgaagctttgaacctcacccaaagaccctcaaacttta 22079039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 226
Target Start/End: Complemental strand, 19754358 - 19754189
Alignment:
Q  57 agactcacccaagttgcttacaaa-gactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccc 154  Q
    |||||||||||||||||| ||||| ||||||||  | || ||||||  |||| ||||||||| |  | |||||| ||||||||| | | ||||| |||||    
T  19754358 agactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcacaagagccccc 19754260  T
Q  155 tcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    ||| || |||| ||||||||||| ||| |   |||||||||||||||| |||||||| ||||||||||||||    
T  19754259 tctctt-ggttttccaagattcaaatcatggtgctttgaacctcacccaaagacccttaacctttagtatct 19754189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 6808210 - 6808145
Alignment:
Q  162 ggttctccaagattcacatcttaaagctttgaacctcacccgaaga-ccctcaacctttagtatct 226  Q
    |||||||||||||||||||||| ||| |||||||||||||  |||| |||||||||||||||||||    
T  6808210 ggttctccaagattcacatcttgaagttttgaacctcacctaaagacccctcaacctttagtatct 6808145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 31928222 - 31928278
Alignment:
Q  170 aagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||||||||||| ||||||||||||||| || ||||| |||||||||||||||||    
T  31928222 aagattcacatcttgaagctttgaacctcatccaaagactctcaacctttagtatct 31928278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 19752485 - 19752384
Alignment:
Q  124 aaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagta 223  Q
    |||||| ||||||| | ||  |||| |||| |||||| |||||||||||||||||||  | | |||| ||||||||||| |||||| |||||||||||||    
T  19752485 aaaaggcaccaaccttttcataagagccccatctttt-ggttctccaagattcacattatgacgcttagaacctcacccaaagaccttcaacctttagta 19752387  T
Q  224 tct 226  Q
    |||    
T  19752386 tct 19752384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 222
Target Start/End: Original strand, 16216847 - 16216959
Alignment:
Q  109 catgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagac 208  Q
    ||||||| ||| || |||| | ||||||||| | | |||| ||||||||||| |||||| ||||||  ||||||| || |||||||  |||||| |||||    
T  16216847 catgaatttctatccaaaatgcaccaacccttttcgaagagccccctctttt-ggttcttcaagatatacatcttgaacctttgaatatcacccaaagac 16216945  T
Q  209 cctcaacctttagt 222  Q
    ||| ||||||||||    
T  16216946 ccttaacctttagt 16216959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 22079232 - 22079145
Alignment:
Q  14 cttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgtttc 101  Q
    ||||||||||||||||   |  ||||| ||||||||| | |  ||||||||| |||||||| ||||||||||||| ||||| ||||||    
T  22079232 cttagcctttgatttcataagcatcttatattttggtttgccaagactcacctaagttgctcacaaagactctcccttgatgtgtttc 22079145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 3331333 - 3331285
Alignment:
Q  134 aaccctctcccaagaaccccctcttttaggttctccaagattcacatctt 183  Q
    |||||| |||||||| ||||||||||| ||||||| ||||||||||||||    
T  3331333 aaccctttcccaagagccccctctttt-ggttctctaagattcacatctt 3331285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 31925950 - 31926030
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaa-gatcttctattttggtatccatagactcacccaagttgcttacaaa 80  Q
    ||||||||||||  ||||||||||||||| | || |||||||| ||||||| ||   || ||||||||||||||| |||||    
T  31925950 aagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttcacaagtctcacccaagttgctcacaaa 31926030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 45726853 - 45726628
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatc-catagactcacccaagttgcttacaaa-gactctcctttgatatg 97  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| || ||| ||||||||||||||||| ||||| ||||||||  | || ||    
T  45726853 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacat-gactcacccaagttgctcacaaatgactctccactcatgtg 45726755  T
Q  98 tttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||| ||||| ||||||||| |  | |||||| ||||||||| |||||||| | ||||||||| |||||||||||||||||||||| |||||||||||||    
T  45726754 tttccaaaccccatgaatct-tccccaaaaggcaccaaccctttcccaagagctccctctttt-ggttctccaagattcacatcttgaagctttgaacct 45726657  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||||| |||||||||||||||||    
T  45726656 cacccaaagactctcaacctttagtatct 45726628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 57 - 226
Target Start/End: Original strand, 42261911 - 42262079
Alignment:
Q  57 agactcacccaagttgcttacaaagactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctc 156  Q
    |||||| ||||||||||| | ||| ||||||||||||| ||||||  || | |||||||||||  |  ||||| ||||||||||||| |||| ||||||     
T  42261911 agactcgcccaagttgctcataaaaactctcctttgatgtgtttcccaatcccatgaatctctcacctaaaggcaccaaccctctccaaagagccccctt 42262010  T
Q  157 ttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  42262011 tttt-ggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatct 42262079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 42288354 - 42288579
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  42288354 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgt 42288453  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| |||||||||  | | |||||| ||||||||| | ||||||| ||||||||||| |||||| ||||||||||||||| ||| |||||||||    
T  42288454 ttcccaaccccatgaatct--tcccaaaaggcaccaacccttttcccaagagccccctctttt-ggttcttcaagattcacatcttgaagttttgaacct 42288550  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  42288551 cacccaaagaccctcaacctttagtatct 42288579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 1631976 - 1632202
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  1631976 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgt 1632075  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | |||||  ||||||||| | | ||||| ||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  1632076 ttcccaaccccatgaatct-tccccaaaagacaccaacccttttcacaagagccccctctttt-ggttccccaagattcacatcttgaagctttgaacct 1632173  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||| | |||||||||||||||||||||||    
T  1632174 cactcaaagaccctcaacctttagtatct 1632202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 226
Target Start/End: Complemental strand, 17450513 - 17450289
Alignment:
Q  2 agagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactc-tcctttgatatgtt 99  Q
    |||||| |||| |||||||||||||||||  | |||||||| ||||||| ||   ||||||||||||||| || ||||  ||||| | |  | || ||||    
T  17450513 agagaatcaacccttagcctttgatttcctaatgatcttctcttttggtttcacaagactcacccaagtttctcacaattgactccttcgctcatgtgtt 17450414  T
Q  100 tctaaacctcatgaatctctttcgaaaaggg-accaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    ||  | || |||||||||  |||  |||||| ||||||||| |||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  17450413 tcccatccccatgaatct--ttcacaaagggcaccaaccctttcccaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacctc 17450317  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    || | |||||||||||||||||||||||    
T  17450316 actcaaagaccctcaacctttagtatct 17450289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 35447128 - 35447354
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| |    |||||||||||||||||| ||||| ||||||||  | || |||    
T  35447128 aagagaaccaacccttagcctttgatttcactaagtatcttctcttttggttttacaagactcacccaagttgctcacaaaagactctccactcatgtgt 35447227  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctc-caagattcacatcttaaagctttgaacc 196  Q
    |||  |||| ||||||||| || | |||||| ||||||||| | | ||||| |||| |||||| ||||||| ||||| ||||||||| ||||||||||||    
T  35447228 ttcccaaccccatgaatct-ttcccaaaaggcaccaacccttttcacaagagcccc-tctttt-ggttctctcaagactcacatcttgaagctttgaacc 35447324  T
Q  197 tcacccgaagaccctcaacctttagtatct 226  Q
    |||| | || || |||||||||||||||||    
T  35447325 tcacacaaatactctcaacctttagtatct 35447354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 24397857 - 24397755
Alignment:
Q  124 aaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagt 222  Q
    |||||| ||||||||| | ||||||| ||||||||||| ||||||||||||||||||| || |||||||||||||||| | |||||| ||||||||||||    
T  24397857 aaaaggcaccaacccttttcccaagagccccctctttt-ggttctccaagattcacattttgaagctttgaacctcacacaaagaccgtcaacctttagt 24397759  T
Q  223 atct 226  Q
    ||||    
T  24397758 atct 24397755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 33647969 - 33647867
Alignment:
Q  124 aaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagt 222  Q
    |||||| ||||||||| | ||||||| || |||||||| | |||||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||    
T  33647969 aaaaggcaccaacccttttcccaagagcctcctctttt-gattctccaagattcacatcttgaaactttgaacctcacccaaagaccttcaacctttagt 33647871  T
Q  223 atct 226  Q
    ||||    
T  33647870 atct 33647867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 57 - 226
Target Start/End: Original strand, 30218335 - 30218503
Alignment:
Q  57 agactcacccaagttgcttacaaagactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctc 156  Q
    |||||||| ||||||||| ||||||| ||||||||| | ||||||  |||| |||||||||||  | |||||| || ||| ||||||||  | ||| |      
T  30218335 agactcactcaagttgctcacaaagattctcctttggtgtgtttcccaaccccatgaatctctccccaaaaggcactaactctctcccataagccctcat 30218434  T
Q  157 ttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||| |||| |||||||||||||| || | | |||||||||||||| |||||||||||| | ||||||||    
T  30218435 tttt-ggttgtccaagattcacattttgatgttttgaacctcacccaaagaccctcaacatatagtatct 30218503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 7451078 - 7450999
Alignment:
Q  145 aagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||| ||||||||||| |||||||||||||||||||| | |||||||||||||||||| ||||| | |||||||||||||||    
T  7451078 aagagccccctctttt-ggttctccaagattcacatcctgaagctttgaacctcacccaaagacgc-caacctttagtatct 7450999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 24197698 - 24197643
Alignment:
Q  124 aaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacat 180  Q
    |||||| ||||||||||||||||||  |||||||||| ||||| |||||||||||||    
T  24197698 aaaaggcaccaaccctctcccaagagtcccctctttt-ggttccccaagattcacat 24197643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 8e-45; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 4512634 - 4512859
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||| ||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  4512634 aagagaactaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgt 4512733  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    ||| ||||| ||||||||| |  | |||||| ||||||||| |||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  4512734 ttccaaaccccatgaatct-tccccaaaaggcaccaaccctttcccaagagccccctctttt-ggttctctaagattcacatcttgaagctttgaacctc 4512831  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| |||||||||||||||||| ||||    
T  4512832 acccaaagaccctcaacctttagaatct 4512859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 29608660 - 29608439
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaaga-tcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | |||| |||||||||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  29608660 aagagaaccaacccttagcctttgatttcactaagaatcttctattttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgt 29608561  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||       |||||| ||||||||| | | ||||| ||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  29608560 ttcccaaccccatgaatcc------aaaaggcaccaacccttttcacaagagccccctctttt-ggttctccaagattcacatcttgaagttttgaacct 29608468  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  29608467 cacccaaagaccctcaacctttagtatct 29608439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 6431895 - 6431669
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||| ||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| |||||| |  | || |||    
T  6431895 aagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctacactcatgtgt 6431796  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctccc-aagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    ||   |||| ||||||||| |  | |||||| ||||||||| |||| |||| ||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  6431795 tttccaaccccatgaatct-tccccaaaaggcaccaaccctttccccaagagccccctctttt-ggttctccaagattcacatcttgaagttttgaacct 6431698  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  6431697 cacccaaagaccctcaacctttagtatct 6431669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 34310960 - 34311186
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    ||||||||||||  ||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  34310960 aagagaaccaacctttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgt 34311059  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    ||   | || |||||| || |  | |||||| ||||||||| | ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  34311060 tttccatccccatgaacct-tccccaaaaggcaccaacccttttcccaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 34311157  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| | |||||||||||||||||||||    
T  34311158 cacccaaggaccctcaacctttagtatct 34311186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 5116551 - 5116335
Alignment:
Q  8 ccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtttctaaac 106  Q
    |||||||||| |||||||||||| || |||||||| |||||||  ||  ||||||||| |||||  | ||||| ||| ||| |||||  |||||   ||     
T  5116551 ccaactcttaacctttgatttcctgaggatcttctcttttggttacccaagactcacctaagtttatcacaaatgaccctcatttgaagtgtttaccaat 5116452  T
Q  107 ctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaag 206  Q
    |  |||||||||| || |||||| ||| |||||||||||||| ||||||||||| ||||||| |||||||||||||| ||| ||||||| |||||  |||    
T  5116451 ccaatgaatctctctccaaaaggcaccgaccctctcccaagagccccctctttt-ggttctcaaagattcacatcttgaagttttgaacatcacctaaag 5116353  T
Q  207 accctcaacctttagtat 224  Q
    ||||||||||||||||||    
T  5116352 accctcaacctttagtat 5116335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 2390206 - 2389980
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| |||| |||  | || |||    
T  2390206 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactatccactcatgtgt 2390107  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    ||   |||| ||||||||| |  | |||||  ||||||||| | | ||| | ||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  2390106 tttccaaccccatgaatct-tccccaaaagccaccaacccttttcgcaatagccccctctttt-ggttttccaagattcacatcttgaagctttgaacct 2390009  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  2390008 cacccaaagaccctcaacctttagtatct 2389980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 226
Target Start/End: Complemental strand, 3258916 - 3258694
Alignment:
Q  3 gagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtttc 101  Q
    |||||||||| |||||  ||||||||||  | |||||||| ||||||| ||   |||||||||||||||||| | ||| ||||||||  | |||||||||    
T  3258916 gagaaccaacccttagg-tttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctaataaaagactctccactcatatgtttc 3258818  T
Q  102 taaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcac 200  Q
      | || ||||||||| |  | |||||| ||||||||| | ||||||| |||| |||||| | |||||||||||||||||| | ||||||||||||||||    
T  3258817 ccatccccatgaatct-tccccaaaaggcaccaacccttttcccaagagccccatctttttg-ttctccaagattcacatcatgaagctttgaacctcac 3258720  T
Q  201 ccgaagaccctcaacctttagtatct 226  Q
    || |||||||||||||||||||||||    
T  3258719 ccaaagaccctcaacctttagtatct 3258694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 6360156 - 6360382
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||| | ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  6360156 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaatgactctccactcatgtgt 6360255  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    || | |||  |||||||||  ||| |||||| ||||  ||| | | ||||| ||||||||||| |||||||||||||||||||||| || |||| |||||    
T  6360256 ttttcaactccatgaatcttcttc-aaaaggcaccattccttttctcaagagccccctctttt-ggttctccaagattcacatcttgaaacttttaacct 6360353  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||||||||||||||||| |||||    
T  6360354 cacccaaagaccctcaacctttaatatct 6360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 32358204 - 32358306
Alignment:
Q  124 aaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagt 222  Q
    |||||| ||||||||| | | ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  32358204 aaaaggcaccaacccttttcacaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagt 32358302  T
Q  223 atct 226  Q
    ||||    
T  32358303 atct 32358306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 2361215 - 2361441
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  2361215 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcataagactcacccaagttgctcacaaaagactctccactcatgtgt 2361314  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||  |  | |||||| ||||||||| | | ||||| ||||||||||| | |||| ||||||||||||||| |||  ||||| ||    
T  2361315 ttcccaaccccatgaatca-tccccaaaaggcaccaacccttttcacaagagccccctctttt-gattcttcaagattcacatcttgaaggattgaatct 2361412  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||||||||||| |||||||||||    
T  2361413 cacccaaagaccctcaatctttagtatct 2361441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 22269897 - 22269673
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaa-agactctcctttgatatgt 98  Q
    |||||||||||| | |||||| ||||||| | ||| ||||||||||||||| ||   ||||||||||||||| ||  ||| |||||||||  | || |||    
T  22269897 aagagaaccaacccatagcctatgatttcactaaggatcttctattttggtttcacaagactcacccaagtttctctcaatagactctccactcatgtgt 22269798  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    |||    || ||||||||| |  | |||||| |||||| || |||||||| |||| |||||| ||||||||||||||||||||||  |||||||||||||    
T  22269797 ttcccctccccatgaatct-tccccaaaaggcaccaactctttcccaagagcccc-tctttt-ggttctccaagattcacatcttgtagctttgaacctc 22269701  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| ||||||||||| |||||||||||    
T  22269700 acccaaagaccctcaaactttagtatct 22269673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 4508950 - 4509167
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||  |||||||||||||||| | ||| ||||| | ||||||| ||   ||||||||| |||||||| ||||| ||||||||  | || |||    
T  4508950 aagagaaccaatccttagcctttgatttcactaaggatcttatcttttggtttcacaagactcaccaaagttgctcacaaatgactctccactcatgtgt 4509049  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    |||  |||| ||||||||| |  | |||||| ||||||||| |||||||| | ||||||||| |||||||        ||||||| ||||||||||||||    
T  4509050 ttcccaaccccatgaatct-tccccaaaaggcaccaaccctttcccaagagctccctctttt-ggttctc--------acatcttgaagctttgaacctc 4509139  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| || ||||||||||||||||||||    
T  4509140 acccaaaaaccctcaacctttagtatct 4509167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 4510792 - 4511009
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||   ||||||||||||||| | ||| ||||||| ||||||| ||   ||||||||| |||||||| ||||| ||||||||  | || |||    
T  4510792 aagagaaccaatcgttagcctttgatttcactaaggatcttctcttttggtttcacaagactcaccaaagttgctcacaaatgactctccactcatgtgt 4510891  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    |||  |||| ||||||||| |  | |||||| ||||||||| |||||||| | ||||||||| |||||||        ||||||| ||||||||||||||    
T  4510892 ttcccaaccccatgaatct-tccccaaaaggcaccaaccctttcccaagagctccctctttt-ggttctc--------acatcttgaagctttgaacctc 4510981  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| || ||||||||||||||||||||    
T  4510982 acccaaaaaccctcaacctttagtatct 4511009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 48599742 - 48599794
Alignment:
Q  174 ttcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  48599742 ttcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatct 48599794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 22328643 - 22328869
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtt 99  Q
    |||||||||||| |||||| ||||||| |   | ||| |||| |||| || |||  ||| |||||||||||||| ||||| |||||||   | || | ||    
T  22328643 aagagaaccaacccttagcttttgattacataaggatattctcttttagtttcccaagattcacccaagttgctcacaaatgactctctactcatgtttt 22328742  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctctccc-aagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    ||  ||||  ||||||||||  | |||||| |||||| || | || |||| ||||||||||| |||||||||||||| ||||||| ||||||| ||||||    
T  22328743 tcccaaccctatgaatctctccccaaaaggcaccaactcttttcctaagagccccctctttt-ggttctccaagatttacatcttgaagcttttaacctc 22328841  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
      || |||| ||||||||||||||||||    
T  22328842 caccaaagatcctcaacctttagtatct 22328869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 43363667 - 43363839
Alignment:
Q  9 caactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgtttctaaacct 108  Q
    |||| |||||| ||| ||||||  |||||||||| ||||||| ||   ||| |||||||| ||||| |||| ||||||| | | || ||||||| ||||     
T  43363667 caacccttagcatttaatttcctaaagatcttctcttttggtctctcaagattcacccaaattgctcacaaggactctcatctcatgtgtttctcaacc- 43363765  T
Q  109 catgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatctt 183  Q
    | |||||||||| | |||||| ||||||  | |||||||| | |||||||||| |||||||||||| ||||||||    
T  43363766 cttgaatctcttcccaaaaggaaccaacaatgtcccaagagctccctctttta-gttctccaagatacacatctt 43363839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 48599578 - 48599666
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaa-gatcttctattttggtatccatagactcacccaagttgcttac-aaagactctc 87  Q
    |||||||||||| |||||||||||||||| | || |||||||| ||||||| ||   |||||||||||||||||| || ||||||||||    
T  48599578 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctc 48599666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 30814504 - 30814463
Alignment:
Q  185 aagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  30814504 aagctttgaacctcacccaaagaccctcaaccttaagtatct 30814463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 22552792 - 22552897
Alignment:
Q  109 catgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagac 208  Q
    ||||||||| || | |||||| ||||||| | ||| |||| ||||||||||| ||||||| ||||||||||| || |  |||| || ||||||| |||||    
T  22552792 catgaatcttttcccaaaaggcaccaaccgtttcc-aagagccccctctttt-ggttctctaagattcacattttgaccctttaaatctcacccaaagac 22552889  T
Q  209 cctcaacc 216  Q
    ||||||||    
T  22552890 cctcaacc 22552897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 8359567 - 8359708
Alignment:
Q  6 aaccaactcttagcctttgatttcccgaa-gatcttctattttggtatccatagactcacccaagttgcttac-aaagactctcctttgatatgtttcta 103  Q
    |||||||||||||||||||||||| | || ||| |||| ||||||| ||   ||||||| |||||||||| || |||||||||||  | || ||||||      
T  8359567 aaccaactcttagcctttgatttcactaaggattttctcttttggtttcacaagactcatccaagttgctcacaaaagactctccactcatgtgtttccc 8359666  T
Q  104 aacctcatgaatctctttcgaaaagggaccaaccctctcccaa 146  Q
    |||| ||||||||| |  | |||||| ||||||||| ||||||    
T  8359667 aaccccatgaatct-tccccaaaaggcaccaaccctttcccaa 8359708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 37545306 - 37545344
Alignment:
Q  156 cttttaggttctccaagattcacatcttaaagctttgaa 194  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  37545306 ctttttggttctccaagattcacatcttaaacctttgaa 37545344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 5e-43; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 42435235 - 42435461
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||| ||||||||| ||||| |||||||| || ||||||    
T  42435235 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcactcaagttgctcacaaaagactctccattcatatgt 42435334  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | |||||  ||||||| | | ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  42435335 ttcccaaccccatgaatct-tccccaaaagtcaccaacctttttcccaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 42435432  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  42435433 cacccaaagaccctcaacctttagtatct 42435461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 11383910 - 11383684
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| |||| |||  | || | |    
T  11383910 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactttccacttatgtat 11383811  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| |||||||||   || |||||| ||||||||| | | ||| | ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  11383810 ttcccaaccccatgaatcttcctc-aaaaggcaccaacccttttcacaatagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 11383713  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  11383712 cacccaaagaccctcaacctttagtatct 11383684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 40328703 - 40328477
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaa-gatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||||| |||||||||||||| | || |||||||| ||||||| ||   |||||||||||||||||| ||||| |||||| |  | || |||    
T  40328703 aagagaaccaactcatagcctttgatttcactaaagatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctacactcatgtgt 40328604  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  | || ||||||||| |  | |||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||| | |||||||||||||    
T  40328603 ttcccatccccatgaatct-tccctaaaaggcaccaacccttttcccaagaaccccctctttt-ggttctccaagattcacatcatgaagctttgaacct 40328506  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||| || |||||||||||    
T  40328505 cacccaaagaccctaaatctttagtatct 40328477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 40585648 - 40585423
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    |||||||||||| ||||| |||||||||||  | |||||||| ||||||| | |  | |||||||||| ||||| ||||||||||||||||||| |||||    
T  40585648 aagagaaccaacccttagtctttgatttcctaaggatcttctcttttggtctaccaatactcacccaaattgctcacaaagactctcctttgatgtgttt 40585549  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctca 199  Q
      ||||| |||||||||||  | |||||  | |||||||||||  |||| ||| ||||||| | ||||| || ||||||||||| |||||||||||||||    
T  40585548 tcaaaccccatgaatctctcaccaaaagacatcaaccctctccaaaagagcccactctttt-gattctcaaatattcacatcttgaagctttgaacctca 40585450  T
Q  200 cccgaagaccctcaacctttagtatct 226  Q
     || ||||| || ||||||||||||||    
T  40585449 accaaagactcttaacctttagtatct 40585423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 2999896 - 2999990
Alignment:
Q  131 accaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  2999896 accaaccatatcccaagaaccccctctttt-ggttctccaagattcacatcttgaagctttgaacatcacccaaagaccctcaacctttagtatct 2999990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 22976314 - 22976232
Alignment:
Q  143 ccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||| || |||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  22976314 ccaagagcctcctctttt-ggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatct 22976232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 44353716 - 44353493
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaaga-tcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | |||| |||| | ||||||| ||   |||||||||||||||||| ||  | ||||||||  | || |||    
T  44353716 aagagaaccaacccttagcctttgatttcactaagaatcttttcttttggtttcacaagactcacccaagttgctcaccgatgactctccactcatgtgt 44353617  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    ||   |||| ||||||||| | || |||||| ||||||||||| | ||||| ||||||||||||| |||||||||||||   |||| ||| ||| |||||    
T  44353616 tttccaaccccatgaatct-tctccaaaaggcaccaaccctcttcacaagagccccctcttttag-ttctccaagattc---tcttgaagttttaaacct 44353522  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  44353521 cacccaaagaccctcaacctttagtatct 44353493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 4283328 - 4283244
Alignment:
Q  141 tcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||| | ||||||||||| ||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  4283328 tcccaaaagccccctctttt-ggttctccaagatccacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatct 4283244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 40221669 - 40221444
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    ||||||||||||  ||||||||||||||| | ||| ||||||| ||||||| |    ||||||||| |||||||| ||||| ||||||||  | || |||    
T  40221669 aagagaaccaacctttagcctttgatttcactaaggatcttctcttttggttttacaagactcacctaagttgctcacaaaagactctccactcatgtgt 40221570  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccc-tctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | |||||| || ||||| | |||||||| |||||| |||| ||||||| |||||||||||||| ||| | | |||||    
T  40221569 ttcccaaccccatgaatct-tccccaaaaggcactaacccctttcccaagagccccctatttt-ggttctcgaagattcacatcttgaagttctaaacct 40221472  T
Q  198 cacccgaagaccctcaacctttagtatc 225  Q
    || || |||||| || ||||||||||||    
T  40221471 catccaaagaccttccacctttagtatc 40221444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 33655549 - 33655659
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    |||||||||||| |||| |||||||||| |  | |||||||| ||||| | |||  ||| |||||||| ||||| |||||||| ||||||| || |||||    
T  33655549 aagagaaccaacccttaacctttgattttctaaggatcttctcttttgttctcctaagattcacccaaattgctcacaaagacactcctttaatgtgttt 33655648  T
Q  101 ctaaacctcat 111  Q
    | |||||||||    
T  33655649 ccaaacctcat 33655659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 3846082 - 3846283
Alignment:
Q  19 cctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgtttctaaacctcatgaatctc 118  Q
    ||||||||||||  |||||| ||| |||||||||||| ||| | |||||| ||||| ||||||| ||| || | || ||||||  |||| ||||||||||    
T  3846082 cctttgatttccaaaagatcgtctcttttggtatccaaagatttacccaatttgctcacaaagaatcttctctcatgtgtttcccaaccccatgaatctc 3846181  T
Q  119 tttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctt 218  Q
    |  | |||||  |||||| || | ||||| | | | |||||| |||||| ||||||||||||  | || ||||||| ||||| | |  ||||||||||||    
T  3846182 tccccaaaagacaccaactcttttccaag-agctcttctttt-ggttcttcaagattcacattatgaacctttgaatctcactcaagaaccctcaacctt 3846279  T
Q  219 tagt 222  Q
    ||||    
T  3846280 tagt 3846283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 20686463 - 20686526
Alignment:
Q  162 ggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||| ||||||||||||||||| ||||||||||| ||| || |||| ||||||| ||||||||||    
T  20686463 ggttatccaagattcacatcttgaagctttgaacttca-ccaaagatcctcaacatttagtatct 20686526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 40535650 - 40535551
Alignment:
Q  124 aaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagta 223  Q
    |||||| | ||||||| || ||||||||||||||||| ||||||  ||||| |||| ||| || ||||||||  ||||| |||||| |||| ||||||||    
T  40535650 aaaaggcatcaaccctttctcaagaaccccctctttt-ggttctaaaagatccacaacttgaaactttgaac--cacccaaagaccatcaatctttagta 40535554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4283448 - 4283368
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaa-gatcttctattttggtatccatagactcacccaagttgcttacaaa 80  Q
    |||||||||||| |||||||||||||||| | || |||||||| ||||||| ||   ||||||| ||||||| || |||||    
T  4283448 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcaaccaagtttctcacaaa 4283368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 10020229 - 10020150
Alignment:
Q  134 aaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaa 214  Q
    |||||| |||||||| ||||||||||| ||||||| ||||||||||| || |   |||||| ||||||  |||||||||||    
T  10020229 aaccctttcccaagagccccctctttt-ggttctctaagattcacatattgatcatttgaatctcacctaaagaccctcaa 10020150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 10101512 - 10101583
Alignment:
Q  108 tcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacat 180  Q
    ||||||||||||| | |||| | | ||||||| |||||||| || |||||||| ||||||||||| |||||||    
T  10101512 tcatgaatctcttcccaaaatgcagcaaccctttcccaagagcctcctctttt-ggttctccaaggttcacat 10101583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 34491137 - 34490911
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  34491137 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgt 34491038  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    || | |||  ||||||||| | || |||||| ||||||||| | | ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  34491037 ttttcaactccatgaatct-tctccaaaaggcaccaacccttttcacaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 34490940  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  34490939 cacccaaagaccctcaacctttagtatct 34490911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 34795792 - 34795568
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    |||||||||| | ||||||||||||||| |  | |||||||| ||||||| |||  ||||||||||||||| |||||||| ||||||||||||| ||| |    
T  34795792 aagagaaccatcccttagcctttgattttctaaggatcttctcttttggtctcccaagactcacccaagtttcttacaaaaactctcctttgatgtgtat 34795693  T
Q  101 ctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcac 200  Q
    |  |||| |||||||||||    |||||| |  || |||||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||||| ||||    
T  34795692 cccaaccccatgaatctctcctcaaaaggcatgaaacctctccctagaaccccctcttct-ggttctccaagattcagatcttgaagctttgaacatcac 34795594  T
Q  201 ccgaagaccctcaacctttagtatct 226  Q
    || | |||| ||||||||||||||||    
T  34795593 ccaacgaccatcaacctttagtatct 34795568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 6095843 - 6096069
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    ||||||||||||  ||||| ||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  6095843 aagagaaccaacctttagcatttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgt 6095942  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccc-tctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | |||||| |||||||| | ||  |||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  6095943 ttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcaaaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 6096040  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  6096041 cacccaaagaccctcaacctttagtatct 6096069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 41819768 - 41819991
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtt 99  Q
    |||||||||||| |||||| |||||||||   |||||||||| ||||||| ||   |||||||| ||||||||| ||||| || |||||  | || ||||    
T  41819768 aagagaaccaacccttagc-tttgatttcataaagatcttctcttttggtttcataagactcactcaagttgctcacaaatgagtctccactcatgtgtt 41819866  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    ||  |||| |||||||||  | | |||||| ||||||||| | ||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  41819867 tcccaaccccatgaatct--tcccaaaaggcaccaacccttttcccaagagccccctctttt-ggttctctaagattcacatcttgaagctttgaacctc 41819963  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| |||||||||||||||||||||||    
T  41819964 acccaaagaccctcaacctttagtatct 41819991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 26323821 - 26323982
Alignment:
Q  64 cccaagttgcttacaaagactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttagg 163  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||| |||||||||||   ||||| | ||||||||| |||||| | ||| ||||||| |     
T  26323821 cccaagttgctcacaaagactctcctttgatgtgtttctcaaccccatgaatctctgctgaaaatgcaccaaccctttcccaatagccctctctttt-ga 26323919  T
Q  164 ttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||| ||||||| ||||||| ||||||||||| |||||| | |||||||||||||||||||||    
T  26323920 ttcttcaagatttacatcttgaagctttgaacttcacccaatgaccctcaacctttagtatct 26323982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 46860396 - 46860169
Alignment:
Q  1 aagagaaccaac--tcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatg 97  Q
    ||||||||||||  |||||| |||||||||||  | |||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || ||    
T  46860396 aagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtg 46860297  T
Q  98 tttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacc 196  Q
    ||||  | ||  |||||||| |  | |||||| ||||||||| | ||||||| ||||||||||| |||||||||||||||||||| | ||||||||||||    
T  46860296 tttcccatccctatgaatct-tccccaaaaggcaccaacccttttcccaagagccccctctttt-ggttctccaagattcacatcatgaagctttgaacc 46860199  T
Q  197 tcacccgaagaccctcaacctttagtatct 226  Q
    |||||| |||||||||||||||||||||||    
T  46860198 tcacccaaagaccctcaacctttagtatct 46860169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 49199714 - 49199941
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactca-cccaagttgcttacaaa-gactctcctttgatatg 97  Q
    ||||||||||||  ||||||||||||||| | ||| ||||||| ||||||| ||   ||||||| ||||||||||| ||||| ||||||||  | |||||    
T  49199714 aagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttcacaagactcaacccaagttgctcacaaaagactctccactcatatg 49199813  T
Q  98 tttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacc 196  Q
    ||||  |||| ||||||||| |  | |||||| ||||||||| | | ||| | ||||||||||| |||||||||||||||||||||| || |||||||||    
T  49199814 tttcccaaccccatgaatct-tccccaaaaggcaccaacccttttcacaatagccccctctttt-ggttctccaagattcacatcttgaaactttgaacc 49199911  T
Q  197 tcacccgaagaccctcaacctttagtatct 226  Q
    |||||| |||||||||||||||||||||||    
T  49199912 tcacccaaagaccctcaacctttagtatct 49199941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 40913263 - 40913036
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||| ||||| ||||| | ||| ||||||| ||||| | ||   |||||||||||| ||||| ||||| ||||||||  | || |||    
T  40913263 aagagaaccaacccttaacctttaatttcactaaggatcttctcttttgctttcacaagactcacccaatttgctcacaaatgactctccactcatgtgt 40913164  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| |||||||||  | | |||||| ||||||||| | ||||||| ||||||||||| ||||||||||||||||||| || |||||||||||||    
T  40913163 ttcccaaccccatgaatcttctccaaaaaggcaccaacccttttcccaagagccccctctttt-ggttctccaagattcacattttgaagctttgaacct 40913065  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||| ||||||||||||||    
T  40913064 cacccaaagaccctaaacctttagtatct 40913036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 43402034 - 43402260
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| | |||||||||||||| | ||| ||||||| ||||||| ||   ||||| |||||||||| | ||||| || |||||  | || |||    
T  43402034 aagagaaccaacccatagcctttgatttcactaaggatcttctcttttggtttcacaagacttacccaagttgttcacaaatgattctccactcatgtgt 43402133  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | |||||| ||||||||| | | ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  43402134 ttcccaaccccatgaatct-tccccaaaaggcaccaacccttttctcaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 43402231  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  43402232 cacccaaagaccctcaacctttagtatct 43402260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 54593621 - 54593403
Alignment:
Q  9 caactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtttctaaac 106  Q
    |||| |||||||||||||||| | ||| ||||||||||||||| ||   |||||||| ||||||||| ||||| ||||||||  | || |||||   | |    
T  54593621 caacccttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctcacaaaagactctccactcatgtgttttccatc 54593522  T
Q  107 ctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaa 205  Q
    | ||||||||| |  | |||||| ||||||||| | ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| |     
T  54593521 cccatgaatct-tccccaaaaggtaccaacccttttcccaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacctcacccaag 54593424  T
Q  206 gaccctcaacctttagtatct 226  Q
    |||||||||||||||||||||    
T  54593423 gaccctcaacctttagtatct 54593403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 36018775 - 36018549
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||  | |||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| |||||||| || || |||    
T  36018775 aagagaaccaatccatagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctccattcatgtgt 36018676  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  | || |||| |||| |  | |||||| ||||||||| | ||||| | | ||||||||| |||||||||||||||||||||| |||||||||||||    
T  36018675 ttcccatccccatggatct-tccccaaaaggcaccaacccttttcccaaaagctccctctttt-ggttctccaagattcacatcttgaagctttgaacct 36018578  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    || || |||||||||||||||||||||||    
T  36018577 catccaaagaccctcaacctttagtatct 36018549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 43403977 - 43404203
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| | |||||||||||||| | ||| ||||||| |||| || ||   ||||||||||||||||||  |||| ||||||||  | || |||    
T  43403977 aagagaaccaacccatagcctttgatttcactaaggatcttctcttttagtttcacaagactcacccaagttgctcccaaatgactctccactcatgtgt 43404076  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    ||   |||| ||||||||| |  | |||||| ||||||||| | ||||||| ||||||||||| |||||||||||||||||||||| || ||||||||||    
T  43404077 tttccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagccccctctttt-ggttctccaagattcacatcttgaaactttgaacct 43404174  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||| ||||||||||    
T  43404175 cacccaaagaccctcaacttttagtatct 43404203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 55302209 - 55302435
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| | |||||||||||||| | ||| ||||||| ||||||| ||   |||||||| ||||||||| ||||| || |||||  | || |||    
T  55302209 aagagaaccaacccctagcctttgatttcactaaggatcttctcttttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgt 55302308  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    ||   |||||||||||| | || | |||||| ||||||||| | ||||||| | ||||||||| |||||||||||||||||||||| |||||||||||||    
T  55302309 tttccaacctcatgaattt-ttcccaaaaggcaccaacccttttcccaagagctccctctttt-ggttctccaagattcacatcttgaagctttgaacct 55302406  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    || || |||||||||||| ||||||||||    
T  55302407 catccaaagaccctcaacttttagtatct 55302435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 47304175 - 47303950
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgtt 99  Q
    |||||||||||| |||||  ||||||||| | ||| || |||| ||||||| |    ||||||||| |||||||| ||||| |||||||  | || ||||    
T  47304175 aagagaaccaacccttagtttttgatttcactaaggatattctcttttggttttacaagactcacctaagttgctcacaaaaactctccactcatgtgtt 47304076  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    ||  |||| ||||||||| |  | |||||| ||||||||| | ||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  47304075 tcccaaccccatgaatct-tccccaaaaggcaccaacccttttcccaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacctc 47303978  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| |||||| ||||| ||||||||||    
T  47303977 acccaaagaccttcaacatttagtatct 47303950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 4569875 - 4569649
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaa-gatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | || |||| ||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  4569875 aagagaaccaacccttagcctttgatttcactaaagatcatctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgt 4569776  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | || ||| ||   |||| | ||||||| ||||||||||| | |||||||||||| ||||||| |||||||||||||    
T  4569775 ttcccaaccccatgaatct-tccccaataggcacacccccttttcccaagagccccctctttt-gattctccaagatttacatcttgaagctttgaacct 4569678  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  4569677 cacccaaagaccctcaacctttagtatct 4569649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 30235925 - 30235823
Alignment:
Q  124 aaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagt 222  Q
    |||||| ||||||||| | | ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  30235925 aaaaggcaccaacccttttcacaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagt 30235827  T
Q  223 atct 226  Q
    ||||    
T  30235826 atct 30235823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 28074399 - 28074315
Alignment:
Q  141 tcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||||| ||||||||||| |||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||    
T  28074399 tcccaagagccccctctttt-ggttctccaagattcacatcttgaaactttgaacctcacccaaagaccctcaacctttagtatct 28074315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 35 - 226
Target Start/End: Original strand, 35138985 - 35139183
Alignment:
Q  35 gatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggacca 134  Q
    |||||||||||||||| |||  |||||||  ||||||||| | |||||||||| |||||| |||||   ||||||||||||||||    |||||| | ||    
T  35138985 gatcttctattttggtctcccaagactcattcaagttgctcataaagactctcatttgatttgttttccaacctcatgaatctctcctcaaaaggcatca 35139084  T
Q  135 accctctcccaagaaccccctcttttaggttctccaagattc-------acatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||| ||||||||  |  ||| |||||||||||||||       ||||||||||| ||||||||||| |  |||||||||||| ||||||||||    
T  35139085 accctttccgaagaacccatttcttttggttctccaagattcacatcttacatcttaaagttttgaacctcatctaaagaccctcaacgtttagtatct 35139183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1683411 - 1683190
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtt 99  Q
    |||| ||||||| ||||||||||||||| |  | |||||||| ||||||| ||   ||||||||| |||||||| | ||| || | |||  | || ||||    
T  1683411 aagataaccaacccttagcctttgattttctaaggatcttctcttttggtctcacaagactcaccaaagttgctcataaatgattatccactcatgtgtt 1683312  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctca 199  Q
    |   |||| |||||||||||| | |||| | ||||||||| ||| || ||||  ||||||| ||||||||||||||||||| | |||  |||||| ||||    
T  1683311 ttccaaccccatgaatctcttcccaaaatgcaccaaccctttccgaaaaaccttctctttt-ggttctccaagattcacatttgaaacatttgaatctca 1683213  T
Q  200 cccgaagaccctcaacctttagt 222  Q
    ||| |||||||||||||||||||    
T  1683212 cccaaagaccctcaacctttagt 1683190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 201
Target Start/End: Complemental strand, 39127416 - 39127282
Alignment:
Q  66 caagttgcttacaaagactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggtt 165  Q
    ||||||||  ||||||||||   |||||| ||||||  ||||||||||||||||  | |||||| |||||| |||| ||||||  ||||| ||||| |||    
T  39127416 caagttgcccacaaagactcatatttgatgtgtttcccaacctcatgaatctctcccaaaaaggcaccaactctcttccaagagtcccctatttta-gtt 39127318  T
Q  166 ctccaagattcacatcttaaagctttgaacctcacc 201  Q
    ||| |||||||| ||||| |||||||||||||||||    
T  39127317 ctctaagattcatatcttgaagctttgaacctcacc 39127282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 226
Target Start/End: Original strand, 5434156 - 5434348
Alignment:
Q  35 gatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggacc 133  Q
    |||||||| ||||||| |||  |||||||||||| ||||| ||||| ||||||||  | || ||||||  |||| |||||||||||  | ||||   ||     
T  5434156 gatcttctcttttggtttcccaagactcacccaacttgctcacaaaagactctccactcatgtgtttcctaaccccatgaatctctccctaaaaaacact 5434255  T
Q  134 aaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||| | ||||||| ||||||||||| ||||||  |||||| ||||||| ||||||| |||||| | | |||||||| ||| ||| ||||||    
T  5434256 aacccttttcccaagagccccctctttt-ggttctataagatttacatcttgaagctttaaacctccctcaaagacccttaacttttggtatct 5434348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 20937580 - 20937462
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgttt 100  Q
    ||||||||||||  ||| ||||||||||||  |  ||||||| ||||||| |||  ||| |||||||||||  | |||||||||| | |||||| |||||    
T  20937580 aagagaaccaacctttatcctttgatttcctaagaatcttctcttttggtctcccaagaatcacccaagtttgtcacaaagactcccttttgatgtgttt 20937481  T
Q  101 ctaaacctcatgaatctct 119  Q
     | |||| |||||||||||    
T  20937480 ttcaaccacatgaatctct 20937462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 31340462 - 31340503
Alignment:
Q  141 tcccaagaaccccctcttttaggttctccaagattcacatctt 183  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  31340462 tcccaagagccccctctttt-ggttctccaagattcacatctt 31340503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 57 - 226
Target Start/End: Original strand, 490746 - 490914
Alignment:
Q  57 agactcacccaagttgcttacaaagactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctc 156  Q
    |||||| ||||||||||| | ||| ||||||||||||| ||||||  || | |||||||||||  |  ||||| ||||||||||||| |||| ||||||     
T  490746 agactcgcccaagttgctcataaaaactctcctttgatgtgtttcccaatcccatgaatctctcacctaaaggcaccaaccctctccaaagagccccctt 490845  T
Q  157 ttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  490846 tttt-ggttctccaagattcacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatct 490914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 7252 - 7026
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||  | ||| ||||||| ||||||| ||   |||||||||||||||||| ||||| ||||||||  | || |||    
T  7252 aagagaaccaacccttagcctttgattttactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgt 7153  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    ||   |||| ||||||||| |  | |||||| ||||||||| | | ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  7152 tttccaaccccatgaatct-tccccaaaaggcaccaacccttttcacaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 7055  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  7054 cacccaaagaccctcaacctttagtatct 7026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 603324 - 603550
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaag-actctcctttgatatgt 98  Q
    ||||||||||||  ||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||||| |||||| || ||||  | || |||    
T  603324 aagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaggacactccactcatgtgt 603423  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| | || |||||| ||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  603424 ttcccaaccccatgaatct-tctccaaaaggcaccaaccctttcctcaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 603521  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    || || ||||||||||||||||| |||||    
T  603522 catccaaagaccctcaacctttactatct 603550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 21593588 - 21593364
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtt 99  Q
    |||||||||||| |||||| ||||||||||  | |||||||| ||||||| ||   |||||||||||||||||| | ||| ||||||||  | || ||||    
T  21593588 aagagaaccaacccttagc-tttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcaaaaatgactctccactcatgtgtt 21593490  T
Q  100 tctaaacctcatgaatctctttcgaaaagggaccaaccctctccc-aagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctc 198  Q
    |   |||| ||||||||| | || |||||| ||||||||| |||| |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  21593489 ttccaaccccatgaatct-tctccaaaaggcaccaaccctttccccaagagccccctctttt-ggttctccaagattcacatcttaaatctttgaacctc 21593392  T
Q  199 acccgaagaccctcaacctttagtatct 226  Q
    |||| |||||||||||| ||||||||||    
T  21593391 acccaaagaccctcaacatttagtatct 21593364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 5043551 - 5043326
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    ||||||||||||||||||||||||||| | | ||| ||||||| ||||||| ||   |||||||||||| ||||| ||||| ||||||||  | || |||    
T  5043551 aagagaaccaactcttagcctttgattccactaaggatcttctcttttggtttcacaagactcacccaaattgctcacaaaagactctccactcatgtgt 5043452  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| |||||||||  | | |||||| ||||||||| | ||||||| ||| ||||||| ||||||||||||||| |||||| |||||||||||||    
T  5043451 ttcccaaccccatgaatct--tcccaaaaggcaccaacccttttcccaagagccctctctttt-ggttctccaagattctcatcttgaagctttgaacct 5043355  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||||||||||| |||||||||||    
T  5043354 cacccaaagaccctcaatctttagtatct 5043326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 2973183 - 2973409
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||||| ||   |||||||||||||||| | ||||| |||||| | || || |||    
T  2973183 aagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgttcacaaatgactctgcattcatgtgt 2973282  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| |  | |||| | ||||||||| | | ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  2973283 ttcccaaccccatgaatct-tcccaaaaaagcaccaacccttttcacaagagccccctctttt-ggttctccaagattcacatcttgaagctttgaacct 2973380  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||| ||||||||||||||||    
T  2973381 cacccaaagaccttcaacctttagtatct 2973409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 3808955 - 3809179
Alignment:
Q  4 agaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtttc 101  Q
    ||||||||| |||||||||||||||| | ||| || |||| ||||||| |    |||||||||||||||||| ||||| ||||||||  | || ||||||    
T  3808955 agaaccaacccttagcctttgatttcactaaggattttctcttttggttttacaagactcacccaagttgctcacaaatgactctccactcatgtgtttc 3809054  T
Q  102 taaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccc-tcttttaggttctccaagattcacatcttaaagctttgaacctca 199  Q
      |||| ||||||||| | || |||||| ||||||||| | | ||||| ||||| |||||| |||||||||||||||||||||| |||||||||||||||    
T  3809055 ccaaccccatgaatct-tctccaaaaggaaccaacccttttcacaagagcccccctctttt-ggttctccaagattcacatcttgaagctttgaacctca 3809152  T
Q  200 cccgaagaccctcaacctttagtatct 226  Q
    ||| |||||||||||||||||||||||    
T  3809153 cccaaagaccctcaacctttagtatct 3809179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 25073030 - 25072884
Alignment:
Q  78 aaagactctcctttgatatgtttctaaacctcatgaatctctttcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattca 177  Q
    ||||||||||||||||| |||||| |||||  ||||||||||| | || ||| || | |||| | |||||| |||||   ||| ||||||| ||||||||    
T  25073030 aaagactctcctttgatgtgtttccaaaccctatgaatctcttcccaagaggcacaatcccttttccaagagcccccc--tttgggttctcaaagattca 25072933  T
Q  178 catcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  25072932 catcttgaagctttgaacctcacccaaagaccctcaacctttagtatct 25072884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 17762913 - 17762685
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| |||| || ||   ||||||||||||||||||  |||| ||||||||  | || |||    
T  17762913 aagagaaccaacccttagcctttgatttcactaaggatcttctctttttgtttcacaagactcacccaagttgctcccaaaagactctccactcatgtgt 17762814  T
Q  99 ttctaaacctcatgaatctctttcg-aaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacc 196  Q
    |||  |||| |||||||||    |  |||||| ||||| ||| | | ||||| ||||||||||| |||||||||||||||||||||| |||| ||||||     
T  17762813 ttcccaaccccatgaatctaacccccaaaaggcaccaaaccttttcacaagagccccctctttt-ggttctccaagattcacatcttgaagccttgaact 17762715  T
Q  197 tcacccgaagaccctcaacctttagtatct 226  Q
    |||||| |||| ||||||||||||||||||    
T  17762714 tcacccaaagatcctcaacctttagtatct 17762685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 26800553 - 26800469
Alignment:
Q  141 tcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    |||||||| ||||||||||| |||| |||| ||| |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  26800553 tcccaagagccccctctttt-ggttatccatgatccacatcttgaagctttgaacctcacccaaagaccctcaacctttagtatct 26800469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 22425222 - 22425297
Alignment:
Q  150 ccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaacctttagtatct 226  Q
    ||||||||||| |||||||||||||||||||||| ||||| |||||| ||||| |||||||||||||||||||||||    
T  22425222 ccccctctttt-ggttctccaagattcacatcttgaagctctgaaccacacccaaagaccctcaacctttagtatct 22425297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 26830368 - 26830594
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaaga-tcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    |||||||||||| |||||||||||||||| | |||| |||||| ||||||| ||   |||||| ||||||||||| ||||| |||||| |  | || |||    
T  26830368 aagagaaccaacccttagcctttgatttcactaagaatcttctcttttggtttcacaagactcgcccaagttgctcacaaatgactctgcgctcatctgt 26830467  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctct-cccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| | || |||||| ||||||| | | |||||||  | |||||||| |||||||||||||||||||||| ||| ||| |||||    
T  26830468 ttcccaaccccatgaatct-tctccaaaaggcaccaacctttttcccaagagactcctctttt-ggttctccaagattcacatcttgaagttttaaacct 26830565  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
     || | |||||||||| |||||| |||||    
T  26830566 tactcaaagaccctcagcctttattatct 26830594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 217
Target Start/End: Complemental strand, 17757998 - 17757789
Alignment:
Q  11 actcttagcctttgatttccc-gaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtttctaaacct 108  Q
    ||||||||||||||||||| | || |||||||| |||| || ||   |||||||||||||||||| ||||| ||||||||  | || ||||||  ||||     
T  17757998 actcttagcctttgatttcactgatgatcttctctttttgtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttcccaaccc 17757899  T
Q  109 catgaatctctttcg-aaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaag 206  Q
    |||||||||    |  |||| | ||||||||| | | ||||| |||||| |||| |||||||||| ||||||||||| |||||||||| ||||||| |||    
T  17757898 catgaatctaacccccaaaatgcaccaacccttttcacaagagccccctatttt-ggttctccaacattcacatcttcaagctttgaatctcacccaaag 17757800  T
Q  207 accctcaacct 217  Q
    ||| |||||||    
T  17757799 accatcaacct 17757789  T

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Target: scaffold0286 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 11482 - 11256
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaa-gatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgt 98  Q
    ||||||| ||||  ||||||||||||||  | || |||||||| ||||||| ||   |||||||||||||||||| | ||| ||||||||  | || |||    
T  11482 aagagaaacaacctttagcctttgattttactaatgatcttctcttttggtttcacaagactcacccaagttgctcagaaatgactctccactcatgtgt 11383  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctccc-aagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    |||  |||| ||||||||| | || |||||| ||||||||| |||| |||| |||| |||||| |||||||||||||||||||||| |||||||||||||    
T  11382 ttcccaaccccatgaatct-tctccaaaaggcaccaaccctttccccaagagccccatctttt-ggttctccaagattcacatcttgaagctttgaacct 11285  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| |||||||||||||||||||||||    
T  11284 cacccaaagaccctcaacctttagtatct 11256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 80530 - 80753
Alignment:
Q  4 agaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcctttgatatgtttc 101  Q
    ||||||||| |||||||||||||||| | ||| |||| || |||| || |||  |||||||||||||||||| ||||| ||||||||  | || ||||||    
T  80530 agaaccaacccttagcctttgatttcactaaggatctactcttttagtttcccaagactcacccaagttgctcacaaaagactctccgctcatgtgtttc 80629  T
Q  102 taaacctcatgaatctctttcgaaaagggaccaaccctctccc-aagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcac 200  Q
      |||| ||||||||| |  | |||||| ||||||||| | |  |||| ||||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  80630 ccaaccccatgaatct-tccccaaaaggcaccaacccttttcataagagccccctctttt-ggttctccaagattcaaatcttgaagctttgaacctcac 80727  T
Q  201 ccgaagaccctcaacctttagtatct 226  Q
    || |||||||||||||| ||||||||    
T  80728 ccaaagaccctcaacctctagtatct 80753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 18245 - 18471
Alignment:
Q  1 aagagaaccaactcttagcctttgatttcccgaag-atcttctattttggtatccatagactcacccaagttgcttacaaaga-ctctcctttgatatgt 98  Q
    |||||||||||||||||| |||||||||| | ||| ||||||| ||||||| |    |||||||| ||||||||| ||||| | ||||||  | || |||    
T  18245 aagagaaccaactcttagtctttgatttcactaaggatcttctcttttggttttacaagactcactcaagttgctcacaaataactctccactcatgtgt 18344  T
Q  99 ttctaaacctcatgaatctctttcgaaaagggaccaaccctctcc-caagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacct 197  Q
    || | ||||||||||||||    | |||||| ||||||||| | | ||||| ||||||||||| | |||||||||||||||||||| |||||||||||||    
T  18345 tt-tcaacctcatgaatcttcccccaaaaggcaccaacccttttcacaagagccccctctttttg-ttctccaagattcacatcttgaagctttgaacct 18442  T
Q  198 cacccgaagaccctcaacctttagtatct 226  Q
    ||||| ||||||| |||||||||||||||    
T  18443 cacccaaagacccgcaacctttagtatct 18471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 226
Target Start/End: Original strand, 1671 - 1875
Alignment:
Q  21 tttgatttcccgaagatcttctattttggtatccatagactcacccaagttgcttacaaagactctcctttgatatgtttctaaacctcatgaatctctt 120  Q
    ||||||||||  | |||||||| ||||| | |||  |||||| ||||||||||| |||| ||||||| | |||| ||||||| |||  |||||||||||     
T  1671 tttgatttcctaaggatcttctcttttgatctcccaagactcgcccaagttgctcacaatgactctcatatgatgtgtttctcaactacatgaatctctc 1770  T
Q  121 tcgaaaagggaccaaccctctcccaagaaccccctcttttaggttctccaagattcacatcttaaagctttgaacctcacccgaagaccctcaaccttta 220  Q
       |||||  ||||| |||| |||||||  |||||||||| |||||| ||||||||||||||| |||||||| | ||||||| |||||| ||||||||||    
T  1771 cacaaaagacaccaagcctcgcccaagagtcccctctttt-ggttcttcaagattcacatcttgaagctttggagctcacccaaagaccttcaaccttta 1869  T
Q  221 gtatct 226  Q
    ||||||    
T  1870 gtatct 1875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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