View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11805_high_8 (Length: 289)
Name: NF11805_high_8
Description: NF11805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11805_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 7 - 271
Target Start/End: Complemental strand, 37070476 - 37070212
Alignment:
| Q |
7 |
acatccacaagagaggtaagtgtaattgattttgacaggtttggatttttagaagtttactattcaactcatttttaactaaaattaatcaggacaaaca |
106 |
Q |
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| T |
37070476 |
acatccacaagagaggtaagtgtaattgattttgacaggtttggatttttagaagtttactattcaactcatttttaactcaaattaatcaggacaaaca |
37070377 |
T |
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| Q |
107 |
aatttcgttgaacttaaaagagtttaagatcaggaccattcaccaagtgttctacaattgaatgatataaaattatttcaaacatatttacaatctttag |
206 |
Q |
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| T |
37070376 |
aatttcgttgaacttaaaagagtttaagatcaggaccattcaccaagtgttctacaattgaatgatataaaattatttcaaacatatttacaatctttag |
37070277 |
T |
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| Q |
207 |
ttttaggcctttatcttttttccttttatatatgacaaatagatgtaatgtttgcagcaacttac |
271 |
Q |
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| T |
37070276 |
ttttaggcctttatcttttttccttttatatatgacaaatagatgtaatgtttgcagcaacttac |
37070212 |
T |
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