View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11804_high_13 (Length: 292)
Name: NF11804_high_13
Description: NF11804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11804_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 46305799 - 46305524
Alignment:
| Q |
1 |
ctcaacttctccaacttactacacccaacagcaatcttggccaatccaatatccgttactcctaaacacttatccatattaatctccttcaacttcccac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46305799 |
ctcaacttctccaacttactacacccaacagcaatcttggccaatccaatatcagttactcctaaacacttatccatattaatctccttcaacttcccac |
46305700 |
T |
|
| Q |
101 |
cgcaagataacgcagctgcctctctatcaccaaaaccccaacaatgcgaaacatcaactgcttccaacaacggacaagccttaataaacatctccaaccc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
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| T |
46305699 |
cgcaagataacgcagctgcctctctatcaccaaaaccccaacaatgcgaaacatcaaccgcttccaacaacggacaagccttaatcaacatctccaaccc |
46305600 |
T |
|
| Q |
201 |
aacgtaccctaacccggtaactcgactcagtatcaatctcttgattcccagtgtccaactcgatgaccaatggttc |
276 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46305599 |
aacgtaccctaacccggtaactcgactcagtatcaatctcttgattcccagtgtccaactcgatgaccaatggttc |
46305524 |
T |
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