View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11804_low_15 (Length: 286)
Name: NF11804_low_15
Description: NF11804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11804_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 46305857 - 46306126
Alignment:
| Q |
1 |
cttcgatttgaattttcttgatgtttcctatctcaaggtttgttactcatttgatttgtactcactatccttgtaaagttgttttacacattgtcatatc |
100 |
Q |
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| T |
46305857 |
cttcgatttgaattttcttgatgtttcctatctcaaggtttgttactcatttcatttgtactcactatccttgtaaagttattttacacattgtcatatc |
46305956 |
T |
|
| Q |
101 |
catttaaagatgtggcaagacatgattgaattctgcttaaactctaatggatgaatatatttgcaaacataattgtctnnnnnnnntgtcacctttagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |
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| T |
46305957 |
catttaaagatgtggcaagacatgattgaattctgcttaaactctaatgg----atatatttgcaaacataattgtctaaaaaaaatgtcacctttagtt |
46306052 |
T |
|
| Q |
201 |
tttgtttccagtgtaattttgtttatttagtaagattagtgttgttctttcttcatttataatttcttgttcat |
274 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
46306053 |
tttgtttccagtgtaattttgtttatttagtaagattagtgttgtcctttcttcatttataatttcttgttcat |
46306126 |
T |
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