View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11805_low_6 (Length: 412)

Name: NF11805_low_6
Description: NF11805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11805_low_6
NF11805_low_6
[»] chr5 (37 HSPs)
chr5 (17-396)||(30776286-30776662)
chr5 (3-43)||(18695318-18695358)
chr5 (3-45)||(9939463-9939505)
chr5 (3-44)||(22098254-22098295)
chr5 (4-45)||(42225798-42225839)
chr5 (3-43)||(1293117-1293157)
chr5 (1-45)||(3263537-3263581)
chr5 (5-45)||(6420670-6420710)
chr5 (1-45)||(9599757-9599801)
chr5 (5-45)||(31708368-31708408)
chr5 (4-43)||(2050927-2050966)
chr5 (4-43)||(14914372-14914411)
chr5 (1-44)||(30574406-30574449)
chr5 (5-44)||(42699056-42699095)
chr5 (5-43)||(7077375-7077413)
chr5 (4-42)||(8009904-8009942)
chr5 (1-43)||(9594478-9594520)
chr5 (3-41)||(14321986-14322024)
chr5 (6-44)||(16143389-16143427)
chr5 (3-45)||(16690497-16690539)
chr5 (9-43)||(19271859-19271893)
chr5 (1-43)||(28501592-28501634)
chr5 (3-45)||(38293390-38293432)
chr5 (6-44)||(41210536-41210574)
chr5 (4-45)||(27440477-27440518)
chr5 (4-45)||(39788738-39788779)
chr5 (4-45)||(43441736-43441777)
chr5 (3-43)||(4088443-4088483)
chr5 (5-45)||(12718413-12718453)
chr5 (5-45)||(12779639-12779679)
chr5 (3-43)||(14011317-14011357)
chr5 (5-45)||(15639383-15639423)
chr5 (4-44)||(22920524-22920564)
chr5 (5-45)||(32873182-32873222)
chr5 (5-45)||(34381010-34381050)
chr5 (2-42)||(41173253-41173293)
chr5 (5-45)||(41460114-41460154)
[»] chr7 (35 HSPs)
chr7 (5-43)||(49128723-49128761)
chr7 (1-44)||(33050182-33050225)
chr7 (1-45)||(29763828-29763872)
chr7 (3-43)||(36352618-36352658)
chr7 (3-43)||(46260123-46260163)
chr7 (3-43)||(46829479-46829519)
chr7 (1-44)||(2347088-2347131)
chr7 (5-44)||(39369301-39369340)
chr7 (4-43)||(47530323-47530362)
chr7 (5-43)||(4971290-4971328)
chr7 (5-43)||(6822555-6822593)
chr7 (5-43)||(19426580-19426618)
chr7 (5-43)||(24700121-24700159)
chr7 (5-43)||(25940665-25940703)
chr7 (1-43)||(30864446-30864488)
chr7 (1-43)||(44511139-44511181)
chr7 (3-36)||(1471322-1471355)
chr7 (3-44)||(34108886-34108927)
chr7 (1-42)||(37325848-37325889)
chr7 (6-43)||(37856188-37856225)
chr7 (6-43)||(39875832-39875869)
chr7 (2-43)||(41750115-41750156)
chr7 (5-42)||(46725618-46725655)
chr7 (5-45)||(6427208-6427248)
chr7 (3-43)||(9363387-9363427)
chr7 (1-45)||(11789720-11789764)
chr7 (1-45)||(19880260-19880304)
chr7 (1-45)||(30538624-30538668)
chr7 (5-45)||(33212040-33212080)
chr7 (3-43)||(34507237-34507277)
chr7 (5-45)||(34654565-34654605)
chr7 (1-45)||(37969929-37969973)
chr7 (3-43)||(39497333-39497373)
chr7 (5-45)||(41080124-41080164)
chr7 (3-43)||(42584802-42584842)
[»] chr3 (39 HSPs)
chr3 (3-45)||(29573387-29573429)
chr3 (1-45)||(48944739-48944783)
chr3 (1-44)||(11327107-11327150)
chr3 (5-43)||(36907048-36907086)
chr3 (2-43)||(48405410-48405451)
chr3 (3-43)||(37894274-37894314)
chr3 (3-43)||(48287671-48287711)
chr3 (3-43)||(52963347-52963387)
chr3 (5-44)||(462434-462473)
chr3 (4-43)||(27162501-27162540)
chr3 (1-44)||(42643234-42643277)
chr3 (3-42)||(47101523-47101562)
chr3 (1-44)||(54233497-54233540)
chr3 (1-43)||(8254027-8254069)
chr3 (5-43)||(11335335-11335373)
chr3 (3-45)||(14207289-14207331)
chr3 (3-45)||(14215037-14215079)
chr3 (6-44)||(30580132-30580170)
chr3 (1-43)||(32931947-32931989)
chr3 (5-43)||(34271523-34271561)
chr3 (1-43)||(36818956-36818998)
chr3 (5-43)||(43169775-43169813)
chr3 (3-45)||(48352994-48353036)
chr3 (1-43)||(49761215-49761257)
chr3 (5-43)||(51032657-51032695)
chr3 (4-45)||(2482706-2482747)
chr3 (6-43)||(21579114-21579151)
chr3 (3-40)||(26452754-26452791)
chr3 (4-45)||(37988630-37988671)
chr3 (6-43)||(47683801-47683838)
chr3 (6-43)||(49196696-49196733)
chr3 (5-45)||(14957834-14957874)
chr3 (3-43)||(16479632-16479671)
chr3 (3-43)||(19150350-19150390)
chr3 (5-45)||(31017427-31017467)
chr3 (1-41)||(38471644-38471684)
chr3 (1-45)||(50280116-50280160)
chr3 (5-45)||(51464305-51464345)
chr3 (4-44)||(53718048-53718088)
[»] chr4 (48 HSPs)
chr4 (4-45)||(18568847-18568888)
chr4 (5-43)||(47998594-47998632)
chr4 (3-44)||(3078939-3078980)
chr4 (5-45)||(925095-925135)
chr4 (5-45)||(3968883-3968923)
chr4 (3-43)||(32696820-32696860)
chr4 (3-43)||(34995320-34995360)
chr4 (3-43)||(37514163-37514203)
chr4 (5-45)||(39010170-39010210)
chr4 (3-43)||(42815404-42815444)
chr4 (3-43)||(47288082-47288122)
chr4 (4-44)||(48099810-48099850)
chr4 (3-43)||(51359821-51359861)
chr4 (1-44)||(3475868-3475911)
chr4 (1-44)||(7037513-7037556)
chr4 (4-43)||(35824138-35824177)
chr4 (5-44)||(51389107-51389146)
chr4 (5-43)||(169535-169573)
chr4 (5-43)||(1562569-1562607)
chr4 (1-43)||(1796366-1796408)
chr4 (1-43)||(5208356-5208398)
chr4 (1-43)||(8026782-8026824)
chr4 (5-43)||(11546935-11546973)
chr4 (6-44)||(32365690-32365728)
chr4 (1-43)||(35037609-35037651)
chr4 (6-44)||(45286149-45286187)
chr4 (5-43)||(49424853-49424891)
chr4 (4-42)||(51891469-51891507)
chr4 (1-43)||(53662457-53662499)
chr4 (1-43)||(55268030-55268072)
chr4 (3-44)||(1796013-1796054)
chr4 (4-45)||(8810569-8810610)
chr4 (7-44)||(30042133-30042170)
chr4 (5-46)||(36123493-36123534)
chr4 (4-45)||(36812435-36812476)
chr4 (6-43)||(54036552-54036589)
chr4 (7-43)||(6290462-6290498)
chr4 (3-43)||(15522354-15522394)
chr4 (5-45)||(23220333-23220373)
chr4 (5-45)||(25725727-25725767)
chr4 (5-45)||(26885289-26885329)
chr4 (6-42)||(28676175-28676211)
chr4 (4-40)||(47519752-47519788)
chr4 (2-46)||(51160667-51160711)
chr4 (5-45)||(51224871-51224911)
chr4 (3-43)||(51377324-51377364)
chr4 (3-43)||(53463101-53463141)
chr4 (3-43)||(55609197-55609236)
[»] chr8 (28 HSPs)
chr8 (3-43)||(10644833-10644873)
chr8 (4-44)||(35937544-35937584)
chr8 (5-43)||(6849294-6849332)
chr8 (3-45)||(25830277-25830319)
chr8 (3-43)||(67192-67232)
chr8 (5-44)||(38844823-38844862)
chr8 (6-44)||(1370308-1370346)
chr8 (1-43)||(5742686-5742728)
chr8 (1-43)||(20288533-20288575)
chr8 (1-43)||(21075162-21075204)
chr8 (1-43)||(41293750-41293792)
chr8 (1-42)||(1268804-1268845)
chr8 (7-40)||(4169751-4169784)
chr8 (2-43)||(5771906-5771947)
chr8 (3-44)||(7795336-7795377)
chr8 (2-43)||(12655922-12655963)
chr8 (4-45)||(13884314-13884355)
chr8 (6-43)||(16699602-16699639)
chr8 (7-44)||(21273745-21273782)
chr8 (2-43)||(21526311-21526352)
chr8 (5-45)||(20473777-20473817)
chr8 (1-45)||(21649197-21649241)
chr8 (5-45)||(22767130-22767170)
chr8 (5-45)||(31806297-31806337)
chr8 (3-43)||(33100500-33100540)
chr8 (3-43)||(35067160-35067200)
chr8 (4-40)||(42130999-42131035)
chr8 (3-43)||(42620008-42620048)
[»] chr6 (24 HSPs)
chr6 (3-43)||(25127864-25127904)
chr6 (1-43)||(3339528-3339570)
chr6 (5-44)||(29376748-29376787)
chr6 (1-43)||(2056783-2056825)
chr6 (5-43)||(8778905-8778943)
chr6 (5-43)||(9188977-9189015)
chr6 (5-43)||(26391318-26391356)
chr6 (5-43)||(28965873-28965911)
chr6 (3-44)||(1376363-1376404)
chr6 (3-44)||(1384111-1384152)
chr6 (3-40)||(3552185-3552222)
chr6 (3-44)||(11013996-11014037)
chr6 (6-43)||(16328724-16328761)
chr6 (2-43)||(17181966-17182007)
chr6 (2-43)||(27334858-27334899)
chr6 (2-43)||(27395598-27395639)
chr6 (6-43)||(30945823-30945860)
chr6 (5-42)||(32621802-32621839)
chr6 (3-40)||(34570626-34570663)
chr6 (3-43)||(15368854-15368894)
chr6 (10-42)||(16352187-16352219)
chr6 (4-40)||(20029264-20029300)
chr6 (1-45)||(25995440-25995484)
chr6 (1-45)||(26094903-26094947)
[»] chr1 (35 HSPs)
chr1 (3-43)||(21433432-21433472)
chr1 (1-43)||(12999851-12999893)
chr1 (5-43)||(30530607-30530645)
chr1 (5-42)||(18959005-18959042)
chr1 (6-43)||(34974783-34974820)
chr1 (3-44)||(49020435-49020476)
chr1 (3-43)||(740987-741027)
chr1 (5-44)||(9445107-9445146)
chr1 (5-44)||(25098821-25098860)
chr1 (4-43)||(26501295-26501334)
chr1 (4-43)||(48872982-48873021)
chr1 (5-43)||(18541084-18541122)
chr1 (5-43)||(25989017-25989055)
chr1 (1-43)||(27787489-27787531)
chr1 (5-43)||(33076119-33076157)
chr1 (1-43)||(35972833-35972875)
chr1 (6-44)||(41507217-41507255)
chr1 (1-43)||(42256460-42256502)
chr1 (6-44)||(47059913-47059951)
chr1 (3-45)||(49931551-49931593)
chr1 (6-43)||(9011645-9011682)
chr1 (6-43)||(19427521-19427558)
chr1 (2-43)||(19651410-19651451)
chr1 (6-43)||(27687542-27687579)
chr1 (5-46)||(32821632-32821673)
chr1 (6-43)||(40596077-40596114)
chr1 (6-43)||(47386828-47386865)
chr1 (6-42)||(8959240-8959276)
chr1 (3-43)||(11947795-11947835)
chr1 (3-43)||(26501511-26501550)
chr1 (4-44)||(28501446-28501486)
chr1 (7-43)||(40612114-40612150)
chr1 (13-45)||(49621361-49621393)
chr1 (5-41)||(50035570-50035606)
chr1 (5-41)||(51339733-51339769)
[»] chr2 (25 HSPs)
chr2 (4-43)||(5031923-5031962)
chr2 (5-44)||(34134804-34134843)
chr2 (1-43)||(44484685-44484727)
chr2 (4-45)||(40874293-40874334)
chr2 (3-43)||(6336252-6336292)
chr2 (1-45)||(30487498-30487542)
chr2 (6-45)||(7121388-7121427)
chr2 (5-40)||(19529545-19529580)
chr2 (2-45)||(35334518-35334561)
chr2 (4-43)||(36909875-36909914)
chr2 (4-43)||(37966585-37966624)
chr2 (5-43)||(1052529-1052567)
chr2 (5-43)||(11980651-11980689)
chr2 (5-43)||(16754396-16754434)
chr2 (5-43)||(31635843-31635881)
chr2 (1-46)||(5852471-5852516)
chr2 (3-40)||(14500923-14500960)
chr2 (3-44)||(28277798-28277839)
chr2 (6-43)||(29795447-29795484)
chr2 (5-45)||(6639505-6639545)
chr2 (1-45)||(11728150-11728194)
chr2 (4-44)||(15123968-15124008)
chr2 (5-41)||(17267685-17267721)
chr2 (3-43)||(24766152-24766192)
chr2 (5-45)||(28165127-28165167)
[»] scaffold0184 (1 HSPs)
scaffold0184 (5-43)||(16627-16665)
[»] scaffold0078 (1 HSPs)
scaffold0078 (5-43)||(56179-56217)
[»] scaffold0049 (1 HSPs)
scaffold0049 (5-43)||(72202-72240)
[»] scaffold0019 (1 HSPs)
scaffold0019 (4-43)||(72366-72405)
[»] scaffold0252 (1 HSPs)
scaffold0252 (4-40)||(8007-8043)
[»] scaffold0085 (1 HSPs)
scaffold0085 (4-40)||(31330-31366)
[»] scaffold0020 (1 HSPs)
scaffold0020 (5-45)||(155904-155944)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-45)||(18593-18637)
[»] scaffold0003 (1 HSPs)
scaffold0003 (3-43)||(366294-366333)


Alignment Details
Target: chr5 (Bit Score: 268; Significance: 1e-149; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 17 - 396
Target Start/End: Complemental strand, 30776662 - 30776286
Alignment:
Q  17 aaaatggttgtataaatatcatttctcaaggtttttaaaccgaaagtatgtgtgagtgtgtctga------attccaatttttatataaaaatggttaaa 110  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||      |||||||||||||||||||||||||||||    
T  30776662 aaaatggttgtataaatatcatttctcaaggttt--aaactgaaagtatgtgtgagtgtgtctgatcgtgaattccaatttttatataaaaatggttaaa 30776565  T
Q  111 ttttggttatagttgtttttgttgacattcttattattgcaagaaagaaatcatctataagtgtatatgatgtggcggtaagcacttaccgattgcaatt 210  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30776564 ttttggttacagttgtttttgttgacattcttattattgcaagaaa----tcatctataagtgtatatgatgtggcggtaagcacttaccgattgcaatt 30776469  T
Q  211 taaaatgcattattgcctatttctcttaacttttccagcattgatattagtcaatgtgatattgagattgctagaannnnnnnnnatgtttcagtttagg 310  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||    
T  30776468 taaaatgcattattgcctatttctc-taacttttccagcattgatattagtcaatgtgatattgagattgctaga--gattttttatgtttcagtttagg 30776372  T
Q  311 cttgttatggtgatatattagtgaaaccttccaaccatagaattgatttctaatctttgattcacaaagccgagttaggtaacatc 396  Q
    |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30776371 cttgttatggtgatgtattattgaaacattccaaccatagaattgatttctaatctttgattcacaaagctgagttaggtaacatc 30776286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 18695358 - 18695318
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  18695358 acaaaagttgttacaaaatggttgtacaaatatcatttctc 18695318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 9939463 - 9939505
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  9939463 acaaaacttgttacaaaatggtagtataaatatcatttctcaa 9939505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 22098295 - 22098254
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  22098295 acaaaagttgttagaaaatggttgtacaaatatcatttctca 22098254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 42225798 - 42225839
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  42225798 caaaagttgttacaaaatggttttacaaatatcatttctcaa 42225839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 1293117 - 1293157
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  1293117 acaaaagttgttaaaaaatggttgtacaaatatcatttctc 1293157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3263537 - 3263581
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||    
T  3263537 gtacaaaagttgtcacaaattggttgtacaaatatcatttctcaa 3263581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 6420710 - 6420670
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  6420710 aaaagttgtcacaaaatggttgtagaaatatcatttctcaa 6420670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9599757 - 9599801
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||    
T  9599757 gtacaaaagttgtcacaaattggttgtacaaatatcatttctcaa 9599801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 31708408 - 31708368
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  31708408 aaaagttgttataaaatggttgtacaaatatcatttctcaa 31708368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 2050966 - 2050927
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  2050966 caaaaattgttacaaaatggttgtacaaatatcatttctc 2050927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 14914411 - 14914372
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  14914411 caaaagttgtcacaaaatggttgtacaaatatcatttctc 14914372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30574406 - 30574449
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||    
T  30574406 gtacaaaagttgtcacaaattggttgtacaaatatcatttctca 30574449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 42699095 - 42699056
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  42699095 aaaagttgtcacaaaatggttgtacaaatatcatttctca 42699056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 7077375 - 7077413
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  7077375 aaaagttgtaacaaaatggttgtacaaatatcatttctc 7077413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 8009942 - 8009904
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttct 42  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  8009942 caaaagttgtaagaaaatggttgtataaatatcatttct 8009904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9594520 - 9594478
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  9594520 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 9594478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 14321986 - 14322024
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttc 41  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  14321986 acaaaagttgttagaaaatggttgtacaaatatcatttc 14322024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 16143427 - 16143389
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  16143427 aaagttgtcacaaaatggttgtacaaatatcatttctca 16143389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 16690539 - 16690497
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||||  ||||||||||| ||||||||||||||||    
T  16690539 acaaaagttgttaagaaatggttgtacaaatatcatttctcaa 16690497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 19271893 - 19271859
Alignment:
Q  9 gttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||| ||||||||||||||    
T  19271893 gttgttacaaaatggttgtacaaatatcatttctc 19271859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28501634 - 28501592
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||| |||||||||||||| ||||||||||||||    
T  28501634 gtacaaaaattgtcacaaaatggttgtacaaatatcatttctc 28501592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 38293390 - 38293432
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||| |||||| |||||||||||| ||||||||||||||||    
T  38293390 acaaaaattgttataaaatggttgtaaaaatatcatttctcaa 38293432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 41210536 - 41210574
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||||| || |||||||||||||||||||||||||    
T  41210536 aaagttgttaaaatatggttgtataaatatcatttctca 41210574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 27440518 - 27440477
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||| |||||||| ||||| ||||||||||||||||    
T  27440518 caaaagttgtcacaaaatgattgtacaaatatcatttctcaa 27440477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 39788738 - 39788779
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||| ||| |||||||||| ||||||||||||||||    
T  39788738 caaaagttgtcacataatggttgtacaaatatcatttctcaa 39788779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 43441777 - 43441736
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||||||||||| |||  ||||||||||||||||    
T  43441777 caaaagttgttacaaaatggatgttcaaatatcatttctcaa 43441736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 4088483 - 4088443
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||||| |||| ||||||||||||||    
T  4088483 acaaaagttgttataaaatggatgtacaaatatcatttctc 4088443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 12718413 - 12718453
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| ||||| |||||||| ||||||||||||||||    
T  12718413 aaaagttgtcacaaattggttgtacaaatatcatttctcaa 12718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 12779639 - 12779679
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| ||||| |||||||| ||||||||||||||||    
T  12779639 aaaagttgtcacaaattggttgtacaaatatcatttctcaa 12779679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 14011357 - 14011317
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||| ||||  ||||||||||||||    
T  14011357 acaaaagttgttacaaaatgattgttcaaatatcatttctc 14011317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 15639423 - 15639383
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| || ||||||||||| ||||||||||||||||    
T  15639423 aaaagttgtcaccaaatggttgtacaaatatcatttctcaa 15639383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 22920524 - 22920564
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||| ||||||||||||||||||| |||||| ||||||||    
T  22920524 caaaatttgttacaaaatggttgtacaaatattatttctca 22920564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 32873182 - 32873222
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||| ||| |||||||| ||||||||||||||||    
T  32873182 aaaagttgttagaaattggttgtacaaatatcatttctcaa 32873222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 34381050 - 34381010
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| ||||| |||||||| ||||||||||||||||    
T  34381050 aaaagttgtcacaaagtggttgtacaaatatcatttctcaa 34381010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 41173293 - 41173253
Alignment:
Q  2 tacaaaagttgttacaaaatggttgtataaatatcatttct 42  Q
    |||||||||||| ||||||||| ||| ||||||||||||||    
T  41173293 tacaaaagttgtcacaaaatggatgtttaaatatcatttct 41173253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 41460154 - 41460114
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| | |||||| ||||||||||||||||||||||    
T  41460154 aaaagttgtcaaaaaatgattgtataaatatcatttctcaa 41460114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 49128761 - 49128723
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49128761 aaaagttgttacaaaatggttgtataaatatcatttctc 49128723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33050225 - 33050182
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| |||||||||||||| |||||||||||||||    
T  33050225 gtacaaaagttgtcacaaaatggttgtacaaatatcatttctca 33050182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29763872 - 29763828
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||    
T  29763872 gtacaaaagttatcacaaaatggttgtacaaatatcatttctcaa 29763828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 36352618 - 36352658
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  36352618 acaaaagttgttacaaaatggttgtacatatatcatttctc 36352658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 46260123 - 46260163
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||  |||||||||||||||||||||||||||    
T  46260123 acaaaagttgttttaaaatggttgtataaatatcatttctc 46260163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 46829519 - 46829479
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  46829519 acaaaaattgttacaaaatggttgtacaaatatcatttctc 46829479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2347088 - 2347131
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||| |||||||| |||||||||||||| |||||||||||||||    
T  2347088 gtaccaaagttgtcacaaaatggttgtacaaatatcatttctca 2347131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 39369340 - 39369301
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  39369340 aaaagttgttacaaaagggttgtacaaatatcatttctca 39369301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 47530323 - 47530362
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  47530323 caaaagttgtcataaaatggttgtataaatatcatttctc 47530362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 4971328 - 4971290
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  4971328 aaaagttgtcacaaaatggttgtacaaatatcatttctc 4971290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 6822555 - 6822593
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  6822555 aaaagttgttagaaaatggttgtacaaatatcatttctc 6822593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 19426618 - 19426580
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  19426618 aaaagttgtcacaaaatggttgtacaaatatcatttctc 19426580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 24700159 - 24700121
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  24700159 aaaagttgttacaaaatgattgtacaaatatcatttctc 24700121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 25940665 - 25940703
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  25940665 aaaaattgttacaaaatggttgtacaaatatcatttctc 25940703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30864446 - 30864488
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  30864446 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 30864488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44511181 - 44511139
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||||||||||||  |||||||||||||    
T  44511181 gtacaaaagttgtcacaaaatggttgtacgaatatcatttctc 44511139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 1471322 - 1471355
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatc 36  Q
    |||||||||||||||||||||||||| |||||||    
T  1471322 acaaaagttgttacaaaatggttgtacaaatatc 1471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 34108886 - 34108927
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| |||||||||||| | |||||||||||||    
T  34108886 acaaaagttgttagaaaatggttgtacatatatcatttctca 34108927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37325848 - 37325889
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttct 42  Q
    ||||||||||||| ||||| |||||||| |||||||||||||    
T  37325848 gtacaaaagttgtcacaaattggttgtacaaatatcatttct 37325889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 37856188 - 37856225
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  37856188 aaagttgtcacaaaatggttgtacaaatatcatttctc 37856225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 39875832 - 39875869
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  39875832 aaagttgttaaaaagtggttgtataaatatcatttctc 39875869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 41750156 - 41750115
Alignment:
Q  2 tacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||  ||||||||||| |||||||||||||||    
T  41750156 tacaaaagttgtttaaaaatggttgtttaaatatcatttctc 41750115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 46725655 - 46725618
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttct 42  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  46725655 aaaagttgtcacaaaatagttgtataaatatcatttct 46725618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 6427248 - 6427208
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| | ||| |||||||||||||||||||||||||    
T  6427248 aaaagttgtcaaaaagtggttgtataaatatcatttctcaa 6427208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 9363427 - 9363387
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  9363427 acaaaagttgttataaaatgattgtacaaatatcatttctc 9363387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11789720 - 11789764
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||||   |||||||||||| ||||||||||||||||    
T  11789720 gtacaaaagttgtactaaaatggttgtacaaatatcatttctcaa 11789764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19880260 - 19880304
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||||| ||||| |||||||| ||| ||||||||||||    
T  19880260 gtacaaaagttgtcacaaattggttgtacaaacatcatttctcaa 19880304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30538668 - 30538624
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||||  |||||| |||||| ||||||||||||||||    
T  30538668 gtacaaaagttgtaccaaaattgttgtacaaatatcatttctcaa 30538624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 33212080 - 33212040
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||| |||||| |||||||||||| ||||||||||||||||    
T  33212080 aaaaattgttagaaaatggttgtacaaatatcatttctcaa 33212040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 34507237 - 34507277
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||    
T  34507237 acaaaagttgttagaaaattgttgtatatatatcatttctc 34507277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 34654605 - 34654565
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||| ||| |||||||| ||||||||||||||||||||||    
T  34654605 aaaagatgtcacaaaatgattgtataaatatcatttctcaa 34654565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37969973 - 37969929
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||||  |||||| |||||| ||||||||||||||||    
T  37969973 gtacaaaagttgtatcaaaatagttgtacaaatatcatttctcaa 37969929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 39497333 - 39497373
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||| ||||||| |||||||||||| ||||||||||||||    
T  39497333 acaaaggttgttaaaaaatggttgtacaaatatcatttctc 39497373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 41080164 - 41080124
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| |||||||| ||||| ||||||||||||||||    
T  41080164 aaaagttgtcacaaaatgattgtacaaatatcatttctcaa 41080124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 42584842 - 42584802
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||| | ||||||||||||    
T  42584842 acaaaagttgttagaaaatggttgtacatatatcatttctc 42584802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 29573387 - 29573429
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  29573387 acaaaagttgttacaaaatggttgtacaaatatcatttctcaa 29573429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48944739 - 48944783
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||    
T  48944739 gtacaaaagttgttagaaaatggttgtacaaatatcatttctcaa 48944783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11327150 - 11327107
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| |||||||||||||| |||||||||||||||    
T  11327150 gtacaaaagttgtcacaaaatggttgtacaaatatcatttctca 11327107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 36907086 - 36907048
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  36907086 aaaagttgttataaaatggttgtataaatatcatttctc 36907048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 48405451 - 48405410
Alignment:
Q  2 tacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  48405451 tacaaaagttgtcacaaaatggttgtacaaatatcatttctc 48405410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 37894274 - 37894314
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  37894274 acaaaagttgttagaaaatggttgtacaaatatcatttctc 37894314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 48287711 - 48287671
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  48287711 acaaaagttgttataaaatggttgtacaaatatcatttctc 48287671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 52963347 - 52963387
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  52963347 acaaaagttgttaaaaaatggttgtacaaatatcatttctc 52963387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 462434 - 462473
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  462434 aaaagttgtcacaaaatggttgtacaaatatcatttctca 462473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 27162501 - 27162540
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  27162501 caaaagttgttacaaaatggttgtacaaatatcacttctc 27162540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42643277 - 42643234
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||||||||| |||| |||||||| |||||||||||||||    
T  42643277 gtacaaaagttgttccaaattggttgtacaaatatcatttctca 42643234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 47101562 - 47101523
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttct 42  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  47101562 acaaaagttgtcacaaaatggttgtacaaatatcatttct 47101523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 54233497 - 54233540
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| | |||||||||||| |||||||||||||||    
T  54233497 gtacaaaagttgtaaaaaaatggttgtacaaatatcatttctca 54233540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8254069 - 8254027
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||| |||||||| |||||||||||||| ||||||||||||||    
T  8254069 gtaccaaagttgtcacaaaatggttgtacaaatatcatttctc 8254027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 11335335 - 11335373
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  11335335 aaaagttgttagaaaatggttgtacaaatatcatttctc 11335373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 14207289 - 14207331
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||||||||||| |||||  ||||||||||||||||    
T  14207289 acaaaagttgttacaaaatcgttgttcaaatatcatttctcaa 14207331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 14215037 - 14215079
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||||||||||| |||||  ||||||||||||||||    
T  14215037 acaaaagttgttacaaaatcgttgttcaaatatcatttctcaa 14215079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 30580170 - 30580132
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  30580170 aaagttgtcataaaatggttgtataaatatcatttctca 30580132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32931947 - 32931989
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  32931947 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 32931989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 34271523 - 34271561
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  34271523 aaaagttgttacaaagtggttgtacaaatatcatttctc 34271561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36818998 - 36818956
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  36818998 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 36818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 43169775 - 43169813
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  43169775 aaaagttgtcacaaaatggttgtacaaatatcatttctc 43169813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 48353036 - 48352994
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||    
T  48353036 acaaaagttgttaaaaaatggatgtacaaatatcatttctcaa 48352994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 49761215 - 49761257
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||| |||||||||||| ||||||||||||||    
T  49761215 gtacaaaaattgttagaaaatggttgtacaaatatcatttctc 49761257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 51032657 - 51032695
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  51032657 aaaagttgttagaaaatggttgtacaaatatcatttctc 51032695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 2482706 - 2482747
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||| ||||||||| |||| ||||||||||||||||    
T  2482706 caaaagttgtcacaaaatggatgtacaaatatcatttctcaa 2482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 21579151 - 21579114
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  21579151 aaagttgttagaaattggttgtataaatatcatttctc 21579114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 26452754 - 26452791
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcattt 40  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  26452754 acaaaagttgttagaaaatggttgtatatatatcattt 26452791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 37988671 - 37988630
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||| ||||||| ||| |||||||||||||||||||    
T  37988671 caaaagttgtcacaaaatagttatataaatatcatttctcaa 37988630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 47683838 - 47683801
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  47683838 aaagttgtcacaaaatggttgtacaaatatcatttctc 47683801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 49196733 - 49196696
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  49196733 aaagttgtcacaaaatggttgtacaaatatcatttctc 49196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 14957874 - 14957834
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| ||||| |||||||| ||||||||||||||||    
T  14957874 aaaagttgtcacaaagtggttgtacaaatatcatttctcaa 14957834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 16479671 - 16479632
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  16479671 acaaaagttgt-acaaaatggttgtacaaatatcatttctc 16479632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 19150350 - 19150390
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  19150350 acaaaagttgttaaaaaatgattgtacaaatatcatttctc 19150390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 31017427 - 31017467
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||| |||||| ||||| ||||||||||||||||    
T  31017427 aaaagttgttagaaaatgattgtacaaatatcatttctcaa 31017467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38471684 - 38471644
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttc 41  Q
    |||||||||||||  ||||||||||||| ||||||||||||    
T  38471684 gtacaaaagttgtaccaaaatggttgtacaaatatcatttc 38471644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 50280116 - 50280160
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||||| | | |||||||||| ||||||||||||||||    
T  50280116 gtacaaaagttgtcatagaatggttgtacaaatatcatttctcaa 50280160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 51464305 - 51464345
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| ||||| |||||||| ||||||||||||||||    
T  51464305 aaaagttgtcacaaagtggttgtacaaatatcatttctcaa 51464345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 53718088 - 53718048
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||||| ||||||||| ||| ||||||||||||||||    
T  53718088 caaaagttgtcacaaaatggatgtttaaatatcatttctca 53718048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 18568847 - 18568888
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  18568847 caaaagttgtcacaaaatggttgtataaatatcatttctcaa 18568888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 47998632 - 47998594
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  47998632 aaaagttgttacaaaatggttgtacaaatatcatttctc 47998594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 3078939 - 3078980
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  3078939 acaaaagttgttacaaaatgattgtacaaatatcatttctca 3078980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 925095 - 925135
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| |||||||||||||||||||||||||| ||||    
T  925095 aaaagttgtcacaaaatggttgtataaatatcatttatcaa 925135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 3968923 - 3968883
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  3968923 aaaagttgttagaaaatggttgtacaaatatcatttctcaa 3968883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 32696820 - 32696860
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  32696820 acaaaagttgttagaaaatggttgtacaaatatcatttctc 32696860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 34995360 - 34995320
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  34995360 acaaaagttgttacaaaatggttgtacaaatataatttctc 34995320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 37514163 - 37514203
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  37514163 acaaaagttgttacaaaatggatgtacaaatatcatttctc 37514203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 39010170 - 39010210
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  39010170 aaaagttgtcacaaaatggttgtacaaatatcatttctcaa 39010210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 42815444 - 42815404
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  42815444 acaaaagttgttacaaaatagttgtacaaatatcatttctc 42815404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 47288122 - 47288082
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  47288122 acaaaaattgttacaaaatggttgtacaaatatcatttctc 47288082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 48099850 - 48099810
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  48099850 caaaagttgtcacaaagtggttgtataaatatcatttctca 48099810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 51359821 - 51359861
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  51359821 acaaaagttgtcacaaaatggttgtacaaatatcatttctc 51359861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3475911 - 3475868
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| | |||||||||||| |||||||||||||||    
T  3475911 gtacaaaagttgtcataaaatggttgtacaaatatcatttctca 3475868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7037513 - 7037556
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||    
T  7037513 gtacaaaagttgtcacaaattggttgtacaaatatcatttctca 7037556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 35824138 - 35824177
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  35824138 caaaagttgttaaaaaatggttgtacaaatatcatttctc 35824177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 51389107 - 51389146
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  51389107 aaaagttgttacaaagtggttgtacaaatatcatttctca 51389146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 169535 - 169573
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  169535 aaaagttgtcacaaaatggttgtacaaatatcatttctc 169573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 1562569 - 1562607
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  1562569 aaaagttgttagaaaatggttgtacaaatatcatttctc 1562607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1796408 - 1796366
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  1796408 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 1796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5208356 - 5208398
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  5208356 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 5208398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8026782 - 8026824
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| || ||||||||||||||||||||    
T  8026782 gtacaaaagttgtcacaaattgattgtataaatatcatttctc 8026824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 11546935 - 11546973
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  11546935 aaaagttgttagaaaatggttgtaaaaatatcatttctc 11546973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 32365690 - 32365728
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  32365690 aaagttgtcacaaaatggttgtacaaatatcatttctca 32365728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35037651 - 35037609
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||  ||||||||||||| ||||||||||||||    
T  35037651 gtacaaaagttgtatcaaaatggttgtacaaatatcatttctc 35037609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 45286149 - 45286187
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  45286149 aaagttgttgcaaaatggttgtacaaatatcatttctca 45286187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 49424853 - 49424891
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  49424853 aaaagttgttacaaaaaggttgtacaaatatcatttctc 49424891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 51891469 - 51891507
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttct 42  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  51891469 caaaagttgatacaaaatggttgtataaatataatttct 51891507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 53662457 - 53662499
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||||||||| |||||| ||||||||||||||    
T  53662457 gtacaaaaattgttacaaaatagttgtacaaatatcatttctc 53662499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 55268030 - 55268072
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  55268030 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 55268072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 1796013 - 1796054
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| ||||| |||||| |||||||||||||||    
T  1796013 acaaaagttgttaaaaaattgttgtacaaatatcatttctca 1796054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 8810610 - 8810569
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||| | |||||||||||| ||||||||||||||||    
T  8810610 caaaagttgtaagaaaatggttgtacaaatatcatttctcaa 8810569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 30042170 - 30042133
Alignment:
Q  7 aagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  30042170 aagttgtcacaaaatggttgtacaaatatcatttctca 30042133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 36123493 - 36123534
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaag 46  Q
    ||||||||||| |||||| ||||| |||||||||||||||||    
T  36123493 aaaagttgttataaaatgattgtacaaatatcatttctcaag 36123534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 36812435 - 36812476
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||| ||| |||||||| ||||||||||||||||    
T  36812435 caaaagttgttagaaattggttgtacaaatatcatttctcaa 36812476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 54036552 - 54036589
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  54036552 aaagttgtcacaaaatggttgtacaaatatcatttctc 54036589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 6290498 - 6290462
Alignment:
Q  7 aagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  6290498 aagttgttacaaaatagttgtacaaatatcatttctc 6290462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 15522394 - 15522354
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||| | ||||||||||||    
T  15522394 acaaaagttgttagaaaatggttgtacatatatcatttctc 15522354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 23220373 - 23220333
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| | |||||||||||| ||||||||||||||||    
T  23220373 aaaagttgtcaaaaaatggttgtacaaatatcatttctcaa 23220333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 25725727 - 25725767
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||| ||| |||||||| ||||||||||||||||    
T  25725727 aaaagttgttagaaagtggttgtacaaatatcatttctcaa 25725767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 26885329 - 26885289
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| ||||| |||||||| ||||||||||||||||    
T  26885329 aaaagttgtcacaaagtggttgtacaaatatcatttctcaa 26885289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 28676175 - 28676211
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttct 42  Q
    |||||||| |||||||||||||| |||||||||||||    
T  28676175 aaagttgtcacaaaatggttgtacaaatatcatttct 28676211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 47519752 - 47519788
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcattt 40  Q
    |||||||||||||||||||| |||| |||||||||||    
T  47519752 caaaagttgttacaaaatggatgtacaaatatcattt 47519788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 51160667 - 51160711
Alignment:
Q  2 tacaaaagttgttacaaaatggttgtataaatatcatttctcaag 46  Q
    |||||||||||| | |||||| ||||| |||||||||||||||||    
T  51160667 tacaaaagttgtcataaaatgtttgtacaaatatcatttctcaag 51160711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 51224871 - 51224911
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||  ||||||||||||| ||||||||||||||||    
T  51224871 aaaagttgtagcaaaatggttgtacaaatatcatttctcaa 51224911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 51377324 - 51377364
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| ||||| |||||||| ||||||||||||||    
T  51377324 acaaaagttgtcacaaattggttgtacaaatatcatttctc 51377364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 53463101 - 53463141
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||| |||||| |||||||||||| ||||||||||||||    
T  53463101 acaaaaattgttataaaatggttgtacaaatatcatttctc 53463141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 55609197 - 55609236
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  55609197 acaaaagttgt-acaaaatggttgtacaaatatcatttctc 55609236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 10644833 - 10644873
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  10644833 acaaaagttgttacaaaatggttgtacaaatatcatttctc 10644873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 35937544 - 35937584
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  35937544 caaaagttgttacaaaatggttgtacaaatatcatttctca 35937584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 6849294 - 6849332
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  6849294 aaaagttgtcacaaaatggttgtataaatatcatttctc 6849332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 25830277 - 25830319
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  25830277 acaaaagttgttagaaaatggttgtacaaatatcatttctcaa 25830319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 67192 - 67232
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  67192 acaaaagttgttagaaaatggttgtacaaatatcatttctc 67232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 38844823 - 38844862
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  38844823 aaaagttgtcacaaaatggttgtacaaatatcatttctca 38844862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 1370308 - 1370346
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  1370308 aaagttgttacaaagtggttgtacaaatatcatttctca 1370346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5742686 - 5742728
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||  ||||||||||||| ||||||||||||||    
T  5742686 gtacaaaagttgtaccaaaatggttgtacaaatatcatttctc 5742728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20288575 - 20288533
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  20288575 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 20288533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21075204 - 21075162
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  21075204 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 21075162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41293750 - 41293792
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  41293750 gtacaaaagttgtcacaaattggttgtaaaaatatcatttctc 41293792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1268804 - 1268845
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttct 42  Q
    ||||||||||| |||||||||| ||||| |||||||||||||    
T  1268804 gtacaaaagttcttacaaaatgattgtacaaatatcatttct 1268845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 4169784 - 4169751
Alignment:
Q  7 aagttgttacaaaatggttgtataaatatcattt 40  Q
    ||||||||| ||||||||||||||||||||||||    
T  4169784 aagttgttagaaaatggttgtataaatatcattt 4169751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 5771906 - 5771947
Alignment:
Q  2 tacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||| |||||||||||||  ||||||||||||||    
T  5771906 tacaaaagttgtcacaaaatggttgttcaaatatcatttctc 5771947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 7795336 - 7795377
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||    
T  7795336 acaaaagttgttaaaaaatagttctataaatatcatttctca 7795377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 12655963 - 12655922
Alignment:
Q  2 tacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||| ||| |||||||||||| ||||||||||||||    
T  12655963 tacaaaagttattataaaatggttgtacaaatatcatttctc 12655922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 13884355 - 13884314
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||||||||| |||||| ||||||| ||||||||    
T  13884355 caaaagttgttacaaaatcgttgtacaaatatcttttctcaa 13884314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 16699602 - 16699639
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  16699602 aaagttgttaccaaatggttgtacaaatatcatttctc 16699639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 21273745 - 21273782
Alignment:
Q  7 aagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  21273745 aagttgtcacaaaatggttgtacaaatatcatttctca 21273782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 21526311 - 21526352
Alignment:
Q  2 tacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||| ||| |||||||| ||||||||||||||    
T  21526311 tacaaaagttgttaaaaagtggttgtacaaatatcatttctc 21526352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 20473817 - 20473777
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||| |||||| |||||||||||| ||||||||||||||||    
T  20473817 aaaaattgttataaaatggttgtacaaatatcatttctcaa 20473777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21649197 - 21649241
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||||   |||||||||||| ||||||||||||||||    
T  21649197 gtacaaaagttgtacaaaaatggttgtacaaatatcatttctcaa 21649241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 22767170 - 22767130
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| | |||||||||||| ||||||||||||||||    
T  22767170 aaaagttgtgagaaaatggttgtacaaatatcatttctcaa 22767130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 31806337 - 31806297
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||| |||||| |||||||||||| ||||||||||||||||    
T  31806337 aaaaattgttagaaaatggttgtacaaatatcatttctcaa 31806297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 33100500 - 33100540
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||  ||||||||||||||    
T  33100500 acaaaagttgttataaaatggttgttcaaatatcatttctc 33100540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 35067200 - 35067160
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  35067200 acaaaagttgttaagaaatggttgtacaaatatcatttctc 35067160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 42131035 - 42130999
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcattt 40  Q
    ||||||||||| || ||||||||||||||||||||||    
T  42131035 caaaagttgttgcagaatggttgtataaatatcattt 42130999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 42620008 - 42620048
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||||| |||| ||||||||||||||    
T  42620008 acaaaagttgttagaaaatggatgtacaaatatcatttctc 42620048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 25127864 - 25127904
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  25127864 acaaaagttgttacaaaatggttgtacaaatatcatttctc 25127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3339528 - 3339570
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  3339528 gtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 3339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 29376748 - 29376787
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  29376748 aaaagttgtcacaaaatggttgtaaaaatatcatttctca 29376787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2056825 - 2056783
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||    
T  2056825 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 2056783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 8778905 - 8778943
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  8778905 aaaagttgttaaaaaatggttgtacaaatatcatttctc 8778943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 9188977 - 9189015
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  9188977 aaaagttgttaaaaaatggttgtacaaatatcatttctc 9189015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 26391318 - 26391356
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  26391318 aaaagttgttaaaaaatggttgtacaaatatcatttctc 26391356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 28965873 - 28965911
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  28965873 aaaagttgtaacaaaatggttgtacaaatatcatttctc 28965911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 1376404 - 1376363
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| |||||||||||| |||||| ||||||||    
T  1376404 acaaaagttgttagaaaatggttgtacaaatataatttctca 1376363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 1384152 - 1384111
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| |||||||||||| |||||| ||||||||    
T  1384152 acaaaagttgttagaaaatggttgtacaaatataatttctca 1384111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 3552185 - 3552222
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcattt 40  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  3552185 acaaaagttgttaaaaaatggttgtacaaatatcattt 3552222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 11014037 - 11013996
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||| |||||||||| ||||| |||||||||||||||    
T  11014037 acaaaagttattacaaaatgattgtagaaatatcatttctca 11013996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 16328724 - 16328761
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  16328724 aaagttgttataaaatggttgtacaaatatcatttctc 16328761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 17181966 - 17182007
Alignment:
Q  2 tacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||  ||||||||||| |||||||||||||||    
T  17181966 tacaaaagttgttcaaaaatggttgtttaaatatcatttctc 17182007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 27334899 - 27334858
Alignment:
Q  2 tacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||| ||||||| |||||| ||||||||||||||    
T  27334899 tacaaaagttgtcacaaaatagttgtacaaatatcatttctc 27334858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 27395639 - 27395598
Alignment:
Q  2 tacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||| ||||||| |||||| ||||||||||||||    
T  27395639 tacaaaagttgtcacaaaatagttgtacaaatatcatttctc 27395598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 30945860 - 30945823
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  30945860 aaagttgtcacaaaatgattgtataaatatcatttctc 30945823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 32621839 - 32621802
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttct 42  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  32621839 aaaagttgtcataaaatggttgtataaatatcatttct 32621802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 34570626 - 34570663
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcattt 40  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  34570626 acaaaagttattacaaaatggttgtacaaatatcattt 34570663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 15368854 - 15368894
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||||||||||| |||  ||||||||||||||    
T  15368854 acaaaagttgttacaaaatggatgttcaaatatcatttctc 15368894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 16352187 - 16352219
Alignment:
Q  10 ttgttacaaaatggttgtataaatatcatttct 42  Q
    |||||| ||||||||||||||||||||||||||    
T  16352187 ttgttataaaatggttgtataaatatcatttct 16352219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 20029300 - 20029264
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcattt 40  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  20029300 caaaagttgttaaaaagtggttgtataaatatcattt 20029264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25995484 - 25995440
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||| |||  |||||||||||||| ||||||||||||||||    
T  25995484 gtacaaaaattgccacaaaatggttgtacaaatatcatttctcaa 25995440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26094947 - 26094903
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||| |||  |||||||||||||| ||||||||||||||||    
T  26094947 gtacaaaaattgccacaaaatggttgtacaaatatcatttctcaa 26094903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 21433432 - 21433472
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  21433432 acaaaagttgttacaaaatggttgtacaaatatcatttctc 21433472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12999851 - 12999893
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  12999851 gtacaaaagttgttagaaaatggttgtacaaatatcatttctc 12999893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 30530607 - 30530645
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  30530607 aaaagttgtcacaaaatggttgtataaatatcatttctc 30530645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 18959042 - 18959005
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttct 42  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  18959042 aaaagttgtaacaaaatggttgtataaatatcatttct 18959005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 34974783 - 34974820
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||||||||||||||||||||||||||    
T  34974783 aaagttgtcacaaaatggttgtataaatatcatttctc 34974820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 49020435 - 49020476
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  49020435 acaaaagttgttaaaaaatggttgtacaaatatcatttctca 49020476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 740987 - 741027
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  740987 acaaaagttgttagaaaatagttgtataaatatcatttctc 741027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 9445146 - 9445107
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  9445146 aaaagttgttacaaaatggttgtacgaatatcatttctca 9445107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 25098821 - 25098860
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  25098821 aaaagttgttacaaagtggttgtacaaatatcatttctca 25098860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 26501334 - 26501295
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  26501334 caaaagttattacaaaatggttgtacaaatatcatttctc 26501295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 48872982 - 48873021
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  48872982 caaaagttgtcacaaagtggttgtataaatatcatttctc 48873021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 18541084 - 18541122
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  18541084 aaaagttgttagaaaatggttgtacaaatatcatttctc 18541122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 25989017 - 25989055
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  25989017 aaaagttgttaaaaaatggttgtacaaatatcatttctc 25989055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27787531 - 27787489
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||  |||| |||||||||||||||||||||||    
T  27787531 gtacaaaagttgtaccaaattggttgtataaatatcatttctc 27787489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 33076157 - 33076119
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  33076157 aaaagttgttagaaaatggttgtacaaatatcatttctc 33076119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35972833 - 35972875
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||| | ||||||||||||||    
T  35972833 gtacaaaagttgtcacaaaatggttgaacaaatatcatttctc 35972875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 41507217 - 41507255
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  41507217 aaagttgtcacaaaatggttgtacaaatatcatttctca 41507255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42256502 - 42256460
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||| |||||||| |||||||||||||| ||||||||||||||    
T  42256502 gtaccaaagttgtcacaaaatggttgtacaaatatcatttctc 42256460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 47059913 - 47059951
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  47059913 aaagttgttaaaaaatggttgtacaaatatcatttctca 47059951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 49931593 - 49931551
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||    
T  49931593 acaaaagttgttaaaaaatgattgtacaaatatcatttctcaa 49931551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 9011682 - 9011645
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  9011682 aaagttgtcacaaaatggttgtacaaatatcatttctc 9011645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 19427558 - 19427521
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  19427558 aaagttgtaccaaaatggttgtataaatatcatttctc 19427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 19651451 - 19651410
Alignment:
Q  2 tacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||| ||||||||||||||  |||||||||||||    
T  19651451 tacaaaagttgtcacaaaatggttgtaggaatatcatttctc 19651410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 27687542 - 27687579
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  27687542 aaagttgtcacaaaatggttgtacaaatatcatttctc 27687579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 32821673 - 32821632
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaag 46  Q
    ||||||||| ||||| |||||||| |||||||||||||||||    
T  32821673 aaaagttgtcacaaagtggttgtacaaatatcatttctcaag 32821632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 40596077 - 40596114
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  40596077 aaagttgtcacaaaatggttgtacaaatatcatttctc 40596114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 47386828 - 47386865
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  47386828 aaagttgttataaaatggttgtacaaatatcatttctc 47386865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 8959240 - 8959276
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttct 42  Q
    |||||||||||||||||||| || |||||||||||||    
T  8959240 aaagttgttacaaaatggttatacaaatatcatttct 8959276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 11947835 - 11947795
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| | |||||||||||| ||||||||||||||    
T  11947835 acaaaagttgtcataaaatggttgtacaaatatcatttctc 11947795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 26501511 - 26501550
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  26501511 acaaaagttgtta-aaaatggttgtataaatataatttctc 26501550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 28501486 - 28501446
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||||| | ||||||||||||||||||||||| ||||    
T  28501486 caaaagttgtcaaaaaatggttgtataaatatcattcctca 28501446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 40612150 - 40612114
Alignment:
Q  7 aagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  40612150 aagttgtcacaaaatggttgtacaaatatcatttctc 40612114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 49621393 - 49621361
Alignment:
Q  13 ttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||||||| ||||||||||||||||    
T  49621393 ttacaaaatggttgtacaaatatcatttctcaa 49621361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 50035570 - 50035606
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttc 41  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  50035570 aaaagttgtcacaaaatggttgtacaaatatcatttc 50035606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 51339733 - 51339769
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttc 41  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  51339733 aaaagttgttacaaagtggttgtacaaatatcatttc 51339769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 5031962 - 5031923
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  5031962 caaaagttgttacaaaatggttgtacaaatatcatttctc 5031923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 34134804 - 34134843
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  34134804 aaaagttgttacaaaatggttgtaaaaatatcatttctca 34134843  T

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Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44484685 - 44484727
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  44484685 gtacaaaaattgttacaaaatggttgtacaaatatcatttctc 44484727  T

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Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 40874293 - 40874334
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||| |||||||||||| ||||||||||||||||    
T  40874293 caaaagttgttaaaaaatggttgtacaaatatcatttctcaa 40874334  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 6336292 - 6336252
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  6336292 acaaaagttgttagaaaatggttgtacaaatatcatttctc 6336252  T

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Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30487498 - 30487542
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||    
T  30487498 gtacaaaagttgtcacaaattggttgtacaaatatcatttctcaa 30487542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 7121427 - 7121388
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  7121427 aaagttgttacaaaatggttatacaaatatcatttctcaa 7121388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 19529580 - 19529545
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcattt 40  Q
    ||||||||| ||||||||||||||||||||||||||    
T  19529580 aaaagttgtcacaaaatggttgtataaatatcattt 19529545  T

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Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 35334561 - 35334518
Alignment:
Q  2 tacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||    
T  35334561 tacaaaagttattataaaatggttgtacaaatatcatttctcaa 35334518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 36909875 - 36909914
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  36909875 caaaagttgtcacaaaatggttgtacaaatatcatttctc 36909914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 37966624 - 37966585
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  37966624 caaaagttgttttaaaatggttgtataaatatcatttctc 37966585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 1052529 - 1052567
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  1052529 aaaagttgttaaaaaatggttgtacaaatatcatttctc 1052567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 11980689 - 11980651
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  11980689 aaaagttgttagaaaatggttgtacaaatatcatttctc 11980651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 16754434 - 16754396
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  16754434 aaaagttgttagaaaattgttgtataaatatcatttctc 16754396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 31635843 - 31635881
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  31635843 aaaagttgttagaaaatggttgtacaaatatcatttctc 31635881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5852516 - 5852471
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaag 46  Q
    |||||||||||||   |||||||||||| |||||||||||||||||    
T  5852516 gtacaaaagttgtacaaaaatggttgtacaaatatcatttctcaag 5852471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 14500923 - 14500960
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcattt 40  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  14500923 acaaaaattgttataaaatggttgtataaatatcattt 14500960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 28277798 - 28277839
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    ||||||||||| | ||||| ||||||||||||||||||||||    
T  28277798 acaaaagttgtcagaaaatagttgtataaatatcatttctca 28277839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 29795484 - 29795447
Alignment:
Q  6 aaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  29795484 aaagttgtcacaaaatggttgtacaaatatcatttctc 29795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 6639505 - 6639545
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||| |||||||||||| |||||| |||||||||    
T  6639505 aaaagttgttagaaaatggttgtacaaatattatttctcaa 6639545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11728150 - 11728194
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    |||||||||||||  ||||||||||||| ||| ||||||||||||    
T  11728150 gtacaaaagttgtaccaaaatggttgtacaaacatcatttctcaa 11728194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 15123968 - 15124008
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctca 44  Q
    |||||||||| | |||||||||||| |||||||||||||||    
T  15123968 caaaagttgtcaaaaaatggttgtacaaatatcatttctca 15124008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 17267685 - 17267721
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttc 41  Q
    |||| |||| |||||||||||||||||||||||||||    
T  17267685 aaaaattgtcacaaaatggttgtataaatatcatttc 17267721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 24766192 - 24766152
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||| ||| |||||||||||| ||||||||||||||    
T  24766192 acaaaagttattaaaaaatggttgtacaaatatcatttctc 24766152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 28165167 - 28165127
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| |||||||||||||| || |||||||||||||    
T  28165167 aaaagttgtcacaaaatggttgtacaagtatcatttctcaa 28165127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 16627 - 16665
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  16627 aaaagttgttacaaaatggttgtacaaatatcatttctc 16665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 56217 - 56179
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  56217 aaaagttgttacaaaatggttgtacaaatatcatttctc 56179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 72202 - 72240
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  72202 aaaagttgttacaaaatggttgtacaaatatcatttctc 72240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 72405 - 72366
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  72405 caaaagttgttgcaaaatggttgtacaaatatcatttctc 72366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 8007 - 8043
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcattt 40  Q
    |||||||||| | ||||||||||||||||||||||||    
T  8007 caaaagttgtcataaaatggttgtataaatatcattt 8043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 31330 - 31366
Alignment:
Q  4 caaaagttgttacaaaatggttgtataaatatcattt 40  Q
    ||||||||||||||||||||||||  |||||||||||    
T  31330 caaaagttgttacaaaatggttgtccaaatatcattt 31366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 155944 - 155904
Alignment:
Q  5 aaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||| | |||||||||||| ||||||||||||||||    
T  155944 aaaagttgtaataaaatggttgtacaaatatcatttctcaa 155904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18637 - 18593
Alignment:
Q  1 gtacaaaagttgttacaaaatggttgtataaatatcatttctcaa 45  Q
    ||||||||||| | ||||| |||||||| ||||||||||||||||    
T  18637 gtacaaaagttatcacaaattggttgtacaaatatcatttctcaa 18593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 366333 - 366294
Alignment:
Q  3 acaaaagttgttacaaaatggttgtataaatatcatttctc 43  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  366333 acaaaagttgtta-aaaatggttgtacaaatatcatttctc 366294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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