View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11804_high_4 (Length: 466)

Name: NF11804_high_4
Description: NF11804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11804_high_4
NF11804_high_4
[»] scaffold0083 (2 HSPs)
scaffold0083 (19-313)||(50501-50795)
scaffold0083 (344-451)||(50805-50912)
[»] chr3 (26 HSPs)
chr3 (86-294)||(10076299-10076505)
chr3 (345-448)||(10214799-10214903)
chr3 (345-448)||(10223540-10223644)
chr3 (346-448)||(10103863-10103966)
chr3 (223-387)||(11768325-11768494)
chr3 (79-162)||(10376658-10376741)
chr3 (80-162)||(10364611-10364693)
chr3 (356-448)||(10123663-10123755)
chr3 (356-448)||(10180317-10180409)
chr3 (356-448)||(10256432-10256524)
chr3 (223-302)||(10031125-10031204)
chr3 (223-308)||(9838029-9838114)
chr3 (223-308)||(9848907-9848992)
chr3 (356-408)||(10028802-10028854)
chr3 (223-308)||(9837824-9837907)
chr3 (223-308)||(9848702-9848785)
chr3 (223-308)||(10126060-10126145)
chr3 (223-302)||(10657930-10658006)
chr3 (223-308)||(10662639-10662721)
chr3 (223-284)||(10104042-10104100)
chr3 (223-262)||(10214934-10214972)
chr3 (223-262)||(10223675-10223713)
chr3 (223-302)||(10516630-10516706)
chr3 (223-258)||(10123754-10123790)
chr3 (223-258)||(10256523-10256559)
chr3 (233-289)||(10259874-10259930)
[»] chr5 (3 HSPs)
chr5 (345-448)||(26793382-26793486)
chr5 (368-448)||(26818898-26818979)
chr5 (223-262)||(26793517-26793555)


Alignment Details
Target: scaffold0083 (Bit Score: 271; Significance: 1e-151; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 19 - 313
Target Start/End: Original strand, 50501 - 50795
Alignment:
Q  19 ccatcttctagggatattgttaaaacaaaccaactagtatgaaattttgatggaaattacgagcaatgactcaaagaagagtcggttgtgaatgaatgga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50501 ccatcttctagggatattgttaaaacaaaccaactagtatgaaattttgatggaaattacgagcaatgactcaaagaagactcggttgtgaatgaatgga 50600  T
Q  119 taacactgacagtgctgtttttgaatggttggaagtgtatatagtaaaggtaaactcatgaagacttagctgtatgtgaattaatggttaacagtactgt 218  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50601 taacactgacagtgctgtttttgaatggttggaagtgcatatagtaaaggtaaactcatgaagacttagctgtatgtgaattaatggttaacagtactgt 50700  T
Q  219 atttaaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattgatacaatgaaaaaggaaaaattgcagtcac 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||||||||||||||||||    
T  50701 atttaaagctggaaagcaaagctcagcagtggttaatattggacccacatcccacaaaataattgatacaaagaaaaaggaaaaattgcagtcac 50795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 344 - 451
Target Start/End: Original strand, 50805 - 50912
Alignment:
Q  344 attatatatatttttacttttggtaagtgattcaaatatgcaatttctagttaaagtcctctcatatactaaaataaatgtatcatgttgtcatttttct 443  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  50805 attatatacatttttacttttggaaagtgattcaaatatgcaatttctagttaaactcctctcatatacgaaaataaatgtatcatgttgtcatttttct 50904  T
Q  444 tatcatct 451  Q
    ||||||||    
T  50905 tatcatct 50912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 6e-41; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 86 - 294
Target Start/End: Complemental strand, 10076505 - 10076299
Alignment:
Q  86 gactcaaagaagagtcggttgtgaatgaatggataacactgacagtgctgtttttgaatggttggaagtgtatatagtaaa-ggtaaactcatgaagact 184  Q
    ||||||||||||| ||| |||||||||||||||||||||| |||| ||||||||||| |||||||||||| |||| ||||| |||| ||||| |||||||    
T  10076505 gactcaaagaagactcgcttgtgaatgaatggataacactaacagcgctgtttttgagtggttggaagtgcatattgtaaagggtagactcaagaagact 10076406  T
Q  185 tagctgtatgtgaattaatggttaacagtactgtattt-aaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattg 283  Q
    ||  ||||||||||||||||   ||    ||   |||| |||||||||||| ||||||||| |||||||||||||||||| |||||  ||||||||||||    
T  10076405 tatatgtatgtgaattaatgaagaa----acaaaatttgaaagctggaaagtaaagctcagtagtggttaatattggacccacatcccacaaaataattg 10076310  T
Q  284 atacaatgaaa 294  Q
    |||||| ||||    
T  10076309 atacaaggaaa 10076299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 10214903 - 10214799
Alignment:
Q  345 ttatatatatttttacttttggtaagtgattcaaatatgcaatttctagttaaagtcctctcatatact-aaaataaatgtatcatgttgtcatttttct 443  Q
    ||||||| |||||||| || || |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  10214903 ttatatacatttttaccttaggaaagtgagtcaaatatgcaatttctagttaaagtcctctcatatactaaaaataaatgtatcatattgtcatttttct 10214804  T
Q  444 tatca 448  Q
    |||||    
T  10214803 tatca 10214799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 10223644 - 10223540
Alignment:
Q  345 ttatatatatttttacttttggtaagtgattcaaatatgcaatttctagttaaagtcctctcatatact-aaaataaatgtatcatgttgtcatttttct 443  Q
    ||||||| |||||||| || || |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  10223644 ttatatacatttttaccttaggaaagtgagtcaaatatgcaatttctagttaaagtcctctcatatactaaaaataaatgtatcatattgtcatttttct 10223545  T
Q  444 tatca 448  Q
    |||||    
T  10223544 tatca 10223540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 346 - 448
Target Start/End: Complemental strand, 10103966 - 10103863
Alignment:
Q  346 tatatatatttttacttttggtaagtgattcaaatatgcaatttctagttaaagtcctctcatatact-aaaataaatgtatcatgttgtcatttttctt 444  Q
    |||||| ||||||||||| || |||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||    
T  10103966 tatatacatttttactttaggaaagtgagtcaaatatgcaatttctagttaaattcctctcatatactaaaaataaatgtatcatattgtcatttttctt 10103867  T
Q  445 atca 448  Q
    ||||    
T  10103866 atca 10103863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 223 - 387
Target Start/End: Complemental strand, 11768494 - 11768325
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattgatacaatgaaaaaggaaaaattgca---gtcactaaaac 319  Q
    ||||| ||||||||||| ||| || |||||||||||||||| |||||  |||||||||||||||||| |||||||||||| |||||    | | ||||      
T  11768494 aaagcgggaaagcaaagttcaccattggttaatattggacctacatcccacaaaataattgatacaaagaaaaaggaaaagttgcacacttaattaaagg 11768395  T
Q  320 catcggaatc-ttaaatagcatata-attatatatatttttacttttggtaagtgattcaaatatgcaat 387  Q
    ||||| |||| |||||||||| |||  ||||||| |||||||||||||| ||||||||||||||||||||    
T  11768394 catcgaaatctttaaatagcagatactttatatacatttttacttttggaaagtgattcaaatatgcaat 11768325  T

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Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 10376658 - 10376741
Alignment:
Q  79 gagcaatgactcaaagaagagtcggttgtgaatgaatggataacactgacagtgctgtttttgaatggttggaagtgtatatag 162  Q
    |||||| ||||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  10376658 gagcaaagactcaaagaagactcgcttgtgagtgaatggataacactaacagtgctgtttttgaatggttggaagtgcatatag 10376741  T

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Target: chr3; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 10364611 - 10364693
Alignment:
Q  80 agcaatgactcaaagaagagtcggttgtgaatgaatggataacactgacagtgctgtttttgaatggttggaagtgtatatag 162  Q
    ||||| ||||||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  10364611 agcaaagactcaaagaagacttgcttgtgaatgaatggataacactaacagtgctgtttttgaatggttggaagtgcatatag 10364693  T

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Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 10123755 - 10123663
Alignment:
Q  356 tttacttttggtaagtgattcaaatatgcaatttctagttaaagtcctctcatatact-aaaataaatgtatcatgttgtcatttttcttatca 448  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||  |||||||||||||||||    
T  10123755 tttactttaggaaagtgattcaaatatgcaatttctcgttaaagtcctctcatatactaaaaataaatgtagcat-atgtcatttttcttatca 10123663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 10180409 - 10180317
Alignment:
Q  356 tttacttttggtaagtgattcaaatatgcaatttctagttaaagtcctctcatatact-aaaataaatgtatcatgttgtcatttttcttatca 448  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||  |||||||||||||||||    
T  10180409 tttactttaggaaagtgattcaaatatgcaatttctcgttaaagtcctctcatatactaaaaataaatgtagcat-atgtcatttttcttatca 10180317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 356 - 448
Target Start/End: Complemental strand, 10256524 - 10256432
Alignment:
Q  356 tttacttttggtaagtgattcaaatatgcaatttctagttaaagtcctctcatatact-aaaataaatgtatcatgttgtcatttttcttatca 448  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| |||  |||||||||||||||||    
T  10256524 tttactttaggaaagtgattcaaatatgcaatttctcgttaaagtcctctcatatactaaaaataaacgtagcat-atgtcatttttcttatca 10256432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 223 - 302
Target Start/End: Complemental strand, 10031204 - 10031125
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattgatacaatgaaaaaggaaaa 302  Q
    ||||||||||||||||||||| || || ||||||||||||| |||||   ||||||||||||||||| ||||||| ||||    
T  10031204 aaagctggaaagcaaagctcatcattgtttaatattggacccacatccctcaaaataattgatacaaagaaaaagaaaaa 10031125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 9838114 - 9838029
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattgatacaatgaaaaaggaaaaattgca 308  Q
    ||||||||||||||||||| | || || ||||||||||||| |||||   ||||||||||||||||| ||||||| |||| |||||    
T  9838114 aaagctggaaagcaaagcttaacattgtttaatattggacccacatccctcaaaataattgatacaaagaaaaagaaaaagttgca 9838029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 9848992 - 9848907
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattgatacaatgaaaaaggaaaaattgca 308  Q
    ||||||||||||||||||| | || || ||||||||||||| |||||   ||||||||||||||||| ||||||| |||| |||||    
T  9848992 aaagctggaaagcaaagcttaacattgtttaatattggacccacatccctcaaaataattgatacaaagaaaaagaaaaagttgca 9848907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 408
Target Start/End: Complemental strand, 10028854 - 10028802
Alignment:
Q  356 tttacttttggtaagtgattcaaatatgcaatttctagttaaagtcctctcat 408  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  10028854 tttactttaggaaagtgattcaaatatgcaatttctcgttaaagtcctctcat 10028802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 9837907 - 9837824
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattgatacaatgaaaaaggaaaaattgca 308  Q
    |||||||||||||||||||   || || ||||||||||||| |||||  |||||||||||||| ||| |||||||||||| |||||    
T  9837907 aaagctggaaagcaaagctt--cattgtttaatattggacccacatcccacaaaataattgatgcaaagaaaaaggaaaagttgca 9837824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 9848785 - 9848702
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattgatacaatgaaaaaggaaaaattgca 308  Q
    |||||||||||||||||||   || || ||||||||||||| |||||  |||||||||||||| ||| |||||||||||| |||||    
T  9848785 aaagctggaaagcaaagctt--cattgtttaatattggacccacatcccacaaaataattgatgcaaagaaaaaggaaaagttgca 9848702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 10126145 - 10126060
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattgatacaatgaaaaaggaaaaattgca 308  Q
    ||||||||||||||||| ||| || || ||||||||||||| |||||   ||||||||||||||||| | ||||| |||| |||||    
T  10126145 aaagctggaaagcaaaggtcatcattgtttaatattggacccacatccctcaaaataattgatacaaagcaaaagaaaaagttgca 10126060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 302
Target Start/End: Complemental strand, 10658006 - 10657930
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattgatacaatgaaaaaggaaaa 302  Q
    ||||||||||||||||| ||| ||||| |||||   ||||| ||||| | ||||||||||||||||| ||||||||||||    
T  10658006 aaagctggaaagcaaaggtcatcagtgattaat---ggacccacatccttcaaaataattgatacaaagaaaaaggaaaa 10657930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 10662721 - 10662639
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattgatacaatgaaaaaggaaaaattgca 308  Q
    ||||||||||||||||| ||| ||||| |||||   ||||| ||||| | |||||||||| |||||| |||||||||||| |||||    
T  10662721 aaagctggaaagcaaagttcatcagtgattaat---ggacccacatccttcaaaataattaatacaaagaaaaaggaaaagttgca 10662639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 10104100 - 10104042
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattga 284  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||  |||||||||||||    
T  10104100 aaagctggaaagcaaagctcagcagt-gttaatattggac--acatcccacaaaataattga 10104042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 10214972 - 10214934
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggac 262  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  10214972 aaagctggaaagcaaagctcagcagt-gttaatattggac 10214934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 10223713 - 10223675
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggac 262  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  10223713 aaagctggaaagcaaagctcagcagt-gttaatattggac 10223675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 302
Target Start/End: Complemental strand, 10516706 - 10516630
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggaccgacatcttacaaaataattgatacaatgaaaaaggaaaa 302  Q
    |||||||||||||| || ||| ||||| ||| |   ||||| ||||| | ||||||||||||||||| ||||||||||||    
T  10516706 aaagctggaaagcataggtcatcagtgattact---ggacccacatccttcaaaataattgatacaaagaaaaaggaaaa 10516630  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 10123790 - 10123754
Alignment:
Q  223 aaagctggaaagcaaa-gctcagcagtggttaatatt 258  Q
    |||||||||||||||| ||||||||||||||||||||    
T  10123790 aaagctggaaagcaaaagctcagcagtggttaatatt 10123754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 10256559 - 10256523
Alignment:
Q  223 aaagctggaaagcaaa-gctcagcagtggttaatatt 258  Q
    |||||||||||||||| ||||||||||||||||||||    
T  10256559 aaagctggaaagcaaaagctcagcagtggttaatatt 10256523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 10259930 - 10259874
Alignment:
Q  233 agcaaagctcagcagtggttaatattggaccgacatcttacaaaataattgatacaa 289  Q
    ||||||| ||| || || ||||||||||||| ||||| | |||||||||||||||||    
T  10259930 agcaaaggtcatcattgtttaatattggacccacatccttcaaaataattgatacaa 10259874  T

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Target: chr5 (Bit Score: 73; Significance: 4e-33; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 26793486 - 26793382
Alignment:
Q  345 ttatatatatttttacttttggtaagtgattcaaatatgcaatttctagttaaagtcctctcatatact-aaaataaatgtatcatgttgtcatttttct 443  Q
    ||||||| |||||||| || || |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  26793486 ttatatacatttttaccttaggaaagtgagtcaaatatgcaatttctagttaaagtcctctcatatactaaaaataaatgtatcatattgtcatttttct 26793387  T
Q  444 tatca 448  Q
    |||||    
T  26793386 tatca 26793382  T

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Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 368 - 448
Target Start/End: Complemental strand, 26818979 - 26818898
Alignment:
Q  368 aagtgattcaaatatgcaatttctagttaaagtcctctcatatact-aaaataaatgtatcatgttgtcatttttcttatca 448  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  26818979 aagtgagtcaaatatgcaatttctagttaaagtcctctcatatactaaaaataaatgtatcatattgtcatttttcttatca 26818898  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 26793555 - 26793517
Alignment:
Q  223 aaagctggaaagcaaagctcagcagtggttaatattggac 262  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  26793555 aaagctggaaagcaaagctcagcagt-gttaatattggac 26793517  T

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