View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11805_low_7 (Length: 385)

Name: NF11805_low_7
Description: NF11805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11805_low_7
NF11805_low_7
[»] scaffold0411 (1 HSPs)
scaffold0411 (11-385)||(12205-12580)
[»] chr2 (96 HSPs)
chr2 (11-385)||(30666979-30667353)
chr2 (11-385)||(20568485-20568860)
chr2 (11-385)||(23234997-23235371)
chr2 (11-385)||(22187855-22188212)
chr2 (11-385)||(9015107-9015478)
chr2 (11-385)||(25037004-25037369)
chr2 (11-385)||(25041111-25041476)
chr2 (11-385)||(21536985-21537358)
chr2 (11-385)||(24850402-24850776)
chr2 (47-385)||(22260432-22260769)
chr2 (11-238)||(25829124-25829352)
chr2 (11-238)||(13963860-13964088)
chr2 (11-302)||(10009569-10009860)
chr2 (11-251)||(18376775-18377016)
chr2 (11-385)||(38781388-38781744)
chr2 (15-251)||(30621210-30621447)
chr2 (15-251)||(30623831-30624068)
chr2 (11-357)||(40782467-40782806)
chr2 (11-265)||(19540406-19540659)
chr2 (11-281)||(24576025-24576295)
chr2 (11-385)||(22454726-22455100)
chr2 (11-385)||(22317583-22317976)
chr2 (11-251)||(24377091-24377332)
chr2 (11-357)||(28140399-28140729)
chr2 (11-385)||(39037392-39037752)
chr2 (39-379)||(20151792-20152117)
chr2 (22-251)||(6573993-6574223)
chr2 (11-315)||(33074216-33074519)
chr2 (11-201)||(24779333-24779524)
chr2 (11-265)||(23595427-23595677)
chr2 (11-265)||(41121577-41121829)
chr2 (11-200)||(31800807-31800997)
chr2 (98-276)||(7609039-7609216)
chr2 (255-385)||(25829338-25829468)
chr2 (11-200)||(28711618-28711808)
chr2 (11-199)||(6392624-6392814)
chr2 (14-201)||(25189391-25189578)
chr2 (11-314)||(22802451-22802750)
chr2 (27-280)||(30557160-30557415)
chr2 (28-385)||(22272139-22272493)
chr2 (27-280)||(34321777-34322030)
chr2 (11-281)||(35743842-35744110)
chr2 (22-195)||(26619027-26619200)
chr2 (39-174)||(45087130-45087266)
chr2 (11-232)||(28701119-28701339)
chr2 (11-280)||(31327806-31328075)
chr2 (11-280)||(31334527-31334796)
chr2 (11-251)||(1586913-1587142)
chr2 (291-385)||(38631224-38631318)
chr2 (270-385)||(30621437-30621551)
chr2 (270-385)||(30624058-30624172)
chr2 (324-385)||(18376673-18376734)
chr2 (11-72)||(23184353-23184414)
chr2 (11-230)||(44840424-44840631)
chr2 (11-105)||(28550933-28551028)
chr2 (307-385)||(13963746-13963824)
chr2 (307-377)||(24377356-24377426)
chr2 (27-195)||(44881173-44881341)
chr2 (324-385)||(44881451-44881512)
chr2 (11-105)||(22776303-22776398)
chr2 (11-105)||(22781681-22781776)
chr2 (11-61)||(31968103-31968153)
chr2 (27-195)||(19115089-19115257)
chr2 (324-385)||(19115427-19115488)
chr2 (324-385)||(24576352-24576413)
chr2 (11-51)||(22258191-22258231)
chr2 (11-105)||(14581505-14581600)
chr2 (11-105)||(40332077-40332172)
chr2 (307-357)||(10009532-10009582)
chr2 (336-385)||(20569774-20569823)
chr2 (332-381)||(26618847-26618896)
chr2 (255-379)||(28711454-28711578)
chr2 (255-379)||(6573880-6574003)
chr2 (307-359)||(23184109-23184161)
chr2 (307-359)||(23595366-23595418)
chr2 (28-106)||(3277037-3277116)
chr2 (307-385)||(25189638-25189717)
chr2 (324-383)||(41121492-41121551)
chr2 (331-385)||(18430675-18430729)
chr2 (324-385)||(19540701-19540762)
chr2 (254-315)||(44840639-44840699)
chr2 (255-315)||(6392854-6392913)
chr2 (255-315)||(22776137-22776196)
chr2 (255-315)||(22781515-22781574)
chr2 (255-315)||(28550750-28550809)
chr2 (255-315)||(40332297-40332356)
chr2 (186-315)||(22785472-22785599)
chr2 (27-105)||(22785670-22785749)
chr2 (260-315)||(30557111-30557165)
chr2 (16-54)||(19498010-19498048)
chr2 (335-385)||(24440501-24440551)
chr2 (269-315)||(38631184-38631230)
chr2 (324-365)||(18703075-18703116)
chr2 (254-315)||(31800709-31800769)
chr2 (324-379)||(22802777-22802833)
chr2 (27-59)||(24814645-24814677)
[»] chr1 (77 HSPs)
chr1 (11-385)||(22599892-22600267)
chr1 (11-377)||(33256071-33256436)
chr1 (11-377)||(33276243-33276608)
chr1 (11-377)||(20954173-20954558)
chr1 (11-385)||(22153852-22154243)
chr1 (11-385)||(2268526-2268897)
chr1 (28-351)||(23036273-23036595)
chr1 (28-351)||(35401821-35402143)
chr1 (11-251)||(28492248-28492489)
chr1 (11-385)||(48704199-48704569)
chr1 (11-385)||(19717519-19717874)
chr1 (11-385)||(16235022-16235381)
chr1 (11-314)||(38282562-38282864)
chr1 (15-385)||(32785663-32786018)
chr1 (11-217)||(22201614-22201821)
chr1 (11-376)||(22427078-22427442)
chr1 (11-251)||(1900340-1900581)
chr1 (11-357)||(12284418-12284780)
chr1 (11-265)||(1577862-1578115)
chr1 (11-385)||(36134185-36134543)
chr1 (11-283)||(22464621-22464894)
chr1 (11-220)||(10757416-10757627)
chr1 (11-251)||(29215792-29216031)
chr1 (11-244)||(39200845-39201077)
chr1 (27-265)||(7309830-7310068)
chr1 (14-385)||(21191591-21191947)
chr1 (11-265)||(2834684-2834938)
chr1 (11-315)||(48570014-48570316)
chr1 (14-220)||(2267087-2267292)
chr1 (11-220)||(25448443-25448651)
chr1 (11-251)||(21028788-21029029)
chr1 (14-220)||(30893090-30893298)
chr1 (11-315)||(21702809-21703111)
chr1 (11-280)||(2327255-2327525)
chr1 (11-251)||(26701973-26702214)
chr1 (11-200)||(35040161-35040351)
chr1 (11-246)||(44821396-44821630)
chr1 (11-198)||(12613713-12613899)
chr1 (11-232)||(30572192-30572411)
chr1 (31-385)||(17024693-17025029)
chr1 (11-302)||(46088984-46089266)
chr1 (22-183)||(14263362-14263525)
chr1 (14-315)||(10250984-10251274)
chr1 (307-385)||(1578124-1578202)
chr1 (302-385)||(1900619-1900702)
chr1 (241-359)||(12613533-12613649)
chr1 (324-385)||(18896299-18896360)
chr1 (255-379)||(2267296-2267419)
chr1 (11-62)||(19215607-19215658)
chr1 (11-61)||(23024783-23024833)
chr1 (267-357)||(30893314-30893403)
chr1 (254-385)||(10757645-10757773)
chr1 (254-379)||(19170061-19170192)
chr1 (335-385)||(20109686-20109736)
chr1 (255-352)||(21029019-21029114)
chr1 (11-61)||(21135195-21135245)
chr1 (257-385)||(26701854-26701981)
chr1 (311-385)||(28492146-28492220)
chr1 (343-385)||(35402146-35402188)
chr1 (298-385)||(7310086-7310170)
chr1 (11-102)||(21121057-21121149)
chr1 (16-59)||(17371042-17371085)
chr1 (11-58)||(37642243-37642290)
chr1 (28-70)||(18896623-18896665)
chr1 (335-377)||(24227707-24227749)
chr1 (27-119)||(7745066-7745159)
chr1 (255-288)||(21984811-21984844)
chr1 (254-283)||(34255341-34255370)
chr1 (324-385)||(38282891-38282952)
chr1 (30-102)||(42284642-42284715)
chr1 (255-288)||(42284842-42284875)
chr1 (256-288)||(21134991-21135023)
chr1 (27-102)||(21984607-21984683)
chr1 (291-379)||(22464508-22464595)
chr1 (255-315)||(23024984-23025043)
chr1 (324-379)||(25448249-25448305)
chr1 (331-379)||(39200741-39200789)
[»] scaffold0290 (1 HSPs)
scaffold0290 (13-385)||(18362-18734)
[»] chr5 (66 HSPs)
chr5 (11-385)||(17814960-17815333)
chr5 (11-357)||(19536101-19536446)
chr5 (11-251)||(41566338-41566579)
chr5 (11-385)||(23412778-23413119)
chr5 (11-238)||(6512348-6512573)
chr5 (11-281)||(7745569-7745838)
chr5 (11-377)||(26784346-26784699)
chr5 (11-238)||(89339-89567)
chr5 (11-238)||(21910548-21910776)
chr5 (11-265)||(21072131-21072385)
chr5 (11-379)||(33022656-33023008)
chr5 (11-385)||(20550887-20551228)
chr5 (11-359)||(642506-642849)
chr5 (11-385)||(23881059-23881431)
chr5 (11-359)||(21099503-21099849)
chr5 (11-221)||(13545454-13545657)
chr5 (11-354)||(29138210-29138551)
chr5 (11-230)||(31117869-31118088)
chr5 (11-281)||(30742973-30743242)
chr5 (11-315)||(42243673-42243976)
chr5 (11-232)||(11993880-11994100)
chr5 (11-251)||(4887014-4887253)
chr5 (11-377)||(14086332-14086684)
chr5 (27-281)||(26759157-26759411)
chr5 (11-232)||(15516962-15517181)
chr5 (11-252)||(6499231-6499471)
chr5 (11-359)||(9398557-9398879)
chr5 (11-187)||(12352763-12352940)
chr5 (11-220)||(21198940-21199148)
chr5 (12-201)||(25096778-25096969)
chr5 (12-201)||(25154748-25154939)
chr5 (255-385)||(21910762-21910892)
chr5 (11-280)||(33933259-33933532)
chr5 (14-232)||(3245367-3245583)
chr5 (14-232)||(28464274-28464481)
chr5 (11-149)||(28139599-28139738)
chr5 (256-385)||(89224-89352)
chr5 (11-232)||(9088961-9089171)
chr5 (11-131)||(30115861-30115982)
chr5 (16-289)||(32160763-32161037)
chr5 (256-379)||(5430106-5430228)
chr5 (307-382)||(12352608-12352684)
chr5 (215-283)||(12352690-12352758)
chr5 (22-154)||(26765501-26765634)
chr5 (11-232)||(25930090-25930301)
chr5 (311-385)||(7745434-7745508)
chr5 (11-61)||(10848765-10848815)
chr5 (255-357)||(41566247-41566348)
chr5 (324-385)||(21072028-21072089)
chr5 (126-232)||(5429991-5430096)
chr5 (324-359)||(21198835-21198870)
chr5 (262-379)||(4887250-4887367)
chr5 (16-129)||(11208012-11208125)
chr5 (11-61)||(35932101-35932151)
chr5 (206-315)||(35986083-35986192)
chr5 (324-385)||(25096598-25096659)
chr5 (254-303)||(25096661-25096710)
chr5 (324-385)||(25154568-25154629)
chr5 (254-303)||(25154631-25154680)
chr5 (266-379)||(31118108-31118220)
chr5 (324-379)||(23478678-23478734)
chr5 (256-288)||(33933523-33933555)
chr5 (324-355)||(6499525-6499556)
chr5 (254-296)||(6512306-6512348)
chr5 (254-315)||(23391471-23391531)
chr5 (255-354)||(30115692-30115792)
[»] chr8 (81 HSPs)
chr8 (11-377)||(29693303-29693671)
chr8 (11-385)||(39693523-39693897)
chr8 (11-385)||(17914447-17914821)
chr8 (11-385)||(16681095-16681466)
chr8 (22-385)||(19943234-19943599)
chr8 (11-385)||(24646326-24646699)
chr8 (12-385)||(20382185-20382556)
chr8 (11-385)||(19156184-19156544)
chr8 (14-381)||(17525523-17525889)
chr8 (11-279)||(16207294-16207563)
chr8 (11-385)||(16188972-16189361)
chr8 (12-385)||(17267463-17267833)
chr8 (39-359)||(33082873-33083192)
chr8 (14-246)||(12757690-12757923)
chr8 (14-385)||(17441612-17441967)
chr8 (11-385)||(21932871-21933263)
chr8 (14-265)||(18321067-18321319)
chr8 (11-385)||(18120913-18121269)
chr8 (84-385)||(20255357-20255654)
chr8 (11-385)||(602524-602883)
chr8 (11-385)||(17701733-17702088)
chr8 (11-251)||(23185150-23185389)
chr8 (11-348)||(17797410-17797745)
chr8 (29-347)||(23263438-23263757)
chr8 (10-357)||(18679802-18680132)
chr8 (14-385)||(19707497-19707864)
chr8 (12-251)||(30421352-30421591)
chr8 (11-238)||(18718989-18719217)
chr8 (131-288)||(22745596-22745753)
chr8 (11-281)||(15335981-15336251)
chr8 (11-281)||(15425046-15425316)
chr8 (11-281)||(15516350-15516620)
chr8 (11-315)||(40845248-40845550)
chr8 (14-232)||(24551265-24551482)
chr8 (11-315)||(22673766-22674069)
chr8 (11-281)||(36105183-36105453)
chr8 (11-283)||(9320557-9320830)
chr8 (11-280)||(1237625-1237894)
chr8 (11-196)||(43644884-43645069)
chr8 (11-232)||(45538382-45538602)
chr8 (14-278)||(22663107-22663371)
chr8 (22-217)||(18722602-18722798)
chr8 (22-217)||(18730947-18731143)
chr8 (22-198)||(18685372-18685549)
chr8 (11-232)||(6407714-6407924)
chr8 (27-246)||(24832985-24833204)
chr8 (144-315)||(3598206-3598375)
chr8 (11-68)||(25164058-25164115)
chr8 (307-383)||(18320982-18321058)
chr8 (113-315)||(43639865-43640065)
chr8 (29-195)||(22461617-22461783)
chr8 (324-385)||(16207556-16207617)
chr8 (11-106)||(14989518-14989614)
chr8 (11-106)||(18151713-18151809)
chr8 (324-385)||(22461419-22461480)
chr8 (12-139)||(19956375-19956502)
chr8 (307-385)||(22745754-22745832)
chr8 (268-383)||(19956142-19956256)
chr8 (16-129)||(45567945-45568059)
chr8 (255-357)||(18719203-18719300)
chr8 (324-377)||(18772929-18772982)
chr8 (302-379)||(30421237-30421314)
chr8 (255-315)||(13430511-13430570)
chr8 (255-303)||(18151551-18151599)
chr8 (255-315)||(21288611-21288670)
chr8 (324-379)||(21541289-21541345)
chr8 (256-315)||(6407934-6407992)
chr8 (331-385)||(18722420-18722475)
chr8 (22-57)||(43639782-43639817)
chr8 (16-54)||(7018416-7018454)
chr8 (11-61)||(13430741-13430791)
chr8 (331-384)||(18685201-18685255)
chr8 (331-384)||(18730766-18730820)
chr8 (16-54)||(20259652-20259690)
chr8 (16-54)||(21046282-21046320)
chr8 (335-377)||(23772679-23772721)
chr8 (335-385)||(26833360-26833410)
chr8 (255-288)||(1745368-1745401)
chr8 (324-379)||(1237969-1238025)
chr8 (255-315)||(24551521-24551580)
chr8 (347-379)||(29379915-29379947)
[»] chr3 (95 HSPs)
chr3 (14-385)||(15903196-15903568)
chr3 (11-385)||(49642569-49642926)
chr3 (11-382)||(31303381-31303755)
chr3 (14-385)||(13948334-13948705)
chr3 (11-385)||(14392796-14393168)
chr3 (11-385)||(20646149-20646524)
chr3 (11-385)||(6090727-6091101)
chr3 (13-385)||(28582103-28582476)
chr3 (13-385)||(52920403-52920774)
chr3 (11-385)||(29951229-29951602)
chr3 (11-385)||(30000383-30000756)
chr3 (11-385)||(18121411-18121786)
chr3 (11-238)||(37467328-37467556)
chr3 (11-385)||(12962891-12963249)
chr3 (30-385)||(14969341-14969683)
chr3 (11-195)||(41494994-41495179)
chr3 (11-356)||(2561183-2561514)
chr3 (14-238)||(17238858-17239083)
chr3 (11-182)||(13780576-13780748)
chr3 (11-251)||(47207701-47207941)
chr3 (11-265)||(49553400-49553653)
chr3 (11-379)||(11223559-11223910)
chr3 (11-251)||(40799869-40800108)
chr3 (11-251)||(16658541-16658782)
chr3 (27-251)||(38177566-38177791)
chr3 (11-238)||(12726166-12726394)
chr3 (28-315)||(46349705-46349991)
chr3 (11-251)||(47405346-47405585)
chr3 (11-230)||(18142696-18142916)
chr3 (39-201)||(13824092-13824255)
chr3 (11-351)||(25398098-25398419)
chr3 (22-281)||(14955433-14955692)
chr3 (27-281)||(2785075-2785330)
chr3 (11-220)||(19888898-19889107)
chr3 (11-251)||(20627356-20627595)
chr3 (11-379)||(53056523-53056891)
chr3 (11-201)||(16032520-16032710)
chr3 (11-220)||(24775490-24775698)
chr3 (220-385)||(41495179-41495343)
chr3 (22-281)||(20725093-20725350)
chr3 (11-139)||(22804058-22804187)
chr3 (248-385)||(13824265-13824403)
chr3 (22-230)||(5213583-5213789)
chr3 (27-277)||(33583240-33583492)
chr3 (11-220)||(22140759-22140967)
chr3 (11-192)||(29855404-29855587)
chr3 (236-385)||(22803891-22804038)
chr3 (241-385)||(16199602-16199744)
chr3 (84-265)||(11869137-11869317)
chr3 (12-201)||(12388846-12389035)
chr3 (108-315)||(49666276-49666480)
chr3 (254-385)||(37467541-37467671)
chr3 (29-385)||(19249203-19249558)
chr3 (14-280)||(21640865-21641130)
chr3 (11-288)||(21605550-21605818)
chr3 (11-303)||(21636551-21636834)
chr3 (29-155)||(23538185-23538312)
chr3 (270-379)||(47405247-47405356)
chr3 (307-385)||(16032771-16032849)
chr3 (256-385)||(17238744-17238871)
chr3 (11-72)||(11868264-11868325)
chr3 (11-229)||(46796324-46796531)
chr3 (324-377)||(26417489-26417542)
chr3 (11-61)||(1728129-1728179)
chr3 (22-155)||(12968312-12968446)
chr3 (11-61)||(49666519-49666569)
chr3 (332-385)||(12968655-12968708)
chr3 (324-385)||(20725400-20725461)
chr3 (324-384)||(12388667-12388727)
chr3 (335-383)||(14073003-14073051)
chr3 (306-385)||(38177479-38177558)
chr3 (324-379)||(20627275-20627330)
chr3 (256-315)||(40851184-40851242)
chr3 (306-383)||(49553280-49553359)
chr3 (335-385)||(8728816-8728866)
chr3 (335-385)||(9080703-9080753)
chr3 (11-61)||(9700150-9700200)
chr3 (241-303)||(12388729-12388791)
chr3 (11-61)||(30054331-30054381)
chr3 (270-382)||(16658434-16658551)
chr3 (16-61)||(37412605-37412650)
chr3 (254-315)||(50300440-50300500)
chr3 (324-385)||(50300526-50300587)
chr3 (324-379)||(11908761-11908817)
chr3 (255-315)||(18142643-18142702)
chr3 (255-315)||(30054102-30054161)
chr3 (291-379)||(47207986-47208073)
chr3 (334-385)||(4242996-4243047)
chr3 (22-65)||(26417789-26417832)
chr3 (327-385)||(12726053-12726111)
chr3 (331-379)||(11869401-11869449)
chr3 (324-379)||(12752397-12752453)
chr3 (22-54)||(13557777-13557809)
chr3 (255-315)||(33598105-33598164)
chr3 (307-379)||(40800117-40800189)
[»] chr7 (106 HSPs)
chr7 (14-385)||(11319400-11319771)
chr7 (11-385)||(10882965-10883339)
chr7 (11-385)||(13880096-13880470)
chr7 (11-385)||(2913413-2913774)
chr7 (11-385)||(12366542-12366914)
chr7 (12-385)||(15088513-15088855)
chr7 (11-385)||(22577812-22578187)
chr7 (11-385)||(30025897-30026257)
chr7 (11-385)||(44467056-44467416)
chr7 (11-385)||(11792899-11793273)
chr7 (11-385)||(2500030-2500391)
chr7 (11-302)||(16316433-16316723)
chr7 (11-244)||(13137827-13138061)
chr7 (14-281)||(21283270-21283536)
chr7 (14-385)||(28409034-28409400)
chr7 (27-288)||(15467924-15468186)
chr7 (11-241)||(13302802-13303033)
chr7 (40-385)||(13692372-13692707)
chr7 (11-283)||(9069554-9069828)
chr7 (11-251)||(21695393-21695634)
chr7 (11-385)||(33691518-33691878)
chr7 (13-213)||(13730638-13730839)
chr7 (11-377)||(13260424-13260781)
chr7 (11-217)||(13648721-13648928)
chr7 (22-246)||(23279889-23280113)
chr7 (11-230)||(21692279-21692499)
chr7 (14-238)||(24788136-24788361)
chr7 (11-251)||(9709729-9709968)
chr7 (11-230)||(30944271-30944489)
chr7 (11-265)||(29935272-29935524)
chr7 (11-251)||(48236829-48237068)
chr7 (11-251)||(331637-331877)
chr7 (15-230)||(30945304-30945518)
chr7 (11-251)||(33605677-33605917)
chr7 (14-251)||(39284490-39284727)
chr7 (16-198)||(19237022-19237204)
chr7 (14-201)||(5000796-5000985)
chr7 (11-262)||(13018421-13018671)
chr7 (14-230)||(14426542-14426757)
chr7 (14-303)||(35952561-35952851)
chr7 (11-232)||(28622302-28622522)
chr7 (185-385)||(14193241-14193445)
chr7 (39-385)||(13880608-13880956)
chr7 (11-315)||(4821466-4821768)
chr7 (11-200)||(16111860-16112050)
chr7 (11-122)||(16309961-16310073)
chr7 (45-251)||(16542947-16543152)
chr7 (45-251)||(16622510-16622715)
chr7 (13-147)||(14193108-14193243)
chr7 (39-315)||(12174203-12174479)
chr7 (22-251)||(2265446-2265674)
chr7 (84-234)||(15704443-15704591)
chr7 (255-385)||(13648935-13649065)
chr7 (12-217)||(13893958-13894162)
chr7 (137-230)||(4494625-4494718)
chr7 (11-238)||(41842212-41842439)
chr7 (302-385)||(48800433-48800516)
chr7 (14-129)||(19711060-19711176)
chr7 (11-303)||(8182922-8183213)
chr7 (302-385)||(13137716-13137799)
chr7 (91-200)||(13472555-13472665)
chr7 (269-385)||(4494725-4494839)
chr7 (256-379)||(14426752-14426874)
chr7 (36-385)||(13031879-13032213)
chr7 (248-382)||(9098040-9098172)
chr7 (14-105)||(1293025-1293117)
chr7 (333-385)||(21695684-21695736)
chr7 (307-385)||(16316368-16316446)
chr7 (241-385)||(19236804-19236947)
chr7 (255-377)||(30945189-30945310)
chr7 (11-302)||(48062704-48062986)
chr7 (225-302)||(13303045-13303122)
chr7 (324-385)||(13890738-13890799)
chr7 (11-70)||(4494569-4494628)
chr7 (307-385)||(41842098-41842177)
chr7 (39-140)||(9098282-9098384)
chr7 (11-61)||(27871710-27871760)
chr7 (270-379)||(9709631-9709739)
chr7 (340-385)||(13730502-13730547)
chr7 (16-61)||(14425444-14425489)
chr7 (307-376)||(24788381-24788450)
chr7 (336-385)||(29935170-29935219)
chr7 (249-357)||(5000675-5000782)
chr7 (307-385)||(13303109-13303187)
chr7 (84-150)||(16556664-16556730)
chr7 (84-150)||(16608932-16608998)
chr7 (11-61)||(24794831-24794881)
chr7 (324-384)||(331956-332015)
chr7 (255-315)||(1293185-1293244)
chr7 (255-315)||(7339762-7339821)
chr7 (27-102)||(19339324-19339400)
chr7 (331-379)||(48236732-48236780)
chr7 (157-231)||(7339821-7339893)
chr7 (324-379)||(16111681-16111736)
chr7 (157-289)||(19710899-19711031)
chr7 (338-385)||(23279832-23279879)
chr7 (324-379)||(35952469-35952524)
chr7 (307-385)||(39284387-39284466)
chr7 (335-385)||(13172189-13172239)
chr7 (255-377)||(30944156-30944277)
chr7 (17-54)||(14745750-14745787)
chr7 (255-315)||(5826185-5826244)
chr7 (255-315)||(19339137-19339196)
chr7 (324-379)||(19710797-19710853)
chr7 (324-376)||(21692543-21692595)
chr7 (255-283)||(27871931-27871959)
[»] scaffold0861 (1 HSPs)
scaffold0861 (33-385)||(4688-5040)
[»] chr4 (84 HSPs)
chr4 (11-385)||(45833384-45833759)
chr4 (11-385)||(16632430-16632802)
chr4 (19-385)||(12601099-12601464)
chr4 (11-385)||(12810942-12811296)
chr4 (11-385)||(14604655-14605028)
chr4 (11-385)||(29680306-29680665)
chr4 (11-385)||(37435269-37435656)
chr4 (84-380)||(14833460-14833751)
chr4 (11-251)||(19884692-19884932)
chr4 (11-218)||(37985525-37985733)
chr4 (14-385)||(56034567-56034922)
chr4 (11-246)||(3395580-3395816)
chr4 (11-215)||(19666362-19666567)
chr4 (11-385)||(6641674-6642044)
chr4 (11-304)||(40846089-40846383)
chr4 (11-201)||(9140902-9141093)
chr4 (11-241)||(14904246-14904477)
chr4 (11-230)||(19620962-19621182)
chr4 (39-251)||(3483739-3483952)
chr4 (11-385)||(10072925-10073286)
chr4 (11-230)||(55380280-55380500)
chr4 (22-231)||(22675422-22675630)
chr4 (11-251)||(13575996-13576235)
chr4 (11-251)||(19911760-19912002)
chr4 (22-281)||(17247245-17247503)
chr4 (11-251)||(10692841-10693080)
chr4 (11-251)||(10906607-10906846)
chr4 (27-251)||(413008-413231)
chr4 (13-200)||(29121362-29121550)
chr4 (22-251)||(54679931-54680157)
chr4 (117-261)||(23123528-23123672)
chr4 (11-258)||(23750512-23750758)
chr4 (11-251)||(6517475-6517714)
chr4 (89-385)||(15139296-15139592)
chr4 (254-385)||(9141095-9141226)
chr4 (11-200)||(8105628-8105819)
chr4 (11-200)||(56532991-56533182)
chr4 (269-385)||(19620840-19620955)
chr4 (11-230)||(3105323-3105540)
chr4 (22-195)||(11915701-11915874)
chr4 (31-177)||(16940026-16940172)
chr4 (84-279)||(55731844-55732036)
chr4 (324-385)||(17540721-17540782)
chr4 (302-385)||(3395906-3395989)
chr4 (11-232)||(17398585-17398795)
chr4 (11-111)||(16853493-16853594)
chr4 (165-302)||(22089733-22089869)
chr4 (11-151)||(25651084-25651224)
chr4 (324-385)||(40846385-40846447)
chr4 (307-384)||(55380528-55380605)
chr4 (27-66)||(8685509-8685548)
chr4 (11-61)||(20977447-20977497)
chr4 (270-379)||(13575898-13576006)
chr4 (22-186)||(17540396-17540560)
chr4 (324-377)||(17787793-17787846)
chr4 (324-385)||(41114501-41114562)
chr4 (270-379)||(54680147-54680255)
chr4 (255-315)||(14571243-14571302)
chr4 (334-385)||(11901528-11901579)
chr4 (27-70)||(17788109-17788152)
chr4 (11-61)||(14154065-14154115)
chr4 (11-61)||(22190836-22190886)
chr4 (324-385)||(3497936-3497997)
chr4 (255-312)||(10693070-10693126)
chr4 (255-312)||(10906836-10906892)
chr4 (328-385)||(11916027-11916084)
chr4 (324-385)||(14904067-14904128)
chr4 (11-68)||(38513868-38513925)
chr4 (30-109)||(11901196-11901276)
chr4 (256-315)||(8105889-8105947)
chr4 (11-102)||(39419764-39419855)
chr4 (27-61)||(1672395-1672429)
chr4 (27-61)||(1674870-1674904)
chr4 (11-57)||(9751615-9751661)
chr4 (255-288)||(6517704-6517737)
chr4 (255-288)||(17398543-17398576)
chr4 (255-288)||(22191057-22191090)
chr4 (255-379)||(29121608-29121732)
chr4 (255-283)||(413221-413249)
chr4 (255-315)||(3105270-3105329)
chr4 (302-379)||(19884969-19885048)
chr4 (255-315)||(20977648-20977707)
chr4 (343-379)||(33378757-33378793)
chr4 (11-102)||(40860657-40860749)
[»] scaffold0771 (1 HSPs)
scaffold0771 (14-385)||(474-845)
[»] chr6 (70 HSPs)
chr6 (27-385)||(13435544-13435902)
chr6 (11-380)||(12715219-12715573)
chr6 (11-383)||(15531404-15531777)
chr6 (15-382)||(23284564-23284930)
chr6 (13-385)||(9717841-9718213)
chr6 (28-385)||(21625114-21625468)
chr6 (11-385)||(13602168-13602525)
chr6 (11-385)||(24116824-24117198)
chr6 (12-385)||(20112493-20112852)
chr6 (11-251)||(32544261-32544502)
chr6 (93-385)||(25597558-25597832)
chr6 (11-385)||(19623975-19624332)
chr6 (45-385)||(34451463-34451787)
chr6 (11-379)||(22802137-22802489)
chr6 (11-283)||(26972107-26972379)
chr6 (11-385)||(19086154-19086520)
chr6 (11-230)||(29918013-29918232)
chr6 (11-217)||(15302196-15302403)
chr6 (14-201)||(15987232-15987421)
chr6 (11-379)||(18435552-18435938)
chr6 (11-230)||(14100373-14100592)
chr6 (11-196)||(18378310-18378496)
chr6 (15-379)||(20730505-20730853)
chr6 (11-376)||(16264954-16265303)
chr6 (39-230)||(19688790-19688980)
chr6 (11-283)||(22076288-22076560)
chr6 (22-283)||(21618251-21618512)
chr6 (14-246)||(15954702-15954933)
chr6 (11-273)||(16336123-16336381)
chr6 (11-232)||(16877209-16877429)
chr6 (9-246)||(19832951-19833187)
chr6 (11-303)||(20487778-20488071)
chr6 (28-198)||(10640384-10640555)
chr6 (28-288)||(19470683-19470941)
chr6 (17-230)||(12348995-12349206)
chr6 (15-189)||(12423261-12423435)
chr6 (11-180)||(26943572-26943741)
chr6 (27-379)||(21235137-21235461)
chr6 (11-101)||(25594064-25594155)
chr6 (307-385)||(14100252-14100330)
chr6 (248-379)||(10640222-10640351)
chr6 (267-385)||(15302422-15302541)
chr6 (11-200)||(33351892-33352079)
chr6 (302-385)||(32544555-32544638)
chr6 (307-385)||(19689008-19689086)
chr6 (324-385)||(15987503-15987564)
chr6 (307-379)||(18378545-18378617)
chr6 (255-379)||(15954928-15955052)
chr6 (335-383)||(25592838-25592886)
chr6 (14-61)||(19482751-19482798)
chr6 (11-61)||(17316628-17316678)
chr6 (339-385)||(18383962-18384008)
chr6 (11-61)||(19066121-19066171)
chr6 (241-303)||(26943789-26943851)
chr6 (11-72)||(17381517-17381578)
chr6 (324-385)||(26971989-26972050)
chr6 (337-385)||(16462432-16462480)
chr6 (255-315)||(19065892-19065951)
chr6 (334-377)||(23298259-23298302)
chr6 (335-385)||(7812314-7812364)
chr6 (257-315)||(19832867-19832924)
chr6 (254-315)||(17381653-17381713)
chr6 (255-288)||(17608214-17608247)
chr6 (254-283)||(26589847-26589876)
chr6 (255-315)||(139233-139292)
chr6 (255-315)||(147254-147313)
chr6 (255-315)||(12423446-12423505)
chr6 (255-283)||(16877438-16877466)
chr6 (324-379)||(17608104-17608160)
chr6 (324-376)||(26943854-26943906)
[»] scaffold0026 (6 HSPs)
scaffold0026 (11-385)||(60012-60385)
scaffold0026 (11-238)||(7922-8150)
scaffold0026 (267-385)||(8148-8266)
scaffold0026 (205-385)||(115712-115889)
scaffold0026 (225-301)||(151714-151788)
scaffold0026 (165-201)||(151795-151831)
[»] scaffold0116 (1 HSPs)
scaffold0116 (11-385)||(20712-21086)
[»] scaffold0084 (3 HSPs)
scaffold0084 (11-385)||(32481-32842)
scaffold0084 (11-385)||(49328-49687)
scaffold0084 (16-289)||(181-455)
[»] scaffold0004 (7 HSPs)
scaffold0004 (11-301)||(377383-377674)
scaffold0004 (11-385)||(220234-220607)
scaffold0004 (11-315)||(211394-211695)
scaffold0004 (20-191)||(244219-244390)
scaffold0004 (324-385)||(243995-244056)
scaffold0004 (307-385)||(377317-377395)
scaffold0004 (336-385)||(30612-30661)
[»] scaffold0035 (2 HSPs)
scaffold0035 (14-385)||(19215-19584)
scaffold0035 (11-281)||(99053-99320)
[»] scaffold0359 (1 HSPs)
scaffold0359 (11-385)||(5432-5805)
[»] scaffold0120 (2 HSPs)
scaffold0120 (11-385)||(36517-36890)
scaffold0120 (11-385)||(42115-42488)
[»] scaffold0005 (3 HSPs)
scaffold0005 (11-385)||(212350-212723)
scaffold0005 (84-380)||(5948-6239)
scaffold0005 (255-315)||(246074-246133)
[»] scaffold0047 (3 HSPs)
scaffold0047 (84-380)||(30294-30585)
scaffold0047 (11-265)||(9899-10151)
scaffold0047 (322-382)||(10175-10235)
[»] scaffold0083 (3 HSPs)
scaffold0083 (14-302)||(25798-26087)
scaffold0083 (48-177)||(44652-44782)
scaffold0083 (307-385)||(25733-25811)
[»] scaffold0171 (1 HSPs)
scaffold0171 (11-385)||(27186-27544)
[»] scaffold1434 (1 HSPs)
scaffold1434 (84-357)||(556-827)
[»] scaffold0337 (2 HSPs)
scaffold0337 (11-281)||(14644-14913)
scaffold0337 (307-385)||(14953-15031)
[»] scaffold0227 (2 HSPs)
scaffold0227 (11-288)||(22672-22951)
scaffold0227 (307-379)||(22952-23024)
[»] scaffold0334 (2 HSPs)
scaffold0334 (45-385)||(9825-10163)
scaffold0334 (14-49)||(7823-7858)
[»] scaffold0251 (1 HSPs)
scaffold0251 (20-385)||(7708-8059)
[»] scaffold0065 (1 HSPs)
scaffold0065 (11-383)||(1686-2071)
[»] scaffold0003 (1 HSPs)
scaffold0003 (11-379)||(89818-90170)
[»] scaffold0146 (2 HSPs)
scaffold0146 (14-238)||(15116-15341)
scaffold0146 (256-385)||(15328-15455)
[»] scaffold0210 (2 HSPs)
scaffold0210 (11-238)||(1656-1884)
scaffold0210 (255-385)||(1870-2000)
[»] scaffold0161 (3 HSPs)
scaffold0161 (14-251)||(9981-10220)
scaffold0161 (307-383)||(9880-9956)
scaffold0161 (14-72)||(14826-14884)
[»] scaffold0022 (6 HSPs)
scaffold0022 (84-385)||(39495-39781)
scaffold0022 (84-385)||(137555-137841)
scaffold0022 (11-201)||(159051-159241)
scaffold0022 (241-385)||(159296-159437)
scaffold0022 (11-71)||(37398-37458)
scaffold0022 (11-71)||(135458-135518)
[»] scaffold0479 (3 HSPs)
scaffold0479 (11-238)||(9965-10193)
scaffold0479 (307-385)||(10228-10306)
scaffold0479 (254-302)||(10193-10241)
[»] scaffold0023 (1 HSPs)
scaffold0023 (28-385)||(103585-103926)
[»] scaffold0217 (4 HSPs)
scaffold0217 (11-246)||(19027-19263)
scaffold0217 (11-281)||(21976-22246)
scaffold0217 (14-232)||(9559-9775)
scaffold0217 (324-385)||(19343-19404)
[»] scaffold0426 (2 HSPs)
scaffold0426 (11-184)||(13567-13741)
scaffold0426 (254-385)||(13850-13981)
[»] scaffold0193 (1 HSPs)
scaffold0193 (11-357)||(15789-16121)
[»] scaffold0364 (1 HSPs)
scaffold0364 (11-385)||(6003-6359)
[»] scaffold0012 (1 HSPs)
scaffold0012 (11-283)||(215340-215612)
[»] scaffold0439 (1 HSPs)
scaffold0439 (11-280)||(6586-6855)
[»] scaffold0243 (2 HSPs)
scaffold0243 (131-302)||(4816-4987)
scaffold0243 (307-385)||(4751-4829)
[»] scaffold0324 (1 HSPs)
scaffold0324 (11-304)||(9952-10244)
[»] scaffold1359 (3 HSPs)
scaffold1359 (14-230)||(552-767)
scaffold1359 (256-379)||(435-557)
scaffold1359 (16-220)||(1672-1865)
[»] scaffold0007 (2 HSPs)
scaffold0007 (84-251)||(143158-143325)
scaffold0007 (324-385)||(143399-143460)
[»] scaffold0043 (1 HSPs)
scaffold0043 (11-232)||(78261-78481)
[»] scaffold0471 (1 HSPs)
scaffold0471 (11-281)||(3300-3570)
[»] scaffold0015 (1 HSPs)
scaffold0015 (14-232)||(60802-61019)
[»] scaffold0176 (1 HSPs)
scaffold0176 (11-246)||(9151-9384)
[»] scaffold0414 (1 HSPs)
scaffold0414 (22-315)||(6968-7260)
[»] scaffold1331 (2 HSPs)
scaffold1331 (11-220)||(1606-1814)
scaffold1331 (255-283)||(469-497)
[»] scaffold0028 (1 HSPs)
scaffold0028 (11-198)||(5529-5717)
[»] scaffold0056 (5 HSPs)
scaffold0056 (29-288)||(36024-36281)
scaffold0056 (14-315)||(25486-25777)
scaffold0056 (255-315)||(34640-34699)
scaffold0056 (11-102)||(34827-34919)
scaffold0056 (332-385)||(35924-35977)
[»] scaffold0064 (2 HSPs)
scaffold0064 (12-201)||(43844-44032)
scaffold0064 (205-379)||(43652-43823)
[»] scaffold0261 (2 HSPs)
scaffold0261 (143-251)||(5813-5922)
scaffold0261 (324-385)||(5695-5756)
[»] scaffold0040 (2 HSPs)
scaffold0040 (28-195)||(1452-1619)
scaffold0040 (324-385)||(1246-1307)
[»] scaffold0273 (2 HSPs)
scaffold0273 (22-280)||(5634-5895)
scaffold0273 (324-383)||(8132-8195)
[»] scaffold0081 (1 HSPs)
scaffold0081 (16-385)||(40638-41014)
[»] scaffold0395 (1 HSPs)
scaffold0395 (211-356)||(13304-13447)
[»] scaffold0485 (3 HSPs)
scaffold0485 (193-281)||(9252-9338)
scaffold0485 (307-385)||(9118-9195)
scaffold0485 (256-304)||(9214-9262)
[»] scaffold0527 (2 HSPs)
scaffold0527 (46-232)||(7963-8147)
scaffold0527 (146-232)||(1-84)
[»] scaffold0050 (1 HSPs)
scaffold0050 (255-379)||(35442-35569)
[»] scaffold0025 (3 HSPs)
scaffold0025 (11-111)||(74577-74678)
scaffold0025 (307-385)||(74855-74933)
scaffold0025 (165-280)||(74718-74831)
[»] scaffold0011 (4 HSPs)
scaffold0011 (84-232)||(65324-65469)
scaffold0011 (84-232)||(144369-144514)
scaffold0011 (16-129)||(164942-165056)
scaffold0011 (257-289)||(164767-164799)
[»] scaffold0530 (1 HSPs)
scaffold0530 (31-93)||(2027-2090)
[»] scaffold0247 (4 HSPs)
scaffold0247 (11-129)||(25395-25514)
scaffold0247 (255-354)||(23350-23449)
scaffold0247 (141-232)||(23458-23546)
scaffold0247 (11-54)||(15811-15854)
[»] scaffold1747 (1 HSPs)
scaffold1747 (22-107)||(1324-1410)
[»] scaffold1745 (1 HSPs)
scaffold1745 (22-107)||(1-87)
[»] scaffold0280 (1 HSPs)
scaffold0280 (11-61)||(2795-2845)
[»] scaffold0249 (2 HSPs)
scaffold0249 (11-200)||(17700-17880)
scaffold0249 (255-315)||(17602-17661)
[»] scaffold0211 (2 HSPs)
scaffold0211 (16-129)||(15618-15732)
scaffold0211 (254-289)||(15454-15489)
[»] scaffold0066 (2 HSPs)
scaffold0066 (195-265)||(60729-60799)
scaffold0066 (307-357)||(60654-60704)
[»] scaffold0473 (2 HSPs)
scaffold0473 (11-61)||(2756-2806)
scaffold0473 (255-302)||(2551-2598)
[»] scaffold0607 (1 HSPs)
scaffold0607 (11-52)||(6002-6043)
[»] scaffold0387 (1 HSPs)
scaffold0387 (11-68)||(7377-7434)
[»] scaffold0275 (1 HSPs)
scaffold0275 (258-315)||(8511-8567)
[»] scaffold0045 (1 HSPs)
scaffold0045 (11-60)||(87666-87715)
[»] scaffold0916 (1 HSPs)
scaffold0916 (334-385)||(2387-2438)
[»] scaffold0422 (1 HSPs)
scaffold0422 (324-378)||(12057-12112)
[»] scaffold0352 (1 HSPs)
scaffold0352 (11-61)||(886-935)
[»] scaffold0201 (1 HSPs)
scaffold0201 (335-385)||(19359-19409)
[»] scaffold0016 (1 HSPs)
scaffold0016 (254-315)||(937-997)
[»] scaffold0908 (1 HSPs)
scaffold0908 (343-379)||(3617-3653)
[»] scaffold0269 (1 HSPs)
scaffold0269 (324-379)||(7617-7673)
[»] scaffold0018 (1 HSPs)
scaffold0018 (27-59)||(6589-6621)


Alignment Details
Target: scaffold0411 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 12205 - 12580
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||| ||||||||||||| ||||||    
T  12205 agcagagacacaatctgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgctttcaaa 12304  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |  |||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |   |||    
T  12305 ttctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaattcattgaacagcctttgaagctttaagtcttgtgtct 12404  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||| | |||||||| ||| ||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  12405 cctgatgaactagagcttctggtgatcctcaacttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcagctcaggagcacttttatctt 12504  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12505 caggagaacttttattcaaatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 12580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 96)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 30666979 - 30667353
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| || |||||||||||||||||||||    
T  30666979 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagatcaagcatccaatgccttcaaa 30667078  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || | |||||    
T  30667079 tcctttcaaaatagtcgttgcttcattcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaattcttgcatct 30667178  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||||||||||||| |  |||||||||||| ||||||||||||||| |||||||||||||||||||| ||||  |||||| ||| |||| |||    
T  30667179 cctgatgaactacaacttctgatattcttcagcttctgatgagatgcttctgacgaacttgcttctgatgacgtcatcacttcaggagcac-tttgactt 30667277  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    | |||| ||| || ||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||    
T  30667278 cgggagcacttctcttcagatgcttcaagcttcctttttgttgattcaattgctctctattgttcttccagaacct 30667353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 20568860 - 20568485
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  20568860 agcagatacacaaactgagtagtggggatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 20568761  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||| || |||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||    
T  20568760 tcctttcaaaattgttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccatggaacagcctttaaagctttaagtcttgcatct 20568661  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||||||  ||||||| |||| |||| || ||||||||||||    
T  20568660 cctgatgaactacagcttctggtgatcttgaacttcttatgagatgcttctgatgaacttgcttcaaatgacgtcatcacctcatgagcacttttgtctt 20568561  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| |||  | |||||| |  | |||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  20568560 caggagcacttatcttcagacgtcttaagcttcctttttgttgattcctttactctcttttgttcttcaagaacct 20568485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 23234997 - 23235371
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||| ||| ||||||||||||||||||||    
T  23234997 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgccttcaaa 23235096  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |  ||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  23235097 ttctttcaaaatagtcgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatct 23235196  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    | |||||||||| | |||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| ||||  |||||| ||| |||| |||    
T  23235197 catgatgaactagagcttctggtgattttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgactt 23235295  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    || ||| ||| || |||||| |||| |||||| |||||||||||||| ||| |||||||||||||||| |||||||    
T  23235296 caagagcacttctcttcagacgctttaagcttactttttgttgattcaattgctctcttttgttcttctagaacct 23235371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 22188212 - 22187855
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  22188212 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattatactttgttaacgctcttcaaagaacaagcatccaatgccttcaaa 22188113  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    ||  ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| |    
T  22188112 tctattcaaaatagttgttgcttcactctttcagtcttctgcaatacttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatgt 22188013  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||                  |||    
T  22188012 cctgatgaacttcaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatca------------------ctt 22187931  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || |||||||||||||||||||||||||| ||||||| || |||| ||||||||||||| |||||    
T  22187930 caggagcacttctcttcagatgcttcaagcttcctttttgctgattcctttgctctattttgttcttccataacct 22187855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 9015478 - 9015107
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| || ||| ||||| ||| ||||||||||||| ||||||    
T  9015478 agcagagatacaaactgagtagtggagatagtggttgtacac--cgtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgctttcaaa 9015381  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | |||||    
T  9015380 tcctttcaaaatagttgttgtttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttgaagctttaagtcttgcatct 9015281  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||  |  ||||||  |||||| |||||| ||||| || ||||||||||||||||||||||||||| ||||  ||||||||||||||  |||    
T  9015280 cctgatgaactttagtttctgg-gatcttctgcttctgatgagttgtttctgatgaacttgcttctgatgacgtcatcacttcaggatcactttt-actt 9015183  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    || ||| ||| || |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  9015182 caagagcacttctcttcagatgcttcaagcttccattttgttgattcctttgctctcttttgttcttccagaacct 9015107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 25037369 - 25037004
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||| ||||| |||||| |||||||||| ||||||    
T  25037369 agcagagacacaaactgagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaacaaacatccaatgctttcaaa 25037270  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||||||||   |||||||| |||||||||||||||||| ||| ||||| ||||||||||||| |||||||||||||||||| | |||||    
T  25037269 tcctttcaaattagtcgttacatcactcttccagtcttctgcaatgcttcgacaagattgaatccattgaacaacctttgaagctttaagtcttgcatct 25037170  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||          ||| || ||||| |||    
T  25037169 cctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgt---------gggagca-ttttgactt 25037080  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    || ||| ||| || ||||||||||| ||||||| |||||||||||||| || ||||||||| ||||||||||||||    
T  25037079 catgagcacttctcttcagatgctttaagcttcgtttttgttgattcctttgctctctttttttcttccagaacct 25037004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 25041476 - 25041111
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||| ||||| |||||| |||||||||| ||||||    
T  25041476 agcagagacacaaactgagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaacaaacatccaatgctttcaaa 25041377  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||||||||   |||||||| |||||||||||||||||| ||| ||||| ||||||||||||| |||||||||||||||||| | |||||    
T  25041376 tcctttcaaattagtcgttacatcactcttccagtcttctgcaatgcttcgacaagattgaatccattgaacaacctttgaagctttaagtcttgcatct 25041277  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||          ||| || ||||| |||    
T  25041276 cctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgt---------gggagca-ttttgactt 25041187  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    || ||| ||| || ||||||||||| ||||||| |||||||||||||| || ||||||||| ||||||||||||||    
T  25041186 catgagcacttctcttcagatgctttaagcttcgtttttgttgattcctttgctctctttttttcttccagaacct 25041111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 21537358 - 21536985
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaaa 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| || |||||||||||||||| ||||    
T  21537358 agcaaagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccaatgcctccaaa 21537259  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
     | ||||||||||||||||| |||||||||   ||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||| | |||||    
T  21537258 acctttcaaaatagtcgttgcttcactcttctggtcttctgcaatgtttaaacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 21537159  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||| || ||||| || ||||| | ||||| ||||| |||||||| ||| ||||||||||||||||| || |  |||||| |||  | | |||    
T  21537158 cctgatgaacttcatcttctagtgatctttaacttctgatgaggtgcttctggtgagcttgcttctgatgacgtcattacttcaggagcac--tagactt 21537061  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || |||||||  || ||| |||||||||||||||| |||  |||||||||||||||||| |||||    
T  21537060 caggagcacttctcttcagatattttaagtttcctttttgttgatttcatagctctcttttgttcttccaaaacct 21536985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 24850776 - 24850402
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||| |||||||||||||  ||||||||||||| |||||||| ||||||||||| || ||| ||||| ||||||||||||||||| || |||    
T  24850776 agcagagacacacactgagtagtggatgtagtggttgtacatttcgtacacttgtactttgtcaacgctcttcaaagaacaagcatccaatgctttgaaa 24850677  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatc 208  Q
    || |||||||||| |||||| |||||||||   |||||| ||||||| ||||||||||||||||||||||||| || |||||||||||||||| | ||||    
T  24850676 tcctttcaaaatattcgttgcttcactcttctggtcttcagcaatgcgtagacgagattaaatccattgaacaaccttttgaagctttaagtcttgcatc 24850577  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    |||||||| ||| || | |||||| ||||| ||||||| ||||| |||||||||||||||||||||||| ||||| || |  |||||| |||  ||| ||    
T  24850576 tcctgatgtacttcagcatctggtgatctttagcttctgatgaggtgcttctgatgaacttgcttctgacgacgtcattacttcaggagcac--ttgact 24850479  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||| |||  | |||||||||||||||||||||||||||||||||| |  |||||||||||||||| |||||||    
T  24850478 tcaggagcacttttcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttcgagaacct 24850402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 47 - 385
Target Start/End: Original strand, 22260432 - 22260769
Alignment:
Q  47 gtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtc 145  Q
    ||||||||| |||||||||||| ||| |||||| ||||| ||||||||||||| | |||||||||| || ||||||| | |||| |||||| || |||||    
T  22260432 gtacacttcttacaattgtactatgtcaaagctcttcaaagaacaagcatccagttccttcaaatccttccaaaatatttgttgcttcacttttccagtc 22260531  T
Q  146 ttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttc 245  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| | ||||||||||||| ||  |||||||||| ||||||  ||||    
T  22260532 ttctgcaatgcttagacgagattaaatccattgaacaacttttgacgctttaagtcttgcatctcctgatgagctttaacttctggtgatcttc--cttc 22260629  T
Q  246 ttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctt 345  Q
    | ||||||||||| |||||||||||||||||||||||| ||||  |||||| || ||||||||||||||| ||| || |||||| || | || |||||||    
T  22260630 tgatgagatgcttttgatgaacttgcttctgatgacgtcatcacttcaggagcatttttgtcttcaggagcacttctcttcagacgccttaaacttcctt 22260729  T
Q  346 tttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||| || |||||||||||||||| |||||||    
T  22260730 tttgttgattcctttgctctcttttgttcttctagaacct 22260769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 25829124 - 25829352
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  25829124 agcagagacacaaaatgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 25829223  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||    
T  25829224 tcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacatcctttgaagctctaagtcttgcatct 25829323  T
Q  210 cctgatgaactacaacttctggttatctt 238  Q
    |||||||||||  | |||||||| |||||    
T  25829324 cctgatgaactttagcttctggtgatctt 25829352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 13964088 - 13963860
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  13964088 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 13963989  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |  ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| || | |||||    
T  13963988 ttctttcaaaatagtcgttgcttcactctttcagtcttctacaatgcttagacgagattaaatccattgaacaacctttgaagctttaaatcttgcatct 13963889  T
Q  210 cctgatgaactacaacttctggttatctt 238  Q
     ||||||||||| | ||||| || |||||    
T  13963888 actgatgaactagagcttctagtgatctt 13963860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 11 - 302
Target Start/End: Complemental strand, 10009860 - 10009569
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| || | | ||||| ||||||||||||||||| ||||||    
T  10009860 agcagagacacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactatgtcaacgttcttcaaagaacaagcatccaatgctttcaaa 10009761  T
Q  110 tcatttcaaaatagtcgttgtttcactctt-tcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    || |||||||||||| |||| ||||||| | |  ||||| |||||||||| ||||||||| |||||||||||||||| ||||||||||||||| | ||||    
T  10009760 tcctttcaaaatagttgttgcttcactcctcttggtcttttgcaatgcttggacgagattgaatccattgaacagcccttgaagctttaagtcttgcatc 10009661  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactt 302  Q
    |||||||||||| || |||||||| |||||   ||||| |||||||||||||||||||||||||||||||||||| ||||  |||||| |||||    
T  10009660 tcctgatgaacttcagcttctggtgatctt--tcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 10009569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 18377016 - 18376775
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  18377016 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 18376917  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||| ||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||    
T  18376916 tcctttcaaaatagtagttgattcactattaaaatcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtctctcatct 18376817  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
     |  ||||||| ||||||||||| |||||| |||||| ||||    
T  18376816 tcaaatgaacttcaacttctggtgatcttctgcttctgatga 18376775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 38781388 - 38781744
Alignment:
Q  11 agcagagacacaaact-gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaa 108  Q
    |||||||||| ||| | ||||||||||  |||||||||||||||||||||||||||||||||| || ||| ||  |||||||| ||| ||||||||||||    
T  38781388 agcagagacaaaaaatagagtagtggatgtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaatcattcaatgccttcaa 38781487  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    ||| |||||||||||| |||| |||||| || ||||||||| || || ||||||||||||||||| |||||||| |||||||||||||||||| | ||||    
T  38781488 atcctttcaaaatagttgttgcttcacttttccagtcttctacattgtttagacgagattaaatcaattgaacaacctttgaagctttaagtcttgcatc 38781587  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
      |||||||   ||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||                  ||    
T  38781588 ctctgatga--gacatcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatca------------------ct 38781667  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||  || || ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  38781668 tcaggagcgcttctcttcagatgcttcaagcttcctttttgttgattcaattgctctcttttgttcttccagaacct 38781744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 30621210 - 30621447
Alignment:
Q  15 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcat 113  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||| || ||| ||||||||||||||||||| |    
T  30621210 gagacacaaactgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagatcaaacatccaatgccttcaaatcct 30621309  T
Q  114 ttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctg 213  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| || | |||||||||    
T  30621310 ttcaaaatagtcgctgcttcactcttccagtcttctgcaatgcttacacgagattaaatccattgaacaacctttgaacctttaattcttgcatctcctg 30621409  T
Q  214 atgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||| |||||||||||| || || |||||||||| ||||    
T  30621410 atgcactacaacttctagtgatattcagcttctgatga 30621447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 30623831 - 30624068
Alignment:
Q  15 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcat 113  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||| || ||| ||||||||||||||||||| |    
T  30623831 gagacacaaactgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagatcaaacatccaatgccttcaaatcct 30623930  T
Q  114 ttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctg 213  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| || | |||||||||    
T  30623931 ttcaaaatagtcgctgcttcactcttccagtcttctgcaatgcttacacgagattaaatccattgaacaacctttgaacctttaattcttgcatctcctg 30624030  T
Q  214 atgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||| |||||||||||| || || |||||||||| ||||    
T  30624031 atgcactacaacttctagtgatattcagcttctgatga 30624068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 40782467 - 40782806
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| || ||| ||||| |||||| |||||||||| ||||||    
T  40782467 agcagagacacaaactaagtattggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgctttcaaa 40782566  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||| |   ||||| |||||||||| ||||||||| |||||||||||     |||  |||| |||||| | |||||    
T  40782567 tcctttcaaaatagtcgttgcttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaa----attt--agctctaagtcttgcatct 40782660  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||| |  | |||||||| |||||  |||||| |||| ||||||||| ||||||||||||||||||||| ||||  |||||| ||||||    ||    
T  40782661 cctgatgaaatttagcttctggtgatctt--gcttctgatgaaatgcttctggtgaacttgcttctgatgacgtcatcacttcaggagcactttgacttt 40782758  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattcc 357  Q
    |||||| ||| || ||||||||||||||||||||||||||||||||||    
T  40782759 caggagcacttctcttcagatgcttcaagcttcctttttgttgattcc 40782806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 265
Target Start/End: Original strand, 19540406 - 19540659
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| || || ||||||||||||||| ||||||||    
T  19540406 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaataccttcaaa 19540505  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
     | |||| |||||| ||||| ||||||||   |||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||| | |||||    
T  19540506 acctttcgaaatagccgttgcttcactctcctagtcttctgcaatgcttagatgagattaaatccattgaacaacatttgaagctttaagtcttgcatct 19540605  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatga 265  Q
    | ||||||||| || |||||||| |||||  |||||| ||||| ||||||||||||    
T  19540606 catgatgaacttcagcttctggtgatctt--gcttctgatgaggtgcttctgatga 19540659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 11 - 281
Target Start/End: Original strand, 24576025 - 24576295
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||  || ||||| |||||| || |||||||||| |||    
T  24576025 agcagagacacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaactctcttcaacgaacaaacaaccaatgcctttaaa 24576124  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgaga-ttaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    || |||||||||||| |||| |||||| || ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||  | ||||    
T  24576125 tcctttcaaaatagttgttgcttcacttttccagtcttctgcaatgcttagatgagatttaaatccattgaacaacctttgaagctttaagtattgcatc 24576224  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgac 281  Q
    |||| |||||||  | |||||||| |||||  |||| | |||| |||||||||||||||| ||||||||||||    
T  24576225 tcctaatgaactttagcttctggtgatctt--gcttatgatgatatgcttctgatgaactagcttctgatgac 24576295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 22455100 - 22454726
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||| || ||||||||||||||||||||     
T  22455100 agcagagacacaaactgagtagtggaggtactggttgtacacttcgtacaattgtactttgtcaacgcttttcaaaaagcaagcatccaatgccttcaac 22455001  T
Q  110 t-catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagccttt-gaagctttaagtcctacat 207  Q
    | ||||| ||   | | |||| |||||||||   ||||||||||||| || | || |||||||||||||||||| ||||| |||||||||||||   |||    
T  22455000 ttcatttgaattaact-gttgcttcactcttctggtcttctgcaatg-ttgggcgtgattaaatccattgaacacccttttgaagctttaagtctctcat 22454903  T
Q  208 ctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtc 307  Q
    || |||| ||||| || |||||||| ||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||  ||| || |||  | | |    
T  22454902 cttctgaagaacttcagcttctggtgatcttcagcttctgatgaggtgcttctgatgagcttgcttctgacgacgttatcacttcaagagcac--tagac 22454805  T
Q  308 ttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactc-tcttttgttcttccagaacct 385  Q
    |||||||| |||  | |||||||||||||||||||||||||||||||| |||  ||| |  ||||||||||||||||||    
T  22454804 ttcaggagcacttttcttcagatgcttcaagcttcctttttgttgatttcatagctcttaatttgttcttccagaacct 22454726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 22317583 - 22317976
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||| | ||||||| |||||||| ||||||||||| |||||||||||||||||||||| || ||| ||  |||||||||||||||||||||| |||    
T  22317583 agcagagataaaaactgaatagtggaggtagtggttgtatacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctttaaa 22317682  T
Q  110 tcatttcaaaa-tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    || |||||||| ||||||||| |||||||||  |||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||||| | ||||    
T  22317683 tcctttcaaaaatagtcgttgcttcactcttctagtcttatgcaatgcttagatgagattaaatccaatgaaaagcctttgaagctttaagtcttgcatc 22317782  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt---- 303  Q
    || ||||||| || | |||||||| || |||||||||| ||| |  ||||| |||||||||||||| ||||||||| | ||  |||||| ||||||        
T  22317783 tcttgatgaaatagagcttctggtgattttcagcttctgatgtacttgcttatgatgaacttgcttatgatgacgtcaccacttcaggagcactttgtct 22317882  T
Q  304 ------------tgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
                || ||||||||| | | || |||||| |||| |||||||||||||||||||||| || |||||| ||||||||| |||||||    
T  22317883 tcagtagcactttgacttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttctagaacct 22317976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 24377091 - 24377332
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||| |||||||||||||||||||  |||||    
T  24377091 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctctcaaa 24377190  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatc 208  Q
     | ||||||||||||||||| |||||||||   |||||||||||||| ||| || |||||||||||||||||| || |||||||||||||||| | ||||    
T  24377191 acctttcaaaatagtcgttgcttcactcttctggtcttctgcaatgc-taggcgtgattaaatccattgaacaaccttttgaagctttaagtcttgcatc 24377289  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    || ||||||||| || |||||||| ||||| ||||||| ||||    
T  24377290 tcttgatgaacttcagcttctggtgatctttagcttctgatga 24377332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 28140729 - 28140399
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||| ||| || ||| ||| ||||||||||||||||||  ||||||    
T  28140729 agcagagacacaaactgagtagtggagatagtgatggtacactttgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgttttcaaa 28140630  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||||      |||| |||||||||| ||||||||| ||||||||||||| ||||||||| |||||||| | |||||    
T  28140629 tcctttcaaaatagttgttgcttcactccaatgatcttttgcaatgcttggacgagattgaatccattgaacaacctttgaagttttaagtcttgcatct 28140530  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    || ||||||                 ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||  |||||| |||||||| |||    
T  28140529 cccgatgaa-----------------cttcagcttctgatgagatgcttctgatgaacttgcttttgatgacgtcatcacttcaggagcacttttgactt 28140447  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattcc 357  Q
    |||||| ||| || |||||| | |  ||||||||||||||||||||||    
T  28140446 caggagcacttctcttcagacgttctaagcttcctttttgttgattcc 28140399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 39037752 - 39037392
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaa- 108  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||| || |||||||| |||||||||||     
T  39037752 agcagagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatctaatgccttcaac 39037653  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
     ||||||  || ||| ||||| |||||| |   | |||||||||||||||||||||||| ||||||| |||||| ||||||||| ||||||||   ||||    
T  39037652 ttcattt-gaattagccgttgcttcactttcctaatcttctgcaatgcttagacgagatcaaatccaatgaacaacctttgaagttttaagtctctcatc 39037554  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    | ||||| ||||  |||||| ||| |||||||              ||||||||||||||||||||||||||||| ||||  |||| | |||  ||  ||    
T  39037553 ttctgatcaactttaacttccggtgatcttca--------------gcttctgatgaacttgcttctgatgacgtcatcacttcagaagcac--ttaact 39037470  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctc-ttttgttcttccagaacct 385  Q
    |||| || ||| || ||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||||||||    
T  39037469 tcagtagcacttctcttcagatgcttcaagcttcctttttgttgattccatagctctcaatttgttcttccagaacct 39037392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 39 - 379
Target Start/End: Complemental strand, 20152117 - 20151792
Alignment:
Q  39 tagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactc 137  Q
    |||||||||||||||||||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||| ||||||| ||  ||||| ||||||     
T  20152117 tagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaactaaccgttgcttcactt 20152018  T
Q  138 tttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatct 237  Q
    || |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |  | ||||||||||||| || || |||||||| || |    
T  20152017 ttccagtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaagctttaa-tgttgcatctcctgatgagctgcagcttctggtgattt 20151919  T
Q  238 tcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaa 337  Q
    |||              |||||||||||||||| |||||||||||| |  |  |||||| ||| |||||||||||||| | |  | |||||| |||| ||    
T  20151918 tca--------------gcttctgatgaacttgtttctgatgacgtcactatttcaggagcac-tttgtcttcaggagcagttttcttcagacgctttaa 20151834  T
Q  338 gcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||||||||||||| ||| | || |||||| |||||||||||    
T  20151833 gcttcctttttgttaattactttgctctctattgttcttcca 20151792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 251
Target Start/End: Complemental strand, 6574223 - 6573993
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaatt-gtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaa 119  Q
    |||| ||||||||||| ||||||||||||||||||||||||| ||||||||| || ||| ||  |||||||| ||||||||||||||||||| |||||||    
T  6574223 aaacagagtagtggaggtagtggttgtacacttcgtacaatttgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaa 6574124  T
Q  120 atagtcgttgtttcactctttcagtcttctgcaatgc-ttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaa 218  Q
     ||||||||| |||||| || |||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||  | ||||| ||||||||    
T  6574123 ctagtcgttgcttcacttttccagtcttctgcaatgcattagacgagattaaatcaattgaacaacctttgaagctttatgt--tgcatcttctgatgaa 6574026  T
Q  219 ctacaacttctggttatcttcagcttcttatga 251  Q
    || |||||||| || || |||||||||| ||||    
T  6574025 ctgcaacttctagtgattttcagcttctgatga 6573993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 11 - 315
Target Start/End: Original strand, 33074216 - 33074519
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| | ||| || | | ||  ||||| ||||||| ||||||||| ||    
T  33074216 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaatcgtattatgtcaacgttttttgaagaataagcatctaatgccttccaa 33074315  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    ||  | |||||||||||||| |  ||| || ||||||||||||||  ||||||||| || ||||| || |||||| ||||||| |||||||  | |||||    
T  33074316 tctgtccaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcctttaaacagcttttgaagttttaagt--tgcatct 33074413  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    |||||||||||||||||||| || ||  ||||||||| ||  |  |||||||||||||||||||||||||||||| ||||  |||||| ||| |||||||    
T  33074414 cctgatgaactacaacttctagtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtct 33074512  T
Q  309 tcaggag 315  Q
    |||||||    
T  33074513 tcaggag 33074519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 24779333 - 24779524
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| ||  || ||||| |||||| ||||| |||| ||||||    
T  24779333 agcagagacacaaactgagtagtggagatagtggttatacacttcatacaattgtactatgtcaacactcttcaaagaacaaacatccgatgctttcaaa 24779432  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc 201  Q
    || ||||||||||||||||| ||||||| |   ||||| | |||||||| ||||||||| ||||||||||||| |||||||||||| |||||    
T  24779433 tcctttcaaaatagtcgttgcttcactcctctggtctttttcaatgcttggacgagattgaatccattgaacaacctttgaagcttcaagtc 24779524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 23595677 - 23595427
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttca-agaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| || ||  |||| |||||||| ||||||||||||||||    
T  23595677 agcagagacacaaactgagtagaggaggtagtggttctacacttcgtacaattgtactttgtcaacgc--ttcagagaacaagaatccaatgccttcaaa 23595580  T
Q  110 -tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
     ||||||  || ||||||||| |||||||||   |||||||||||||| |||  | |||||||||| ||||||| ||||||||||||||| || | ||||    
T  23595579 ttcattt-gaattagtcgttgcttcactcttctggtcttctgcaatgc-taggtgtgattaaatcctttgaacaacctttgaagctttaattctttcatc 23595482  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatga 265  Q
    | ||||||| || || |||||||| | |||  |||||| ||||| ||||||||||||    
T  23595481 ttctgatgatcttcagcttctggtgaactt--gcttctgatgaggtgcttctgatga 23595427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 41121829 - 41121577
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||||| || ||| ||| |||| |||  ||||||||||||||||    
T  41121829 agcagagacacaaacagagtagtggaggtagtggttgtacatttcgcacaattgtactttgtcaatgctcttcaaagagcaataatccaatgccttcaaa 41121730  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||  || ||||| ||| ||||||| | || ||||||||||||| ||| || |||||||||| ||||||||||||||||||||||| ||  ||| ||    
T  41121729 tccttttgaattagtctttgcttcactcatccaatcttctgcaatgc-taggcgtgattaaatcctttgaacagcctttgaagctttaattctcacagct 41121631  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatga 265  Q
     ||||||| || || |||||||| || ||  |||||| ||||| ||| ||||||||    
T  41121630 tctgatgatcttcagcttctggtgatgtt--gcttctgatgaggtgcatctgatga 41121577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 31800997 - 31800807
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||| || |||  || |||| ||| |||||||||| ||||||    
T  31800997 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaatgtactttgtcaacgctctttgaagatcaaacatccaatgctttcaaa 31800898  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagt 200  Q
    || |||||||||||| ||||||||||| || ||||||||||||||   |||||||| ||  ||||| | | |||| |||||||||||||||    
T  31800897 tcctttcaaaatagttgttgtttcacttttccagtcttctgcaataaatagacgagtttggatccactaagcagcttttgaagctttaagt 31800807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 98 - 276
Target Start/End: Original strand, 7609039 - 7609216
Alignment:
Q  98 aatgccttcaaatcatttcaaaatagtcgttgtttcactctt-tcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagcttt 196  Q
    |||||||||||||| |||||||||||  |||| ||||||| | |  ||||| || ||||||| ||||||||| |||||||||||||||| ||||||||||    
T  7609039 aatgccttcaaatcctttcaaaataggtgttgcttcactcctcttggtcttttgtaatgcttggacgagattgaatccattgaacagcccttgaagcttt 7609138  T
Q  197 aagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctg 276  Q
    ||||| | ||||||||||||||||  | |||||||| |||||  |||||| |||||||||||||||||||||||||||||    
T  7609139 aagtcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttctg 7609216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 255 - 385
Target Start/End: Original strand, 25829338 - 25829468
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgat 354  Q
    ||||||| ||| ||||||||||||||||| ||||  |||||| |||||||||||||||||| ||| || |||||| |||| |||||||||||||||||||    
T  25829338 gcttctggtgatcttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgctttaagcttcctttttgttgat 25829437  T
Q  355 tccattactctcttttgttcttccagaacct 385  Q
    ||| || ||||||||||||||||||||||||    
T  25829438 tcctttgctctcttttgttcttccagaacct 25829468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 28711808 - 28711618
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||| | || ||| ||  ||||||||||||||||||||||||||    
T  28711808 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaa 28711709  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagt 200  Q
    |   ||| |||||||||||| || ||| || ||||||||||||||  |||||| || || |||||||| |||||| |||||||| ||||||    
T  28711708 ttcattcgaaatagtcgttgctttacttttccagtcttctgcaatctttagacaaggttgaatccattaaacagcttttgaagccttaagt 28711618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 6392624 - 6392814
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaa 108  Q
    |||||||||| |||| ||||||||||| |||||||||  ||||||||||||  ||||||||| || ||| ||   | ||||||||||||||||| |||||    
T  6392624 agcagagaca-aaacagagtagtggaggtagtggttgcgcacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaa 6392722  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatc-cattgaacagcctttgaagctttaag 199  Q
    ||| ||||||||||||||||| |||||| || |||||||||||||| |||||||||| || |||| |||| |||||| |||||||| |||||    
T  6392723 atcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcacattaaacagcttttgaagccttaag 6392814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 14 - 201
Target Start/End: Original strand, 25189391 - 25189578
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaa-atc 111  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||| || ||| ||||| || |||| |||||||||||||||  ||    
T  25189391 agagacacaaattgagtagtggaggtagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaaaagcaagaatccaatgccttcaacttc 25189490  T
Q  112 atttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc 201  Q
    ||||  || ||||| ||| ||||||||    |||||||||||||| |||  | |||||||||||||||||| ||||||||||||||||||    
T  25189491 attt-gaattagtcattgcttcactctcctggtcttctgcaatgc-taggtgtgattaaatccattgaacaacctttgaagctttaagtc 25189578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 314
Target Start/End: Original strand, 22802451 - 22802750
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| ||  || ||  ||||| |||||||  |||||||||||    
T  22802451 agcagagaca-aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaactctctttgaagaataagcatcatatgccttcaaa 22802549  T
Q  110 tcatttcaaaatagtcgttgtttcactctttc-agtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    || ||||||||||| | ||| || || ||||| |||||||||||||  ||||||||| || |||||||| || ||| |||||| ||||||||  | ||||    
T  22802550 tcctttcaaaatagccattgctttac-ctttctagtcttctgcaatctttagacgagtttgaatccattaaatagcttttgaatctttaagt--tgcatc 22802646  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtc 307  Q
    |||||||||||| ||  ||||| | | |||  |||||| ||| |  | |||||||||| ||||||||||||||||| ||||  |||||| ||| ||||||    
T  22802647 tcctgatgaactgcaggttctgataaactt--gcttctgatgaattttcttctgatgaccttgcttctgatgacgtcatcacttcaggagcac-tttgtc 22802743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 27 - 280
Target Start/End: Complemental strand, 30557415 - 30557160
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaaatcatttcaaaatagt 124  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||   | ||||||||||||||||  |||||||  ||||||||||||    
T  30557415 gagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgtgttcaaattctttcaaaatagt 30557316  T
Q  125 cgttgtttcactctttcagtcttctgcaatgcttagacgagattaaat-ccattgaacagcctttgaagctttaagtcctacatctcctgatgaactaca 223  Q
    || || |||||| |||||||| |||||||| |||||||||| || ||| ||||| ||||   |||||||| ||||||  | ||||  |||||||||| ||    
T  30557315 cgatgcttcactttttcagtcctctgcaatccttagacgaggttgaatcccattaaacaatttttgaagccttaagt--tgcatcctctgatgaactgca 30557218  T
Q  224 acttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatga 280  Q
     |||||||| || || ||||||| ||| |  ||||||||||||||| |||| ||||||    
T  30557217 gcttctggtgatatttagcttctgatgaacttgcttctgatgaactcgcttttgatga 30557160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 28 - 385
Target Start/End: Original strand, 22272139 - 22272493
Alignment:
Q  28 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaag--aacaagcatccaatgccttcaaatcatttcaaaatagtc 125  Q
    |||||||||||||||||||||||||||| ||||||| | |||| | ||  || | |||   || ||||||||||||||||||||||  ||  || |||||    
T  22272139 agtagtggagatagtggttgtacacttcttacaattttcctttttcaactctctccaacgaaaaaagcatccaatgccttcaaatccatttgaattagtc 22272238  T
Q  126 gttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaac 225  Q
     ||| |||| |||| ||||||||||||||| | ||||| |||||||||  ||||||| |||||||| ||  || ||   || || ||||||| || || |    
T  22272239 attgcttcattcttccagtcttctgcaatgat-agacgtgattaaatcatttgaacaacctttgaaactccaattctctcagcttctgatgatcttcagc 22272337  T
Q  226 ttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctatt 325  Q
    ||||||| || ||  |||||| ||||| || |||||||||||||| |||| ||||||| ||||  ||||||  |  |||| |||||| |   ||  | ||    
T  22272338 ttctggtgatgtt--gcttctgatgaggtgtttctgatgaacttgtttctaatgacgtcatcacttcaggagta--tttgacttcagaaactcttttctt 22272433  T
Q  326 cagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| |||||||| ||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  22272434 cagttgcttcaaccttccttcttgttgattccattgctctcatttgttcttccagaacct 22272493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 27 - 280
Target Start/End: Complemental strand, 34322030 - 34321777
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtc 125  Q
    |||||||| |||||||||||||||||||| |||||  ||||| ||| || ||| ||  ||||| ||| ||||||||||||  |||| |||||||||||||    
T  34322030 gagtagtgaagatagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaagaataagaatccaatgcctttcaatcctttcaaaatagtc 34321931  T
Q  126 gttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaac 225  Q
    |||| |  ||| || ||| ||||||||||  ||||||||| || ||||| || |||||| ||||| |||||||||  | |||||||||||||| |||| |    
T  34321930 gttgctatacttttccaggcttctgcaatctttagacgagtttgaatcctttaaacagcttttgaggctttaagt--tgcatctcctgatgaattacagc 34321833  T
Q  226 ttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatga 280  Q
    |||| || ||  ||||||||| ||  |  |||||||||||||||||||| ||||||    
T  34321832 ttctagtgattctcagcttctgataaacttgcttctgatgaacttgcttatgatga 34321777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 281
Target Start/End: Complemental strand, 35744110 - 35743842
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||||||||||||||||||| |||||||| |||||||||  ||||| ||| || |||  || |||||  ||||| |||||||||||||    
T  35744110 agcagagacaaaaactgagtagtggagatagtagttgtacatttcgtacaaacgtactatgtcaacgctctttgaagaattagcattcaatgccttcaaa 35744011  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || |||||||||||||| |  ||| || || | |||||||||  ||||||  | || | ||  || |||| | ||||| |||||||||  | |||||    
T  35744010 tccttccaaaatagtcgttgctatacttttccaatattctgcaatctttagac--gtttgagtctgttaaacaacttttgacgctttaagt--tgcatct 35743915  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgac 281  Q
    |||||||||||||| |||||||| || |||||||||  ||  |  ||||||||||||||||||||||||||||    
T  35743914 cctgatgaactacagcttctggtgattttcagcttccgataaacttgcttctgatgaacttgcttctgatgac 35743842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 195
Target Start/End: Complemental strand, 26619200 - 26619027
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||| | || | | | | ||||| |||||| ||||||||||||||  |||  |||    
T  26619200 aaacagagtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacgttctccaaagaataagcattcaatgccttcaaattcttttgaaa 26619101  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctt 195  Q
    |||| |||| |||| |||| |||||||||||||||  ||| || |||||||||  ||||||| ||||||||||||    
T  26619100 tagttgttgcttcattcttccagtcttctgcaatg-ataggcgtgattaaatcatttgaacaacctttgaagctt 26619027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 174
Target Start/End: Complemental strand, 45087266 - 45087130
Alignment:
Q  39 tagtggttgtacacttcgtacaattgtactttgttaaagctgttca-agaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactc 137  Q
    |||||||||||||||||||||||  ||||||||| || ||| ||   |||| ||||||| ||||| |||||||| ||||||||||||||||| ||||||     
T  45087266 tagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgagaataagcatctaatgcattcaaatcctttcaaaatagtcgttgcttcactt 45087167  T
Q  138 tttcagtcttctgcaatgcttagacgagattaaatcc 174  Q
    || |||||||||||||| |||||||||| || |||||    
T  45087166 ttccagtcttctgcaatccttagacgaggttgaatcc 45087130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 28701339 - 28701119
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    ||||| |||| ||||  |||||||||| || ||||||||||||||||||||   |||||||| || ||  ||  ||||||||||||||||||||||||||    
T  28701339 agcagggacaaaaacaaagtagtggaggtaatggttgtacacttcgtacaaacttactttgtcaacgccctttgaagaacaagcatccaatgccttcaaa 28701240  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||   |||| || ||| || ||||||||||||||  | ||||||| || |||| ||| |||||| |||||||| ||||||  | ||||     
T  28701239 tcctttcaaaatatctgttgctttacttttccagtcttctgcaatcttaagacgaggttgaatctattaaacagcttttgaagccttaagt--tgcatcc 28701142  T
Q  210 cctgatgaactacaacttctggt 232  Q
    | ||||||||| || ||||||||    
T  28701141 catgatgaactgcagcttctggt 28701119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 280
Target Start/End: Complemental strand, 31328075 - 31327806
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||| | |   |||||||| || ||| ||  ||||||||||||||||||| ||||||    
T  31328075 agcagagaca-aaacagagtagtggaggtagtggttgtacacttcgttcgaacatactttgtcaacgctctttgaagaacaagcatccaatgctttcaaa 31327977  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagc-ctttgaagctttaagtcctacatc 208  Q
     |  | |||||||||||||| ||||||  |  |||||||||||||  |||| |||| || ||||| ||||||| |  |||||| ||||||||  | ||||    
T  31327976 accctccaaaatagtcgttgcttcacttctctagtcttctgcaatctttaggcgagtttgaatccgttgaacaactttttgaaactttaagt--tgcatc 31327879  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatga 280  Q
    |||||||||||| || |||||||| ||   |||||||| ||  |  ||||||||||||||| |||| ||||||    
T  31327878 tcctgatgaactgcagcttctggtgattcacagcttctgataaacttgcttctgatgaactagcttatgatga 31327806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 280
Target Start/End: Complemental strand, 31334796 - 31334527
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||| | |   |||||||| || ||| ||  ||||||||||||||||||| ||||||    
T  31334796 agcagagaca-aaacagagtagtggaggtagtggttgtacacttcgttcgaacatactttgtcaacgctctttgaagaacaagcatccaatgctttcaaa 31334698  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagc-ctttgaagctttaagtcctacatc 208  Q
     |  | |||||||||||||| ||||||  |  |||||||||||||  |||| |||| || ||||| ||||||| |  |||||| ||||||||  | ||||    
T  31334697 accctccaaaatagtcgttgcttcacttctctagtcttctgcaatctttaggcgagtttgaatccgttgaacaactttttgaaactttaagt--tgcatc 31334600  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatga 280  Q
    |||||||||||| || |||||||| ||   |||||||| ||  |  ||||||||||||||| |||| ||||||    
T  31334599 tcctgatgaactgcagcttctggtgattcacagcttctgataaacttgcttctgatgaactagcttatgatga 31334527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 1587142 - 1586913
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| || ||| ||  |||||  |||||||||||||||        
T  1587142 agcagagaca-aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgcctt---- 1587048  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
         ||||||||| ||||||   ||| |||||||||||||||||  | ||| ||| || ||||| || |||| | |||||||||||||||  | |||||    
T  1587047 -----tcaaaatagccgttgtaatactttttcagtcttctgcaatcttcagatgagtttgaatcctttaaacaacttttgaagctttaagt--tccatct 1586955  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||||||||| || |||||||| ||  ||||||||| ||||    
T  1586954 cctgatgaactccagcttctggtgattctcagcttctgatga 1586913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 385
Target Start/End: Original strand, 38631224 - 38631318
Alignment:
Q  291 tcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||||| |||||||||||| ||| || ||||||||||||||||||| |||||||||||| | || |||||||||||| |||||||||||    
T  38631224 tcaggagcacttctgtcttcaggagcacttctcttcagatgcttcaagcttcatttttgttgatttctttgctctcttttgtttttccagaacct 38631318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 30621437 - 30621551
Alignment:
Q  270 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttt 369  Q
    |||||||||||||| ||||  |||||| |||||| | ||||  ||| ||| || || |||||||| ||||||||||||||||||||||||| |||||| |    
T  30621437 gcttctgatgacgtcatcacttcaggagcacttt-gacttcgagagcacttctctttagatgcttgaagcttcctttttgttgattccattgctctctat 30621535  T
Q  370 tgttcttccagaacct 385  Q
    ||||||||||||||||    
T  30621536 tgttcttccagaacct 30621551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 385
Target Start/End: Original strand, 30624058 - 30624172
Alignment:
Q  270 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttt 369  Q
    |||||||||||||| ||||  |||||| |||||| | ||||  ||| ||| || || |||||||| ||||||||||||||||||||||||| |||||| |    
T  30624058 gcttctgatgacgtcatcacttcaggagcacttt-gacttcgagagcacttctctttagatgcttgaagcttcctttttgttgattccattgctctctat 30624156  T
Q  370 tgttcttccagaacct 385  Q
    ||||||||||||||||    
T  30624157 tgttcttccagaacct 30624172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 18376734 - 18376673
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  18376734 ttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 18376673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 23184414 - 23184353
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgt 72  Q
    |||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  23184414 agcagagacacaaactgagtagaggaggtagtggttctacacttcgtacaattgtactttgt 23184353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 230
Target Start/End: Original strand, 44840424 - 44840631
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||||||||||||||          
T  44840424 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcc------ 44840517  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
       |||||||||||||||||    ||| |||||||| ||||||||| |||| |||| || ||||| |  |||||| |||||||||||||||  | |||||    
T  44840518 ---tttcaaaatagtcgttgccatactttttcagtc-tctgcaatg-ttaggcgagtttgaatccttgaaacagcttttgaagctttaagt--tgcatct 44840610  T
Q  210 cctgatgaactacaacttctg 230  Q
    | ||||||||| || ||||||    
T  44840611 cttgatgaactgcagcttctg 44840631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 28551028 - 28550933
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgcctt 105  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||||||||||||||||    
T  28551028 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 28550933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 13963824 - 13963746
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||| ||| || |||||||| ||||| | ||||||||||||||||| || ||||||||||||||||||||||||    
T  13963824 cttcaggagcacttcttttcagatgtttcaaacgtcctttttgttgattcctttgctctcttttgttcttccagaacct 13963746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 24377356 - 24377426
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    ||||||||| ||| || |||||||||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  24377356 cttcaggagcacttctcttcagatgcttctagcttcctttttgttgattctattgctctcttttgttcttc 24377426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 195
Target Start/End: Original strand, 44881173 - 44881341
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtc 125  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | ||  || | |||  || || ||||||||||||||||| |  ||  || |||      
T  44881173 gagtagtggagatagtggttgtacacttcgtacaattgtcctttttcaactctctccaacaaaaaaacatccaatgccttcaaacccatttgaattagct 44881272  T
Q  126 gttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctt 195  Q
    | || |||| |||| |||||||||||||||  |||||| |||||| ||  ||||||||||||||||||||    
T  44881273 gctgcttcattcttccagtcttctgcaatg-atagacgtgattaagtcatttgaacagcctttgaagctt 44881341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 44881451 - 44881512
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||    
T  44881451 ttcagatgcttcaagcttccttcttgttgatttcattgctctcatttgttcttccagaacct 44881512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 22776398 - 22776303
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgcctt 105  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||||||||||||||||    
T  22776398 agcagagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 22776303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 22781776 - 22781681
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgcctt 105  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||||||||||||||||    
T  22781776 agcagagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 22781681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 31968153 - 31968103
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  31968153 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaa 31968103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 195
Target Start/End: Original strand, 19115089 - 19115257
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtc 125  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | ||  || | ||| ||| | ||||||| || ||||| |||  |   || ||||     
T  19115089 gagtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacactctccaacgaataggcatccactggcttcacatccatctgaattagtt 19115188  T
Q  126 gttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctt 195  Q
    |||| |||| |||| ||||||||||||||   ||| ||||||||||| | ||||||| ||||||||||||    
T  19115189 gttgcttcattcttccagtcttctgcaat-agtaggcgagattaaattctttgaacaacctttgaagctt 19115257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 19115427 - 19115488
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| |||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||    
T  19115427 ttcagacgcttcaagcttccttcctgttgattccattgctctcatttgttcttccagaacct 19115488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 24576352 - 24576413
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| ||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  24576352 ttcatatgtttcaagcttcctttttgttgattccattgctccctttttttcttccagaacct 24576413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 22258191 - 22258231
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtaca 51  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22258191 agcagagacacaaactgagtagtggagatagtggttgtaca 22258231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 14581505 - 14581600
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgcctt 105  Q
    |||||||||| || | ||| |||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||||||||||||||||    
T  14581505 agcagagacaaaatcagagaagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 14581600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 40332077 - 40332172
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgcctt 105  Q
    |||||||||| |||| ||||| ||||| |||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||||||||||||||||    
T  40332077 agcagagacaaaaacagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 40332172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 10009582 - 10009532
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattcc 357  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  10009582 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcc 10009532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 20569774 - 20569823
Alignment:
Q  336 aagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  20569774 aagcttcctttttgtagattccattgctctcatttgttcttccagaacct 20569823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 26618896 - 26618847
Alignment:
Q  332 cttcaagcttcctttttgttgattccattactctcttttgttcttccaga 381  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  26618896 cttcaagcttccttcttgttgattccattgctctcatttgttcttccaga 26618847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 379
Target Start/End: Complemental strand, 28711578 - 28711454
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcc-tttttgttga 353  Q
    ||||||||| ||||||||||||||||||| | ||  |||||| ||| |||||||||||||| | |  | |||| | |||| |||||||| ||||||||||    
T  28711578 gcttctgataaacttgcttctgatgacgtcaccacttcaggagcac-tttgtcttcaggagcagttttcttcaaacgctttaagcttccttttttgttga 28711480  T
Q  354 ttccattactctcttttgttcttcca 379  Q
    |||| || |||| | |||||||||||    
T  28711479 ttcctttgctctttattgttcttcca 28711454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 379
Target Start/End: Complemental strand, 6574003 - 6573880
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgat 354  Q
    ||||||||||||||||||||||||||||| |  |  | |||| ||| ||||||||||| || | |  | |||||||| || |||||||||||||||| ||    
T  6574003 gcttctgatgaacttgcttctgatgacgtcactactttaggagcac-tttgtcttcagaagcatttttcttcagatgttttaagcttcctttttgttaat 6573905  T
Q  355 tccattactctcttttgttcttcca 379  Q
    ||| || ||| || |||||||||||    
T  6573904 tcctttgctccctattgttcttcca 6573880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 23184161 - 23184109
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccat 359  Q
    ||||||||| |||  | ||||||||||||||||||||||||||||||||||||    
T  23184161 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattccat 23184109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 23595418 - 23595366
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccat 359  Q
    ||||||||| |||  | ||||||||||||||||||||||||||||||||||||    
T  23595418 cttcaggagcacttttcttcagatgcttcaagcttcctttttgttgattccat 23595366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 3277037 - 3277116
Alignment:
Q  28 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttc 106  Q
    ||||||||||||||||||||||||||||||||||  ||||| | | || |||  || ||||| |||||||||||||||||    
T  3277037 agtagtggagatagtggttgtacacttcgtacaaacgtactatatcaacgctctttgaagaataagcatccaatgccttc 3277116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 25189638 - 25189717
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactc-tcttttgttcttccagaacct 385  Q
    ||||||||| |||  | ||||||||||||||||||||||||||| ||||||||  ||| |  ||||||||||||||||||    
T  25189638 cttcaggagcacttttgttcagatgcttcaagcttcctttttgtcgattccatagctcttaatttgttcttccagaacct 25189717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 383
Target Start/End: Complemental strand, 41121551 - 41121492
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaac 383  Q
    |||||||||||||||||||||| ||||| |||||||| || || |||||||||| |||||    
T  41121551 ttcagatgcttcaagcttccttcttgtttattccattgctttcatttgttcttcgagaac 41121492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 18430729 - 18430675
Alignment:
Q  331 gcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||| |||||||||  ||| ||||| ||||||||||||||||||    
T  18430729 gcttcaagcttccttcttgttgattatattgctctcatttgttcttccagaacct 18430675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 19540701 - 19540762
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| |||| |||||| ||||||||||||||| |  |||||||||||||||||| |||||    
T  19540701 ttcagacgctttaagctttctttttgttgattccttagctctcttttgttcttccaaaacct 19540762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 44840639 - 44840699
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||||||||||| ||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  44840639 tgcttctgatgatcttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 44840699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 6392854 - 6392913
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||| ||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  6392854 gcttctgataaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 6392913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 22776196 - 22776137
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||| ||||||| ||||  |||||| ||| ||||||||||||||    
T  22776196 gcttctgatgaacttgcttctaatgacgtcatcacttcaggagcac-tttgtcttcaggag 22776137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 22781574 - 22781515
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||| ||||||| ||||  |||||| ||| ||||||||||||||    
T  22781574 gcttctgatgaacttgcttctaatgacgtcatcacttcaggagcac-tttgtcttcaggag 22781515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 28550809 - 28550750
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||| ||||||||| ||||  |||||| ||| ||||||||||||||    
T  28550809 gcttctgatgaacttgcttatgatgacgtcatcacttcaggagcac-tttgtcttcaggag 28550750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 40332297 - 40332356
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||| ||||||||| ||||  |||||| ||| ||||||||||||||    
T  40332297 gcttctgatgaacttgcttatgatgacgtcatcacttcaggagcac-tttgtcttcaggag 40332356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 315
Target Start/End: Complemental strand, 22785599 - 22785472
Alignment:
Q  186 tttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagat-gcttctgatgaacttgcttctgatgacgtt 284  Q
    |||||||||||||||  | ||||||||||||||||  | |||||||| ||   |||||||| ||||  | |||| ||||||||||||||||||||| ||     
T  22785599 tttgaagctttaagt--tgcatctcctgatgaactgtagcttctggtgattcacagcttctgatgaacttgcttttgatgaacttgcttctgatgatgtc 22785502  T
Q  285 atcagctcaggatcacttttgtcttcaggag 315  Q
    ||||  ||| || ||| ||||||||||||||    
T  22785501 atcacttcaagagcac-tttgtcttcaggag 22785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 22785749 - 22785670
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgcctt 105  Q
    |||||||||||||||||||| ||||||| ||||||  ||||| ||| || |||  || ||||| ||||||||||||||||    
T  22785749 gagtagtggagatagtggttatacactttgtacaaaagtactatgtcaacgctctttgaagaataagcatccaatgcctt 22785670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 30557165 - 30557111
Alignment:
Q  260 tgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||||||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  30557165 tgatgaacttgcttctgatgacgtcatcaattcaggagcac-tttgtcttcaggag 30557111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 19498048 - 19498010
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacactt 54  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  19498048 agacacaaacagagtagtggaggtagtggttgtacactt 19498010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 24440551 - 24440501
Alignment:
Q  335 caagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||||  |||||||| ||||| |||||||||| |||||||    
T  24440551 caagcttcctttttgtaaattccattgctctcgtttgttcttctagaacct 24440501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 315
Target Start/End: Original strand, 38631184 - 38631230
Alignment:
Q  269 tgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||| ||||  |||||| ||||||||||||||||||    
T  38631184 tgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggag 38631230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 18703075 - 18703116
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactct 365  Q
    |||||| ||||||||||||||| |||||||||||||| ||||    
T  18703075 ttcagacgcttcaagcttccttcttgttgattccattgctct 18703116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 31800769 - 31800709
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||||||||| ||||||||||||||||||  ||||  |||||| ||| ||||||||||||||    
T  31800769 tgcttctgataaacttgcttctgatgacgccatcacttcaggagcac-tttgtcttcaggag 31800709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 22802777 - 22802833
Alignment:
Q  324 ttcagatgcttcaagcttcc-tttttgttgattccattactctcttttgttcttcca 379  Q
    |||||| |||| |||||||| |||||||||||| ||||||||| | |||||||||||    
T  22802777 ttcagacgctttaagcttccctttttgttgatttcattactctttattgttcttcca 22802833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 24814677 - 24814645
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtac 59  Q
    ||||||||||| |||||||||||||||||||||    
T  24814677 gagtagtggaggtagtggttgtacacttcgtac 24814645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 22600267 - 22599892
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  22600267 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 22600168  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||    
T  22600167 tcctttcaaaatagtcgttgttttactcttccagtcttctgcaatgcttagacaagattaaatccattgaacagcctttgaagctttaagtcttgcatct 22600068  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||| | |||||||| ||||| ||||||| |||||||||||||||| |||||||||||||||| || ||||  |||||| ||||||||||||    
T  22600067 cctgatgaactagagcttctggtgatctttagcttctgatgagatgcttctgataaacttgcttctgatgatgtcatcacttcaggagcacttttgtctt 22599968  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||  || || |||||||||||||||||||||||||||||||||  || |||||||||||||||||| |||||    
T  22599967 caggagcgcttctcttcagatgcttcaagcttcctttttgttgattcatttgctctcttttgttcttccaaaacct 22599892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 377
Target Start/End: Complemental strand, 33256436 - 33256071
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||| ||||||||||||||||||||||||    
T  33256436 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgccttcaaa 33256337  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  33256336 tccttttaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 33256237  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||| ||||||  | |||||||| |||||  |||||| ||||||||||||||||||||||||||||||| | || ||||  |||||| ||||||||||||    
T  33256236 cctgttgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttctgataatgtcatcacttcaggagcacttttgtctt 33256139  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    || ||| ||| || |||| | || | ||||||| |||||||||||||| || ||||||| ||||||||    
T  33256138 caagagcacttctcttcaaacgccttaagcttcatttttgttgattcctttgctctcttctgttcttc 33256071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 377
Target Start/End: Complemental strand, 33276608 - 33276243
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  ||||| ||||||||||||||||||||||||    
T  33276608 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgccttcaaa 33276509  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  33276508 tccttttaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 33276409  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||| ||||||  | |||||||| |||||  |||||| ||||||||||||||||||||||||||||||| | || ||||  |||||| ||||||||||||    
T  33276408 cctggtgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttctgataatgtcatcacttcaggagcacttttgtctt 33276311  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    || ||| ||| || |||| | || | ||||||| |||||||||||||| || ||||||| ||||||||    
T  33276310 caagagcacttctcttcaaacgccttaagcttcatttttgttgattcctttgctctcttctgttcttc 33276243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 11 - 377
Target Start/End: Complemental strand, 20954558 - 20954173
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| ||||| ||| |||| |||||||| ||||||    
T  20954558 agcagagaaacaaactgagtagtggagatagtggttgtacacttggtacaattgtactttgtcaacgctcttcaaagaataagcctccaatgctttcaaa 20954459  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||| | | ||| ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  20954458 tcctttcaaaatggccattgcttcactcttcctgtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 20954359  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||| | |||||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||| ||||  |||||| ||||||||||||    
T  20954358 cctgatgaactagagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgaatctgatgacgtcatcacttcaggagcacttttgtctt 20954259  T
Q  310 ca------------------ggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    ||                  |||| ||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  20954258 caggagcacttctgttttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttc 20954173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 22153852 - 22154243
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||| |||||| |||||||||| ||||||    
T  22153852 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaatcatccaatgctttcaaa 22153951  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| |||| |||| |||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  22153952 tcctttcaaattagttgttgcttcactattctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatct 22154051  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt------ 303  Q
    ||||||||||| || |||||||| ||||||  ||||||||||||||||||| | |||||||||||| ||||||| ||||  | |||| ||||||          
T  22154052 cctgatgaacttcagcttctggtgatcttctacttcttatgagatgcttctaaggaacttgcttctaatgacgtcatcactttaggaacacttttacttc 22154151  T
Q  304 ----------tgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
              || ||||||||| ||| || |||||| |||||||||||| |||||||||||||  || ||||||||||||||||||||||||    
T  22154152 aggagcactgtgacttcaggagcacttctcttcagacgcttcaagcttcatttttgttgattcatttgctctcttttgttcttccagaacct 22154243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 2268526 - 2268897
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||| || ||| ||  | |||||||||| |||||||||||||    
T  2268526 agcagagacaaaaacagagtagtcgaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgacgaacaagcattcaatgccttcaaa 2268625  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |||||||||||||||   || || |||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||| | |||||    
T  2268626 tcatttcaaaatagt---tgcttaactcttccagtcttctacaatgattagacgagattaaatccattgaacaacctttgaagccttaagtcttgcatct 2268722  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||| |||||||  | ||||| || || |   |||||| |||||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||||||    
T  2268723 cctaatgaactttagcttctagtgat-tgttgcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttttgtctt 2268821  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||  || || |||||||||| ||| ||||||||||| ||||||  || ||||||||||||||||||||||||    
T  2268822 caggagcgcttctcttcagatgctacaaacttcctttttgatgattcatttgctctcttttgttcttccagaacct 2268897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 28 - 351
Target Start/End: Complemental strand, 23036595 - 23036273
Alignment:
Q  28 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcg 126  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||||| | ||| ||  |||||||||||||||||| ||||||||| |||||||||||| |    
T  23036595 agtagaggaggtagtggttgtacacttcgtacaattgttctttgttgacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaaaatagttg 23036496  T
Q  127 ttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaact 226  Q
    |||||||||| ||| ||||||||||| |  |||||||||||||||||||||||| |||||||||||||||||||| | ||||| |||||||   ||| ||    
T  23036495 ttgtttcacttttttagtcttctgcattatttagacgagattaaatccattgaatagcctttgaagctttaagtcttgcatcttctgatga--gacagct 23036398  T
Q  227 tctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattc 326  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| || ||||  |||||| ||||| ||||||||||||  || ||||||    
T  23036397 tctggtgatcttcagcttctgatgagatgcttctgatgaaattgcttctgatgatgtcatcacttcaggagcacttgtgtcttcaggagcgcttctattc 23036298  T
Q  327 agatgcttcaagcttcctttttgtt 351  Q
    |||||||||||||||||||||||||    
T  23036297 agatgcttcaagcttcctttttgtt 23036273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 28 - 351
Target Start/End: Original strand, 35401821 - 35402143
Alignment:
Q  28 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcg 126  Q
    |||||||||| |||||||||||||||| ||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||| ||||||||||||||    
T  35401821 agtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 35401920  T
Q  127 ttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaact 226  Q
    ||| |||||| || |||||||||| | || ||| ||||||||||||||||||||||| ||||||||||||||||| | ||||| |||||||   ||| ||    
T  35401921 ttgcttcacttttccagtcttctgtattgtttaaacgagattaaatccattgaacagtctttgaagctttaagtcttgcatcttctgatga--gacagct 35402018  T
Q  227 tctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattc 326  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||  |||||| ||||| ||||||||||||  || || |||    
T  35402019 tctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgaggtcatcacttcaggagcacttgtgtcttcaggagcgcttctcttc 35402118  T
Q  327 agatgcttcaagcttcctttttgtt 351  Q
    | |||||||||||||||||||||||    
T  35402119 atatgcttcaagcttcctttttgtt 35402143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 28492489 - 28492248
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  28492489 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaagcatccaatgccttcaaa 28492390  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||||||  ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | |||||    
T  28492389 tcctttcaaaatagttgttgcttcactcttctagtcttctgcaatgcttagacgatattaaatccattgaacaacctttgaagctttaagtcttgcatct 28492290  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    |||||||||||||||||||||   ||||||||||||| ||||    
T  28492289 cctgatgaactacaacttctgaagatcttcagcttctgatga 28492248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 48704199 - 48704569
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||||||||| || | | ||||| ||||||||||||| ||||||||||    
T  48704199 agcagagacataaattgagtagtggagacattggttgtacacttcgtacaattgtactttgtcaacgttcttcaaagaacaagcatccagtgccttcaaa 48704298  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||| | |||||    
T  48704299 tcctttcaaaatagttgttgtttcactcttccagtcttctgcattgcttaaacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 48704398  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcac-ttttgtct 308  Q
     ||||||||||  | |||||||| ||||  ||||||| ||||||||||||||||||||| |||||||||||| ||    | |   ||| || |  |  ||    
T  48704399 tctgatgaactttagcttctggtgatct--agcttctgatgagatgcttctgatgaactagcttctgatgacctt----gtttctgatgacgtcatcact 48704492  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||| ||| || || |||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||    
T  48704493 tcaggagcacttctctttagatgcttcaagcttcatttttgttgatttcattgctctcttttgttcttccagaacct 48704569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 19717519 - 19717874
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||| | |||||| |||| ||||||||||||||||||||||||||||| || ||| ||||| |||||||||||| |||||||||||    
T  19717519 agcagagacacaaactgatttgtggagttagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccgatgccttcaaa 19717618  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  19717619 tcctttcaaaatagtcgttgcttcactcttccagtcctctgcaatgcttcgacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 19717718  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||  |||||||  | |||||||| |||||  |||||| |||||||||||||||||||||||||| ||||||||| ||||                  |||    
T  19717719 ccatatgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttatgatgacgtcatca------------------ctt 19717798  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || |||||| |||| ||||||||||||| |||||||| || | ||||||||||||||||||||||    
T  19717799 caggagcacttctcttcagacgctttaagcttcctttttattgattcctttgccctcttttgttcttccagaacct 19717874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 16235381 - 16235022
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttca-agaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||  ||||||||||| |||| ||||||||||||||||||||||||||||| ||  || ||   ||||||||||| |||||||||||||    
T  16235381 agcagagacaaaaaaggagtagtggaggtagttgttgtacacttcgtacaattgtactttgtcaacactctttggagaacaagcattcaatgccttcaaa 16235282  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| || |||||||||||| || ||||||||||||||||| |||||||| ||||||||| ||||| || | |||||    
T  16235281 tcctttcaaaatagtcgttgcttcacttttccagtcttctgcattgtttagacgagattaaatcaattgaacaacctttgaagttttaaatcttgcatct 16235182  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
      ||||||   |||||||||||| |||||||||||||              ||||||||| ||||||||||||| ||||  |||||| ||||| ||||||    
T  16235181 tatgatgag--acaacttctggtgatcttcagcttct--------------gatgaacttacttctgatgacgtcatcacttcaggagcacttgtgtctt 16235098  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16235097 caggagcacttcttttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 16235022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 11 - 314
Target Start/End: Original strand, 38282562 - 38282864
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| || ||| ||  |||||||||||| ||||||||| |||    
T  38282562 agcagagacaaaaacagagtagtggagatagtggttgta-acttcgtacaattgtactttgtcaacgctctttgaagaacaagcattcaatgcctttaaa 38282660  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||  ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  38282661 tcctttcaaaatacccgttgcttcactcttccagtcttctgcgatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 38282760  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||| | ||| |||| ||||| ||| ||| |||||||||||||||| |||||||||||||||| || || |  |||||| ||| ||||||||    
T  38282761 cctgatgaactagagcttttggtgatctttagcatctgatgagatgcttctgataaacttgcttctgatgaggtcattacttcaggagcac-tttgtctt 38282859  T
Q  310 cagga 314  Q
    |||||    
T  38282860 cagga 38282864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 15 - 385
Target Start/End: Complemental strand, 32786018 - 32785663
Alignment:
Q  15 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcat 113  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||| |    
T  32786018 gagacaaaaacatagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttttaagaacaagcatccaatgccttcaaatcct 32785919  T
Q  114 ttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctg 213  Q
    |||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| | |||||| ||    
T  32785918 ttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatcca-tgaacaacctttgaagctttaagtcttgcatctcatg 32785820  T
Q  214 atgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcagg 313  Q
    |||||||||||||||| || || ||||              |||||| |||||||||||||| ||||||||| ||  |||||  ||| |||| |||||||    
T  32785819 atgaactacaacttctagtgattttca--------------gcttctaatgaacttgcttctaatgacgttaccacttcaggggcac-tttgccttcagg 32785735  T
Q  314 agaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    || | |  | |||||| |||| |||||||||||||||||||||  || || ||| |||||||||||||||||    
T  32785734 agcagttttcttcagacgctttaagcttcctttttgttgattcatttgctttctattgttcttccagaacct 32785663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 11 - 217
Target Start/End: Complemental strand, 22201821 - 22201614
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttca-agaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| |||||||||||||||||||||||||    
T  22201821 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcatagaacaagcatccaatgccttcaaa 22201722  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| || ||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||  |||||||||| | |||||    
T  22201721 tcctttcaaaatagttgttgctttactttttcagtcttctgcaatgcttagacgagattaaatgcattgagcagcctttgtcgctttaagtcttgcatct 22201622  T
Q  210 cctgatga 217  Q
    ||||||||    
T  22201621 cctgatga 22201614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 22427442 - 22427078
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  22427442 agcagagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgcttttttaagaacaagcatccaatgccttcaaa 22427343  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||  | |||||    
T  22427342 tcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatctattgaacagtctttgaagctttatgt--tgcatct 22427245  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    |||||||||||  | |||||||| || |||||||||| ||| |  |||||||| |  |||||||||||||||| | | ||  |||||| ||| || ||||    
T  22427244 cctgatgaactggagcttctggtgattttcagcttctgatgaacttgcttctggtagacttgcttctgatgacatcaccacttcaggagcac-ttggtct 22427146  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttctt 376  Q
    || |||| | |  | ||||||  ||| |||||| ||||||||||||||| || |||||| ||||||||    
T  22427145 tcgggagcagttttcttcagacactttaagctttctttttgttgattcctttgctctctattgttctt 22427078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 1900340 - 1900581
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||| ||||| |||||||||| || ||| ||  |||||||||||| ||||||||| |||    
T  1900340 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcttacaactgtactttgtcaacgctctttgaagaacaagcattcaatgcctttaaa 1900439  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| | |||||    
T  1900440 tcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaataacctttgaagctttaagtcttgcatct 1900539  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    |||||||||||| | |||||||  ||||| ||||||| ||||    
T  1900540 cctgatgaactagatcttctggcgatctttagcttctgatga 1900581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 12284418 - 12284780
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||||||| ||||||    
T  12284418 agcagagacacaaactgattagtggagatagtgtttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaa 12284517  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||| |   ||||| |||||||||| ||||||||| ||||||||||||| ||||||||||| |||||| | |||||    
T  12284518 tcctttcaaaatagtcgttgcttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaacaacctttgaagctctaagtcttgcatct 12284617  T
Q  210 cctgatgaactacaacttctggttat---------------cttcagcttcttatga-gatgcttctgatgaacttgcttctgatgacgttatcagctca 293  Q
     |||||||||| || |||||||| ||               |||||||||||  |||   |||||||||||||||||||||||||||||| ||||  |||    
T  12284618 tctgatgaacttcagcttctggtgatcttgcttctgatgaacttcagcttctggtgatcttgcttctgatgaacttgcttctgatgacgtcatcacttca 12284717  T
Q  294 ggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattcc 357  Q
    | | ||| |||| ||||||||| ||| || |||||||| |||||||||||||||||||||||||    
T  12284718 gaagcac-tttgacttcaggagcacttctcttcagatgtttcaagcttcctttttgttgattcc 12284780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 265
Target Start/End: Original strand, 1577862 - 1578115
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||| || || ||||||||||||||||| ||||||    
T  1577862 agcagagacacaaactgagtagtggagatagtggttgtacacttagtacaattatactttgtcaacgctcttaaaagaacaagcatccaatgctttcaaa 1577961  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |  ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| | |||||    
T  1577962 ttctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatctattgaacaacctttgaagctctaagtcttgcatct 1578061  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatga 265  Q
    |||||| ||||  | ||||| || |||||  |||||| | |||||| |||||||||    
T  1578062 cctgataaactttagcttcttgtgatctt--gcttctgacgagatgtttctgatga 1578115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 36134185 - 36134543
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  ||||||||||||||||||| ||||||    
T  36134185 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgc-ttcaaa 36134283  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| | |||| || |||||||||||| || ||||| |||||||||||||||||||| |||||||| ||||||||| |  ||||    
T  36134284 tcctttcaaaatagttgttgctccacttttccagtcttctgcattgtttagatgagattaaatccattgaacaacctttgaaactttaagtcttgtatct 36134383  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
     |||||||   ||| |||||||| |||||||              ||||||| || |  ||||||||||||| | ||    |||||| ||||||||||||    
T  36134384 tctgatga--gacagcttctggtgatcttca--------------gcttctggtggagatgcttctgatgacatcattgcttcaggagcacttttgtctt 36134467  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||  || || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  36134468 caggagcgcttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 36134543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 22464894 - 22464621
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||  ||||||||||| |||||| ||||||||||||||| ||||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  22464894 agcagagacaaaaatagagtagtggaggtagtggatgtacacttcgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 22464795  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatc 208  Q
    |||||||||| ||||||||| |||||| || ||||||||||||||||||||| |||||||||||| ||||||| || |||||||||||| ||  ||||||    
T  22464794 tcatttcaaattagtcgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccgttgaacaaccttttgaagctttatgt--tacatc 22464697  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgt 283  Q
    ||||||||||||  | | |||||| || |||||||||||||| |  |||||||| || ||||||||||||||||||    
T  22464696 tcctgatgaactgtagcatctggtgattttcagcttcttatgaacttgcttctggtggacttgcttctgatgacgt 22464621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 10757416 - 10757627
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||| |||||||| |||||||||| ||||||    
T  10757416 agcagagacacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaatcatccaatgctttcaaa 10757515  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatc 208  Q
    || |||||||||||| |||| |||||||||    | ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | ||||    
T  10757516 tcctttcaaaatagttgttgcttcactcttctgattttctgcaatgcttagacgagattaaatccattgaacaaccttttgaagctttaagtcttgcatc 10757615  T
Q  209 tcctgatgaact 220  Q
    ||||||||||||    
T  10757616 tcctgatgaact 10757627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 29215792 - 29216031
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||||  ||| ||  ||||||||||||||||||||||||||    
T  29215792 agcagagacaaaaacagagtagtggagctagtgattgtacacttcgtacaattgtactttgttatcgctctttgaagaacaagcatccaatgccttcaaa 29215891  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||| ||||| |||||| ||  |||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||  | |||||    
T  29215892 tcctttcaaactagccgttgcttcacttttctagtcttttgcaatgcttagacgagattaaatccattaaacaacctttgaagctttaagt--tgcatct 29215989  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||||||| | ||||||||||| || |||||||||| ||||    
T  29215990 cctgatgaattgcaacttctggtgattttcagcttctgatga 29216031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 39201077 - 39200845
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||| ||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  |||||||||||||||||| |||||||    
T  39201077 agcagaaacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgtcttcaaa 39200978  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||| ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||| ||  | |||||    
T  39200977 tcctttcaaactagccgttgcttcactctttcagtcttctgcaatgcttacatgagattaaatccattgaacagcttttgaagctttatgt--tgcatct 39200880  T
Q  210 cctgatgaactacaacttctggttatcttcagctt 244  Q
    ||| ||||||| || ||| |||| || ||||||||    
T  39200879 cctaatgaactgcagcttttggtgattttcagctt 39200845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 27 - 265
Target Start/End: Original strand, 7309830 - 7310068
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaacaagcatccaatgccttcaaatcatttcaaaatagtcg 126  Q
    ||||| ||||| ||||||||||||||||||||||||||||||  ||||| ||| || |||||| |||||||||||||||||||||  | ||||||   ||    
T  7309830 gagtattggaggtagtggttgtacacttcgtacaattgtactacgttaacgcttttgaagaacgagcatccaatgccttcaaatccctacaaaatgaccg 7309929  T
Q  127 ttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaact 226  Q
    ||| |||||||||  ||||||||||||| ||||||||| | | ||||||||||||||| |||||||||||||||| | ||||||||||||| ||  | ||    
T  7309930 ttgcttcactcttatagtcttctgcaatccttagacgacactgaatccattgaacagcttttgaagctttaagtcttgcatctcctgatgagctttagct 7310029  T
Q  227 tctggttatcttcagcttcttatgagatgcttctgatga 265  Q
    | |||| ||||||||||||| |||||||| |||||||||    
T  7310030 tatggtgatcttcagcttctgatgagatgtttctgatga 7310068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 14 - 385
Target Start/End: Complemental strand, 21191947 - 21191591
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||  || ||| ||| ||||||||||||||||||||||||||||     
T  21191947 agagacacaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaacgctcttcaaagaacaagcatccaatgccttcaaatcc 21191848  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    |||  || |||  |||| |||||||||   ||||||||||||| || |  | |||||||| | ||||||| |||||||||||||||       || ||      
T  21191847 ttttgaattagctgttgcttcactcttctggtcttctgcaatg-ttgggtgtgattaaatactttgaacaacctttgaagctttaa-------atgtc-- 21191758  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcag 312  Q
      |||||| || ||||| || || ||  | |||| |||||||||||| ||||||||||||||||||||||| ||||  ||||||  ||  ||| ||||||    
T  21191757 --tgaacttcagcttcttgtgatatt--gtttctgatgagatgcttcagatgaacttgcttctgatgacgtcatcacttcaggaggac--ttgacttcag 21191664  T
Q  313 gagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| |||  | |||||||||||||||||||||| |||||||||||| | ||||| ||||||||||||||||||    
T  21191663 gagcacttttcttcagatgcttcaagcttccttcttgttgattccaatgctctcgtttgttcttccagaacct 21191591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 11 - 265
Target Start/End: Original strand, 2834684 - 2834938
Alignment:
Q  11 agcagagacaca-aactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaa 108  Q
    |||||||||| | ||| |||||||||||  |||||||||||| |||||||||| ||||||||| || | | ||  |||||||||||||||||||||||||    
T  2834684 agcagagacaaagaacagagtagtggaggcagtggttgtacaattcgtacaatcgtactttgtcaacgttctttgaagaacaagcatccaatgccttcaa 2834783  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    ||| ||||||| ||| ||||| |||||| |||||||||||  |||||||||||||||||| ||||||||||||| | || ||||||||||||  | ||||    
T  2834784 atcctttcaaattagccgttgcttcactttttcagtcttcaacaatgcttagacgagattgaatccattgaacaactttggaagctttaagt--tgcatc 2834881  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatga 265  Q
    ||| |||||||| || |||||||| || |||||||||| ||||  ||||||||||||    
T  2834882 tcccgatgaactgcagcttctggtgattttcagcttctaatgacttgcttctgatga 2834938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 11 - 315
Target Start/End: Complemental strand, 48570316 - 48570014
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||||||||||||||||  ||    
T  48570316 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttttaa 48570217  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || ||||||||||||||||  ||| ||  ||||||||||||| |||||||||| || ||||| || |||||| |||||| ||||||||  | |||||    
T  48570216 tccttccaaaatagtcgttgttatacttttctagtcttctgcaat-cttagacgagtttgaatccgttaaacagcttttgaaactttaagt--tgcatct 48570120  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgaga-tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    ||||||||| |||| |||||||| ||  ||||||||| || | | ||||| ||||||||||| |||||||||||| ||||  |||||| ||| |||||||    
T  48570119 cctgatgaattacagcttctggtgattctcagcttctgataaaattgcttatgatgaacttgtttctgatgacgtcatcatttcaggagcac-tttgtct 48570021  T
Q  309 tcaggag 315  Q
    |||||||    
T  48570020 tcaggag 48570014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 2267087 - 2267292
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| ||||  |||||||||| ||||||||||||||||| |||||||| ||||||  || ||| ||  |||||||| ||||||||||||||||||      
T  2267087 agagacaaaaacatagtagtggaggtagtggttgtacacttcatacaattgcactttgacaacgctctttgaagaacaaacatccaatgccttcaaattc 2267186  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||| |||| |||| |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  | ||||||||    
T  2267187 tttcaaactagttgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttatgt--tgcatctcct 2267284  T
Q  213 gatgaact 220  Q
    ||||||||    
T  2267285 gatgaact 2267292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 25448651 - 25448443
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||  ||||| ||||||||||||||||||||    
T  25448651 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaa 25448552  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||||| || |||||| || ||||||||||||||  ||||||||| || ||||| || |||||| |||||||||||||||  | |||||    
T  25448551 tcctttcaaaatagtcgctgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcatct 25448454  T
Q  210 cctgatgaact 220  Q
     ||||||||||    
T  25448453 tctgatgaact 25448443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 21028788 - 21029029
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaa- 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |  ||| ||||| || ||||||||||||||||||||     
T  21028788 agcagagacacaaactgagtagtggagatagtggctgtacacttcatacaattgtactttgtcagcgctcttcaaaaagcaagcatccaatgccttcaac 21028887  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
     ||||||  || ||||||||| |||||||||   |||||||||||||||| || |||||||||| ||||||||| | | ||||||||||||||   |||     
T  21028888 ttcattt-gaattagtcgttgcttcactcttatggtcttctgcaatgcttggatgagattaaattcattgaacaacatatgaagctttaagtctctcata 21028986  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    | || ||||  | || |||||||| ||||||||||||| ||||    
T  21028987 ttctaatgatattcagcttctggtgatcttcagcttctgatga 21029029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 30893090 - 30893298
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |  ||| ||| ||||||||||||| | ||| ||||||||     
T  30893090 agagacacaaacttagtagtggagatagtggttgtacacttcgtacaattgtactatgtcagcgctattcaaagaacaagcatctagtgctttcaaatcc 30893189  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatctcc 211  Q
    ||||||||||| | ||| ||||||| |    |||| |||||||||| ||||||||| |||||| |||||| || |||||| ||||||||| | |||||||    
T  30893190 tttcaaaatagcctttgcttcactcctctgatcttttgcaatgcttggacgagattgaatccaatgaacaaccttttgaaactttaagtcttgcatctcc 30893289  T
Q  212 tgatgaact 220  Q
    |||||||||    
T  30893290 tgatgaact 30893298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 11 - 315
Target Start/End: Original strand, 21702809 - 21703111
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| |||||| ||||||| |  ||    
T  21702809 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcattcaatgcccttcaa 21702908  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||| ||||| |  ||| ||  ||||||||||||| |||||||||| || ||||| |  ||||   |||||||||||||||  | |||||    
T  21702909 tcctttcaaaatagccgttgctatacttttcaagtcttctgcaat-cttagacgagtttgaatccttgaaacaaattttgaagctttaagt--tgcatct 21703005  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    ||||||||||| || |||||||| ||   |||||||| ||| |  ||||||||||||||||||||||||||| || ||||  |||||| ||| |||||||    
T  21703006 cctgatgaactgcagcttctggtgattcacagcttctgatgtacttgcttctgatgaacttgcttctgatgatgtcatcacttcaggagcac-tttgtct 21703104  T
Q  309 tcaggag 315  Q
    |||||||    
T  21703105 tcaggag 21703111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 280
Target Start/End: Complemental strand, 2327525 - 2327255
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaa 108  Q
    |||||||||| || | ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||   | ||||||||||||||||| ||| |    
T  2327525 agcagagacaaaaccagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctcttttgaggaacaagcatccaatgcgttcga 2327426  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    ||| ||||||||||||  ||| |||||| |||||||| ||||||||  ||||||||| || |||| ||| |||| | |||||||||||||||  | ||||    
T  2327425 atcctttcaaaatagtttttgcttcactttttcagtcatctgcaatctttagacgagtttgaatctattaaacaacttttgaagctttaagt--tgcatc 2327328  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatga 280  Q
    |||||||||||| || |||||||| || ||  |||||| ||  |  ||||||||||||||| |||| ||||||    
T  2327327 tcctgatgaactgcagcttctggtgatttttggcttctgataaacttgcttctgatgaactcgcttttgatga 2327255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 26702214 - 26701973
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaa- 108  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||| |   || ||||| || |||| |||||||||||||||     
T  26702214 agcagagacacatactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcatcactcttcaaaaagcaagaatccaatgccttcaac 26702115  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
     ||||||  || || | |||| ||||||||    ||||||||||||||| | |||||||| |||||||  |||||||||||||||||||||||   ||||    
T  26702114 ttcattt-gaattaattgttgcttcactctcctggtcttctgcaatgctcaaacgagattgaatccatataacagcctttgaagctttaagtctcccatc 26702016  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    | ||||||||||  | |||||||| |||||||| |||| ||||    
T  26702015 ttctgatgaactttagcttctggtgatcttcagtttctgatga 26701973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 35040161 - 35040351
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||  |||| |||||||||||||| ||||||    
T  35040161 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagatcaagcatccaatgctttcaaa 35040260  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagt 200  Q
    || ||||||||||||||||| || ||| ||  |||||||||||||  ||||||||| ||  ||||||| |||| | |||||||| ||||||    
T  35040261 tcctttcaaaatagtcgttgctttacttttctagtcttctgcaatctttagacgaggttggatccattaaacaacttttgaagccttaagt 35040351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 44821630 - 44821396
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||| ||||||||||||||||||  ||||| ||| ||  || ||  ||||| |||||| ||| |||||||||    
T  44821630 agcagagacaaaaacagagtagtggagatagtagttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatacaaagccttcaaa 44821531  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || |||||||||||||| |  ||| |||||||||||| |||  |||||||||| || ||||| || |||| | |||||||||||||||  | |||||    
T  44821530 tccttccaaaatagtcgttgctatactttttcagtcttctacaaaccttagacgagtttgaatcctttaaacaacttttgaagctttaagt--tgcatct 44821433  T
Q  210 cctgatgaactacaacttctggttatcttcagcttct 246  Q
    |||||||||||||| ||| |||| ||  |||||||||    
T  44821432 cctgatgaactacagcttatggtgattctcagcttct 44821396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 12613899 - 12613713
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||  || ||| ||| ||||||||||| ||||||| ||||||    
T  12613899 agcagagacacaaacagagtagtgaaggtagtggttgtacacttcgtacaattgtactttgccaacgctcttcaaagaacaagcaaccaatgctttcaaa 12613800  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaa 198  Q
    || |||  || ||| ||||| |||||||||   |||||||||||||| ||| || |||||||||  ||||||| |||||||||||||||    
T  12613799 tc-ttttgaattagccgttgcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcttttgaacaacctttgaagctttaa 12613713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 30572192 - 30572411
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||| ||| |||| |||||||||||||||||||||||||||||||||||| ||||| ||| || ||| ||| ||||| || |||||||||| ||  ||    
T  30572192 agcagaaacaaaaacagagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctcttctaagaataaacatccaatgcttttcaa 30572291  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||| ||||| |  ||| || |||||||||||||| || ||||||| || ||||| |  ||||||  ||||||||||||||  |  ||||    
T  30572292 tcctttcaaaatagccgttgctatacttttccagtcttctgcaat-ctcagacgagtttgaatccttgaaacagctattgaagctttaagt--tgtatct 30572388  T
Q  210 cctgatgaactacaacttctggt 232  Q
    ||||||||||| |||||||||||    
T  30572389 cctgatgaactgcaacttctggt 30572411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 31 - 385
Target Start/End: Complemental strand, 17025029 - 17024693
Alignment:
Q  31 agtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttg 129  Q
    ||||||| |||||||||||||||||||||||||||  ||| | || |||  || |||||||||||||||||||||||||||| |||  || |||||||||    
T  17025029 agtggaggtagtggttgtacacttcgtacaattgtcatttttcaacgctctttaaagaacaagcatccaatgccttcaaatccttttgaattagtcgttg 17024930  T
Q  130 tttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttct 229  Q
     |||||||||   ||||| ||||||| |||  || |||||||||| |||||||| | |||||||||||| ||     |||            || |||||    
T  17024929 cttcactcttatggtcttttgcaatg-ttatgcgtgattaaatcctttgaacagacattgaagctttaattc-----tct------------cagcttct 17024848  T
Q  230 ggttatcttcagcttcttatga-gatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcag 328  Q
    | | |||||||||||||  ||| | |||||||||||||||||||||||||||||||||||  |||| | |||  ||  ||| || |   ||  | |||||    
T  17024847 gatgatcttcagcttctggtgatgttgcttctgatgaacttgcttctgatgacgttatcacttcagaagcac--ttaactttagaacctcttttcttcag 17024750  T
Q  329 atgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||||| ||||||||||||||  |||| ||||||||||||||||||    
T  17024749 atgcttcaagcttccttcttgttgattccattgatctcatttgttcttccagaacct 17024693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 302
Target Start/End: Original strand, 46088984 - 46089266
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||||||||||||||          
T  46088984 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcc------ 46089077  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
       |||||||||||||||||    ||| || ||||||||||||||  |||| |||| || ||||| |  |||||| |||||||||||||||  | |||||    
T  46089078 ---tttcaaaatagtcgttgccatacttttccagtcttctgcaatttttaggcgagtttgaatccttgaaacagcttttgaagctttaagt--tgcatct 46089172  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactt 302  Q
    | ||||||||| || |||||||| ||   || ||| | ||| |  |||||||||||||||||||||||||||||| ||||  |||||| |||||    
T  46089173 catgatgaactgcagcttctggtgatacacaacttatgatgaacttgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 46089266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 14263525 - 14263362
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaag-aacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| ||||||||||| |||||||||||||||||||||||  || |||||  || ||| ||  || |||||| |||||||||||||||||| ||||||||    
T  14263525 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtgctttgccaacgctctttgaggaacaagtatccaatgccttcaaatcctttcaaaa 14263426  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatcc-attgaacag 183  Q
    ||||||||||||  ||  | |||||||||||||| |||||||| |||| ||||| |||||||||    
T  14263425 tagtcgttgttttgcttctccagtcttctgcaatccttagacgggatttaatccaattgaacag 14263362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 315
Target Start/End: Original strand, 10250984 - 10251274
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||||||  ||||| ||| ||| ||  || ||||| |||||||||||||||||          
T  10250984 agagacaaaaacagagtagtggagataatggttgtacacttcgtacaaacgtactatgtcaaaactctttgaagaataagcatccaatgccttc------ 10251077  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
       |||| ||| |||||||  ||| || |||||||||||||| |||||||||| || ||||| || |||| | |||||||||||||||  | ||||||||    
T  10251078 ---caaattagccgttgttatacttttccagtcttctgcaat-cttagacgagtttgaatcctttaaacaacttttgaagctttaagt--tgcatctcct 10251171  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttca 311  Q
    |||||||| || |||||||| ||    ||||||| ||| |  |||||  ||||||||||||| ||||||||| ||||  ||| || || |||||||||||    
T  10251172 gatgaactgcagcttctggtgattcatagcttctgatgaacttgctttcgatgaacttgcttttgatgacgtcatcacttcatgagca-ttttgtcttca 10251270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 1578124 - 1578202
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||| ||| || ||||||||||| |||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  1578124 cttcaggagcacttctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgttctttcagaacct 1578202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 1900619 - 1900702
Alignment:
Q  302 tttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||| | | || |||||| | || |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  1900619 tttgtcttcaggagcagttctcttcagacgttttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 1900702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 359
Target Start/End: Complemental strand, 12613649 - 12613533
Alignment:
Q  241 gcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagct 340  Q
    |||||| ||||| || |||| |||||||||||||||||||||| ||||  |||||| |||||  | |||||| |  |||  | |||||||||||||||||    
T  12613649 gcttctgatgaggtggttctaatgaacttgcttctgatgacgtcatcacttcaggagcactt--gacttcagaatcactattcttcagatgcttcaagct 12613552  T
Q  341 tcctttttgttgattccat 359  Q
    |||||||||||||||||||    
T  12613551 tcctttttgttgattccat 12613533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 18896360 - 18896299
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  18896360 ttcagatgcttcatgcttccttcttgttgattccattgctctcatttgttcttccagaacct 18896299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 379
Target Start/End: Original strand, 2267296 - 2267419
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgat 354  Q
    ||||||||||||||||||||| ||||||| |  |  |||||| |||| | |||||||| || | |  | |||| |||||| |||||||||||||||||||    
T  2267296 gcttctgatgaacttgcttctaatgacgtcactacttcaggagcactat-gtcttcagaagcagttttcttcatatgctttaagcttcctttttgttgat 2267394  T
Q  355 tccattactctcttttgttcttcca 379  Q
    | | ||||||||| |||||||||||    
T  2267395 ttctttactctctattgttcttcca 2267419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 19215607 - 19215658
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaat 62  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||    
T  19215607 agcagagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaat 19215658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 23024783 - 23024833
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  23024783 agcagagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaa 23024833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 357
Target Start/End: Original strand, 30893314 - 30893403
Alignment:
Q  267 cttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattcc 357  Q
    ||||||||||||||||| ||||  ||||||  ||||| | ||||||||| ||| || ||||||||||||||| ||||| ||||||||||||    
T  30893314 cttgcttctgatgacgtcatcacttcaggagtacttt-gacttcaggagcacttctcttcagatgcttcaagtttcctctttgttgattcc 30893403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 385
Target Start/End: Original strand, 10757645 - 10757773
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttga 353  Q
    ||||||||||||||||||| |||||||||| ||||  | |||| ||||     ||||| ||| ||| || |||| | ||||||||||||||||| |||||    
T  10757645 tgcttctgatgaacttgctcctgatgacgtcatcactttaggagcactaaa--cttcaagagcacttctcttcaaacgcttcaagcttcctttt-gttga 10757741  T
Q  354 ttccattactctcttttgttcttccagaacct 385  Q
    |||| |  ||||||||||||||| ||||||||    
T  10757742 ttccttagctctcttttgttctttcagaacct 10757773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 379
Target Start/End: Complemental strand, 19170192 - 19170061
Alignment:
Q  254 tgcttctgatgaactt--gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgcta---ttcagatgcttcaag-cttc-cttt 346  Q
    ||||||||||||||||  |||||||||||||| ||||  ||||   |||||| ||||||||||| ||| | |   ||||||||||| ||| |||| ||||    
T  19170192 tgcttctgatgaacttttgcttctgatgacgtcatcacttcagaggcacttt-gtcttcaggagcacttcaaaacttcagatgctttaaggcttctcttt 19170094  T
Q  347 ttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||||| || ||||||||||||||||||    
T  19170093 ttgttgattcctttgctctcttttgttcttcca 19170061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 20109736 - 20109686
Alignment:
Q  335 caagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||| |||||||||  |||| ||||||||||||||||||    
T  20109736 caagcttcctttttgtagattccattgttctcatttgttcttccagaacct 20109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 352
Target Start/End: Original strand, 21029019 - 21029114
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttg 352  Q
    ||||||||||||||||||| ||||||||| ||||  |||||| |||  ||| ||| ||||| |||  | |||| |||||| |||||||||||||||||    
T  21029019 gcttctgatgaacttgcttttgatgacgtcatcacttcaggagcac--ttgacttgaggagcacttttcttcatatgctttaagcttcctttttgttg 21029114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 21135245 - 21135195
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  21135245 agcagagacaaaaacagagtagtggatttagtggttgtacacttcgtacaa 21135195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 385
Target Start/End: Complemental strand, 26701981 - 26701854
Alignment:
Q  257 ttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattc 356  Q
    |||||||||||||||||||||||| || ||||  ||| || |||  ||| ||||||||| |||  | |||| | ||||||||||||| || |||||||||    
T  26701981 ttctgatgaacttgcttctgatgatgtcatcacttcatgagcac--ttgacttcaggagcacttttcttcatacgcttcaagcttcccttatgttgattc 26701884  T
Q  357 cattactc-tcttttgttcttccagaacct 385  Q
    |||  ||| |  ||||||||||||||||||    
T  26701883 catagctcttaatttgttcttccagaacct 26701854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 28492220 - 28492146
Alignment:
Q  311 aggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||| ||| || |||||| |||| |||||||||||||||||||||  ||  |||||||| ||||||||||||||    
T  28492220 aggagcacttctcttcagacgctttaagcttcctttttgttgattcatttgttctcttttattcttccagaacct 28492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 343 - 385
Target Start/End: Original strand, 35402146 - 35402188
Alignment:
Q  343 ctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  35402146 ctttttgttgattccattgctctcttttgttcttccataacct 35402188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 385
Target Start/End: Original strand, 7310086 - 7310170
Alignment:
Q  298 cacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||| ||| || ||||||||||  ||||||||   | ||||||||  |  ||||||||||||||||||||||||    
T  7310086 cacttttgtcttcaggagcacttctcttcagatgctataagcttcc---tagttgattctttagctctcttttgttcttccagaacct 7310170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 21121149 - 21121057
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgc 102  Q
    |||||||||| |||| ||||||||||  |||||||||||||| ||||||||  ||||| ||| || |||  || ||||| |||||||||||||    
T  21121149 agcagagacaaaaacagagtagtggaagtagtggttgtacacgtcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 21121057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 17371042 - 17371085
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacacttcgtac 59  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||    
T  17371042 agacaaaaacagagtagtggaggtagtggttgtacacttcgtac 17371085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 37642243 - 37642290
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgta 58  Q
    |||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  37642243 agcagagacaaaaacagagtagtggaagtagtggttgtacacttcgta 37642290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 18896665 - 18896623
Alignment:
Q  28 agtagtggagatagtggttgtacacttcgtacaattgtacttt 70  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||    
T  18896665 agtagtggaggtagtggttgtacacttcgtacaactgtccttt 18896623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 24227749 - 24227707
Alignment:
Q  335 caagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||    
T  24227749 caagcttcctttttgtagattccattgctctcatttgttcttc 24227707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 7745159 - 7745066
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatcatttcaaa 119  Q
    ||||||||||| |||||||||||||||| ||| ||  ||||||||| || |||  || ||| | ||||||| ||||| |||||||| |||||||    
T  7745159 gagtagtggaggtagtggttgtacactttgtataaacgtactttgtcaacgctctttgaaggataagcatcaaatgcattcaaatcctttcaaa 7745066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 21984811 - 21984844
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatca 288  Q
    ||||||||||||||||||||||||||||| ||||    
T  21984811 gcttctgatgaacttgcttctgatgacgtcatca 21984844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 283
Target Start/End: Complemental strand, 34255370 - 34255341
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgt 283  Q
    ||||||||||||||||||||||||||||||    
T  34255370 tgcttctgatgaacttgcttctgatgacgt 34255341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 38282891 - 38282952
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| |||| ||||||||||||| |||||||  || |||| ||||||||||| |||||||    
T  38282891 ttcagacgctttaagcttcctttttattgattcatttgctctattttgttcttctagaacct 38282952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 42284642 - 42284715
Alignment:
Q  30 tagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgc 102  Q
    |||||||| |||||||||||||||||||||||  ||||| ||| || |||  || ||||| |||||||||||||    
T  42284642 tagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaaaaagcatccaatgc 42284715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 42284842 - 42284875
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatca 288  Q
    ||||||||||||||||||||||||||||| ||||    
T  42284842 gcttctgatgaacttgcttctgatgacgtcatca 42284875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 21135023 - 21134991
Alignment:
Q  256 cttctgatgaacttgcttctgatgacgttatca 288  Q
    |||||||||||||||||||||||||||| ||||    
T  21135023 cttctgatgaacttgcttctgatgacgtcatca 21134991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 21984607 - 21984683
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgc 102  Q
    ||||||||||  |||||||||||||||||||||||  ||||| ||| || |||  || ||||| |||||||||||||    
T  21984607 gagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 21984683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 22464595 - 22464508
Alignment:
Q  291 tcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||||| |||||| ||||||||||| | |  | |||| || ||| |||||||||||||||||||||| || |||| | |||||||||||    
T  22464595 tcaggaacacttt-gtcttcaggagcagttttcttcatatactttaagcttcctttttgttgattcctttgctctatattgttcttcca 22464508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 23024984 - 23025043
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||| |||||||||||||||||||||||| ||||  |||| | ||| ||||||||||||||    
T  23024984 gcttttgatgaacttgcttctgatgacgtcatcacttcagaagcac-tttgtcttcaggag 23025043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 25448305 - 25448249
Alignment:
Q  324 ttcagatgcttcaagcttcc-tttttgttgattccattactctcttttgttcttcca 379  Q
    |||||| |||| |||||||| |||||||||||||| || |||||| |||||||||||    
T  25448305 ttcagacgctttaagcttccctttttgttgattcctttgctctctattgttcttcca 25448249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 39200789 - 39200741
Alignment:
Q  331 gcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||| |||||||||||||||||||||| || |||| | |||||||||||    
T  39200789 gctttaagcttcctttttgttgattcctttgctctttattgttcttcca 39200741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 238; Significance: 1e-131; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 13 - 385
Target Start/End: Complemental strand, 18734 - 18362
Alignment:
Q  13 cagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||| ||||| ||||||| ||||||||||||||||||    
T  18734 cagagacacaaactgagtagtggagatagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagaacaagtatccaatgccttcaaatc 18635  T
Q  112 atttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcc 211  Q
     ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |   |||||    
T  18634 ctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaaatcttgtgtctcc 18535  T
Q  212 tgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttca 311  Q
    ||||||||| || |||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||| ||||  ||| || ||| |||| |||||    
T  18534 tgatgaactgcagcttctggtgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcatgagcac-tttgacttca 18436  T
Q  312 ggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| ||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  18435 ggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccaaaacct 18362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 17814960 - 17815333
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||| ||||| ||||||||||| ||||| ||||||    
T  17814960 agcagagacacaaactgagtagtggagatagtggttgtacactccgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgctttcaaa 17815059  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  17815060 tcctttcagaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatct 17815159  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    | ||||||| |  | |||||||| |||||  |||||| ||||||||||||||||||||||||| |||||||||| ||||  |||||| ||||||||||||    
T  17815160 cttgatgaaatttagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgctactgatgacgtcatcacttcaggagcacttttgtctt 17815257  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || |||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17815258 caggagcacttctcttcagatgttttaagcttcctttttgttgattcctttactctcttttgttcttccagaacct 17815333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 11 - 357
Target Start/End: Complemental strand, 19536446 - 19536101
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||| |||||||| |||||||||| ||||||    
T  19536446 agcagagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgctttcaaa 19536347  T
Q  110 tcatttcaaaatagtcgttgtttcact-ctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    ||  ||||||| |||||||| |||||| ||||  ||||| |||||||||| ||||||||| |||||||||||||||| ||||||||||||||| | ||||    
T  19536346 tccattcaaaaaagtcgttgcttcactccttttggtcttttgcaatgcttggacgagattgaatccattgaacagcccttgaagctttaagtcttgcatc 19536247  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    |||||||||||| |  ||||| |  |||||  |||||| |||||||||||||||||||||| ||||||||||||| ||||  |||||| ||| ||||| |    
T  19536246 tcctgatgaacttctgcttcttgcgatctt--gcttctgatgagatgcttctgatgaacttacttctgatgacgtcatcacttcaggagcac-tttgtgt 19536150  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattcc 357  Q
    ||||||||||| || || ||||||||||||||| |||||||||||||||    
T  19536149 tcaggagaacttctctttagatgcttcaagctttctttttgttgattcc 19536101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 41566579 - 41566338
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||| ||||| ||| || |||||||||||||||||    
T  41566579 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatatcaacgctcttcaaagaataaacatccaatgccttcaaa 41566480  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||| ||||| |||||| ||  ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| | |||||    
T  41566479 tcctttcaaaatagacgttgcttcacttttctagtcttctgcaatgcttagacgagattaaatccattgaatagcttttgaagctttaagtcttgcatct 41566380  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||||||||||||||||||| | ||||||||||||| ||||    
T  41566379 cctgatgaactacaacttctgatgatcttcagcttctgatga 41566338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 23413119 - 23412778
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||| || |||||||||||||| ||||||    
T  23413119 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaaaaacaagcatccaatgctttcaaa 23413020  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||| |||||| |||||||||   |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||| | |||||    
T  23413019 tcctttcaaaataatcgttgcttcactcttctggtcttctgcaatgcttggatgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 23412920  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||| || |||||||| ||||                |||||||||||||||||||||||||||||| ||||                  |||    
T  23412919 cctgatgaacttcagcttctggtgatct----------------tgcttctgatgaacttgcttctgatgacgtcatca------------------ctt 23412854  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  23412853 caggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgctcttccagaacct 23412778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 6512573 - 6512348
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||   |||||||||||||    
T  6512573 agcagagacacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagc---caatgccttcaaa 6512477  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||| | |||||    
T  6512476 tcctttcaaaatagtcgttgcttcactcttccagtcttcagcaatgcttagacgagattaaatccactgaacaacctttgaagctttaagtcttgcatct 6512377  T
Q  210 cctgatgaactacaacttctggttatctt 238  Q
    |||||||||||||||||||| || |||||    
T  6512376 cctgatgaactacaacttctagtgatctt 6512348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 281
Target Start/End: Complemental strand, 7745838 - 7745569
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  7745838 agcagagacaaaaaccgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 7745739  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||||||  |||||||| |||||||| || | |||||||||||||||||| |||||||||||||||||| |||||||    
T  7745738 tcctttcaaaatagttgttgcttcactcttctagtcttctccaatgcttggatgcgattaaatccattgaacaacctttgaagctttaagtcttacatct 7745639  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgac 281  Q
    ||||||| ||| || ||||| || |||||  |||||| ||||||||||| |||||||||||||||| |||||    
T  7745638 cctgatgtacttcagcttcttgtgatctt--gcttctgatgagatgcttttgatgaacttgcttcttatgac 7745569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 377
Target Start/End: Original strand, 26784346 - 26784699
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||| || ||| ||||| ||| ||||||||| | | | ||||    
T  26784346 agcagacacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaataagcatccagttcttccaaa 26784445  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||  |   ||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||| || | |||||    
T  26784446 tcctttcaaaatagtcgttgcttcactgctctggtcttttgcaatgcttggacgagattgaatccattgaacagcctttaaagctttaaatcttgcatct 26784545  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||| ||||||||| |||||||| |||||||              ||||||||||||||||||||||||||||| || |  ||| || ||||||||||||    
T  26784546 cctgctgaactacagcttctggtgatcttca--------------gcttctgatgaacttgcttctgatgacgtcatgacttcatgagcacttttgtctt 26784631  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    |||||| ||| || |||||| |||| |||||||||||||||||||||| || ||||||||||||||||    
T  26784632 caggagcacttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttc 26784699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 89567 - 89339
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||| |||||||||| |||||| ||||||    
T  89567 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaatgctcttcaaagaacaagcatgcaatgctttcaaa 89468  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |  ||||||||||||||||| |||||||||   |||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||  | |||||    
T  89467 ttctttcaaaatagtcgttgcttcactcttctggtcttctgcaattcttagacgagattaaatccattgaacaacttttgaagctttaagttttgcatct 89368  T
Q  210 cctgatgaactacaacttctggttatctt 238  Q
    ||||||||||||||||||||||| |||||    
T  89367 cctgatgaactacaacttctggtgatctt 89339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 21910548 - 21910776
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  21910548 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 21910647  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||| |||||| |||||| || ||||||| || |||||||||||||||||||||| ||| |||||||||||| |||||||||| | |||||    
T  21910648 tcctttcaaaataatcgttgcttcacttttccagtcttttgtaatgcttagacgagattaaatcaattcaacagcctttgacgctttaagtcttgcatct 21910747  T
Q  210 cctgatgaactacaacttctggttatctt 238  Q
    |||||||||||  | |||||||| |||||    
T  21910748 cctgatgaactttagcttctggtgatctt 21910776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 21072385 - 21072131
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||||||| ||||||    
T  21072385 agcagagacacaaactgagtagtagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaa 21072286  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||||||   |||||||||||||||  || | |||||||||||| ||||| ||||| |||||||||||| | |||||    
T  21072285 tcctttcaaaatagttgttgcttcactcttctggtcttctgcaatgctgtga-gtgattaaatccatagaacaaccttttaagctttaagtcttgcatct 21072187  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatga 265  Q
    ||||||||||| || |||||||| ||||||||||||| ||||||||||||||||||    
T  21072186 cctgatgaacttcagcttctggtgatcttcagcttctgatgagatgcttctgatga 21072131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 11 - 379
Target Start/End: Original strand, 33022656 - 33023008
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  |||||||| |||||||||||||||||    
T  33022656 agcagagacaaaaacatagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaa 33022755  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||||||||| |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  | |||||    
T  33022756 tcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccattgaacagcctttgaagctttatgt--tgcatct 33022853  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||| ||| ||||||| || ||||              ||||||||||||||||||||||||||||| | ||  |||  | ||| ||||||||    
T  33022854 cctgatgaactgcaaattctggtgattttca--------------gcttctgatgaacttgcttctgatgacgtcaccacttcaaaagcac-tttgtctt 33022938  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||||| | |  | |||||| | || |||||||||||||||||||||| || |||||  |||||||||||    
T  33022939 caggagcagtttttttcagacgttttaagcttcctttttgttgattcctttgctctcgattgttcttcca 33023008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 20550887 - 20551228
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||| || ||| || || ||||||||||||||||||||||||    
T  20550887 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgta-tttgtcaacgctctttaaagaacaagcatccaatgccttcaaa 20550985  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatc 208  Q
    || ||||||||||||||||| |||||||||  ||| |||||||||||||||||||||||||| |||||||||| || |||||||||||||||| | ||||    
T  20550986 tcttttcaaaatagtcgttgcttcactcttctagttttctgcaatgcttagacgagattaaaaccattgaacaaccttttgaagctttaagtcttgcatc 20551085  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    ||||||||||                 ||||||||||| ||||||||||||| |||| ||||||||||||||||| ||||                  ||    
T  20551086 tcctgatgaa-----------------cttcagcttctgatgagatgcttctaatgagcttgcttctgatgacgtcatca------------------ct 20551150  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcc-tttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||| ||| || |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  20551151 tcaggagcacttctcttcagatgcttcaagcttccttttttgttgattccattgctctcttttgttcttccagaacct 20551228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 11 - 359
Target Start/End: Complemental strand, 642849 - 642506
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaaa 109  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| || ||||||||||||||||||||     
T  642849 agcagagacacaa---gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaaacaagcatccaatgccttcaac 642753  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |   ||  || ||| ||||||||||||||     ||||||| |||||| ||  | |||||||||||||||||| ||||||||||||||||||   |||||    
T  642752 tttatttgaattagccgttgtttcactctcctgatcttctgtaatgct-aggtgtgattaaatccattgaacaacctttgaagctttaagtctctcatct 642654  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
     |||||||||| ||| ||||||| ||||||||| ||| ||||| |||||||||||||||||||||||||||||| ||||  |||| | |||  ||| |||    
T  642653 tctgatgaactgcaatttctggtgatcttcagcatctcatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcagaagcac--ttgactt 642556  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccat 359  Q
    |||||  |||  | |||||| |||||||||||||||||||| ||||||||    
T  642555 caggatcacttttcttcagacgcttcaagcttcctttttgtcgattccat 642506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 23881059 - 23881431
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaa- 108  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || ||| ||||| || ||||||||||||||||||||     
T  23881059 agcagagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgcactttgtcaacgctcttcaaaaagcaagcatccaatgccttcaac 23881158  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacat 207  Q
     ||||||  || ||||||||| ||||||||    |||||||||||||| ||| || ||||||||||||| |||| || ||||||||||| ||||   |||    
T  23881159 ttcattt-gaattagtcgttgcttcactctcctggtcttctgcaatgc-taggcgtgattaaatccattaaacaaccttttgaagcttt-agtctctcat 23881255  T
Q  208 ctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtc 307  Q
    || |||||||||| || ||||||||  |||||||||||| ||||| |||||||||||| |||||||||||||| || ||||  |||||| ||   | | |    
T  23881256 cttctgatgaacttcagcttctggtgttcttcagcttctgatgaggtgcttctgatgaccttgcttctgatgatgtcatcacttcaggagca--gtagac 23881353  T
Q  308 ttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| ||| |||  | |||||| |||||||||||| || |||||||||||||| || ||||||||||||| |||||||    
T  23881354 ttcaagagcacttttcttcagacgcttcaagcttcattcttgttgattccattgctatcttttgttcttctagaacct 23881431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 11 - 359
Target Start/End: Complemental strand, 21099849 - 21099503
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || | | ||||| |  |||||||||||||||||||      
T  21099849 agcagagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgttcttcaaaaggcaagcatccaatgccttcagc 21099750  T
Q  110 t-catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    | ||||| ||  |||| |||| |||||||| |  ||||| || |||||| || |  ||||||||||||| |||||||||||||||||||||||    |||    
T  21099749 ttcatttgaat-tagttgttgcttcactctcttggtcttttgtaatgct-aggcatgattaaatccatttaacagcctttgaagctttaagtctctgatc 21099652  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    | ||||||||||  | |||||||| || |||||||||| ||||| ||||| |||||||||||||||||||||||| ||||  |||||| |||  ||| ||    
T  21099651 ttctgatgaactttagcttctggtgattttcagcttctgatgaggtgcttttgatgaacttgcttctgatgacgtcatcacttcaggagcac--ttgact 21099554  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccat 359  Q
    ||| ||| |||  | |||||| ||||||||| |||||||||||||||||||    
T  21099553 tcatgagcacttttcttcagacgcttcaagcctcctttttgttgattccat 21099503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 13545657 - 13545454
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||  ||||||||||| | |||||||||||||||||||| ||||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  13545657 agcagagacaaaaatagagtagtggaggtggtggttgtacacttcgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 13545558  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| |||| |||| |||||        ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | |||||    
T  13545557 tcctttcaaagtagttgttgcttcac--------tcttctgcaatgcttagacgagattaagtccattgaacaacctttgaagctttaagtcttgcatct 13545466  T
Q  210 cctgatgaacta 221  Q
    ||||||||||||    
T  13545465 cctgatgaacta 13545454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 354
Target Start/End: Complemental strand, 29138551 - 29138210
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||| ||  || ||| ||  ||||| ||||||||||||||||| ||    
T  29138551 agcagagacacaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgacaacgctctttgaagaataagcatccaatgccttctaa 29138452  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || ||||||||| |||| |  ||| || |||||||||||||| |||||||||  || ||||  || |||||| |||||| ||||||||  | |||||    
T  29138451 tccttccaaaatagttgttgctatact-ttccagtcttctgcaat-cttagacgattttgaatctgttaaacagcttttgaaactttaagt--tgcatct 29138356  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    ||||||||||||||||||||||| ||  ||||||||| ||  |  |||||||||||||||||||||||||||||| ||||   ||||| ||| |||||||    
T  29138355 cctgatgaactacaacttctggtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatgacgtcatcactacaggagcac-tttgtct 29138257  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcc-tttttgttgat 354  Q
    ||||||  | |  | |||||| |||| |||||||| |||||||||||    
T  29138256 tcaggaacagttttcttcagacgctttaagcttccatttttgttgat 29138210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 230
Target Start/End: Original strand, 31117869 - 31118088
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||  |||||| ||||||||||||||| ||||||||||| ||  || ||  ||||||||||||||||||||||||||    
T  31117869 agcagagacaaaaacagagtagtggaagtagtggatgtacacttcgtacatttgtactttgtcaacactctttgaagaacaagcatccaatgccttcaaa 31117968  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatc 208  Q
    |  ||||||| ||||||||| |||||| || ||||||||||||||||||||||||| |||||||| || |||| || |||||||||||| ||  | ||||    
T  31117969 ttctttcaaattagtcgttgcttcacttttccagtcttctgcaatgcttagacgagtttaaatccgttaaacaaccttttgaagctttatgt--tgcatc 31118066  T
Q  209 tcctgatgaactacaacttctg 230  Q
    |||||||||||| || ||||||    
T  31118067 tcctgatgaactgcagcttctg 31118088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 11 - 281
Target Start/End: Original strand, 30742973 - 30743242
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || |||  || ||||| || |||||||||||||||||    
T  30742973 agcagagaca-aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataaacatccaatgccttcaaa 30743071  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||| |||||| ||  |  || ||||||||||||||  ||||||||| || |||||||| |||| | |||||||||||||||  | |||||    
T  30743072 tcctttcaaaataatcgttgctttgcctttccagtcttctgcaatctttagacgagtttgaatccattaaacaacttttgaagctttaagt--tgcatct 30743169  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgac 281  Q
    ||||||||||| |||||||| || ||  ||||||| | ||  |  ||||||||||||||||||||||||||||    
T  30743170 cctgatgaactgcaacttctcgtaattctcagcttatgataaatttgcttctgatgaacttgcttctgatgac 30743242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 11 - 315
Target Start/End: Original strand, 42243673 - 42243976
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa--gaacaagcatccaatgccttcaa 108  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||  ||| ||||| || ||| ||  |  |||||| |||| |||| ||||||    
T  42243673 agcagagaca-aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgctcttttaaggaacaaacatcaaatgtcttcaa 42243771  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    ||| |||||||||||| |||| |||||| || ||||||||||||||  ||||||||| || ||||| || |||||| |||||||||||||||  | ||||    
T  42243772 atcctttcaaaatagttgttgcttcacttttccagtcttctgcaatttttagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcatc 42243869  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtc 307  Q
    ||||||||||||||| |||||||| ||  |||| || | ||  |  |||||||||||| ||||| ||||||||||| ||||  |||||| || |||||||    
T  42243870 tcctgatgaactacagcttctggtgattctcagtttttgataaatttgcttctgatgaccttgcatctgatgacgtcatcacttcaggagca-ttttgtc 42243968  T
Q  308 ttcaggag 315  Q
    ||||||||    
T  42243969 ttcaggag 42243976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 11993880 - 11994100
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||  ||||||||||||||||||||||   ||||||||| || ||| ||  ||||||||||||||||||| ||||||    
T  11993880 agcagagacaaaaacagagtagtggaagtagtggttgtacacttcgtacatacgtactttgtcaacgctctttgaagaacaagcatccaatgctttcaaa 11993979  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    ||  |||||| ||| ||||| |||||| || |||||||||||||| |||||||||| || ||||| ||||||| | |||||| ||||||||  | |||||    
T  11993980 tcccttcaaattagccgttgcttcactattccagtcttctgcaatccttagacgagtttgaatccgttgaacatcttttgaaactttaagt--tgcatct 11994077  T
Q  210 cctgatgaactacaacttctggt 232  Q
    |||||||||||||| ||||||||    
T  11994078 cctgatgaactacagcttctggt 11994100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 4887014 - 4887253
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||||   ||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  4887014 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacacacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 4887113  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |  ||| || ||||||| ||||||  | |||| || |||||||||||||||| | |||||||||||||||  | ||| |    
T  4887114 tcttttcaaaatagtcgttgctatacttttccagtcttttgcaatcttaagacaagtttaaatccattgaacaacttttgaagctttaagt--tgcatat 4887211  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    | ||||||||| || |||||||| ||  ||||||||| ||||    
T  4887212 cttgatgaactgcagcttctggtgattctcagcttctaatga 4887253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 377
Target Start/End: Complemental strand, 14086684 - 14086332
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaa 108  Q
    |||||||||| |||| ||||||||||| ||| |||||||||||||||||||  ||||||||| || ||| ||   | ||||||||||||||||| |||||    
T  14086684 agcagagacaaaaacagagtagtggaggtagcggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcattcaa 14086585  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaat-ccattgaacagcctttgaagctttaagtcctacat 207  Q
    |||| |||||||||| ||||| |||||| || |||||||||||||| |||||||||| || ||| ||||| |||||| |||||||| ||||||  | |||    
T  14086584 atcacttcaaaatagccgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagt--tgcat 14086487  T
Q  208 ctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtc 307  Q
    |  |||||||||| || |||||||| || || |              |||| |||| ||||||||||||||||| | ||||  |||||| ||| ||||||    
T  14086486 cctctgatgaactgcagcttctggtaattttta--------------gcttttgataaacttgcttctgatgacatcatcacttcaggagcac-tttgtc 14086402  T
Q  308 ttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    |||||||| | |  | |||| | |||| |||||||||||||||||||||| || |||| | |||||||||    
T  14086401 ttcaggagcagttttcttcatacgctttaagcttcctttttgttgattcctttgctctttattgttcttc 14086332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 281
Target Start/End: Original strand, 26759157 - 26759411
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtc 125  Q
    ||||||||||| |||||||||||||||||||||||   |||| | | |  ||| ||  ||||| |||||||||||||||||||||| || ||||||||||    
T  26759157 gagtagtggaggtagtggttgtacacttcgtacaaacttactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtc 26759256  T
Q  126 gttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaac 225  Q
    ||||||  ||| || ||||||||||||||  |||| |||  || ||||| || |||| | |||||||||||||||  | |||||||||||||||||||||    
T  26759257 gttgttatacttttccagtcttctgcaatctttaggcgaatttgaatccgttaaacaacttttgaagctttaagt--tgcatctcctgatgaactacaac 26759354  T
Q  226 ttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgac 281  Q
    ||||||| ||  ||||||||| ||  |  ||||||||||||| ||||||||||||||    
T  26759355 ttctggtgattctcagcttctgataaatttgcttctgatgaatttgcttctgatgac 26759411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 15516962 - 15517181
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||| ||  ||  || ||  ||||| ||||||||||||||||||||    
T  15516962 agcagagaca-aaacagagtagtggaggtagtggttgtacacttcgtacaaaagtactatgccaacactctttgaagaataagcatccaatgccttcaaa 15517060  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || |||||||| ||||| |  ||| || ||||||||||||||  ||||||||| || ||||| ||||||| | |||||||||||||||  | |||||    
T  15517061 tccttccaaaatagccgttgctatacttttccagtcttctgcaatctttagacgagtttgaatccgttgaacaacttttgaagctttaagt--tgcatct 15517158  T
Q  210 cctgatgaactacaacttctggt 232  Q
     ||||||||||||||||||||||    
T  15517159 tctgatgaactacaacttctggt 15517181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 252
Target Start/End: Original strand, 6499231 - 6499471
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaa- 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| || ||||||||| ||||||||||     
T  6499231 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccgatgccttcaac 6499330  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacat 207  Q
     ||||||  ||||||  |||| ||||||||    |||||||||||| | | |  | |||||||||||||||||| || ||||||||||||||||   |||    
T  6499331 ttcattt-gaaatagatgttgcttcactctcctggtcttctgcaatac-tgggtgtgattaaatccattgaacaaccttttgaagctttaagtc--tcat 6499426  T
Q  208 ctcctgatgaactacaacttctggttatcttcagcttcttatgag 252  Q
    || |  ||||||| || |||||||| |||||| |||||| |||||    
T  6499427 cttcatatgaacttcagcttctggtgatcttctgcttctgatgag 6499471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 359
Target Start/End: Complemental strand, 9398879 - 9398557
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaa- 108  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||| ||  |||||| ||||||||||||     
T  9398879 agcagagacacaaactgagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaaaagtaagcattcaatgccttcaac 9398780  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
     ||||||  || ||||||||| | |||        ||| |||  || |||||||||||| ||||||| |||||| |||||||| |||||||||   ||||    
T  9398779 ttcattt-gaattagtcgttgctccac--------tctcctg--at-cttagacgagatcaaatccaatgaacaacctttgaacctttaagtctctcatc 9398692  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    | |||||||||| ||||||||||| ||||| |              |||||||||||||||| |  ||||||||| ||||  |||||| |||  ||| ||    
T  9398691 ttctgatgaacttcaacttctggtgatcttga--------------gcttctgatgaacttgatgttgatgacgtcatcacttcaggagcac--ttgact 9398608  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccat 359  Q
    |||| || ||| || |||| |||||||||||||||||||||||||||||||    
T  9398607 tcagcagcacttctcttcaaatgcttcaagcttcctttttgttgattccat 9398557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 12352940 - 12352763
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaaga-acaagcatccaatgccttcaa- 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| |  ||||||||||||||||| ||     
T  12352940 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaatgcaagcatccaatgcctttaac 12352841  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctt 187  Q
     ||||||  || ||| | ||| ||||| ||     ||||||||||||||||||| |||| ||||||| |||||||||||    
T  12352840 ttcattt-gaattagccattgcttcaccctcctgatcttctgcaatgcttagacaagatcaaatccaatgaacagcctt 12352763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 21199148 - 21198940
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || ||| | | |||||| |||||||||||||||||||    
T  21199148 agcagagacacaaactgagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctttccaaagaacgagcatccaatgccttcaaa 21199049  T
Q  110 -tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
     ||||||  || ||| |||||  ||| | ||   |||||||||| | | ||| || |||||||||| ||||||| ||||||||||||||||||   ||||    
T  21199048 ttcattt-gaattagccgttg-ctcatttttctggtcttctgcagtac-taggcgtgattaaatcctttgaacaacctttgaagctttaagtctctcatc 21198952  T
Q  209 tcctgatgaact 220  Q
    | ||||||||||    
T  21198951 ttctgatgaact 21198940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 25096969 - 25096778
Alignment:
Q  12 gcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtt---aaagctgttcaa-gaacaagcatccaatgccttca 107  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||| ||   || ||| || || |||||||||||||||| |||||    
T  25096969 gcagagaca-aaacagagtagtggaggtagtggttgtacacttcgtacaattgtccttttttttcaacgctctttaaagaacaagcatccaatgtcttca 25096871  T
Q  108 aatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc 201  Q
    |||| |||  || || |||||| |||||||||   |||||||||||||| ||| ||  ||||||||| ||||||| ||||||||||||||||||    
T  25096870 aatccttttgaattaatcgttgcttcactcttctggtcttctgcaatgc-taggcgtaattaaatcctttgaacaacctttgaagctttaagtc 25096778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 25154939 - 25154748
Alignment:
Q  12 gcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtt---aaagctgttcaa-gaacaagcatccaatgccttca 107  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||| ||   || ||| || || |||||||||||||||| |||||    
T  25154939 gcagagaca-aaacagagtagtggaggtagtggttgtacacttcgtacaattgtccttttttttcaacgctctttaaagaacaagcatccaatgtcttca 25154841  T
Q  108 aatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc 201  Q
    |||| |||  || || |||||| |||||||||   |||||||||||||| ||| ||  ||||||||| ||||||| ||||||||||||||||||    
T  25154840 aatccttttgaattaatcgttgcttcactcttctggtcttctgcaatgc-taggcgtaattaaatcctttgaacaacctttgaagctttaagtc 25154748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 255 - 385
Target Start/End: Original strand, 21910762 - 21910892
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgat 354  Q
    ||||||| ||| ||||||||||||||||| ||||  ||| || |||||||||||||||||| ||| || |||||| |||| |||||||||||||||||||    
T  21910762 gcttctggtgatcttgcttctgatgacgtcatcacttcatgagcacttttgtcttcaggagcacttctcttcagacgctttaagcttcctttttgttgat 21910861  T
Q  355 tccattactctcttttgttcttccagaacct 385  Q
    ||  || |||||||||||||||| |||||||    
T  21910862 tcatttgctctcttttgttcttctagaacct 21910892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 280
Target Start/End: Original strand, 33933259 - 33933532
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaa 108  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||| | | || ||| ||   | ||||||||||||||||| || ||    
T  33933259 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatatcaacgctcttttgaggaacaagcatccaatgcgtttaa 33933358  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaat-ccattgaacagc--ctttgaagctttaagtcctac 205  Q
    ||| |||||||||||| |||| |||||| || ||||||| |||||| |||||||||| || ||| ||||| |||| |   |||||||||||||||  | |    
T  33933359 atcctttcaaaatagttgttgcttcacttttccagtcttttgcaatccttagacgaggttgaatcccattaaacaacttttttgaagctttaagt--tgc 33933456  T
Q  206 atctcctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatga 280  Q
    |||  |||||||||| |||||| |||| ||  ||||||||| ||  |  |||||||||||||||  ||||||||||    
T  33933457 atcctctgatgaactgcaacttatggtgattctcagcttctgataaacttgcttctgatgaactgtcttctgatga 33933532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 232
Target Start/End: Complemental strand, 3245583 - 3245367
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| ||||| |||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||||||| ||||||||  |||      
T  3245583 agagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcctttcaattc 3245484  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||||| ||||| |  ||| || |||||||||||||| |||||||||| || ||||| |  |||||  || ||||||||||||  | ||||||||    
T  3245483 tttcaaaatagccgttgctatacttttccagtcttctgcaat-cttagacgagtttgaatccttgaaacagttttggaagctttaagt--tgcatctcct 3245387  T
Q  213 gatgaactacaacttctggt 232  Q
    |||||||| || ||||||||    
T  3245386 gatgaactgcagcttctggt 3245367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 232
Target Start/End: Complemental strand, 28464481 - 28464274
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| ||||||| |||||||||||||||||||||||||||  ||||| ||| || ||| ||  ||||| ||||||||||||||||           
T  28464481 agagacaaaaacagagtagtagagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt------- 28464389  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
      ||||||||| |||||||  ||| ||| ||||||||||||| |||||||||| || ||||| |  |||||| |||||||||||||||  |  |||||||    
T  28464388 --tcaaaatagccgttgttatacttttttagtcttctgcaat-cttagacgagtttgaatccttgaaacagcttttgaagctttaagt--tgtatctcct 28464294  T
Q  213 gatgaactacaacttctggt 232  Q
    |||||||| || ||||||||    
T  28464293 gatgaactgcagcttctggt 28464274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 28139599 - 28139738
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgt-tcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||   |||| ||| || ||| | | ||||| |||||||||||| |||  ||    
T  28139599 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctctatgaagaataagcatccaatgtctttcaa 28139698  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttct 149  Q
    || ||||||||||||||||| |  ||| ||||||||||||    
T  28139699 tcctttcaaaatagtcgttgctatactttttcagtcttct 28139738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 256 - 385
Target Start/End: Complemental strand, 89352 - 89224
Alignment:
Q  256 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgatt 355  Q
    |||||| ||| ||||||||||||||||| ||||  |||| | |||||| | |||||| || ||| || ||||||  ||||||||||||||||||||||||    
T  89352 cttctggtgatcttgcttctgatgacgtcatcacttcagtagcacttt-gacttcagaagcacttctcttcagacacttcaagcttcctttttgttgatt 89254  T
Q  356 ccattactctcttttgttcttccagaacct 385  Q
    || |  ||||||||||||||||||||||||    
T  89253 ccttagctctcttttgttcttccagaacct 89224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 9088961 - 9089171
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| || |||  || |||||  ||||||||||||||||       
T  9088961 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttc--- 9089057  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
          |||||||||||||||   ||| || ||||||||| |||| | |||||||| || | ||| || |||||| |||||| ||||||||  | |||||    
T  9089058 ------caaaatagtcgttgtaatacttttccagtcttcttcaat-catagacgagtttgattcctttaaacagcttttgaaactttaagt--tgcatct 9089148  T
Q  210 cctgatgaactacaacttctggt 232  Q
    ||||||||||| || ||||||||    
T  9089149 cctgatgaactgcagcttctggt 9089171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 30115982 - 30115861
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||||||||||||||||| |||||||||  ||||| ||| || |||  || ||||| ||||||| |||||| |  ||    
T  30115982 agcagagacaaaaacagagtagtggagatagtggttgtacatttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcccttcaa 30115883  T
Q  110 tcatttcaaaatagtcgttgtt 131  Q
    || |||||||||||||||||||    
T  30115882 tcctttcaaaatagtcgttgtt 30115861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 289
Target Start/End: Original strand, 32160763 - 32161037
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatt 114  Q
    ||||| |||| ||||||||||| ||||||| ||||||||||||||   || |||||| || ||| ||  ||| | |||||||||||||||||||||| ||    
T  32160763 agacataaacagagtagtggaggtagtggtcgtacacttcgtacatacgttctttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctt 32160862  T
Q  115 tcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatctcctg 213  Q
    ||||| |||  |||| | |  |  |||||||||  ||  |  ||||||||| || |||||||| |||| |  |||||| ||||| ||  | ||||| |||    
T  32160863 tcaaattagctgttgctactatacttcagtctttcgctttctttagacgagtttgaatccattaaacaactatttgaaactttaggt--tgcatcttctg 32160960  T
Q  214 atgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcag 289  Q
    ||||||||||  ||||||| || | |||||||| || ||  |||||||||||||||||||||||||||||| |||||    
T  32160961 atgaactacagtttctggtgatatacagcttctgatagacttgcttctgatgaacttgcttctgatgacgtcatcag 32161037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 5430106 - 5430228
Alignment:
Q  256 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgatt 355  Q
    |||||||||||||||||||||||||||| | ||  |||| | |||||| ||||||||||| |||  | ||| || |||| ||||||||||||||||||||    
T  5430106 cttctgatgaacttgcttctgatgacgtcaccacttcagaagcacttt-gtcttcaggagcacttttcttcggacgctttaagcttcctttttgttgatt 5430204  T
Q  356 ccattactctcttttgttcttcca 379  Q
    || || |||| | |||||||||||    
T  5430205 cctttgctctttattgttcttcca 5430228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 12352684 - 12352608
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctc-ttttgttcttccagaa 382  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||||||||  |||||  |||||||||||||||    
T  12352684 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccatagctctcaatttgttcttccagaa 12352608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 12352758 - 12352690
Alignment:
Q  215 tgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgt 283  Q
    |||||| || |||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  12352758 tgaacttcagcttctggtgatcttcagcttctgatgagatgcttttgatgaacttgcttttgatgacgt 12352690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 154
Target Start/End: Original strand, 26765501 - 26765634
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| |||||||||||  ||||||||||||||||||||||  ||||| | | |  ||| ||  ||||| |||||||||||||||||||||| || |||||    
T  26765501 aaacagagtagtggaggcagtggttgtacacttcgtacaaacgtactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaa 26765600  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaat 154  Q
    |||| |||| |  ||| || ||||||||||||||    
T  26765601 tagttgttgctatacttttccagtcttctgcaat 26765634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 25930301 - 25930090
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||| ||||||||||||||||| |||||||||  ||||| ||| || |||  || || || |||||||||||||||||       
T  25930301 agcagagacaaaaacagagtagtagagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctttgaaaaataagcatccaatgccttc--- 25930205  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
           ||| ||| |||||||  ||| || ||||||| ||||||  ||||||||| || ||||| || |||| | |||||||||||||||  | |||||    
T  25930204 ------taaattagccgttgttatacttttccagtcttatgcaatctttagacgagtttgaatcctttaaacaacttttgaagctttaagt--tgcatct 25930113  T
Q  210 cctgatgaactacaacttctggt 232  Q
    ||||||||| | || ||||||||    
T  25930112 cctgatgaattgcagcttctggt 25930090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 7745508 - 7745434
Alignment:
Q  311 aggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||| ||| || |||||| |||||||||||||||||||||||| |  || ||||||||||||||| ||||||||    
T  7745508 aggagcacttctcttcagacgcttcaagcttcctttttgttgatccatttgctctcttttgttctttcagaacct 7745434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 10848765 - 10848815
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| |||||||||||||||||||||||||||| ||||||    
T  10848765 agcagagacaaaaacagagtagtggagatagtggttgtacactttgtacaa 10848815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 357
Target Start/End: Complemental strand, 41566348 - 41566247
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgat 354  Q
    ||||||||||||||||||||||||||||  ||||  |||||| ||| |||||||||||||| | | || |||||| | || || |||| |||||||||||    
T  41566348 gcttctgatgaacttgcttctgatgacgacatcacttcaggaacac-tttgtcttcaggagcagttctcttcagacgttttaaccttcatttttgttgat 41566250  T
Q  355 tcc 357  Q
    |||    
T  41566249 tcc 41566247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 21072089 - 21072028
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||||||||||||||||||||||||||| |  |||| |||||||||| ||||||||    
T  21072089 ttcagacgcttcaagcttcctttttgttgattccttagctcttttttgttctttcagaacct 21072028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 5429991 - 5430096
Alignment:
Q  126 gttgtttcactctttcagtcttctgcaatgcttagacgagattaaat-ccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaa 224  Q
    |||| |||||| ||||||||||||||||| |||| ||||| || ||| ||||  |||||| |||||||| ||||||  | |||||||||||||||| ||     
T  5429991 gttgcttcactttttcagtcttctgcaatccttaaacgaggttgaatcccataaaacagcttttgaagccttaagt--tgcatctcctgatgaactgcag 5430088  T
Q  225 cttctggt 232  Q
    ||||||||    
T  5430089 cttctggt 5430096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 359
Target Start/End: Complemental strand, 21198870 - 21198835
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccat 359  Q
    ||||||||||||||||||||||||||||||||||||    
T  21198870 ttcagatgcttcaagcttcctttttgttgattccat 21198835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 379
Target Start/End: Original strand, 4887250 - 4887367
Alignment:
Q  262 atgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcc-tttttgttgattccatt 360  Q
    |||||||||||||||||||||| ||||  |||||| ||||||  |||| ||||  | |  | |||||| |||| |||||||| |||||||||||||| ||    
T  4887250 atgaacttgcttctgatgacgtcatcacttcaggagcacttta-tctttaggaacagttttcttcagacgctttaagcttccctttttgttgattccttt 4887348  T
Q  361 actctcttttgttcttcca 379  Q
     |||||| |||||||||||    
T  4887349 gctctctattgttcttcca 4887367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 11208125 - 11208012
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatcatt 114  Q
    ||||| |||| ||||||||||| |||||||| |||||||||||| || ||||||||| || |||  || |||    |||||||||||| ||||||||  |    
T  11208125 agacaaaaacagagtagtggaggtagtggttatacacttcgtac-atagtactttgtcaacgctctttgaaggctgagcatccaatgcattcaaatctct 11208027  T
Q  115 tcaaaatagtcgttg 129  Q
    |||||||||||||||    
T  11208026 tcaaaatagtcgttg 11208012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 35932151 - 35932101
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  35932151 agcagagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaa 35932101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 315
Target Start/End: Complemental strand, 35986192 - 35986083
Alignment:
Q  206 atctcctgatgaactacaacttctggttatcttcagcttcttatgagat-gcttctgatgaacttgcttctgatgacgttatcagctcaggatcactttt 304  Q
    ||||||||||||||| ||||||||||| ||   |||||||| ||||  | |||||||||||| | |||||||||||||| ||||  |||| | ||| |||    
T  35986192 atctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctgatgaattagcttctgatgacgtcatcacttcagaagcac-ttt 35986094  T
Q  305 gtcttcaggag 315  Q
    |||||||||||    
T  35986093 gtcttcaggag 35986083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 25096659 - 25096598
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||| ||||||| ||||||||| |||| ||||| ||||||||  ||||||||    
T  25096659 ttcagatgcttcaaacttccttcttgttgatttcattgctctcatttgttctcacagaacct 25096598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 25096710 - 25096661
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 303  Q
    |||||||||||||||||||||||||||||| ||||  |||||| ||||||    
T  25096710 tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 25096661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 25154629 - 25154568
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||| ||||||| ||||||||| |||| ||||| ||||||||  ||||||||    
T  25154629 ttcagatgcttcaaacttccttcttgttgatttcattgctctcatttgttctcacagaacct 25154568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 25154680 - 25154631
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 303  Q
    |||||||||||||||||||||||||||||| ||||  |||||| ||||||    
T  25154680 tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 25154631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 379
Target Start/End: Original strand, 31118108 - 31118220
Alignment:
Q  266 acttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactct 365  Q
    |||||||| ||||||||| | ||  |||||| |||||| ||||||| ||| | |  | |||||| |||| |||||||||||||||||||||| || ||||    
T  31118108 acttgcttatgatgacgtcaccacttcaggagcacttt-gtcttcatgagtagttttcttcagacgctttaagcttcctttttgttgattcctttgctct 31118206  T
Q  366 cttttgttcttcca 379  Q
     | |||||||||||    
T  31118207 ttattgttcttcca 31118220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 23478678 - 23478734
Alignment:
Q  324 ttcagatgcttcaagcttc-ctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||||| | ||||| ||||||||||||||| || ||||||||||||||||||    
T  23478678 ttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttcca 23478734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 33933523 - 33933555
Alignment:
Q  256 cttctgatgaacttgcttctgatgacgttatca 288  Q
    |||||||||||||||||||||||||||||||||    
T  33933523 cttctgatgaacttgcttctgatgacgttatca 33933555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 355
Target Start/End: Original strand, 6499525 - 6499556
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgatt 355  Q
    ||||||||||||||||||||||||||||||||    
T  6499525 ttcagatgcttcaagcttcctttttgttgatt 6499556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 6512348 - 6512306
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcagga 296  Q
    |||||||||||||||||||||||||||||| ||||  ||||||    
T  6512348 tgcttctgatgaacttgcttctgatgacgtcatcacttcagga 6512306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 23391531 - 23391471
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||| |||||||||||||||||||||||| ||||  |||| | ||| ||||||||||||||    
T  23391531 tgcttatgatgaacttgcttctgatgacgtcatcacttcagaagcac-tttgtcttcaggag 23391471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 30115792 - 30115692
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagctt-cctttttgttga 353  Q
    ||||||||||||||||||||| ||||||| ||||  |||||| |||||    ||||||||| | |  | |||||| |||| |||||| ||||||||||||    
T  30115792 gcttctgatgaacttgcttctaatgacgtcatcacttcaggagcacttcaaacttcaggagcagttttcttcagacgctttaagcttccctttttgttga 30115693  T
Q  354 t 354  Q
    |    
T  30115692 t 30115692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 81)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 377
Target Start/End: Original strand, 29693303 - 29693671
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||||||||| |||||| ||||||    
T  29693303 agcagagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaaagctcttcaaagaacaagcatacaatgctttcaaa 29693402  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||||||||| | |||||    
T  29693403 tcctttcaaaatagtggttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattaaacagtctttggagctttaagtcttgcatct 29693502  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcac-ttttgtct 308  Q
    ||| |||||||||||||| |||| ||||||||||| | |||||||||||||||||||||||||||||||||||| ||||  |||||| ||| ||||||||    
T  29693503 cctaatgaactacaacttatggtgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttttgtct 29693602  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    ||| ||| ||| || ||||||||||| ||||||||||||||||||||||  | ||||||||||||||||    
T  29693603 tcaagagcacttctcttcagatgctttaagcttcctttttgttgattcctctgctctcttttgttcttc 29693671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 39693523 - 39693897
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||| ||||||    
T  39693523 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaa 39693622  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| | |||||    
T  39693623 tcctttcaaaatagtcattgcttcactcttccagtcttctgcaatgcttagacgagattgaatccattgaacaacctttgaagctttaagtcttgcatct 39693722  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||| |||||||||||||| ||||||||||||| |||| |||||| ||||||||||| |||||||||||| ||||  |||||  ||| |||| |||    
T  39693723 cctgatgagctacaacttctggtgatcttcagcttctgatgacatgcttttgatgaacttgtttctgatgacgtcatcacttcaggtgcac-tttgactt 39693821  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| || ||| || ||| ||||||| ||||||| |||||||||||||  || |||||||| |||||||||||||||    
T  39693822 cagaagcacttctcttcggatgctttaagcttcttttttgttgattcatttgctctctttcgttcttccagaacct 39693897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 17914447 - 17914821
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||| ||||||||||| ||||||||||||    
T  17914447 agcagagaaacaaattgagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaa 17914546  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| || | || ||    
T  17914547 tcctttcaaaatagttgttgcttcactcttacagtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaagctttaactcttgcaact 17914646  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||| |||| ||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| ||||||| || |  ||| || ||| |||| |||    
T  17914647 cctaatgagctacaacttctagtgatcttcagcttctgatgagatgcttctgatgaacttgcttctaatgacgtcattacttcaagagcac-tttgactt 17914745  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
     ||||| ||| || ||||||||||||||||||||||| |||||||||| || ||||||||| ||||||||||||||    
T  17914746 taggagcacttctcttcagatgcttcaagcttcctttctgttgattcctttgctctcttttattcttccagaacct 17914821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 16681466 - 16681095
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||| ||||||||||||    
T  16681466 agcagagacacaaactgagtactagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatctaatgccttcaaa 16681367  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||    
T  16681366 tcctttcaaactagacgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctctaagtcttgcatct 16681267  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||  | ||||| || |||||  |||| | |||||||||||||||||||||||||||||||||||| ||||  ||| || ||||||||||||    
T  16681266 cctgatgaactttagcttctagtgatctt--gcttatgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcatgagcacttttgtctt 16681169  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || |||||| |||| ||||||| |||||||||||||  || || ||  |||||||||||||||||    
T  16681168 caggagcacttctcttcagacgctttaagcttcatttttgttgattcatttgctatc--ttgttcttccagaacct 16681095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 22 - 385
Target Start/End: Original strand, 19943234 - 19943599
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa--gaacaagcatccaatgccttcaaatcatttcaaa 119  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||| || ||| || ||  |||||||||||||||||||||||||| |||||||    
T  19943234 aaacagagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctttttaaaggaacaagcatccaatgccttcaaatcctttcaaa 19943333  T
Q  120 atagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatctcctgatgaa 218  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||||||||    
T  19943334 atagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaatagccttttgaagctttaagtcttgcatctcctgatgaa 19943433  T
Q  219 ctacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaac 318  Q
    || || ||||| || ||||| ||||||| ||||||||||||||||||||||||||| |||| ||| ||||  |||||| |||| |   ||||||||| ||    
T  19943434 cttcagcttctagtgatctttagcttctgatgagatgcttctgatgaacttgcttccgatgtcgtcatcacttcaggagcactat--acttcaggagcac 19943531  T
Q  319 tgctattcagatgcttcaagcttccttttt-gttgattccattactctcttttgttcttccagaacct 385  Q
    | || ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  19943532 ttctcttcagatgcttcaagcttcttttttggttgattccattactctcttttgttcttctagaacct 19943599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 24646326 - 24646699
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||| ||| ||||||||||||||| ||||    
T  24646326 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgcctgcaaa 24646425  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||  |||| | |||||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| || | |||||    
T  24646426 tcctttcaaaatagctgttgctacactcttttagtcttatgcaatgcttagacgagattaaatcaattgaacaacctttgaagctttaactcttgcatct 24646525  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    | |||||||||| | |||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||| ||||  |||| | |||| |   |||    
T  24646526 cttgatgaactagagcttctggtgatcttcagcttctgataagatgcttctgatgaacttgcttctgatgacgtcatcacttcagaagcactat--actt 24646623  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || |  ||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||    
T  24646624 caggagcacttctctctagatgcttcaagcttcctttttgttgattccattggtatcttttgttcttccaaaacct 24646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 12 - 385
Target Start/End: Complemental strand, 20382556 - 20382185
Alignment:
Q  12 gcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaat 110  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||| |||||| |||||| | | |||||||    
T  20382556 gcagagacacaaactgattagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaaacatccactactttcaaat 20382457  T
Q  111 catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctc 210  Q
    | ||||| ||||| ||||| ||||||| |  |||||| |||||||| | ||||||||| |||||||||||||||||||||||||||||| | | ||||||    
T  20382456 cctttcagaatagccgttgcttcactcctctagtcttttgcaatgcatggacgagattgaatccattgaacagcctttgaagctttaagacttgcatctc 20382357  T
Q  211 ctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttc 310  Q
    |||||||||| || |||||||| |||||  |||||| |||||||||||||||||||||||||| ||||||||| ||||  |||||| ||| |||| ||||    
T  20382356 ctgatgaacttcagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttttgatgacgtcatcacttcaggagcac-tttgacttc 20382260  T
Q  311 aggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||| ||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20382259 aggagcacttctcttcagacgcttcaagcttcctttttgttgattccattactctcttttgttctttcagaacct 20382185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 19156184 - 19156544
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  19156184 agcagagacacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 19156283  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||||||||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||    
T  19156284 tcctttcaaattagtcgttgcttcactcttctagtcttctgcaatgcatagacgagattaaatccattgaacagcctttgaagctttaattcttgcatct 19156383  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    | ||||||||||||||||||||| |||||||              |||||||||||||||||||||||||| || ||||  |||||| ||| |||| |||    
T  19156384 cttgatgaactacaacttctggtgatcttca--------------gcttctgatgaacttgcttctgatgatgtcatcacttcaggagcac-tttgactt 19156468  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || |||||| |||| ||||||||||||||||||| || || |||||||||||||||| |||||||    
T  19156469 caggagcacttctcttcagacgctttaagcttcctttttgttgatccctttgctctcttttgttcttctagaacct 19156544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 381
Target Start/End: Complemental strand, 17525889 - 17525523
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatca 112  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||| ||||| ||||||||||||||||| ||||||||     
T  17525889 agagacacaaactgagtagtgaagatagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 17525790  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatctcc 211  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| || ||||||| |||||||| | |||||||    
T  17525789 tttcaaaatagttgttgtttcactcttccagtcttctgcagtgcttagacgatattaaatccattgaacaaccttttgaagatttaagtcttgcatctcc 17525690  T
Q  212 tgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgt-tatcagctcaggatcacttttgtcttc 310  Q
    ||||||||||||  ||||||| |||||  |||||| ||||||||||||||| ||||||||||||||||| ||  ||||  |||||| |||  ||||||||    
T  17525689 tgatgaactacagtttctggtgatctt--gcttctgatgagatgcttctgacgaacttgcttctgatgatgtcaatcacttcaggagcac--ttgtcttc 17525594  T
Q  311 aggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccaga 381  Q
    ||||| ||| || |||||||||||||| |||| |||||||||||| | || ||||||||||||||| ||||    
T  17525593 aggagcacttcttttcagatgcttcaatcttcatttttgttgatttctttgctctcttttgttctttcaga 17525523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 11 - 279
Target Start/End: Original strand, 16207294 - 16207563
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  16207294 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 16207393  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||    
T  16207394 tcctttcaaaatagtagttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcgtttgaagctttaagtcttgcatct 16207493  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatg 279  Q
    |||||||||||| | |||||||| ||||| ||||||| |||||||||||||||| |||||||||| ||||    
T  16207494 cctgatgaactagagcttctggtgatctttagcttctaatgagatgcttctgataaacttgcttcagatg 16207563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 16188972 - 16189361
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||  ||||| ||||||||||||||||||||    
T  16188972 agcagagacacatactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttagaagaataagcatccaatgccttcaaa 16189071  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||||| |||| |||||||||||||||||| | |||||    
T  16189072 tcatttcaaaatagtcgttgcttcactcttccagtcttctgcaatggttggacgagattaaatccattaaacaacctttgaagctttaagtcttgcatct 16189171  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctc-aggatcacttt----- 303  Q
    ||| ||||||| |  |||||||| |||||  |||||| ||||||| ||||||||||||||||||||||||| || |||| ||| |||| ||||||         
T  16189172 cctaatgaacttcggcttctggtgatctt--gcttctaatgagatacttctgatgaacttgcttctgatgatgtcatca-ctctaggagcacttttactt 16189268  T
Q  304 -----------tgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
               || ||||| ||| ||| || |||||| ||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  16189269 caagagcactgtgacttcaagagcacttctcttcagacgcttcaagcttcctttttgttgattcatttgctctcttttgttcttccagaacct 16189361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 12 - 385
Target Start/End: Original strand, 17267463 - 17267833
Alignment:
Q  12 gcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaat 110  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||| || ||| ||||| ||||||||||| ||||| |||||||    
T  17267463 gcagagacaaaaactgagtagtggagatagtggttgtacaattcgtacaattgtactatgtcaatgctcttcaaagaacaagcatctaatgctttcaaat 17267562  T
Q  111 catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctc 210  Q
    | |||||||||||  |||| ||||||| | | ||||| |||||||||| ||||||||| || |||||||||| |||||||||||||||||| | ||||||    
T  17267563 cctttcaaaatagctgttgcttcactcctgcggtcttttgcaatgcttggacgagattgaa-ccattgaacaacctttgaagctttaagtcttgcatctc 17267661  T
Q  211 ctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttc 310  Q
     ||||||||| || |||||||| |||||  |||||| ||||||||||| |||||||||||||||| || |||| ||||  |||| | |||||| | ||||    
T  17267662 ttgatgaacttcagcttctggtgatctt--gcttctgatgagatgcttttgatgaacttgcttctaataacgtcatcacttcagaagcacttt-gacttc 17267758  T
Q  311 aggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||   ||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  17267759 aggcacacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 17267833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 39 - 359
Target Start/End: Original strand, 33082873 - 33083192
Alignment:
Q  39 tagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactc 137  Q
    |||||||||||||||||||||||||||||||||| || ||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  33082873 tagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactc 33082972  T
Q  138 tttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatct 237  Q
    ||    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||| || |||||||| ||||    
T  33082973 ttctgatcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatct 33083072  T
Q  238 tcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaa 337  Q
    |  |||||| ||||| |||||| |||||||||| |||| ||||||| ||||  ||| || |||||||| ||||| ||| ||| || |||||| |||| ||    
T  33083073 t--gcttctgatgagttgcttcagatgaacttgtttctaatgacgtcatcacttcaagagcacttttgacttcaagagcacttctcttcagacgctttaa 33083170  T
Q  338 gcttcctttttgttgattccat 359  Q
    ||||| ||||||||||||||||    
T  33083171 gcttcttttttgttgattccat 33083192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 12757923 - 12757690
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatca 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||||     
T  12757923 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 12757824  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| | ||||||||    
T  12757823 tttcaaaatagttgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacatcctttaaagttttaagtcttgcatctcct 12757724  T
Q  213 gatgaactacaacttctggttatcttcagcttct 246  Q
    ||||||||| | || ||||| |||||||||||||    
T  12757723 gatgaactagagctactggtgatcttcagcttct 12757690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 14 - 385
Target Start/End: Complemental strand, 17441967 - 17441612
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatca 112  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || ||| ||||| ||| ||||||||||||| ||||||||     
T  17441967 agagacacaaaatgagtagtggagatagtggttgtacacttagtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgc-ttcaaatcc 17441869  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||||||||||| || | |||| ||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||| | ||||||||    
T  17441868 tttcaaaatagtcgttgctttagtcttccagtcttctgcaatgcttagaggagattaagtccattgaacaacctttaaagctttaagtcttgcatctcct 17441769  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcag 312  Q
    ||||||||| | |||||||| ||||||||||||| || |||||||||||               ||||||| ||||  |||||| ||| |||| ||||||    
T  17441768 gatgaactagagcttctggtgatcttcagcttctgattagatgcttctg---------------atgacgtcatcacttcaggagcac-tttgacttcag 17441685  T
Q  313 gagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| ||| || |||||| |||| |||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  17441684 gagcacttctcttcagacgctttaagcttccttttcgttgattcctttgctctcttttgttcttccagaacct 17441612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 21932871 - 21933263
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||| || ||| ||  || ||||||||| ||||||||| |||    
T  21932871 agcagagacaaacactgagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctctttgaaaaacaagcatacaatgcctttaaa 21932970  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  21932971 tcctttcaaaatagccgttgtttcactctttcagtcttatgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 21933070  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcact------- 301  Q
    ||||||||| || | |||||||| || |||||||||| ||| |  |||||||||| ||||| ||||||||||||| | ||  |||||| ||||           
T  21933071 cctgatgaaatagagcttctggtgattttcagcttctgatgaacttgcttctgataaacttccttctgatgacgtcaccacttcaggagcactttgtctt 21933170  T
Q  302 ---------tttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
             |||| ||||||||| | | || |||||| |||| |||||||||||||||||||||| || |||||| |||||||||||||||||    
T  21933171 caagagcactttgacttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 21933263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 14 - 265
Target Start/End: Complemental strand, 18321319 - 18321067
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatca 112  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||  ||||| |||||||||||||||||| |||||||     
T  18321319 agagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgccctcaaatcc 18321220  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||| |||||||  |||| ||||||||||  ||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  18321219 tttgaaaatagctgttgcttcactcttttggtctcatgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 18321120  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatga 265  Q
    |||||||| || |||||||| ||||||  ||||| ||||||||||||||||||    
T  18321119 gatgaacttcagcttctggtgatcttctacttctgatgagatgcttctgatga 18321067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 18121269 - 18120913
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||| ||| |||||||   ||||||||||||||||||||||||||| ||| ||  |||||||||||||||||||||| |||    
T  18121269 agcagagacagaaacagagtagttgaggtagtggt---acacttcgtacaattgtactttgttaatgctctttgaagaacaagcatccaatgcctttaaa 18121173  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||  |||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||    
T  18121172 tcctttcaaaatagcagttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaaactttaagtcttgcatct 18121073  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||| | |||||||| ||||| ||||||| |||||||||||||               |||| ||| ||||  |||||| ||| ||||||||    
T  18121072 cctgatgaactagagcttctggtgatctttagcttctgatgagatgcttct---------------gatggcgtcatcacttcaggagcac-tttgtctt 18120989  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| | | || |||| | |||| |||||||||||||||||||||  || ||||||||||||||||||||||||    
T  18120988 caggagcagttctcttcaaacgctttaagcttcctttttgttgattcatttgctctcttttgttcttccagaacct 18120913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 84 - 385
Target Start/End: Complemental strand, 20255654 - 20255357
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  20255654 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgtaatgcttagacgagattaaatccattgaacag 20255555  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgt 283  Q
    ||||||| |||||||||| | |||   || |||| ||  | |||||||| ||||||||||||| ||||||| |||||||||||||| ||| |||||||||    
T  20255554 cctttgacgctttaagtcttgcat---ctaatgagctttatcttctggtgatcttcagcttctgatgagatacttctgatgaacttccttatgatgacgt 20255458  T
Q  284 tatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaac 383  Q
     ||||  |||||| ||| |||| ||||||||| | | || |||||| |||| || ||||||||||||||||||| || |||||||||||| |||||||||    
T  20255457 catcacttcaggagcac-tttgacttcaggagcagttctcttcagacgctttaaacttcctttttgttgattcctttgctctcttttgttgttccagaac 20255359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 602883 - 602524
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||| ||||||    
T  602883 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaa 602784  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||| ||| |||||||||  ||||||||||||||||||||||||||| |||||| |||||| ||||||||| |||||||| | ||| |    
T  602783 tcctttcaaaatagtcattgcttcactcttcaagtcttctgcaatgcttagacgagattgaatccaatgaacaacctttgaagttttaagtcttgcattt 602684  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||  | ||||| || ||||| |              |||| |||||||||||||||||||||||| ||||  |||||| |||  | | |||    
T  602683 cctgatgaactttagcttcttgtgatcttta--------------gcttttgatgaacttgcttctgatgacgtcatcacttcaggagcac--tagactt 602600  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| |   || || || ||| ||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||    
T  602599 cagcaacgcttctctttagacgcttcaaacttcctttttgttgattccttagctctcttttgttcttccagaacct 602524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 17701733 - 17702088
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaag-aacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||  || ||| || ||| ||  |||||||||||||||||||    
T  17701733 agcagagacacaaactgagtagtggaggtagtggttgtaaacttcgtacaattatactttgccaacgctcttaaaggaattagcatccaatgccttcaaa 17701832  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||||||    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||   |||||    
T  17701833 tcctttcaaaatagttgttgcttcactcttctgatcttctgcaatgcttagacgagattaaattcattgaacaacctttgaagctttaagtctctcatct 17701932  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
     |||||||||| || |||||||| ||| || |||||| | ||| |||||||||||||||||||                  |||||| ||  |||| |||    
T  17701933 tctgatgaacttcagcttctggtgatcatctgcttctgaagaggtgcttctgatgaacttgct------------------tcaggagca--tttgactt 17702012  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| || ||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  17702013 cagaagcacttctcttcagatgcttcaagcttcctttttgttgattccataactctcttttgttattccagaacct 17702088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 23185389 - 23185150
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||| ||||||| |||||||||||||||||||||||||||||||||| || ||| ||  ||||| ||||||||||||||||||||    
T  23185389 agcagagacaaaaacagagcagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaa 23185290  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  | |||||    
T  23185289 tcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttatgt--tgcatct 23185192  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||||||||| || |||||||| || |||||||||| ||||    
T  23185191 cctgatgaactgcagcttctggtgattttcagcttctgatga 23185150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 11 - 348
Target Start/End: Original strand, 17797410 - 17797745
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  |||||||||||||||||||||||||     
T  17797410 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaat 17797509  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||| |||||  ||||| || |||||||||| |||| |||||||||||| ||||||||||||| | ||||| |||||||||  | |||||    
T  17797510 tcctttcaaactagccgttgcatcacttttccagtcttctgtaatggttagacgagattgaatccattgaacaacttttgaggctttaagt--tgcatct 17797607  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    |||||||| || || |||||||| || |||||||||| ||| |  ||||||||||||| |||||||||||||||| | ||  |||||| ||| |||||||    
T  17797608 cctgatgagctgcagcttctggtgattttcagcttctgatgaacttgcttctgatgaatttgcttctgatgacgtcaccatttcaggagcac-tttgtct 17797706  T
Q  309 tcaggagaactgctattcagatgcttcaagcttccttttt 348  Q
    ||||||| | |  | ||||||||||| |||||||||||||    
T  17797707 tcaggagcagt-tttttcagatgctttaagcttccttttt 17797745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 29 - 347
Target Start/End: Complemental strand, 23263757 - 23263438
Alignment:
Q  29 gtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgt 127  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| || ||| ||  |||||||| ||||||||||||||||||| ||||||||||||| |    
T  23263757 gtagtggaggtagtggttgtacacttcgtacaactgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaatagtcat 23263658  T
Q  128 tgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagct-ttaagtcctacatctcctgatgaactacaact 226  Q
    ||||||||||||  ||||||||||| || ||||||||||||||||| |||||||| ||||||||| | ||||||  | |||||||||||||||| || ||    
T  23263657 tgtttcactcttctagtcttctgcattgtttagacgagattaaatctattgaacaacctttgaagttcttaagttttgcatctcctgatgaacttcagct 23263558  T
Q  227 tctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattc 326  Q
    |||| | |||||  |||||| ||||| |||||||||||||||||||||||||||||| ||||  |||||| | |||||  ||||||||| ||| || |||    
T  23263557 tctgatgatctt--gcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcgctttt-acttcaggagcacttctcttc 23263461  T
Q  327 agatg--cttcaagcttcctttt 347  Q
    ||| |  ||| ||||||||||||    
T  23263460 agaagcactttaagcttcctttt 23263438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 357
Target Start/End: Original strand, 18679802 - 18680132
Alignment:
Q  10 aagcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaa 108  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||||||| |||||    
T  18679802 aagcagagacacaaactgagtagtagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaa 18679901  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    ||| | ||||||||||||||| || |||| |   ||||| |||||||||||||||||||| |||||| |||||  ||||||||||| |||||| | ||||    
T  18679902 atcctatcaaaatagtcgttgctttactcctctggtcttttgcaatgcttagacgagattgaatccactgaactacctttgaagctctaagtcttgcatc 18680001  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    | |||||||| |  | ||||| || ||||                |||||||||||||||||||||||||||||| ||||  |||||| ||| |||| ||    
T  18680002 ttctgatgaaatgaagcttctagtgatct----------------tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgact 18680084  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattcc 357  Q
    ||||||| ||| || ||||||||||| ||||||||||||||||||||||    
T  18680085 tcaggagcact-ctcttcagatgcttaaagcttcctttttgttgattcc 18680132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 14 - 385
Target Start/End: Original strand, 19707497 - 19707864
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa-tc 111  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| || | | ||| |||||||| ||| ||||||||||||| ||    
T  19707497 agagacacaaactgagtagaggatgtagtggttgtacacttcgtacaattgtactttgtcaacgttcttcaaagaacaaccattcaatgccttcaaattc 19707596  T
Q  112 atttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcc 211  Q
    ||||  || ||| ||||| |||||||||   ||||||||||||| ||||    |||||| ||| ||||||||||||||||||||||| || | ||||| |    
T  19707597 attt-gaattagccgttgcttcactcttctggtcttctgcaatg-ttaggaatgattaagtcctttgaacagcctttgaagctttaattctttcatcttc 19707694  T
Q  212 tgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttca 311  Q
    |||||| || || |||||||  |||||  |||||| ||||| ||||||| ||||||||||||||||||| || ||||  |||||| |||  ||  |||||    
T  19707695 tgatgatcttcagcttctggcgatctt--gcttctaatgaggtgcttctaatgaacttgcttctgatgatgtcatcacttcaggagcac--ttaacttca 19707790  T
Q  312 ggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| |||  | ||||||| ||||||||||||||||||||||||||||| | ||| |||||||||||| |||||    
T  19707791 ggagcacttttcttcagattcttcaagcttcctttttgttgattccattgccctcatttgttcttccataacct 19707864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 12 - 251
Target Start/End: Complemental strand, 30421591 - 30421352
Alignment:
Q  12 gcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc---aagaacaagcatccaatgccttcaa 108  Q
    ||||||||| |||| ||||||||||| ||||||||||| |||||||||||| ||||||||| || ||| ||    |||||||||||||||||||||||||    
T  30421591 gcagagacaaaaacagagtagtggaggtagtggttgtaaacttcgtacaat-gtactttgtcaacgctctttgaaaagaacaagcatccaatgccttcaa 30421493  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    |||  |||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | ||||    
T  30421492 atccattcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttatgt--tgcatc 30421395  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    | |||||||||| || |||||||| || || ||||||| ||||    
T  30421394 ttctgatgaactgcagcttctggtgattttgagcttctgatga 30421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 18718989 - 18719217
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||| ||||| ||||||||||||||||| ||||||    
T  18718989 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgacaacgctcttcaaagaacaagcatccaatgctttcaaa 18719088  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || | ||||||||||||||| ||||||| |   ||||| ||||||||||  |||||||| |||||| |||||||||||||||||| |||||| | |||||    
T  18719089 tcctatcaaaatagtcgttgcttcactcctctggtcttttgcaatgcttgaacgagattgaatccactgaacagcctttgaagctctaagtcttgcatct 18719188  T
Q  210 cctgatgaactacaacttctggttatctt 238  Q
     |||| |||||  | |||||||| |||||    
T  18719189 tctgaagaacttaagcttctggtgatctt 18719217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 131 - 288
Target Start/End: Original strand, 22745596 - 22745753
Alignment:
Q  131 ttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctg 230  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||| | ||||||    
T  22745596 ttcacacttccagtcttctacaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctg 22745695  T
Q  231 gttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatca 288  Q
    || ||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  22745696 gtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgacgacgtcatca 22745753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 11 - 281
Target Start/End: Complemental strand, 15336251 - 15335981
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||| ||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||  | ||| ||||||||||||||||||||    
T  15336251 agcaaagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaa 15336152  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| | |||||||||||||||  ||||||||| || | |||||| |||| | |||||||||||||||  | |||||    
T  15336151 tcctttcaaaatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaaacaacttttgaagctttaagt--tgcatct 15336054  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgac 281  Q
    |||||||||||||| |||||||| ||  ||||||||| ||  |  ||||||||||||  ||||||||||||||    
T  15336053 cctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgactttgcttctgatgac 15335981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 11 - 281
Target Start/End: Complemental strand, 15425316 - 15425046
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||| ||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||  | ||| ||||||||||||||||||||    
T  15425316 agcaaagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaa 15425217  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| | |||||||||||||||  ||||||||| || | |||||| |||| | |||||||||||||||  | |||||    
T  15425216 tcctttcaaaatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaaacaacttttgaagctttaagt--tgcatct 15425119  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgac 281  Q
    |||||||||||||| |||||||| ||  ||||||||| ||  |  ||||||||||||  ||||||||||||||    
T  15425118 cctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgactttgcttctgatgac 15425046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 11 - 281
Target Start/End: Complemental strand, 15516620 - 15516350
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||| ||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||  | ||| ||||||||||||||||||||    
T  15516620 agcaaagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaa 15516521  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| | |||||||||||||||  ||||||||| || | |||||| |||| | |||||||||||||||  | |||||    
T  15516520 tcctttcaaaatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaaacaacttttgaagctttaagt--tgcatct 15516423  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgac 281  Q
    |||||||||||||| |||||||| ||  ||||||||| ||  |  ||||||||||||  ||||||||||||||    
T  15516422 cctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgactttgcttctgatgac 15516350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 11 - 315
Target Start/End: Complemental strand, 40845550 - 40845248
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||| ||| || |||  || ||||| ||||||||||||||||| ||    
T  40845550 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaataagcatccaatgccttccaa 40845451  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || |||||||||||||| |  ||| || ||||||||||||||  ||||||||| || ||||| || |||| | ||||||||||||||  || |||||    
T  40845450 tccttccaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcc-ttaaacaacttttgaagctttaag--ctgcatct 40845354  T
Q  210 cctgatgaactacaacttctggtta-tcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtc 307  Q
    |||||||||||| | |||||||| | |||| ||||||| ||  |  |||||||||||| ||||||||||||||||| ||||  |||||| ||| ||||||    
T  40845353 cctgatgaactatagcttctggtgagtctt-agcttctgataaacttgcttctgatgaccttgcttctgatgacgtcatcacttcaggagcac-tttgtc 40845256  T
Q  308 ttcaggag 315  Q
    ||||||||    
T  40845255 ttcaggag 40845248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 14 - 232
Target Start/End: Original strand, 24551265 - 24551482
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| ||||  |||||||||| |||||||||||||||||||||||  ||||| |||||| ||| ||  ||||||||||||||||||||||||||||     
T  24551265 agagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaaacgtactatgttaacgctctttgaagaacaagcatccaatgccttcaaatct 24551364  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||||||||||| |||||| || ||||||||||||||  ||||||||| || |||||||| |||| | |||||||| ||||||  | |||| | |    
T  24551365 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccattaaacaacttttgaagccttaagt--tgcatcccat 24551462  T
Q  213 gatgaactacaacttctggt 232  Q
    |||||||| || ||||||||    
T  24551463 gatgaactgcagcttctggt 24551482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 315
Target Start/End: Original strand, 22673766 - 22674069
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| |||||||||||| |||| ||    
T  22673766 agcagagacaaaaacaaagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaa 22673865  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || ||||||||  |||| |  ||| ||  |||||||||||||    ||||||| || ||||| || |||| | |||||||||||||||  | |||||    
T  22673866 tccttccaaaatagatgttgctatacttttctagtcttctgcaatctccagacgagtttgaatccgttaaacaacttttgaagctttaagt--tgcatct 22673963  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    || |||||||||||||||||||| ||||||||||||| ||  |  |||||||||||||||||||||||||||||| ||||  |||||| |||| || |||    
T  22673964 ccggatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactatt-tct 22674062  T
Q  309 tcaggag 315  Q
    |||||||    
T  22674063 tcaggag 22674069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 281
Target Start/End: Original strand, 36105183 - 36105453
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||| ||||||| |||||||||||||||| ||||||  ||||| | | || ||| ||  ||||| || |||||||||||||||||    
T  36105183 agcagagacaaaaacagagcagtggaggtagtggttgtacactttgtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaa 36105282  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || |||||||| |||||||  ||| || || |||||||||||  ||||||||| || ||||| || |||||| |||||||||||||||  | |||||    
T  36105283 tccttccaaaatagccgttgttatacttttccaatcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcatct 36105380  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgac 281  Q
    |||||||||||| | |||||||| || |||||||||| ||  |  ||||||||||||||||||||||||||||    
T  36105381 cctgatgaactatagcttctggtgattttcagcttctgataaacttgcttctgatgaacttgcttctgatgac 36105453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 283
Target Start/End: Original strand, 9320557 - 9320830
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaa 108  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||||| | |||||||| || ||| ||   ||||| ||||||||||||| |||||    
T  9320557 agcagagaca-aaacagagtagtggaggtagtggttgtacacttcgtacaaatatactttgtcaacgctcttttgaagaataagcatccaatgcgttcaa 9320655  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatcc-attgaacagcctttgaagctttaagtcctacat 207  Q
    ||| |||||||||| | |||| |||||| || ||||||||||||||  ||||||||| || ||||| ||| |||||| |||||||| ||||||  | |||    
T  9320656 atcctttcaaaataattgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccaattaaacagcttttgaagccttaagt--tgcat 9320753  T
Q  208 ctcctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgt 283  Q
    |  |||||||||| || |||||||| || || ||||||| ||  |  ||||||||||||||| ||||||||||||||    
T  9320754 cctctgatgaactgcagcttctggtgatttttagcttctgataaacttgcttctgatgaactcgcttctgatgacgt 9320830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 280
Target Start/End: Original strand, 1237625 - 1237894
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    ||||||||||  ||| ||||||||||| |||||||||||||||||| ||||  ||||||||| || ||| ||  ||||||||  ||||||||||||||||    
T  1237625 agcagagacaacaacagagtagtggaggtagtggttgtacacttcgcacaaaagtactttgtcaacgctctttgaagaacaaatatccaatgccttcaaa 1237724  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| || | ||||||||||||  ||||||||| || |||||||| |||||| |||||||| ||||||  | ||||     
T  1237725 tcctttcaaaatagtcgttgcttcacttttccggtcttctgcaatctttagacgaggttgaatccattaaacagcttttgaagccttaagt--tgcatcc 1237822  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatga 280  Q
    | ||||||| | || |||||||| || ||  |||||| ||  |  ||||||||||||||| |||||||||||    
T  1237823 catgatgaattgcagcttctggtaatttttggcttctgataaacttgcttctgatgaactcgcttctgatga 1237894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 43644884 - 43645069
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||    
T  43644884 agcagagacacaaaccgagtagtggaggtagtggttgtacacttcgtacaattgtactttattaacgctcttcaaagaacaagcatccaatgccttcaaa 43644983  T
Q  110 -tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagcttt 196  Q
     ||||||  || ||| ||||  |||||||||   |||||||||||||| ||| || |||||||||  ||||||| |||||||||||||    
T  43644984 ttcattt-gaattagccgtttcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcatttgaacaacctttgaagcttt 43645069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 45538602 - 45538382
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||  ||  ||||| || ||| ||  |||||||||||||||||| |||||||    
T  45538602 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtgatttgtcaacgctctttgaagaacaagcatccaatgtcttcaaa 45538503  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||| || ||||||||||||||  ||||||||| || |||||||| |||| | |||||||| ||||||  | ||||     
T  45538502 tcctttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccattaaacaacttttgaagccttaagt--tgcatcc 45538405  T
Q  210 cctgatgaactacaacttctggt 232  Q
    | ||||||||| || ||||||||    
T  45538404 catgatgaactgcagcttctggt 45538382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 22663107 - 22663371
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||  |||||||||||||| ||||||||||||||||||||  ||||| ||| || |||  || ||||| |||||||||||| |||| ||||     
T  22663107 agagacaaaaatagagtagtggagatattggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatct 22663206  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    || ||||||||| |||| |  | | || ||||||||||||||  | ||||||| || ||||| || |||||| |||||||||||||||  | ||||||||    
T  22663207 ttccaaaatagttgttgctatatttttccagtcttctgcaatcttcagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcatctcct 22663304  T
Q  213 gatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgat 278  Q
     |||||||||||||||| || ||||||||||||| ||  |  |||||||||||||||||| ||||||    
T  22663305 aatgaactacaacttctagtgatcttcagcttctaataaacttgcttctgatgaacttgcatctgat 22663371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 18722798 - 18722602
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| | || ||| ||| || || ||||||| |||||||||||||  ||||||||    
T  18722798 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttcaaattctttcaaaa 18722699  T
Q  121 tagtcgttgtttcactctttcagtcttc-tgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatga 217  Q
    ||||||||| |||||||||   |||||| |||||||| ||| || |||||||||| |||||||| ||||||||| |||| || | ||||| |||||||    
T  18722698 tagtcgttgcttcactcttcttgtcttcttgcaatgc-tagccgtgattaaatcctttgaacagtctttgaagcattaactctttcatcttctgatga 18722602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 18731143 - 18730947
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| | || ||| ||| || || ||||||| |||||||||||||  ||||||||    
T  18731143 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttcaaattctttcaaaa 18731044  T
Q  121 tagtcgttgtttcactctttcagtcttc-tgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatga 217  Q
    ||||||||| |||||||||   |||||| |||||||| ||| || |||||||||| |||||||| ||||||||| |||| || | ||||| |||||||    
T  18731043 tagtcgttgcttcactcttcttgtcttcttgcaatgc-tagccgtgattaaatcctttgaacagtctttgaagcattaactctttcatcttctgatga 18730947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 198
Target Start/End: Complemental strand, 18685549 - 18685372
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| | || ||| ||| || || ||||||| |||||||||||||  ||||||||    
T  18685549 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttcaaattctttcaaaa 18685450  T
Q  121 tagtcgttgtttcactctttcagtcttc-tgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaa 198  Q
    |||| |||| |||||||||   |||||| |||||||| |||||| ||||| |||| |||||||| ||||||||| ||||    
T  18685449 tagttgttgcttcactcttctggtcttcttgcaatgc-tagacgtgattatatcctttgaacagtctttgaagcattaa 18685372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 6407714 - 6407924
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||| ||  ||||| ||| || ||| ||  |||||  ||||||||||||||||       
T  6407714 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtagaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttc--- 6407810  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
          |||||||| ||||||   ||| || |||||||||||||| |||||||||| || ||||| || |||||| |||||||||||||||  | |||||    
T  6407811 ------caaaatagccgttgtaatacttttccagtcttctgcaat-cttagacgagtttgaatcctttaaacagcttttgaagctttaagt--tgcatct 6407901  T
Q  210 cctgatgaactacaacttctggt 232  Q
    ||||||||||| || ||||||||    
T  6407902 cctgatgaactgcagcttctggt 6407924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 246
Target Start/End: Complemental strand, 24833204 - 24832985
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaaatcatttcaaaatagt 124  Q
    ||||| ||||| |||||||||||||||||||||||  ||||  ||| || ||| ||   | ||||||||||||||||| ||||||||  |||||| |||     
T  24833204 gagtaatggaggtagtggttgtacacttcgtacaaacgtaccatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcccttcaaagtagc 24833105  T
Q  125 cgttgtttcactctttcagtcttctgcaatgcttagacgagattaaat-ccattgaacagcctttgaagctttaagtcctacatctcctgatgaactaca 223  Q
    | ||| |||||| ||||||||||||||||| |||||||||| || ||| ||||| |||||| |||||||| ||||||  | ||||  |||||||||| ||    
T  24833104 cattgcttcact-tttcagtcttctgcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagt--tgcatcctctgatgaactgca 24833008  T
Q  224 acttctggttatcttcagcttct 246  Q
     |||||||| || || |||||||    
T  24833007 gcttctggtgatttttagcttct 24832985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 144 - 315
Target Start/End: Complemental strand, 3598375 - 3598206
Alignment:
Q  144 tcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagct 243  Q
    |||||||||||  ||||||||| || ||||  || |||| | |||||||||||||||  | |||||||||||||||||||||||||||| ||  ||||||    
T  3598375 tcttctgcaatctttagacgagtttgaatctgttaaacaacttttgaagctttaagt--tgcatctcctgatgaactacaacttctggtgattctcagct 3598278  T
Q  244 tcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||| ||| |  ||||| |||||| ||||||||||| ||||| ||||  |||||| ||| ||||||||||||||    
T  3598277 tctgatgaacttgcttatgatgaccttgcttctgacgacgtcatcacttcaggagcac-tttgtcttcaggag 3598206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 25164058 - 25164115
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtact 68  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25164058 agcagagacacaaattgagtagtggagatagtggttgtacacttcgtacaattgtact 25164115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 307 - 383
Target Start/End: Complemental strand, 18321058 - 18320982
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaac 383  Q
    ||||||||| ||| || ||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||||    
T  18321058 cttcaggagcacttctcttcagatgcttcaagcttcttttttgttgattccatagctatcttttgttcttccagaac 18320982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 315
Target Start/End: Original strand, 43639865 - 43640065
Alignment:
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||||||||||||   ||| || ||||||| ||||||  |||| |||| || ||||| |  |||| | |||||||||||||||  | |||||| |    
T  43639865 tttcaaaatagtcgttgtcatacttttccagtcttttgcaatttttaggcgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcat 43639962  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatgagat-gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttca 311  Q
    |||||||| || |||||||| ||   |||||||| ||||  | ||||||||||||||||||||||||||||| ||||  ||| || ||| ||||||||||    
T  43639963 gatgaactgcatcttctggtgatacacagcttctgatgattttgcttctgatgaacttgcttctgatgacgtcatcacttcatgagcac-tttgtcttca 43640061  T
Q  312 ggag 315  Q
    ||||    
T  43640062 ggag 43640065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 195
Target Start/End: Complemental strand, 22461783 - 22461617
Alignment:
Q  29 gtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtcgt 127  Q
    |||||||||||||||||||| |||| ||||||||||| |||| | ||  || | ||| ||| ||||||||||||||||||||||  ||  || |||||||    
T  22461783 gtagtggagatagtggttgtgcactccgtacaattgtcctttttcaactctctccaacgaataagcatccaatgccttcaaatccatttgaattagtcgt 22461684  T
Q  128 tgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctt 195  Q
    || |||| ||||  ||||||||||||||  ||  | ||||||||||| | ||||| ||||||||||||    
T  22461683 tgcttcattcttctagtcttctgcaatg-atatgctagattaaatccttcgaacaacctttgaagctt 22461617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 16207556 - 16207617
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||||    
T  16207556 ttcagatgcttcaagattcctttttgttgattcatttgctctcttttgttcttccagaacct 16207617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 14989614 - 14989518
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttc 106  Q
    |||||||||| |||| ||||||||||||||||||||||||| |||||||||  ||||| ||| || |||  || ||||| |||||||||||||||||    
T  14989614 agcagagacaaaaacagagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttc 14989518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 18151809 - 18151713
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttc 106  Q
    |||||||||| |||| ||||||||||||||||||||||||| |||||||||  ||||| ||| || |||  || ||||| |||||||||||||||||    
T  18151809 agcagagacaaaaacagagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaatgctctttgaagaataagcatccaatgccttc 18151713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 22461480 - 22461419
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| | ||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  22461480 ttcagacgtttcaagcttccttcttgttgattccattgctctcttttgttcttacagaacct 22461419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 19956502 - 19956375
Alignment:
Q  12 gcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaat 110  Q
    ||||||||| |||| | ||| ||||| ||||||||||||| || |||||||||| |||| | || ||| ||||| ||| ||| |||||||||||||||||    
T  19956502 gcagagaca-aaacagggtattggaggtagtggttgtacaattagtacaattgtcctttttcaacgctcttcaatgaaaaagtatccaatgccttcaaat 19956404  T
Q  111 catttcaaaatagtcgttgtttcactctt 139  Q
    | |||  || ||||||||| |||||||||    
T  19956403 cctttagaattagtcgttgcttcactctt 19956375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 22745754 - 22745832
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||| ||| ||| || ||||||  ||| |||||||||||||||||||||| || |||| |||||||||||||||||||    
T  22745754 cttcatgagcacttctcttcagacactttaagcttcctttttgttgattcctttgctcttttttgttcttccagaacct 22745832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 383
Target Start/End: Complemental strand, 19956256 - 19956142
Alignment:
Q  268 ttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattcc-attactctc 366  Q
    |||||||||||||||| ||||  |||||| |||||  |||||||| | | ||  | |||||| |||||||| |||||| ||||||||||| ||| |||||    
T  19956256 ttgcttctgatgacgtcatcacttcaggagcactt--gtcttcagaacatctttttttcagacgcttcaagtttccttcttgttgattccaattgctctc 19956159  T
Q  367 ttttgttcttccagaac 383  Q
     ||||||||||||||||    
T  19956158 atttgttcttccagaac 19956142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 45568059 - 45567945
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatt 114  Q
    ||||| |||| |||||||| || ||||||| ||||||||||||||   ||||||||| || ||| ||  ||| | || ||||||||||||||||||| ||    
T  45568059 agacataaacagagtagtgaaggtagtggtcgtacacttcgtacagaagtactttgtcaacgctctttgaaggataatcatccaatgccttcaaatcctt 45567960  T
Q  115 tcaaaatagtcgttg 129  Q
    ||||| ||| |||||    
T  45567959 tcaaattagccgttg 45567945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 357
Target Start/End: Original strand, 18719203 - 18719300
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgat 354  Q
    ||||||| ||| ||||||||||||||||| ||||  |||| |     |||| ||||||||| ||| || ||||||||||| |||||||||||||||||||    
T  18719203 gcttctggtgatcttgcttctgatgacgtcatcacttcagaac----tttgacttcaggagcact-ctcttcagatgcttaaagcttcctttttgttgat 18719297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 18772929 - 18772982
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    |||| |||||||||| ||||||||||| ||||||||| ||||| ||||||||||    
T  18772929 ttcaaatgcttcaagtttcctttttgtagattccattgctctcatttgttcttc 18772982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 379
Target Start/End: Complemental strand, 30421314 - 30421237
Alignment:
Q  302 tttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||||||||||||| | |  | |||||| |||| |||||||||||||||| ||||| || |||||| |||||||||||    
T  30421314 tttgtcttcaggagcagttttgttcagacgctttaagcttcctttttgttaattcctttgctctctattgttcttcca 30421237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 13430570 - 13430511
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||||||||||| || |  |||||| ||| ||||||||||||||    
T  13430570 gcttctgatgaacttgcttctgatgacgtcattacttcaggagcac-tttgtcttcaggag 13430511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 18151599 - 18151551
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 303  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||||||    
T  18151599 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 18151551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 21288611 - 21288670
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||||||||||| ||||  |||| | ||||||| ||||||||||    
T  21288611 gcttctgatgaacttgcttctgatgacgtcatcacttcagaagcactttt-tcttcaggag 21288670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 21541289 - 21541345
Alignment:
Q  324 ttcagatgcttcaagcttc-ctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||||| | ||||| ||||||||||||||| || ||||||||||||||||||    
T  21541289 ttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttcca 21541345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 315
Target Start/End: Original strand, 6407934 - 6407992
Alignment:
Q  256 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||||||||||||||||| ||||||||| ||||  |||||| ||| ||||||||||||||    
T  6407934 cttctgatgaacttgcttttgatgacgtcatcacttcaggagcac-tttgtcttcaggag 6407992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 18722475 - 18722420
Alignment:
Q  331 gcttcaagcttcctttttgttgattccattactc-tcttttgttcttccagaacct 385  Q
    ||||||||||| |||||||||||||||||| ||| |  ||||||||||||||||||    
T  18722475 gcttcaagctttctttttgttgattccattgctcttaatttgttcttccagaacct 18722420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 43639782 - 43639817
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgt 57  Q
    |||| |||||||||||||||||||||||||||||||    
T  43639782 aaacagagtagtggagatagtggttgtacacttcgt 43639817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 7018454 - 7018416
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacactt 54  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  7018454 agacacaaacagagtagtggaggtagtggttgtacactt 7018416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 13430791 - 13430741
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    ||||| |||| |||| ||||||||||  |||||||||||||||||||||||    
T  13430791 agcagggacaaaaacagagtagtggaagtagtggttgtacacttcgtacaa 13430741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 18685255 - 18685201
Alignment:
Q  331 gcttcaagcttcctttttgttgattccattactc-tcttttgttcttccagaacc 384  Q
    ||||||||||| |||||||||||||||||| ||| |  |||||||||||||||||    
T  18685255 gcttcaagctttctttttgttgattccattgctcttaatttgttcttccagaacc 18685201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 18730820 - 18730766
Alignment:
Q  331 gcttcaagcttcctttttgttgattccattactc-tcttttgttcttccagaacc 384  Q
    ||||||||||| |||||||||||||||||| ||| |  |||||||||||||||||    
T  18730820 gcttcaagctttctttttgttgattccattgctcttaatttgttcttccagaacc 18730766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 20259690 - 20259652
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacactt 54  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  20259690 agacacaaacagagtagtggaggtagtggttgtacactt 20259652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 21046320 - 21046282
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacactt 54  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  21046320 agacacaaacagagtagtggaggtagtggttgtacactt 21046282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 377
Target Start/End: Original strand, 23772679 - 23772721
Alignment:
Q  335 caagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||    
T  23772679 caagcttcctttttgtagattccattgctctcatttgttcttc 23772721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 385
Target Start/End: Original strand, 26833360 - 26833410
Alignment:
Q  335 caagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||| |||||||||| ||||| ||| ||||| ||||||||||||||||||    
T  26833360 caagcctcctttttgtagattctattgctctcatttgttcttccagaacct 26833410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 1745368 - 1745401
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatca 288  Q
    ||||||||||||||||||||||||||||| ||||    
T  1745368 gcttctgatgaacttgcttctgatgacgtcatca 1745401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 1237969 - 1238025
Alignment:
Q  324 ttcagatgcttcaagcttcc-tttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||||| |||||||| |||||||||||||| || |||| | |||||||||||    
T  1237969 ttcagatgctttaagcttccctttttgttgattcctttgctctttattgttcttcca 1238025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 24551521 - 24551580
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||| ||||||||| |||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  24551521 gcttatgatgaactcgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 24551580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 29379915 - 29379947
Alignment:
Q  347 ttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||||| |||||||||||||||||||||    
T  29379915 ttgttgattcctttactctcttttgttcttcca 29379947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 14 - 385
Target Start/End: Original strand, 15903196 - 15903568
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaa-gcatccaatgccttcaaatc 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| ||||| |||||| |||| |||||| ||||||||    
T  15903196 agagacacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaaagcatgcaatgctttcaaatc 15903295  T
Q  112 atttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcc 211  Q
     ||||||||||||||||| |||||||||  ||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||| | |||||||    
T  15903296 ctttcaaaatagtcgttgcttcactcttctagtcttctgtaatgcttagacgagattgaatccattgaacagcgtttgaagctttaagtcttgcatctcc 15903395  T
Q  212 tgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttca 311  Q
    |||| || |||| ||| |||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||  |||| | ||| |||| ||| |    
T  15903396 tgataaattacagcttttggtgatcttcagcttctgatgagatggttctgatgaacttgcttctgatgacgtcatcacttcagaagcac-tttgacttaa 15903494  T
Q  312 ggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15903495 ggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 15903568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 49642926 - 49642569
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| || || |||||| |||||||||||||||||    
T  49642926 agcagagacacaaactgagtagtggagatagtggttgtacactttgtacaattgtactttgtcaacgctcttaaaagaacaatcatccaatgccttcaaa 49642827  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | |||||    
T  49642826 tcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatctattgaacaacctttgaagctttaagtcttgcatct 49642727  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||  ||| ||||                  |||    
T  49642726 cctgatgaactacaacttctggtgatcttcagcttctaatgagatgcttctgatgaccttgcttctgattgcgtcatca------------------ctt 49642645  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49642644 caggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 49642569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 11 - 382
Target Start/End: Original strand, 31303381 - 31303755
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| ||||| |||||| |||| |||| |||||||    
T  31303381 agcagagacacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaaacatcaaatgtcttcaaa 31303480  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||    
T  31303481 tcctttcaaaatagttgttccttcactctttcagtcttctgcaatgcttagacgagattaaattcattgaacaacctttaaagctttaagtctttcatct 31303580  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttc---tgatgacgttatcagctcaggatcacttttgt 306  Q
    |||||  ||||| | |||||||| ||||||||||||| |||||||||||||||||||||||||||   ||||||||| ||||  |||||| ||| ||||     
T  31303581 cctgagtaactagagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgatgacgtcatcacttcaggagcac-tttga 31303679  T
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaa 382  Q
    ||||||||| ||| || ||||||||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  31303680 cttcaggagcacttctcttcagatgctttaagcttcctttttgttgattcttttgctctcttttgttcttccagaa 31303755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 14 - 385
Target Start/End: Original strand, 13948334 - 13948705
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatca 112  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||||||||||||||||     
T  13948334 agagacacaacctgagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 13948433  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| | ||||||||    
T  13948434 tttcaaaatagtcgttgcttcactattccagtcttctgcaatgcttagacgagattaaatcaattgaacatcctttgacgctttaagtcttgcatctcct 13948533  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcag 312  Q
    ||||| ||  | |||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||  ||| || || ||||| |||||     
T  13948534 gatgagctttagcttctggtgatcttcagcttctgatgagatgcttctgataaacttgcttctgatgacgtcatcacttcatgagca-ttttgacttcaa 13948632  T
Q  313 gagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| ||| || ||||||||||| |||||||||||||||||||||| || |||||||||||| |||||||||||    
T  13948633 gagcacttctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgtttttccagaacct 13948705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 14393168 - 14392796
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||| ||||||    
T  14393168 agcagagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaa 14393069  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |  ||||    
T  14393068 tcctttcaaaatagtcgttgtttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaaactttaagtcttgtatct 14392969  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||| ||||||| || ||||| || |||||  |||| | ||||||||||| |||||| ||||||||||||||||| ||||  |||||| ||| |||  |||    
T  14392968 cctaatgaacttcagcttctagtgatctt--gcttttgatgagatgcttatgatgatcttgcttctgatgacgtcatcacttcaggagcac-tttaactt 14392872  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || ||||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||    
T  14392871 caggagcacttctcttcagatgcttcaagcttcctttctgttgattccttagctctcttttgttcttccagaacct 14392796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 20646149 - 20646524
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||||||| ||||||    
T  20646149 agcagagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaa 20646248  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaa-gctttaagtcctacatc 208  Q
    || ||||||||||| ||||| |||||||||   ||||||| |||||||| |||||||| |||| ||||||||||||||| || |||||||||| | ||||    
T  20646249 tcctttcaaaatagacgttgcttcactcttctggtcttctacaatgcttggacgagatgaaatacattgaacagccttttaaagctttaagtcttgcatc 20646348  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||  ||| || ||| |||| ||    
T  20646349 tcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcatgaacac-tttgact 20646447  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||| ||| || |||| | |||| |||||||| ||||||||||||| || |||||||||||||||| |||||||    
T  20646448 tcaggagcacttctcttcaaacgctttaagcttccattttgttgattcctttgctctcttttgttcttctagaacct 20646524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 6090727 - 6091101
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||| || || |||||||||| |||||||||||||    
T  6090727 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaaagctttttaaagaacaagcattcaatgccttcaaa 6090826  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| |||  |||| |||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| | |||||    
T  6090827 tcctttcaaattagatgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgagcaacctttgaagttttaagtcttgcatct 6090926  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||| || |||||||| |||||| |||||| ||||||||||| |||||||||||||||||||||||| || |  ||| || ||| |||  |||    
T  6090927 cctgatgaacttcagcttctggtgatcttctgcttctgatgagatgcttttgatgaacttgcttctgatgacgtcataacttcatgagcac-tttaactt 6091025  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || ||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||    
T  6091026 caggagcacttctcttcagatgcttcaagcttcatttttgttgatttcattgctctcttttgttcttccagaacct 6091101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 385
Target Start/End: Original strand, 28582103 - 28582476
Alignment:
Q  13 cagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatc 111  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| || ||| ||  |||||||||||||||||||| | |||||    
T  28582103 cagagacaaaaactgagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaacaagcatccaatgccattaaatc 28582202  T
Q  112 atttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcc 211  Q
     ||||||||||||||||| ||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  28582203 ctttcaaaatagtcgttgcttcactcttccaatcttctgcaatgcatagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcc 28582302  T
Q  212 tgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttc 310  Q
    ||||||| || | |||||||| || |||||||||| ||| |  |||||||||||||||||||||||||||||| | ||  |||||| ||| |||||||||    
T  28582303 tgatgaaatagagcttctggtgattttcagcttctaatgtacttgcttctgatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtcttc 28582401  T
Q  311 aggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||| | | || |||||| | || |||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  28582402 aggagcagttctcttcagacgttttaagcttcctttttgttgatttctttactctctattgttcttccagaacct 28582476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 385
Target Start/End: Original strand, 52920403 - 52920774
Alignment:
Q  13 cagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatc 111  Q
    |||||||| |||| | ||||| ||| ||||||||||| ||||||||||||| || ||||| || ||| || || ||||||||||| |||||||||||||     
T  52920403 cagagacaaaaacagggtagtagaggtagtggttgtatacttcgtacaattttaatttgtcaacgctctttaaagaacaagcatcaaatgccttcaaata 52920502  T
Q  112 atttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcc 211  Q
     ||| ||| |||| |||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| | |||||||    
T  52920503 cttt-aaattagttgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgagcagcctttgaaactttaagtcttgcatctcc 52920601  T
Q  212 tgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttca 311  Q
    ||||||||| || |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||  |||||| |||||||  |||||    
T  52920602 tgatgaacttcagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttt-acttca 52920700  T
Q  312 ggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| ||| || |||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  52920701 ggagcacttctcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 52920774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 29951602 - 29951229
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||  || ||||| ||||||||||||||||||||||||    
T  29951602 agcagagactcaaactgagtggtggagatagtggttgtacactttgtacaattgtactttgttaactctcttcaaagaacaagcatccaatgccttcaaa 29951503  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| ||||||| |   ||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||   | |||    
T  29951502 tcctttcaaaatagttgttgcttcactcctctggtcttctacaatgcttagacgagattaaatccattgaaaaacctttgaagctttaagtctctcgtct 29951403  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
     |||||||||| || ||||| || ||||||||||||| || || |||||||||||||||||||||||| ||||| ||||  |||||| |||||  | |||    
T  29951402 tctgatgaacttcagcttctagtgatcttcagcttctgataaggtgcttctgatgaacttgcttctgaagacgtcatcacttcaggagcactt--gactt 29951305  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| || |||  | | |||||||||||||||||||||||||||| | | |  ||||||||||||||||||| ||||    
T  29951304 cagtagcactattctacagatgcttcaagcttcctttttgttgacttcttagctctcttttgttcttccaggacct 29951229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 30000756 - 30000383
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||  || ||||| ||||||||||||||||||||||||    
T  30000756 agcagagactcaaactgagtggtggagatagtggttgtacactttgtacaattgtactttgttaactctcttcaaagaacaagcatccaatgccttcaaa 30000657  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| ||||||| |   ||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||   | |||    
T  30000656 tcctttcaaaatagttgttgcttcactcctctggtcttctacaatgcttagacgagattaaatccattgaaaaacctttgaagctttaagtctctcgtct 30000557  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
     |||||||||| || ||||| || ||||||||||||| || || |||||||||||||||||||||||| ||||| ||||  |||||| |||||  | |||    
T  30000556 tctgatgaacttcagcttctagtgatcttcagcttctgataaggtgcttctgatgaacttgcttctgaagacgtcatcacttcaggagcactt--gactt 30000459  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| || |||  | | |||||||||||||||||||||||||||| | | |  ||||||||||||||||||| ||||    
T  30000458 cagtagcactattctacagatgcttcaagcttcctttttgttgacttcttagctctcttttgttcttccaggacct 30000383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 18121786 - 18121411
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  ||||| |||||| ||||||||| |||    
T  18121786 agcagagacaaacacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaaaagcattcaatgcctttaaa 18121687  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| ||||||||| ||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||| || | |||||    
T  18121686 tcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgctcaaacgagattgaatccattgaacaacctttgaagctttaaatcttgcatct 18121587  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    |||||||||||| | |||||||| ||||| ||||| | ||| |  ||||| ||||||||||||||||||||| || | ||  |||||| ||| |||||||    
T  18121586 cctgatgaactagagcttctggtgatctttagcttatgatgaacttgcttttgatgaacttgcttctgatgatgtcaccacgtcaggagcac-tttgtct 18121488  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||| | | || |||||| |||| ||||||| ||||||||| |||  || |||||| |||||||||||||||||    
T  18121487 tcaggagcagttctcttcagacgctttaagcttcatttttgttgcttcatttgctctctattgttcttccagaacct 18121411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 37467328 - 37467556
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  37467328 agcagagacacaaactgggtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 37467427  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||  |||||||| |||||||  | |||||    
T  37467428 tcctttcaaaatagtcgttgcttcactcttccagtcttctacaatgcttagatgagattaaatccattgaacaagctttgaagatttaagttttgcatct 37467527  T
Q  210 cctgatgaactacaacttctggttatctt 238  Q
    |||||||||||||  |||||||| |||||    
T  37467528 cctgatgaactactgcttctggtgatctt 37467556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 12963249 - 12962891
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||  || ||||| ||||||||||||||||| ||||||    
T  12963249 agcagagacacatactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacactcttcaaagaacaagcatccaatgctttcaaa 12963150  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
     | ||  |||||||| |||| ||||||||  |||||||||||| ||||||||| ||||||||||| ||||||| || ||||||||||||||| | |||||    
T  12963149 accttctaaaatagttgttgcttcactctcccagtcttctgcattgcttagacaagattaaatcccttgaacaacccttgaagctttaagtcttgcatct 12963050  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||||||||||||||| ||||                |||||||||||||||||||||||||||||| ||||  ||| || ||| |||| |||    
T  12963049 cctgatgaactacaacttctggtgatct----------------tgcttctgatgaacttgcttctgatgacgtcatcacttcaagagcac-tttgactt 12962967  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattact-ctcttttgttcttccagaacct 385  Q
    ||  || ||| || |||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  12962966 caatagcacttctcttcagacgcttcaagcttcctttttgttgattcc-ttagtcctcttttgttcttccagaacct 12962891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 30 - 385
Target Start/End: Original strand, 14969341 - 14969683
Alignment:
Q  30 tagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgtt 128  Q
    ||||||||||||||||||||||||||||| || |||||||||| || ||| ||  ||||| |||||||||||||| ||||||| |||||||||||| |||    
T  14969341 tagtggagatagtggttgtacacttcgtaaaaatgtactttgtcaacgctatttgaagaataagcatccaatgccatcaaatcctttcaaaatagttgtt 14969440  T
Q  129 gtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttc 228  Q
    | || |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| |||| |||||||| | ||||    
T  14969441 gctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatatcctcatgaactagagcttc 14969540  T
Q  229 tggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcag 328  Q
    |||| |||||||              || |||||||||||||||| ||||||||| ||||  |||||| |||||||||||| |||||   | || |||||    
T  14969541 tggtgatcttca--------------gcatctgatgaacttgcttatgatgacgtcatcacttcaggagcacttttgtcttaaggagcgattctcttcag 14969626  T
Q  329 atgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||| |||||||||||||||||  || ||||| |||||||||||| |||||    
T  14969627 atgcttcaagattcctttttgttgattcatttgctctcgtttgttcttccataacct 14969683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 41494994 - 41495179
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  41494994 agcagatacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 41495093  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctt 195  Q
    || ||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41495094 tcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgtttagacgagattaaatccattgaacagcctttgaagctt 41495179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 11 - 356
Target Start/End: Original strand, 2561183 - 2561514
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||| ||||||||||| || | | ||  |||||||||||||||||  |||||||    
T  2561183 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacacttgtactttgtcaacgatctttgaagaacaagcatccaatttcttcaaa 2561282  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  2561283 tcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 2561382  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||| | |||||||| ||  |||              |||||||||||||||||||||||||| || | ||  ||| || ||| ||||||||    
T  2561383 cctgatgaactagagcttctggtgattctca--------------gcttctgatgaacttgcttctgatgatgtcaccacttcaagagcac-tttgtctt 2561467  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattc 356  Q
    |||||| | | || |||||| |||| |||||||||||||||||||||    
T  2561468 caggagcagttctcttcagacgctttaagcttcctttttgttgattc 2561514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 17239083 - 17238858
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatca 112  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| |||||| |||||||||| ||||||||     
T  17239083 agagatacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaatcatccaatgctttcaaatcc 17238984  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    |||||||||||||| || |||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  17238983 tttcaaaatagtcgatgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgatcagcctttgaagctttaagtcttgcatctcct 17238884  T
Q  213 gatgaactacaacttctggttatctt 238  Q
     ||| ||| || |||||||| |||||    
T  17238883 tatgcacttcatcttctggtgatctt 17238858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 13780748 - 13780576
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaag-aacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| |||||  |||||||||||||||||||||||    
T  13780748 agcagagacacaaactgagtcgtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaataacaagcatccaatgccttcaaa 13780649  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaaca 182  Q
    || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13780648 tcctttcaaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattgaaca 13780576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 47207701 - 47207941
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  47207701 agcaaagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 47207800  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgc-ttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    |||||||||| ||| ||||| |||||| || |||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||  | ||||    
T  47207801 tcatttcaaactagccgttgcttcacttttccagtcttctgcaatgctttagacgagattaaatccattgaacaacctttgaagttttatgt--tgcatc 47207898  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    |||||||||||| || |||||||| || |||||||||| ||||    
T  47207899 tcctgatgaactgcagcttctggtgattttcagcttctgatga 47207941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 49553653 - 49553400
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgt-tcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||| || ||| | | |||||||| |||||||||||||||||    
T  49553653 agcagagacaaaaatagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctctgaagaacaaacatccaatgccttcaaa 49553554  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||||  || |||||||||||| |||||||||||||||||||||  ||||||| ||| ||||||||||||| ||||||||| | |||||    
T  49553553 tcctttcaaaatagtcactgcttcactctttcaatcttctgcaatgcttagacgatgttaaatctattaaacagcctttgaaactttaagtcttgcatct 49553454  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatga 265  Q
    ||||||||||| |  |||||||| |||||   ||||| ||||||||||||| ||||    
T  49553453 cctgatgaacttcggcttctggtgatctt--acttctgatgagatgcttctaatga 49553400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 11 - 379
Target Start/End: Original strand, 11223559 - 11223910
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||   |||||||| || ||| ||  ||||||||||||||||||||||||||    
T  11223559 agcagagaca-aaacagagtagtggagatagtggttgtacacttcgtacaaacatactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 11223657  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||| || |||||||||||| |||||||||  ||||  |  ||||    
T  11223658 tcctttcaaaatagtcgttgcttcactttttcagtcttctgcaatgcatagacgagattgaacccattgaacagcttttgaagctcaaagt--tgtatct 11223755  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||| |  |||||||| || ||||              | ||||||||||||||||||||||||||| | ||  |||||| ||| ||||||||    
T  11223756 cctgatgaactgctgcttctggtgattttca--------------gattctgatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctt 11223840  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||||| | | || ||||||||||| || ||||||||||||||||||| || |||| | || ||||||||    
T  11223841 caggagcagttctcttcagatgctttaaacttcctttttgttgattcctttgctctttattattcttcca 11223910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 40799869 - 40800108
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  ||||||||| ||||||| ||||||||    
T  40799869 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagtatccaattccttcaaa 40799968  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |  ||||||| ||||||||| ||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  | |||||    
T  40799969 tactttcaaactagtcgttgcttcgcttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagcttta--tgatgcatct 40800066  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    | ||||||||| || |||||||| || |||||||||| ||||    
T  40800067 cttgatgaactgcagcttctggtgattttcagcttctgatga 40800108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 16658782 - 16658541
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | ||| || ||| ||||| ||| ||||||||||||| ||||||    
T  16658782 agcagagacacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaataagcatccaatgctttcaaa 16658683  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||  |   ||||| || ||||||| ||||||||| |||| |||||||| ||||||||| || ||||| | |||||    
T  16658682 tcctttcaaaatagtcgttgcttcactgctctggtcttttgtaatgcttggacgagattgaatcaattgaacaacctttgaagtttcaagtcttgcatct 16658583  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  16658582 cctgatgaactacaacttctggtgatcttcagcttctgatga 16658541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 27 - 251
Target Start/End: Complemental strand, 38177791 - 38177566
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtc 125  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| || ||| || || |||||||||||||||||||||||||| ||||||||||||     
T  38177791 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttaaagaacaagcatccaatgccttcaaatcctttcaaaatagtt 38177692  T
Q  126 gttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaac 225  Q
    |||| ||||||||| || ||||||||| |||| |||||||||||||| ||||||||| |||||||||||||||||| | |||||||| || ||||| | |    
T  38177691 gttgcttcactcttccaatcttctgcattgctcagacgagattaaattcattgaacaacctttgaagctttaagtcttgcatctcctaataaactagagc 38177592  T
Q  226 ttctggttatcttcagcttcttatga 251  Q
    ||||| | |||||| |||||| ||||    
T  38177591 ttctgatgatcttctgcttctgatga 38177566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 12726394 - 12726166
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||| ||||||||||||||||||||  || || || ||  ||||||||||||| ||||||    
T  12726394 agcagagacaaaaacagagtagtggaggtagtggttgtacactttgtacaattgtactttgttaactctctttaaagagtaagcatccaatgctttcaaa 12726295  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||  |||||||||  |||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| |  ||||    
T  12726294 tcctttcaaaatagtcgttacttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaatagcctttgaagctttaagtcttgaatct 12726195  T
Q  210 cctgatgaactacaacttctggttatctt 238  Q
    ||||||||||| |||||||| || |||||    
T  12726194 cctgatgaacttcaacttcttgtgatctt 12726166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 28 - 315
Target Start/End: Complemental strand, 46349991 - 46349705
Alignment:
Q  28 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgt-tcaagaacaagcatccaatgccttcaaatcatttcaaaatagtcg 126  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||| || | | | | |||||||||||||||||||||||||||| ||||||| ||||||    
T  46349991 agtagtggaggcagtggttgtacacttcgtacaatcgtactttgtcaatgttctctgaagaacaagcatccaatgccttcaaatcctttcaaattagtcg 46349892  T
Q  127 ttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaact 226  Q
    ||| |||||| || ||||||||||||||||||||||||||||  ||| |||||||| | |||||||  ||||||  | | |||||||||||||| |||||    
T  46349891 ttgcttcacttttccagtcttctgcaatgcttagacgagattggatcaattgaacaacttttgaagtcttaagt--tgcttctcctgatgaactgcaact 46349794  T
Q  227 tctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||||| || |||||||||| ||| |  ||||||||||||||| |||||||||||||| | ||  |||||| ||| ||||||||||||||    
T  46349793 tctggtgattttcagcttctaatgaacttgcttctgatgaactcgcttctgatgacgtcaccacttcaggagcac-tttgtcttcaggag 46349705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 47405585 - 47405346
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||| ||  || ||  |||||||| |||| ||||||||||||    
T  47405585 agcagagacaaaaacatagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctttgaagaacaaacatcaaatgccttcaaa 47405486  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| |||| |||| |||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | |||||    
T  47405485 tcctttcaaactagttgttgcttcatttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttatgt--tgcatct 47405388  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    | ||||||||| || |||||||| || |||||||||| ||||    
T  47405387 cgtgatgaactgcagcttctggtgattttcagcttctgatga 47405346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 18142916 - 18142696
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  ||||| |||||| ||||||||| |||    
T  18142916 agcagagacaaacacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaaaagcattcaatgcctttaaa 18142817  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| ||||||||| ||||||||||||||||| | |||||||| ||||||||||| ||||||||||||||||| || | |||||    
T  18142816 tcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgctcaaacgagattgaatccattgaatagcctttgaagctttaaatcttgcatct 18142717  T
Q  210 cctgatgaactacaacttctg 230  Q
    |||||||||||| | ||||||    
T  18142716 cctgatgaactagagcttctg 18142696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 39 - 201
Target Start/End: Original strand, 13824092 - 13824255
Alignment:
Q  39 tagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactc 137  Q
    |||||||||||||||||||||||||||||||||| || ||| ||  |||||||| |||||||||||||||||||||||||||||||| |||| |||||||    
T  13824092 tagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcatttcaaaatagttgttgcttcactc 13824191  T
Q  138 tttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc 201  Q
    || ||||||||| || || |||||||||||||||||||||||||| ||||||||||||||||||    
T  13824192 ttccagtcttcttcattgtttagacgagattaaatccattgaacaacctttgaagctttaagtc 13824255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 25398419 - 25398098
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||| || ||| ||  |||| |||  || |||||||||||||    
T  25398419 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtgctttgtcaacgctctttgaagagcaaatatgcaatgccttcaaa 25398320  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||| | |||                  |||||||||||||| ||||||||| |||||||||||||||||| | |||||    
T  25398319 tcctttcaaaatagtcgttgcttcattgttt------------------agacgagattaaattcattgaacaacctttgaagctttaagtcttgcatct 25398238  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
      ||||||   |||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||  |||  |||||| ||||| | ||||    
T  25398237 tatgatgag--acaacttctgatgatcttcagcttctaatgagatgcttctgatgaacttgcttctgatgacgtcgtcacttcaggagcacttgtatctt 25398140  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgtt 351  Q
    ||||||  || || |||| ||||||||||||| |||||||||    
T  25398139 caggagcgcttctcttcaaatgcttcaagctttctttttgtt 25398098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 22 - 281
Target Start/End: Original strand, 14955433 - 14955692
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||  ||||| |||||||||||||||||||||  ||||||||    
T  14955433 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatactttcaaaa 14955532  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaact 220  Q
    |||| |||| || ||  || ||||||||||||||  ||||||||| || |||||||| |||||| ||||||||||| |||  ||||||||||||||||||    
T  14955533 tagttgttgctttacctttccagtcttctgcaatctttagacgagtttgaatccattaaacagcttttgaagctttgagt--tacatctcctgatgaact 14955630  T
Q  221 acaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgac 281  Q
     ||||||||||| ||  ||||||||| ||  |  ||||||||||||||||||||||||||||    
T  14955631 gcaacttctggtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatgac 14955692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 27 - 281
Target Start/End: Original strand, 2785075 - 2785330
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaaatcatttcaaaatagt 124  Q
    ||||||||||| |||||||||||||||||||||||  ||||| ||| || ||| ||   | ||||||||||||||||| |||||||| ||||||||||||    
T  2785075 gagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagt 2785174  T
Q  125 cgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaa 224  Q
     |||| |||||| || ||||||||||||||  ||||||||| || ||||| || |||| | |||||||||||||||  | ||||||||||||||||||||    
T  2785175 tgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaagt--tgcatctcctgatgaactacaa 2785272  T
Q  225 cttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgac 281  Q
    |||||||| ||  ||||||||| ||  |  ||||||||||||||||||||||||||||    
T  2785273 cttctggtgattctcagcttctaataaacttgcttctgatgaacttgcttctgatgac 2785330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 19889107 - 19888898
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| | ||| ||  || ||||| ||||||||||||||||| ||||||    
T  19889107 agcagagacacaaactgag--gtggagatagtggttgtacacttcgtacaattgtaatatgtcaatcctattcaaagaacaagcatccaatgctttcaaa 19889010  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag-cctttgaagctttaagtcctacatc 208  Q
    || ||||||||||||||||| ||||||| |   ||||| |||||||||| ||||||||| |||||||||||||| | ||| |||||||||||| | ||||    
T  19889009 tcctttcaaaatagtcgttgcttcactcatctggtcttttgcaatgcttggacgagattgaatccattgaacagtctttttaagctttaagtcttgcatc 19888910  T
Q  209 tcctgatgaact 220  Q
    || |||||||||    
T  19888909 tcttgatgaact 19888898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 20627595 - 20627356
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||| | ||||  |||||||||| |||||||||||||||||||||||  ||||||||| || |||  || |  |||||||||||||||||||||||    
T  20627595 agcagagataaaaacaaagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgataaacaagcatccaatgccttcaaa 20627496  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    ||  ||||||||||| |||| |||||| || ||||||||||||||  ||||||||| || |||||||| |||| | |||||||||||||||  | |||||    
T  20627495 tccattcaaaatagttgttgcttcacttttccagtcttctgcaatcattagacgagtttgaatccattaaacatcttttgaagctttaagt--tgcatct 20627398  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||||||||| ||||||||||| || |||||||||| ||||    
T  20627397 cctgatgaactgcaacttctggtgattttcagcttctgatga 20627356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 379
Target Start/End: Complemental strand, 53056891 - 53056523
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  53056891 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaa 53056792  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| || ||||||||||||||  ||||||||  || |||||||| |||||| |||||| | ||||||  | ||||     
T  53056791 tcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgatgttgaatccattaaacagcttttgaaaccttaagt--tgcatcc 53056694  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    | ||||||||| || ||||| || || ||  |||||| ||  |  || || |||||||||  ||||||||||||| | ||  |||||| ||| |||||||    
T  53056693 catgatgaactgcagcttctagtgatttttggcttctgataaacttgtttttgatgaactaacttctgatgacgtcaccacttcaggagcac-tttgtct 53056595  T
Q  309 tcaggagaactgctattcagatgcttcaagctt-cctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||| | |  | |||| | |||| |||||| |||||||||||||||| || || | | |||||||||||    
T  53056594 tcaggagcagttttcttcaaacgctttaagcttccctttttgttgattcctttgctttttattgttcttcca 53056523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 16032520 - 16032710
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||| ||||||||||||||||||||||||||    
T  16032520 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaagcatccaatgccttcaaa 16032619  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc 201  Q
    || ||||||||||||||||| | ||||||    |||||||||| ||  ||| |  |||||||||| ||||||| ||||||||||||||||||    
T  16032620 tcctttcaaaatagtcgttgatacactctcctggtcttctgcagtg-ataggcatgattaaatcctttgaacaacctttgaagctttaagtc 16032710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 24775698 - 24775490
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||||||  ||||||||| |||||| ||  ||||| |||||| |||||||||||||    
T  24775698 agcagagacaaaaacagagtagtggatgtagtggttgtacacttcgtacaaacgtactttgtcaaagctctttgaagaataagcattcaatgccttcaaa 24775599  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||| || ||||||||||||||  ||||||||| || ||||| || |||||| |||||||||||||||  | |||||    
T  24775598 tcctttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcatct 24775501  T
Q  210 cctgatgaact 220  Q
    |||||||||||    
T  24775500 cctgatgaact 24775490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 220 - 385
Target Start/End: Original strand, 41495179 - 41495343
Alignment:
Q  220 tacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaact 319  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| | ||||  ||| || |||||| | |||||| || |||    
T  41495179 tacaacttctggtgatcttcagtttctgatgagatgcttctgatgaacttgcttctgatgacatcatcacttcatgagcacttt-gacttcagaagcact 41495277  T
Q  320 gctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
     || ||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  41495278 tctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 41495343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 281
Target Start/End: Original strand, 20725093 - 20725350
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaag-aacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| ||||||||||||||||  ||||||||||||||||||||| |||| | || ||| |||||| ||||||||||||||| ||||||||| |||  ||     
T  20725093 aaacagagtagtggagatagttattgtacacttcgtacaattgtcctttttcaacgctcttcaagaaacaagcatccaatgtcttcaaatccttttgaat 20725192  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaact 220  Q
    ||||||||| |||||||||   |||||||||||||| |||||| ||||| |||  ||||||||||||||||||||||| ||   || ||  |||||| ||    
T  20725193 tagtcgttgcttcactcttctggtcttctgcaatgc-tagacgtgattagatcttttgaacagcctttgaagctttaattctctcagcttatgatgatct 20725291  T
Q  221 acaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgac 281  Q
     || |||||||| || ||   ||| | ||||| ||||| ||||||||||||||||||||||    
T  20725292 tcagcttctggtgatgtt--tcttttgatgaggtgcttatgatgaacttgcttctgatgac 20725350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 22804187 - 22804058
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || ||| ||| |||||||| |||| |||||||||||     
T  22804187 agcagagacacaaattgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagaacaatcatcgaatgccttcaag 22804088  T
Q  110 tcatttcaaaatagtcgttgtttcactctt 139  Q
    || ||||||||||| ||||| |||||||||    
T  22804087 tcctttcaaaatagccgttgcttcactctt 22804058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 248 - 385
Target Start/End: Original strand, 13824265 - 13824403
Alignment:
Q  248 atgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgc--ttcaagcttcctt 345  Q
    |||||||||||||||||||||||||||||||||||| ||||  |||||| |||||||  ||||||||| ||| || |||||  ||  |||||||||||||    
T  13824265 atgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttta-cttcaggagcacttctcttcaggagcacttcaagcttcctt 13824363  T
Q  346 tttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  13824364 tttgttgattccattgctctcttttgttcttccagaacct 13824403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 5213583 - 5213789
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaacaagcatccaatgccttcaaatcatttcaaaat 121  Q
    |||| ||||||||||| |||||||||||||||||||||||  |||||  || || ||| || || || ||||||| |||||||||||||| || ||||||    
T  5213583 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactacgtcaacgcttttgaataataagcatctaatgccttcaaatccttccaaaat 5213682  T
Q  122 agtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaacta 221  Q
    ||| |||| |  ||| || ||||||||||||||  ||| ||||| || ||||| || |||||| |||||||||||||||  | |||||||||||||||||    
T  5213683 agttgttgctatacttttccagtcttctgcaatctttatacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcatctcctgatgaacta 5213780  T
Q  222 caacttctg 230  Q
    || ||||||    
T  5213781 cagcttctg 5213789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 27 - 277
Target Start/End: Original strand, 33583240 - 33583492
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaaatcatttcaaaatagt 124  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||| || ||| ||   | ||||||||||||||||| |||||||| |||||||||||     
T  33583240 gagtattggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagc 33583339  T
Q  125 cgttgtttcactctttcagtcttctgcaatgcttagacgagattaaat-ccattgaacagcctttgaagctttaagtcctacatctcctgatgaactaca 223  Q
    ||||| |||||| || ||||||||| |||| ||||||| || || ||| ||||  |||| | |||||||| ||||||  | ||||  |||||||||||||    
T  33583340 cgttgcttcacttttccagtcttctacaatccttagacaaggttgaatcccataaaacaacttttgaagccttaagt--tgcatcctctgatgaactaca 33583437  T
Q  224 acttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctga 277  Q
    |||| |||| || || ||||||| || ||  ||||||||||||||| ||||||||    
T  33583438 acttttggtgatttttagcttctgatagacttgcttctgatgaactcgcttctga 33583492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 22140759 - 22140967
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||| |||||||||||||   ||||| ||| || ||| ||  ||||||||||||||||||  ||||||    
T  22140759 agcagagacaaaaacagagtagtggaggtagtggttatacacttcgtacatacgtactatgtcaacgctctttgaagaacaagcatccaatgttttcaaa 22140858  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
     |  |||||||||||||||| ||||||  |  ||||||||||||| ||||| |||| || ||||| ||||||||| |||||| ||||||||  | |||||    
T  22140859 acccttcaaaatagtcgttggttcacttatctagtcttctgcaatccttaggcgagtttgaatccgttgaacagcttttgaaactttaagt--tgcatct 22140956  T
Q  210 cctgatgaact 220  Q
    |||||||||||    
T  22140957 cctgatgaact 22140967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 29855404 - 29855587
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagc-tgttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||| | |||| ||||||||||| |||||||||||||||||||||||  ||||| ||| || || | || ||||||||||||||||||||||||||    
T  29855404 agcagagataaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactctgtcaacgctttttgaagaacaagcatccaatgccttcaaa 29855503  T
Q  110 tcatttcaaaatagtcgttgtttcac-tctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaag 192  Q
    |  ||||||| ||| ||||| ||||| | ||| |||||||||||||  ||||||||| || |||||||| |||||| |||||||    
T  29855504 ttctttcaaactagccgttgcttcactttttttagtcttctgcaatctttagacgaggttgaatccattaaacagcttttgaag 29855587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 236 - 385
Target Start/End: Complemental strand, 22804038 - 22803891
Alignment:
Q  236 cttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttc 335  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||| ||||  | |||| |||||    ||||||||| ||| || |||| ||| |||    
T  22804038 cttcagcttctgatgagatgcttctgaggaacttgcttttgatgacgtcatcactttaggagcacttaa--cttcaggagcacttctcttcaaatgtttc 22803941  T
Q  336 aagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  22803940 aagcttcctttttgttgattccattgctctcttttgttcttctagaacct 22803891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 241 - 385
Target Start/End: Complemental strand, 16199744 - 16199602
Alignment:
Q  241 gcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagct 340  Q
    |||||| ||||| ||||||| |||||||||||||||||||||| ||||| |||||| |||||  | ||||||||| |||  | |||||||||||||||||    
T  16199744 gcttctgatgaggtgcttcttatgaacttgcttctgatgacgtcatcagttcaggagcactt--gacttcaggagcacttttcttcagatgcttcaagct 16199647  T
Q  341 tcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    || || |||||||||||||| ||||| ||||||| ||||||||||    
T  16199646 tctttcttgttgattccattgctctcatttgttcctccagaacct 16199602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 84 - 265
Target Start/End: Original strand, 11869137 - 11869317
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||| |||||| || |||||||||| | | ||||||||||||| ||| |||| ||||     
T  11869137 aagaacaagcatccaatgccttcaaatcctttcaaactagacgttgcttcacttttccagtcttctgtatttcttagacgagattgaattcattaaacaa 11869236  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgaga-tgcttctgatga 265  Q
      |||||||| ||||||  | |||| ||||||||||| || |||||||| || |||||||||| |||| | ||||||||||||    
T  11869237 attttgaagccttaagt--tgcatcccctgatgaactgcagcttctggtgattttcagcttctgatgaaattgcttctgatga 11869317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 12389035 - 12388846
Alignment:
Q  12 gcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaat 110  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| |||||  || ||| ||| ||||| |||||||||||||||| ||||    
T  12389035 gcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtcctttgccaacgctcttcaaagaagaagcatccaatgccttaaaat 12388936  T
Q  111 catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc 201  Q
      |||  || ||||||| | |||||| ||    ||||||||||| | |||||  |||||||||| ||||||| ||||||||||||||||||    
T  12388935 tcttttgaattagtcgtagcttcactgttctgatcttctgcaattc-tagacatgattaaatcctttgaacaacctttgaagctttaagtc 12388846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 108 - 315
Target Start/End: Complemental strand, 49666480 - 49666276
Alignment:
Q  108 aatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacat 207  Q
    |||| |||||||||||||||||||  ||| || |||||||||||||| |||||||||| || ||||| |  |||| | |||||||||||||||  | |||    
T  49666480 aatcctttcaaaatagtcgttgttatacttttccagtcttctgcaat-cttagacgagtttgaatccttgaaacaacttttgaagctttaagt--tgcat 49666384  T
Q  208 ctcctgatgaactacaacttctggttatcttcagcttcttatgaga-tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgt 306  Q
    ||||||||||||| || |||||||| ||   || ||| | |||| | |||||||||||||||||||||||||||||| ||||  |||||| ||| |||||    
T  49666383 ctcctgatgaactgcagcttctggtgattcacaacttatgatgaaattgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgt 49666285  T
Q  307 cttcaggag 315  Q
    |||||||||    
T  49666284 cttcaggag 49666276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 254 - 385
Target Start/End: Original strand, 37467541 - 37467671
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttga 353  Q
    |||||||| ||| ||||||||||||||||| ||||  |||||| | |||| | ||||||||| |||  | ||||||||||||||||||||||||||||||    
T  37467541 tgcttctggtgatcttgcttctgatgacgtcatcacttcaggagctcttt-gacttcaggagcacttatcttcagatgcttcaagcttcctttttgttga 37467639  T
Q  354 ttccattactctcttttgttcttccagaacct 385  Q
    |||||||  |||||||||||||| ||||||||    
T  37467640 ttccattgttctcttttgttctttcagaacct 37467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 29 - 385
Target Start/End: Complemental strand, 19249558 - 19249203
Alignment:
Q  29 gtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgt 127  Q
    |||||||||  |||||||||||||||||||||||||| || | | |  ||| ||| |||||||| ||||||||||||||||||| |||  || |||  ||    
T  19249558 gtagtggagtaagtggttgtacacttcgtacaattgtcctatttcagcgctcttcaaagaacaaacatccaatgccttcaaatccttttgaattagctgt 19249459  T
Q  128 tgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaactt 227  Q
    || |||||||||   |||||||||||||| ||| || |||||||||  ||||||| ||||||||||||||||||   ||||| || |||| || || ||     
T  19249458 tgcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcgtttgaacaacctttgaagctttaagtctctcatcttctaatgatcttcagctc 19249360  T
Q  228 ctggttatcttcagcttcttatga-gatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattc 326  Q
    ||| | |    | ||||||  ||| | ||||||||||| |  ||||||||||||||| ||||  |||||| || |||   |||||| |  |||  | |||    
T  19249359 ctgatgaaaaactgcttctagtgatgttgcttctgatg-aggtgcttctgatgacgtcatcacttcaggagca-tttgaacttcagaaccacttttcttc 19249262  T
Q  327 agatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||    
T  19249261 agatgcttcaagcttcattcttgttgattccagtgctctcatttgttcttccagaacct 19249203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 280
Target Start/End: Original strand, 21640865 - 21641130
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||  |||||||||||||||||||||||||||||||| ||  ||||| ||| || ||| ||  || || ||||||||||||| ||  ||||     
T  21640865 agagacaaaaatagagtagtggagatagtggttgtacacttcgtaaaaacgtactatgtcaacgctctttgaaaaataagcatccaatgcttttcaatcc 21640964  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    || |||||||| ||||| |  ||| || ||||||||| |||| ||||| |||| || ||||| |  |||||| ||||| |||||||||  | ||||||||    
T  21640965 ttccaaaatagccgttgctatacttttccagtcttctacaat-cttaggcgagtttgaatccttgaaacagcttttgaggctttaagt--tgcatctcct 21641061  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatga 280  Q
    |||||||| ||||||||||| ||   |||||||| ||| |  ||||| || ||||||||||||||||||    
T  21641062 gatgaactgcaacttctggtgattcacagcttctgatgaacttgcttatgctgaacttgcttctgatga 21641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 288
Target Start/End: Complemental strand, 21605818 - 21605550
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||  ||| | ||| || |||  || ||||| ||||||||||||            
T  21605818 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatg-------- 21605727  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
     ||||||||||||||||||||   ||| || ||||||||||||||   ||| |||| |  | ||| |  |||| | |||||||||||||||  | |||||    
T  21605726 -catttcaaaatagtcgttgtcatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaagctttaagt--tccatct 21605630  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatca 288  Q
    ||||||||||| ||||||||||| ||   || ||||| ||| |  ||||| |||||| ||||||||||||||||| ||||    
T  21605629 cctgatgaactgcaacttctggtgatacacaacttctgatgaacttgcttatgatgaccttgcttctgatgacgtcatca 21605550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 303
Target Start/End: Complemental strand, 21636834 - 21636551
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||||||  ||||| ||| || ||| ||  ||||| |||||||||||||           
T  21636834 agcagagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc------- 21636742  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
      ||||||||||||||||||    ||| || ||||||||||||||   ||| |||| |  | ||| |  |||||| ||||||||||||||| |  || ||    
T  21636741 --atttcaaaatagtcgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacagcttttgaagctttaagttc--caact 21636646  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagat-gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 303  Q
    ||||||||||| | ||||||||| ||   |||||||| ||||  | ||||||||||| ||||||||||||||||| ||||  |||||| ||||||    
T  21636645 cctgatgaactgccacttctggtgatacacagcttctgatgaacttgcttctgatgaccttgcttctgatgacgtcatcacttcaggagcacttt 21636551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 23538312 - 23538185
Alignment:
Q  29 gtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgt-tcaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgt 127  Q
    ||||||||||||||||||||||||||||||||||||| |||| | || | | | | ||||| |||||| ||||||||||||||  |||  |||||  |||    
T  23538312 gtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacgttctctaaagaataagcattcaatgccttcaaattcttttgaaataaccgt 23538213  T
Q  128 tgtttcactctttcagtcttctgcaatg 155  Q
    ||||||| |||| |||||||||||||||    
T  23538212 tgtttcattcttccagtcttctgcaatg 23538185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 379
Target Start/End: Complemental strand, 47405356 - 47405247
Alignment:
Q  270 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttt 369  Q
    |||||||||||||| || |  |||||| |||||||||||||||||| | |  | |||||| |||| |||||||||||||||||||||| || |||||| |    
T  47405356 gcttctgatgacgtcattacttcaggagcacttttgtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcctttgctctctat 47405257  T
Q  370 tgttcttcca 379  Q
    ||||||||||    
T  47405256 tgttcttcca 47405247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 16032771 - 16032849
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||| |||  | ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| ||||||    
T  16032771 cttcaggagcacttttcttcagatgcttcaagcttcatttttgttgattccaatgctctcttttgttcttccggaacct 16032849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 385
Target Start/End: Complemental strand, 17238871 - 17238744
Alignment:
Q  256 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgatt 355  Q
    |||||| ||| ||||||||||||||||| ||||  |||| | |||||  | ||||||||| ||| || |||||| |||| ||||||||||||||||||||    
T  17238871 cttctggtgatcttgcttctgatgacgtcatcacttcagaagcactt--gacttcaggagcacttctcttcagacgctttaagcttcctttttgttgatt 17238774  T
Q  356 ccattactctcttttgttcttccagaacct 385  Q
    || |  |||||||||||||||  |||||||    
T  17238773 ccttagctctcttttgttcttaaagaacct 17238744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 11868264 - 11868325
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgt 72  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||| |||||||||    
T  11868264 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaatcgtactttgt 11868325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 46796531 - 46796324
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||| ||| ||||||          
T  46796531 agcagagacaaaaacaaagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagtatctaatgcc------ 46796438  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
       ||||||| ||| ||||||   ||| || |||||||||||||| |||||||||| || ||||| || |||| | |||||||||||||||  | |||||    
T  46796437 ---tttcaaattagccgttgtaatacttttccagtcttctgcaat-cttagacgagtttgaatcctttaaacaacttttgaagctttaagt--tgcatct 46796344  T
Q  210 cctgatgaactacaacttct 229  Q
    ||||||||||| || |||||    
T  46796343 cctgatgaactgcagcttct 46796324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 26417542 - 26417489
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  26417542 ttcagatgcttcaagcttccttcttgttgattccattgctctcatttgttcttc 26417489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 1728179 - 1728129
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  1728179 agcagagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaa 1728129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 12968312 - 12968446
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||   || | | ||| ||||| ||| |||||||||||||||||  |||  ||     
T  12968312 aaacagagtagtggagatagtggttgtacacttcgtataattgtccttttccaacgttcttcaaagaataagtatccaatgccttcaaattcttttgaat 12968411  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatg 155  Q
    ||||||||  ||||  |||  ||||||||||||||    
T  12968412 tagtcgttacttcatgcttctagtcttctgcaatg 12968446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 49666569 - 49666519
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| || | |||||||||||||||||||||||||||||||||||    
T  49666569 agcagagacagaatcagagtagtggagatagtggttgtacacttcgtacaa 49666519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 385
Target Start/End: Original strand, 12968655 - 12968708
Alignment:
Q  332 cttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||| |||||||    
T  12968655 cttcaagcttccttcttgttgattccattaccctcatttgttcttctagaacct 12968708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 20725400 - 20725461
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||||||| ||||||||| |||| ||||| ||||||||| || |||||    
T  20725400 ttcagatgcttcaagcttccttcttgttgatttcattgctctcatttgttcttacataacct 20725461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 384
Target Start/End: Complemental strand, 12388727 - 12388667
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacc 384  Q
    |||||||||||||||||||||| |||||||||||||| ||||| | |||||| ||| ||||    
T  12388727 ttcagatgcttcaagcttccttcttgttgattccattgctctcatatgttctcccaaaacc 12388667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 383
Target Start/End: Original strand, 14073003 - 14073051
Alignment:
Q  335 caagcttcctttttgttgattccattactctcttttgttcttccagaac 383  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||||||    
T  14073003 caagcttcctttttgtagattccattgctctcatttgttcttccagaac 14073051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 385
Target Start/End: Complemental strand, 38177558 - 38177479
Alignment:
Q  306 tcttcaggagaactgct-attcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||| ||| || ||||||||| ||||||||||||||||||||||||  || |||| |||| ||||||||||||||    
T  38177558 tcttcaggagcacttctcattcagatgtttcaagcttcctttttgttgattcatttgctct-tttttttcttccagaacct 38177479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 20627330 - 20627275
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||||| |||| |||||||||||||||||||||| || |||||| |||||||||||    
T  20627330 ttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttcca 20627275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 315
Target Start/End: Original strand, 40851184 - 40851242
Alignment:
Q  256 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||||||||||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  40851184 cttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 40851242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 383
Target Start/End: Complemental strand, 49553359 - 49553280
Alignment:
Q  306 tcttcaggagaactgcta-ttcagatgcttcaagcttcctttttgttgattccattactct-cttttgttcttccagaac 383  Q
    |||||||||| ||| ||| |||||| ||||||||||||||||||||||||||  || |||| || |||||||||||||||    
T  49553359 tcttcaggagcacttctacttcagacgcttcaagcttcctttttgttgattcatttgctctcctgttgttcttccagaac 49553280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 8728866 - 8728816
Alignment:
Q  335 caagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||||  |||||||| ||||| ||||||||||||||||||    
T  8728866 caagcttcctttttgtaaattccattgctctcatttgttcttccagaacct 8728816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 9080753 - 9080703
Alignment:
Q  335 caagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||||  |||||||| ||||| ||||||||||||||||||    
T  9080753 caagcttcctttttgtaaattccattgctctcatttgttcttccagaacct 9080703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 9700200 - 9700150
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| |||||||| ||||||||||| ||||||||||||||    
T  9700200 agcagagacaaaaacagagtagtgcagatagtggttatacacttcgtacaa 9700150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 12388791 - 12388729
Alignment:
Q  241 gcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 303  Q
    |||||| ||||| ||||| |||||||||||||||||||||||| ||||  |||||| ||||||    
T  12388791 gcttctgatgaggtgcttatgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 12388729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 30054381 - 30054331
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| ||||||||||| ||||||||||||| |||||||||    
T  30054381 agcagagacaaaaacagagtagtggagttagtggttgtacatttcgtacaa 30054331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 382
Target Start/End: Complemental strand, 16658551 - 16658434
Alignment:
Q  270 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttt-----ttgttgattccattactc 364  Q
    |||||||||||||| ||||  ||| || || ||||||||||||||| ||| || |||||| |||| |||||||||||     || || ||||| || |||    
T  16658551 gcttctgatgacgtcatcacttcatgagcatttttgtcttcaggagcacttctcttcagacgctttaagcttcctttattttttttttattcctttgctc 16658452  T
Q  365 tcttttgttcttccagaa 382  Q
    | ||||||||||||||||    
T  16658451 tattttgttcttccagaa 16658434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 37412605 - 37412650
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||    
T  37412605 agacagaaacagagtagtggagatagtggttgtacatttcgtacaa 37412650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 50300440 - 50300500
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||||||||||||||||||||||||||||| || |  |||||| ||| ||||||||||||||    
T  50300440 tgcttctgatgaacttgcttctgatgacgtcattacttcaggagcac-tttgtcttcaggag 50300500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 50300526 - 50300587
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| |||| |||||||||||||||||||||| || |||| | ||||||||||| |||||    
T  50300526 ttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttccaaaacct 50300587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 11908817 - 11908761
Alignment:
Q  324 ttcagatgcttcaagcttc-ctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||||| | ||||| ||||||||||||||| || ||||||||||||||||||    
T  11908817 ttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttcca 11908761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 18142702 - 18142643
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||||||||||| | ||  |||||| ||| ||||||||||||||    
T  18142702 gcttctgatgaacttgcttctgatgacgtcaccacttcaggaacac-tttgtcttcaggag 18142643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 30054161 - 30054102
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||||||||||| ||||  ||| || ||| ||||||||||||||    
T  30054161 gcttctgatgaacttgcttctgatgacgtcatcacttcatgagcac-tttgtcttcaggag 30054102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 379
Target Start/End: Original strand, 47207986 - 47208073
Alignment:
Q  291 tcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||||| |||||| ||||||||||| | |  | |||||| |||| |||||||||||||||||||||  || |||||| |||||||||||    
T  47207986 tcaggagcacttt-gtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcatttgctctctattgttcttcca 47208073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 385
Target Start/End: Complemental strand, 4243047 - 4242996
Alignment:
Q  334 tcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||  |||||||| ||||| |||||||||||| |||||    
T  4243047 tcaagcttcctttttgtaaattccattgctctcatttgttcttccataacct 4242996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 26417832 - 26417789
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgt 65  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||    
T  26417832 aaacagagtagtgaagatagtggttgtacactttgtacaattgt 26417789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 12726111 - 12726053
Alignment:
Q  327 agatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| ||||||||||||||||| |||||||  |   |||||||||||||||||||||||    
T  12726111 agatccttcaagcttcctttttattgattctttagatctcttttgttcttccagaacct 12726053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 11869401 - 11869449
Alignment:
Q  331 gcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||| |||||||||||||||||||||| || |||| | |||||||||||    
T  11869401 gctttaagcttcctttttgttgattcctttgctctttattgttcttcca 11869449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 12752453 - 12752397
Alignment:
Q  324 ttcagatgcttcaagcttc-ctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||||| | ||||| ||||||||||||||  || ||||||||||||||||||    
T  12752453 ttcagatgctttaggcttctctttttgttgattcttttgctctcttttgttcttcca 12752397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 13557777 - 13557809
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacactt 54  Q
    |||| ||||||||||||||||||||||||||||    
T  13557777 aaacagagtagtggagatagtggttgtacactt 13557809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 33598105 - 33598164
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||||||| ||||||| |||||||||||| ||||  |||||| ||| ||||||||||||||    
T  33598105 gcttctgacgaacttgtttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 33598164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 40800117 - 40800189
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||| |||  | |||||| |||| |||||||||||||||||||| | || |||||| || ||||||||    
T  40800117 cttcaggagcacttttcttcagacgctttaagcttcctttttgttgatttctttgctctctattattcttcca 40800189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 106)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 14 - 385
Target Start/End: Original strand, 11319400 - 11319771
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaaatca 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||| ||||| || || ||||||||||| ||||||||     
T  11319400 agagacacaaactgagtagtggagatagtggttgtacacttcgtgcaattgtaatttgtcaacgctcttcaaaaaacacgcatccaatgcattcaaatcc 11319499  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| | |||||| |    
T  11319500 tttcaaaatagttgttacttcactctttcagtcttctgcaatgcttagacaagattaaatccattgaacatcctttgaagcttgaagtcttgcatctctt 11319599  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcag 312  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||| ||||  |||||| ||| |||| ||||||    
T  11319600 gatgacctacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttttaatgacgtcatcacttcaggagcac-tttggcttcag 11319698  T
Q  313 gagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| ||| || |||||| |||| |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  11319699 gagcacttctcttcagacgctttaagcttcctttttgttgatttcattgctctcttttgttcttccagaacct 11319771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 10883339 - 10882965
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| || ||| ||||| ||||| ||||||||||||||||||    
T  10883339 agcagagacgcaaactgagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaggcatccaatgccttcaaa 10883240  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||| |||||||| ||||||||| | |||||    
T  10883239 tcctttcaaaatagtcgttgcttcactcttccagtcttctgaaatgattagacgagattaaatccattgaacaacctttgaaactttaagtcttgcatct 10883140  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||| |||||  |||  |||||| ||| |||| |||    
T  10883139 cctgatgaactacagcttctggtgatcttcagcttctgatgggatgcttctgatgaacttgcttctgacgacgtcgtcacttcaggagcac-tttgactt 10883041  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| || ||| || |||||| |||| ||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  10883040 cagtagcacttctcttcagacgctttaagcttcatttttgttgattcctttgctctcttttgttcttccagaacct 10882965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 13880096 - 13880470
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||| ||||||| ||||||||||||    
T  13880096 agcagagacacaaagtgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaataagcatctaatgccttcaaa 13880195  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | ||  |    
T  13880196 tcctttcaaaatagtcgttgcttcactcgtcgagtcttctgcaatgcttagacgagattaagtccattgaacagcctttgaagctttatgtcttgcaatt 13880295  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||| | |||||  | ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||  |||||| ||| |||| |||    
T  13880296 cctgatgaactagagcttctcatgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgatgtcatcacttcaggagcac-tttgactt 13880394  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| || ||| || |||||| |||| |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  13880395 cagaagcacttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 13880470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 2913774 - 2913413
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  2913774 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 2913675  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| | |||| ||  ||||||||||| || ||||| |||||||||| ||||||||||||||||||| |||||||| | |||||    
T  2913674 tcctttcaaaatagtcgttgctccacttttctagtcttctgcattgtttagatgagattaaattcattgaacagcctttgaagatttaagtcttgcatct 2913575  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||||||  ||||||| |||||||               |||||||||||||||||| ||||||||| || |  |||||| ||||||||||||    
T  2913574 cctgatgaactacagtttctggtgatcttca--------------tcttctgatgaacttgcttttgatgacgtcattacttcaggagcacttttgtctt 2913489  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || |||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  2913488 caggagcacttctcttcatatgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 2913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 12366914 - 12366542
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||| ||| || ||| ||||| |||||  |||||||||| ||||||    
T  12366914 agcagagacacagactgattagtggaggtagtggttgtatacttcgtacaattgtactatgtcaacgctcttcaaagaacagacatccaatgctttcaaa 12366815  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||  | || ||    
T  12366814 tcctttcaaaatagttgttgcttcactctcccagtcttctgcaatgcttaaacgagattaaatccattgaacagcccttgaagctttaagttttgcacct 12366715  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||| || |||||||| | |||  |||||| ||||||||||| ||||||||||| ||||||||| || ||||  |||||| ||||||    ||    
T  12366714 cctgatgaacttcagcttctggtgacctt--gcttctgatgagatgcttttgatgaacttgattctgatgatgtcatcacttcaggagcactttaaa-tt 12366618  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || || |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  12366617 caggagcacttctctttagatgcttcaagcttcctttttgttgattccattgctctctttttttcttccagaacct 12366542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 12 - 385
Target Start/End: Original strand, 15088513 - 15088855
Alignment:
Q  12 gcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| || || |||||||||||||||| ||||||||    
T  15088513 gcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatccaatgtcttcaaat 15088612  T
Q  111 catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctc 210  Q
    | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  15088613 cctttcaaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttacgtcttgcatctc 15088712  T
Q  211 ctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttc 310  Q
    |||||||| || | |||||||| |||||||||              || |||||||||||||||||||||||| ||||                  ||||    
T  15088713 ctgatgaattagagcttctggtgatcttcagc--------------ttatgatgaacttgcttctgatgacgtcatca------------------cttc 15088780  T
Q  311 aggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||| ||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  15088781 aggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 15088855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 22578187 - 22577812
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  |||||||| ||| |||||||||||||    
T  22578187 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttttaagaacaatcattcaatgccttcaaa 22578088  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||| | |||||    
T  22578087 tcctttcaaaatagttgttgcttcactcttacagtcttctgcaatgcttaaacgagattaaatctattgaacaccctttgaagctttaagtcttgcatct 22577988  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||| || |||||||| |||||  || ||| |||||||||||||||||| ||||||||| ||||||| ||||  |||||| |||||||  |||    
T  22577987 cctgatgaacttcagcttctggtgatctt--gcctctgatgagatgcttctgatgaccttgcttctaatgacgtcatcacttcaggagcactttt-actt 22577891  T
Q  310 caggagaactgctattcagatg--cttcaagcttcctttttgttgattccattactct-cttttgttcttccagaacct 385  Q
    |||||| ||| || ||| |  |  |||||||||||||||||||||||||  || |||| ||||||||||||||||||||    
T  22577890 caggagcacttctcttctggagcacttcaagcttcctttttgttgattcatttgctctccttttgttcttccagaacct 22577812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 30025897 - 30026257
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| || ||| || || ||||||||||| |||||||||||     
T  30025897 agcagagacacaaactgagtagtagagatattggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatcgaatgccttcaat 30025996  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||| |||||||||||| |||| |||||||||||||||| | |||||    
T  30025997 tcttttcaaaatagccgttgcttcactctttcagtcttctgcgatgcttatacgagactaaatccattgaccagcgtttgaagctttaagtcttgcatct 30026096  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    | |||||||||| | |||||||| |||||||              ||||||||||||||||||||||||||||| ||||  |||||| |||||||  |||    
T  30026097 cttgatgaactagagcttctggtgatcttca--------------gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttt-actt 30026181  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| || ||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  30026182 cagaagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccataacct 30026257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 44467056 - 44467416
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| ||  ||  || ||||||||||||||||||||||||||    
T  44467056 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctttaaagaacaagcatccaatgccttcaaa 44467155  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatc 208  Q
    || ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | ||||    
T  44467156 tcctttcaaaatagtcgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgaacaaccttttgaagctttaagtcttgcatc 44467255  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    |||||||||||| || ||| |||| |||||||              ||||||||||||||||||||||||| ||| ||||  |||||| |||| |   ||    
T  44467256 tcctgatgaacttcagcttttggtgatcttca--------------gcttctgatgaacttgcttctgatggcgtcatcacttcaggagcactat--act 44467339  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||| ||| || |||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||    
T  44467340 tcaggagcacttctcttcagatgcttcaaacttcctttttgttgattccattgctctattttgttcttccagaacct 44467416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 11792899 - 11793273
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||| ||||| ||||||    
T  11792899 agcagagacacaaactaagtggtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatcaaatgctttcaaa 11792998  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |  ||||||||||||||||| |||||||||   |||||  ||||||||||||||||||||| ||||||||||| ||||| |||||||||||| | |||||    
T  11792999 tgctttcaaaatagtcgttgcttcactcttatggtctttcgcaatgcttagacgagattaagtccattgaacaacctttaaagctttaagtcttgcatct 11793098  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgc-ttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    ||||||||||| || |||||||| ||||| ||||||| |||||||| || |||||||||||| || | ||||||| ||||  | |||| |||  |   ||    
T  11793099 cctgatgaacttcagcttctggtgatctttagcttctgatgagatgtttatgatgaacttgctttttaatgacgtcatcactttaggagcac--taaact 11793196  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||    
T  11793197 tcaggagcacttcttttcagatgcttcaagcttcctttttgttgattccttcgctctcttttgttcttcctgaacct 11793273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 2500030 - 2500391
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||  || ||||| | | ||||||||||||| ||||||    
T  2500030 agcagagacacaaactgagtagtggagaaagtggttgtacactttgtacaattgtactttgtcaactctcttcaaaggataagcatccaatgctttcaaa 2500129  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| | |||||    
T  2500130 tcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatct 2500229  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||  ||| | | |||||||| ||| |||              ||||||||||||||||||| ||||||||| ||||  ||| || ||||||||||||    
T  2500230 cctgaaaaacaagagcttctggtgatcctca--------------gcttctgatgaacttgcttatgatgacgtcatcacttcatgagcacttttgtctt 2500315  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || |||||||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||    
T  2500316 caggagcacttctcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccataacct 2500391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 11 - 302
Target Start/End: Complemental strand, 16316723 - 16316433
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || ||| ||||| |||||||||||||||| |||||||    
T  16316723 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatttcaacgctcttcaaagaacaagcatccaatggcttcaaa 16316624  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||  |||| |||||||||   |||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| | ||||     
T  16316623 tcctttcaaaatagctgttgcttcactcttctggtcttctgcaattcttagacgtgattaaatccattgaacaacctttgaagctttaagtcttgcatcc 16316524  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactt 302  Q
    ||||||||||| ||||||||||| |||||  |||||| |||||||||||||||||||||||||||||||||| | ||||  |||||| |||||    
T  16316523 cctgatgaacttcaacttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttctgatgacatcatcacttcaggagcactt 16316433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 13138061 - 13137827
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  13138061 agcagagacataaactgagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 13137962  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| | |||||    
T  13137961 tcttttcaaaatagttgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgattaacctttgaagctttaagtcttgcatct 13137862  T
Q  210 cctgatgaactacaacttctggttatcttcagctt 244  Q
    ||| |||||||| | |||||||| |||||||||||    
T  13137861 ccttatgaactagagcttctggtgatcttcagctt 13137827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 14 - 281
Target Start/End: Complemental strand, 21283536 - 21283270
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  || |||||||||||||||||||||||||     
T  21283536 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaataacaagcatccaatgccttcaaatcc 21283437  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||| | ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| ||||    
T  21283436 tttcaaaatggacgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatatcct 21283337  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgac 281  Q
    |||||||| ||||||||||| |||||  |||||| ||||||| ||||||||||||||| ||||||||||    
T  21283336 gatgaacttcaacttctggtgatctt--gcttctgatgagattcttctgatgaacttgattctgatgac 21283270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 14 - 385
Target Start/End: Original strand, 28409034 - 28409400
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  |||||||| |||||||||||||||||||     
T  28409034 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcc 28409133  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    |||||||||| | |||| |||||||||  |||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| ||| | |||||| |    
T  28409134 tttcaaaataattgttgcttcactcttctagtcttctgcaatgtttagacgagattaaatccattgaacaacctttgaagccttatgtcttgcatctctt 28409233  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcag 312  Q
    ||||||||  | |||||||| | ||   |||||| |||||||||||||||||||||||||||||||||||| ||||  |||||| |||||     ||||     
T  28409234 gatgaactttagcttctggtga-ctgttgcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt-----ttcaa 28409327  T
Q  313 gagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
     || ||| || |||||| ||||||| |||||||||||| |||||  || ||||||||||||||| ||||||||    
T  28409328 tagcacttctcttcagacgcttcaaacttcctttttgtcgattcatttgctctcttttgttcttacagaacct 28409400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 27 - 288
Target Start/End: Original strand, 15467924 - 15468186
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtc 125  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||| ||| |||||||||    
T  15467924 gagtagtggaggtaatggttgtacacctcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatccttttaaaatagtc 15468023  T
Q  126 gttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaac 225  Q
    |||| ||||||||| |||||||||||| ||| |||||||||||||||| |||||||| |||||||||||||||||| | ||||||||||||||||| | |    
T  15468024 gttgattcactcttccagtcttctgcattgcctagacgagattaaatctattgaacaccctttgaagctttaagtcttgcatctcctgatgaactagagc 15468123  T
Q  226 ttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatca 288  Q
    ||||||| ||||||||| ||| ||||||||| | |||||||||||||||||||||||| ||||    
T  15468124 ttctggtaatcttcagcatctgatgagatgcatatgatgaacttgcttctgatgacgtcatca 15468186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 241
Target Start/End: Original strand, 13302802 - 13303033
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| ||||| ||||||||||| ||||||||||||    
T  13302802 agcagagacacaaactgagtagtggtgatagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaa 13302901  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||||||  |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||| | |||||    
T  13302902 tcctttcaaaatagtcgttgcttcactcttctagtcttctacaatgcttagacgatattaaatccattgaacaacctttgaagctttaagtcttgcatct 13303001  T
Q  210 cctgatgaactacaacttctggttatcttcag 241  Q
    ||| |||||||||| |||||||| ||||||||    
T  13303002 cctaatgaactacagcttctggtgatcttcag 13303033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 40 - 385
Target Start/End: Original strand, 13692372 - 13692707
Alignment:
Q  40 agtggttgtacacttcgtacaattgtactttgttaaagctgt-tcaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactct 138  Q
    ||||||||||||||||||||||||||||||||| ||  || | | |||| ||||||||||||| |||         |||||||||| |||| ||||||||    
T  13692372 agtggttgtacacttcgtacaattgtactttgtcaacactctataaagatcaagcatccaatgtctt---------tcaaaatagttgttgcttcactct 13692462  T
Q  139 ttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatctt 238  Q
    | ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||  | |||||||| |||||    
T  13692463 tccagtcttctgcaatgcttatacgagattaaatccattgaacaacctttgaagctttaagtcttacatcttctgatgagctttagcttctggtgatctt 13692562  T
Q  239 cagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaag 338  Q
      |||||| | ||||||||||||||||||||||||||||||| || ||||  |||||| |||||||||||||||||| ||| || |||||| || | |||    
T  13692563 --gcttctgaagagatgcttctgatgaacttgcttctgatgatgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaag 13692660  T
Q  339 cttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||  ||||||| || ||||||||||||||||||||||||    
T  13692661 cttcctttttcctgattcctttgctctcttttgttcttccagaacct 13692707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 11 - 283
Target Start/End: Original strand, 9069554 - 9069828
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctg-ttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| || |||  || |||||||||||| ||||||||| |||    
T  9069554 agcagagacaaaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctccttgaagaacaagcatacaatgcctttaaa 9069653  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||  | |||||    
T  9069654 tcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgatattaaatcccttgaacaacctttgaagctttaagttttgcatct 9069753  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgt 283  Q
    ||||||||| || | |||||||| || |||||||||| ||| |  || ||||||| |||||||||||||||||||    
T  9069754 cctgatgaaatagagcttctggtgattttcagcttctgatgaacttgtttctgataaacttgcttctgatgacgt 9069828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 21695393 - 21695634
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  21695393 agcagagacacaaactgagtagttgaggtactggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 21695492  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    ||||||  |||||||||||| |||||||||   |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| | |||||    
T  21695493 tcattttgaaatagtcgttgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaagctttaagtcttgcatct 21695592  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    | ||||||||| || |||||||| ||||||||||||| ||||    
T  21695593 cttgatgaacttcagcttctggtgatcttcagcttctgatga 21695634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 33691878 - 33691518
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||||||| || ||| ||  ||||||||||||| || ||||| |||    
T  33691878 agcagagacaaaaacagagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatctaacgcctttaaa 33691779  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |  ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||    
T  33691778 ttctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccatttaacagcctttgaagctttatgtcttgcatct 33691679  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||| | |||||||| || ||||               ||||| ||||||||||||||||| |||| | ||  |||||| ||| ||||||||    
T  33691678 cctgatgaactagagcttctggtgattttca--------------acttctaatgaacttgcttctgataacgtcaccacttcaggagcac-tttgtctt 33691594  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| | | || |||||| |||| || ||||||||||||||||||| || |||||| |||||||||||||||||    
T  33691593 caggagcagttctcttcagacgctttaaacttcctttttgttgattcctttgctctctattgttcttccagaacct 33691518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 13730839 - 13730638
Alignment:
Q  13 cagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatc 111  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||| ||||||||    
T  13730839 cagagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcattcaaatc 13730740  T
Q  112 atttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcc 211  Q
     ||||||||||| ||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| | | |||||||    
T  13730739 ttttcaaaatagccgttgcttcactcttttagtcttatgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagccttgcatctcc 13730640  T
Q  212 tg 213  Q
    ||    
T  13730639 tg 13730638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 11 - 377
Target Start/End: Complemental strand, 13260781 - 13260424
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | | || ||| ||| ||||||||||||||||||| |||| |    
T  13260781 agcagagacacaaactgggtagtggagatagtggttgtacacttcgtacaattgtactatctcaatgctcttccaagaacaagcatccaatgctttcata 13260682  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
           | |||||| |||| || |||| |   |||||| ||||||||| |||||||||||||||||| ||||| ||||| ||||||||||| | |||||    
T  13260681 -------agaatagttgttgctttactcctctggtcttccgcaatgcttggacgagattaaatccatt-aacagtctttggagctttaagtcttgcatct 13260590  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||  | |||||||| |||||  |||||| ||||||||||| |||||||||||||||||||||| | ||||  |||||| |||||||| |||    
T  13260589 cctgatgaactttagcttctggtgatctt--gcttctaatgagatgcttatgatgaacttgcttctgatgacatcatcacttcaggagcacttttgactt 13260492  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    || ||| ||| || || | |||||||||||||||||| |||| ||||| |  ||||||||||||||||    
T  13260491 catgagcacttctctttaaatgcttcaagcttcctttatgttaattccttatctctcttttgttcttc 13260424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 13648721 - 13648928
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||| || ||||||||||||| ||| |||    
T  13648721 agcagagacacaaattgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagatcaagcatccaatgtctttaaa 13648820  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||   |||||    
T  13648821 tcctttcaaaatagccgttgcttcactctttcagtcttctgcaatgcttagacgcgattaaatccattgaacatcttttgaagctttaagtctcgcatct 13648920  T
Q  210 cctgatga 217  Q
    ||||||||    
T  13648921 cctgatga 13648928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 22 - 246
Target Start/End: Complemental strand, 23280113 - 23279889
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||| |||||||     
T  23280113 aaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaac 23280014  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaact 220  Q
    ||| ||||| | |||| || ||||||||| |||||||||||| |||||||||||| |||| |||||||||||||||||||| | ||||||||||||||||    
T  23280013 tagccgttgctccacttttccagtcttctacaatgcttagacaagattaaatcca-tgaatagcctttgaagctttaagtcttgcatctcctgatgaact 23279915  T
Q  221 acaacttctggttatcttcagcttct 246  Q
    |||||||||||| || |||| |||||    
T  23279914 acaacttctggtgattttcaccttct 23279889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 11 - 230
Target Start/End: Original strand, 21692279 - 21692499
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  21692279 agcagagacacaaactgagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 21692378  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||| |||||||| |||||||||   ||||||||||||||||||| |||||||||  ||||||| | | |||||||||||||||| | |||||    
T  21692379 tcctttcaaaacagtcgttgcttcactcttctggtcttctgcaatgcttagaagagattaaaatcattgaataacttttgaagctttaagtcttgcatct 21692478  T
Q  210 cctgatgaactacaacttctg 230  Q
    ||| ||||||| || ||||||    
T  21692479 cctaatgaacttcagcttctg 21692499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 24788136 - 24788361
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| ||  || ||  ||||||||||| ||||||||||||||||     
T  24788136 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaattctctttgaagaacaagcacccaatgccttcaaatcc 24788235  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    |||||||||| |||||| |||||||||  |||||||||||||||||||| || |||||||| |||||||| |||||||||||||||||| | ||||||||    
T  24788236 tttcaaaatattcgttgcttcactcttctagtcttctgcaatgcttagatgatattaaatctattgaacaacctttgaagctttaagtcttgcatctcct 24788335  T
Q  213 gatgaactacaacttctggttatctt 238  Q
     ||||||| || |||||||| |||||    
T  24788336 aatgaacttcagcttctggtgatctt 24788361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 9709968 - 9709729
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||| ||||||  |||||||| ||||||||||||| ||||||| ||| || ||| ||  ||||||||||||| ||||||||||||    
T  9709968 agcagagacaaaaacagagcagtggatgtagtggttttacacttcgtacagttgtactatgtcaacgctctttgaagaacaagcatctaatgccttcaaa 9709869  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  | |||||    
T  9709868 tcctttcaaactaggcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaggctttgaagctttatgt--tgcatct 9709771  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||||||||| || |||||||| || |||||||||| ||||    
T  9709770 cctgatgaactgcagcttctggtgattttcagcttctgatga 9709729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 30944489 - 30944271
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||||| || ||| ||  ||||| ||||||||||||||||||||    
T  30944489 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaataagcatccaatgccttcaaa 30944390  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||| || || ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||  | |||||    
T  30944389 tcctttcaaaatagttgttgcttcacttttccaatcttctgcaatacttagacgagattaaatccgttgaacaacctttgaagctttaagt--tgcatct 30944292  T
Q  210 cctgatgaactacaacttctg 230  Q
    ||||||||||| || ||||||    
T  30944291 cctgatgaactgcagcttctg 30944271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 29935524 - 29935272
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||  || ||||||||||||||||||| ||||||    
T  29935524 agcagagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaatgctttcaaa 29935425  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||||||   ||||||||||||| |||   | ||||||||  |||||||| ||||||||  |||||||| | |||||    
T  29935424 tcctttcaaaatagtcgttgcttcactcttctggtcttctgcaatg-ttaagtgtgattaaatatattgaacaacctttgaaattttaagtcttgcatct 29935326  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatga 265  Q
    |||||||||||  | |||||||| |||||  |||||| ||||||||||||||||||    
T  29935325 cctgatgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatga 29935272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 48237068 - 48236829
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  ||||| |||||||  |||||||||||    
T  48237068 agcagagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataagcatctgatgccttcaaa 48236969  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| | ||||||| |||||  |||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||||  | |||||    
T  48236968 tcctttcaaacttgtcgttgcttcaccttttcagtcttatgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaagt--tgcatct 48236871  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||||||||| || |||||||| || |||||||||| ||||    
T  48236870 cctgatgaactgcagcttctggtgattttcagcttctgatga 48236829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 331637 - 331877
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaacaagcatccaatgccttcaaat 110  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| || ||| || |  || |||||||||||||||||| ||    
T  331637 agcagagacacaaactgtgtagtggaggtagtggttgtacacttcgtacatttgtactttgtcaacgcttttgagcaataagcatccaatgccttcagat 331736  T
Q  111 catttc-aaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    | |||| |||||||  |||| ||||||||| |||||||||||||||||| |||||  || |||||||  |||| |||||||||||||||||||  |||||    
T  331737 cctttcaaaaatagctgttgcttcactcttccagtcttctgcaatgcttggacgaccttgaatccataaaacaacctttgaagctttaagtcc-gcatct 331835  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||||| ||| || |||||||| ||||||||||||| ||||    
T  331836 cctgatggacttcagcttctggtgatcttcagcttctgatga 331877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 230
Target Start/End: Complemental strand, 30945518 - 30945304
Alignment:
Q  15 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaag-aacaagcatccaatgccttcaaatcat 113  Q
    |||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  || ||||||||||||||||||||||||| |    
T  30945518 gagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaggaacaagcatccaatgccttcaaatcct 30945419  T
Q  114 ttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctg 213  Q
    ||||||||||| |||| |||||| || || |||||| |||| ||||||||||||||||||| ||||||| |||||||||||||||||  | |||||||||    
T  30945418 ttcaaaatagttgttgcttcacttttccaatcttctacaatacttagacgagattaaatccgttgaacaacctttgaagctttaagt--tgcatctcctg 30945321  T
Q  214 atgaactacaacttctg 230  Q
    ||||||| || ||||||    
T  30945320 atgaactgcagcttctg 30945304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 33605677 - 33605917
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||  ||||||| || |||||||||||||||||||||||| ||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  33605677 agcagagacaaaaacatagtagtgaaggtagtggttgtacacttcgtacaatcgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 33605776  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatc 208  Q
    || ||||||||||||| ||| |||| | || ||||| |||||| ||||||||||||||||||||| ||||| |||| |||||||||||| ||  | ||||    
T  33605777 tcctttcaaaatagtcattgcttcaattttccagtcatctgcattgcttagacgagattaaatccgttgaaaagccttttgaagctttatgt--tgcatc 33605874  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    |||||||||||| || |||||||| || |||||||||| ||||    
T  33605875 tcctgatgaactgcagcttctggtgattttcagcttctgatga 33605917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 39284727 - 39284490
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa-tc 111  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||| |||||||| ||||||||||||||||| ||    
T  39284727 agagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaaacatccaatgccttcaaattc 39284628  T
Q  112 atttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcc 211  Q
    ||||  || |||||||||||||||||||   |||||| ||||||| ||| || |||||||||| ||||||||||||||||||||| | ||   ||||| |    
T  39284627 attt-gaattagtcgttgtttcactcttctggtcttcagcaatgc-taggcgtgattaaatcctttgaacagcctttgaagctttgattctctcatcttc 39284530  T
Q  212 tgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    |||||| || || |||||||| ||||||||||||| ||||    
T  39284529 tgatgatcttcagcttctggtgatcttcagcttctgatga 39284490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 19237204 - 19237022
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatt 114  Q
    |||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||| || ||| ||  |||||||||||||||||||||||||||| ||    
T  19237204 agacacaaacagagtagtggaggtagtggttgtacacttcgtataattgtagtttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctt 19237105  T
Q  115 tcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaa 198  Q
    ||||| ||| ||||| |||||||||   |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  19237104 tcaaagtagccgttgcttcactcttctggtcttctgcaatgc-tagacgagattaaatcctttgaacagcctttgaagctttaa 19237022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 5000985 - 5000796
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || | | ||| |||||||||||| |||||| ||||||||     
T  5000985 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgttcttcaaagaacaagcattcaatgctttcaaatcc 5000886  T
Q  113 tttcaaaatagtcgttgtttcac-tctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc 201  Q
    ||||||||||||||||| ||||| ||| |  ||||| |||||||||| | ||||||| ||||||||||||| ||||||||||| ||||||    
T  5000885 tttcaaaatagtcgttgcttcacttctcttggtcttttgcaatgcttgggcgagattgaatccattgaacaacctttgaagctctaagtc 5000796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 262
Target Start/End: Complemental strand, 13018671 - 13018421
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaa- 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| || | ||||||||||||||||||     
T  13018671 agcacagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaatccagcatccaatgccttcaac 13018572  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacat 207  Q
     |||||| ||||||||||||| ||||||||   ||||||||||||| | | | || ||||||||||||||||||||| ||||||||||||||||   | |    
T  13018571 ttcattt-aaaatagtcgttgcttcactctcctagtcttctgcaatac-tgggcgtgattaaatccattgaacagccttttgaagctttaagtc--tcgt 13018476  T
Q  208 ctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctga 262  Q
    || |  ||||||| || |||||||| |||||| |||||| ||||| |||||||||    
T  13018475 cttcatatgaacttcagcttctggtgatcttctgcttctgatgaggtgcttctga 13018421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 230
Target Start/End: Original strand, 14426542 - 14426757
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| ||||||||||| |||||||||||||||| ||||||  ||||||||| || ||| ||  ||||||||||||||||||||||||||||     
T  14426542 agagacaaaaacagagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 14426641  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||||||||||| |||||| || ||||||||||||||  ||||| ||| || |||||||| |||||| | |||||||||||||  | ||||||||    
T  14426642 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatccattaaacagcttctgaagctttaagt--tgcatctcct 14426739  T
Q  213 gatgaactacaacttctg 230  Q
    |||||||| || ||||||    
T  14426740 gatgaactgcaccttctg 14426757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 14 - 303
Target Start/End: Complemental strand, 35952851 - 35952561
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| ||||| ||||| |||||||||||||||||||||||  ||||||||| || ||| ||  | |||||| |||||||||||||||||||     
T  35952851 agagacaaaaacagagtaatggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgatgaacaaacatccaatgccttcaaatcc 35952752  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaat-ccattgaacagcctttgaagctttaagtcctacatctcc 211  Q
    ||||||||||||||||| |||||| || ||||||||| |||| |||||||||| || ||| ||||| |||||| |||||||| ||||||  | ||||  |    
T  35952751 tttcaaaatagtcgttgcttcacttttccagtcttcttcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagt--tgcatcctc 35952654  T
Q  212 tgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 303  Q
    ||||||||| ||||||||||| || || ||||||| ||  |  ||||||||||||| |||||||||||| ||| ||||  |||||| ||||||    
T  35952653 tgatgaactgcaacttctggtgatttttagcttctgataaacttgcttctgatgaatttgcttctgatgtcgtcatcacttcaggaacacttt 35952561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 28622522 - 28622302
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||| ||| ||| |||||||||||||| ||||||||||||||||||| || ||  ||  || ||||| |||||||||||||||||    
T  28622522 agcagagacaaaaacagagaagtagaggtagtggttgtacacctcgtacaattgtactttgtcaacgccctttgaaaaacaaacatccaatgccttcaaa 28622423  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||| ||||| |||||| ||  ||| ||||||||||||||||||||||| ||||||||||||| | |||||||||||||||  | |||||    
T  28622422 tcctttcaaattagccgttgcttcacttttctagtattctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaagt--tgcatct 28622325  T
Q  210 cctgatgaactacaacttctggt 232  Q
    ||||||||||| || ||||||||    
T  28622324 cctgatgaactgcagcttctggt 28622302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 185 - 385
Target Start/End: Original strand, 14193241 - 14193445
Alignment:
Q  185 ctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgtt 284  Q
    ||||||||||||||||| | |||||| |||||||||| | ||| |||| |||||| |||||| || |||||||| ||||||||||||||||||||||||     
T  14193241 ctttgaagctttaagtcttgcatctcttgatgaactagagcttatggtgatcttctgcttctgataagatgcttatgatgaacttgcttctgatgacgtc 14193340  T
Q  285 atcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattc---catta-ctctcttttgttcttccag 380  Q
    ||||  |||||| ||||||||||||||||||  || || |||||| |||||||||||| |||||||||||||    |||| |||||||||||||||||||    
T  14193341 atcacttcaggagcacttttgtcttcaggagcgcttctcttcagacgcttcaagcttcatttttgttgattctttaattagctctcttttgttcttccag 14193440  T
Q  381 aacct 385  Q
    |||||    
T  14193441 aacct 14193445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 39 - 385
Target Start/End: Original strand, 13880608 - 13880956
Alignment:
Q  39 tagtggttgtac-acttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcact 136  Q
    |||||||||||| ||||||||||||||| |||| | || ||| ||||| ||||||||||||| |||||||||||| |||  || ||||||||| ||||||    
T  13880608 tagtggttgtaccacttcgtacaattgtcctttttcaacgctcttcaaagaacaagcatccagtgccttcaaatccttttgaattagtcgttgcttcact 13880707  T
Q  137 ctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc-ct-acatctcctgatgaactacaacttctggtta 234  Q
    |||  ||||||||||||||| ||| || |||||||||  ||||||||||||||||||||||| || ||  | ||| |||||||  | ||||| ||| | |    
T  13880708 cttctagtcttctgcaatgc-taggcgtgattaaatcttttgaacagcctttgaagctttaattctctctcctcttctgatgatgttcaactcctgatga 13880806  T
Q  235 tcttcagcttcttatga-gatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgct 333  Q
        | ||||||  ||| | |||||||||||||||||||||||||||||| ||||  |||||| |||  ||| |||||  |  |||  | ||||||||||    
T  13880807 aaaactgcttctagtgatgttgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac--ttgacttcataaccacttttcttcagatgct 13880904  T
Q  334 tcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  13880905 tcaagcttccttcttgttgattccattgctctcatttgttcttccagaacct 13880956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 315
Target Start/End: Original strand, 4821466 - 4821768
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||| | || |||  || ||||||||||||||||||||||||||    
T  4821466 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaa 4821565  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||| ||||| | |||| ||  ||||||||| |||  ||||||||| || |||   || |||||| |||||||||||||||  |  ||||    
T  4821566 tc-tttcaaaatagccgttgctccacttttctagtcttctgtaatctttagacgagtttgaatttgttaaacagcttttgaagctttaagt--tgtatct 4821662  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    || |||||||| || |||||||| || |||||||||| | | |  |||||||||||| ||||||| ||||||||| ||||  |||||| ||| |||||||    
T  4821663 ccggatgaactgcagcttctggtgattttcagcttctgacgaacttgcttctgatgaccttgcttttgatgacgtcatcacttcaggagcac-tttgtct 4821761  T
Q  309 tcaggag 315  Q
    |||||||    
T  4821762 tcaggag 4821768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 16112050 - 16111860
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| || |||  || |||||||||||||||||||||||||     
T  16112050 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaat 16111951  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagt 200  Q
    |  || ||||| |||||||| |||||| |||| |||||||||| |  ||||||||| || |||||||  |||| | |||||||||||||||    
T  16111950 ttcttccaaaaaagtcgttgcttcactttttccgtcttctgcactctttagacgaggttgaatccataaaacaacttttgaagctttaagt 16111860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 16310073 - 16309961
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| || ||| ||| ||||||||||||||||||||||||||    
T  16310073 agcagagacacaaactgagtagtgtagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 16309974  T
Q  110 tcatttcaaaata 122  Q
    || ||||||||||    
T  16309973 tcctttcaaaata 16309961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 45 - 251
Target Start/End: Complemental strand, 16543152 - 16542947
Alignment:
Q  45 ttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcag 143  Q
    |||||||| ||||||||  ||||||||| | |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||    
T  16543152 ttgtacacatcgtacaaacgtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccag 16543053  T
Q  144 tcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagct 243  Q
    |||||||||||  ||| ||||| || |||||||| |||||| |||||||| ||| ||  | |||||||||||||||| || ||| |||| || ||||| |    
T  16543052 tcttctgcaatcattaaacgagtttgaatccattaaacagcttttgaagcattatgt--tgcatctcctgatgaactgcagcttatggtgattttcagtt 16542955  T
Q  244 tcttatga 251  Q
    ||| ||||    
T  16542954 tctgatga 16542947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 45 - 251
Target Start/End: Original strand, 16622510 - 16622715
Alignment:
Q  45 ttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcag 143  Q
    |||||||| ||||||||  ||||||||| | |||| ||  |||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||    
T  16622510 ttgtacacatcgtacaaacgtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccag 16622609  T
Q  144 tcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagct 243  Q
    |||||||||||  ||| ||||| || |||||||| |||||| |||||||| ||| ||  | |||||||||||||||| || ||| |||| || ||||| |    
T  16622610 tcttctgcaatcattaaacgagtttgaatccattaaacagcttttgaagcattatgt--tgcatctcctgatgaactgcagcttatggtgattttcagtt 16622707  T
Q  244 tcttatga 251  Q
    ||| ||||    
T  16622708 tctgatga 16622715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 147
Target Start/End: Original strand, 14193108 - 14193243
Alignment:
Q  13 cagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatc 111  Q
    |||||||| |||| ||||||| ||| |||||||||||||||||||||| |||||||||||||| ||| ||  |||||||||||| |||||||||||||||    
T  14193108 cagagacaaaaacagagtagtagaggtagtggttgtacacttcgtacacttgtactttgttaacgctctttgaagaacaagcattcaatgccttcaaatc 14193207  T
Q  112 atttcaaaatagtcgttgtttcactctttcagtctt 147  Q
     ||||||||||||||||| ||||||||| |||||||    
T  14193208 ctttcaaaatagtcgttgcttcactcttccagtctt 14193243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 39 - 315
Target Start/End: Complemental strand, 12174479 - 12174203
Alignment:
Q  39 tagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcact 136  Q
    |||||||||||||||||||||||  ||||||||| || ||| ||   | ||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  12174479 tagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtcgttgcttcact 12174380  T
Q  137 ctttcagtcttctgcaatgcttagacgagattaaat-ccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttat 235  Q
     || |||||||||||||| |||||||||| || ||| ||||  |||||| |||||||| ||||||  | ||||  |||||||||| || |||||||| ||    
T  12174379 tttccagtcttctgcaatccttagacgaggttgaatcccataaaacagcttttgaagc-ttaagt--tgcatcctctgatgaactgcagcttctggtgat 12174283  T
Q  236 cttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
     || ||||||| ||  |  ||||||||||||||| |||| ||||||||| ||||  |||||| ||| | ||||||||||||    
T  12174282 ttttagcttctgataaacttgcttctgatgaactcgcttttgatgacgtcatcacttcaggagcac-tatgtcttcaggag 12174203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 251
Target Start/End: Complemental strand, 2265674 - 2265446
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| ||| ||||||| |||||||||||||||||||||||  ||||| ||| || ||| ||  ||||| ||||||  ||| |||||||||| || |||||    
T  2265674 aaacagagcagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcattaaataccttcaaatccttccaaaa 2265575  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaact 220  Q
    ||| ||||| |  ||| |||||||||||||||||  ||||||||| || ||||  || |||||| ||| |||||||||||  | ||||||||||||||||    
T  2265574 tagccgttgctatactttttcagtcttctgcaatctttagacgagtttgaatctgttaaacagcttttaaagctttaagt--tgcatctcctgatgaact 2265477  T
Q  221 acaacttctggttatcttcagcttcttatga 251  Q
    |||||||||||| ||  ||||||||| ||||    
T  2265476 acaacttctggtgattctcagcttctgatga 2265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 84 - 234
Target Start/End: Complemental strand, 15704591 - 15704443
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    ||||| |||||||||||||||||||||| || |||||||||||||| |  ||| || ||||||||||||||  ||||||||| || ||||| || |||||    
T  15704591 aagaataagcatccaatgccttcaaatccttccaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacag 15704492  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggtta 234  Q
    | |||||||||||||||  | ||||| ||||||||||||||||||||||||    
T  15704491 cttttgaagctttaagt--ttcatcttctgatgaactacaacttctggtta 15704443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 255 - 385
Target Start/End: Original strand, 13648935 - 13649065
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgat 354  Q
    ||||||| ||| ||||||||||||||||| ||||  |||||| |||||||||||||||||| ||| || |||||| || | || ||||||||||||||||    
T  13648935 gcttctgttgatcttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaaacttcctttttgttgat 13649034  T
Q  355 tccattactctcttttgttcttccagaacct 385  Q
    ||| || |||||||||||||||| |||||||    
T  13649035 tcctttgctctcttttgttcttctagaacct 13649065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 13894162 - 13893958
Alignment:
Q  12 gcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaat 110  Q
    ||||||||| |||| ||||||||||| |||||||||||||| | |||||||||| |||| | || ||| || || |||||| ||| ||||||||||||||    
T  13894162 gcagagaca-aaacagagtagtggaggtagtggttgtacacgttgtacaattgtcctttttcaatgctttttaaagaacaaacattcaatgccttcaaat 13894064  T
Q  111 catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctc 210  Q
    | |||  || ||| ||||| |||||||||   |||||||||||||| ||| || |||||||||| ||||||| |||||||||||||||||  | |||||     
T  13894063 ccttttgaattagccgttgcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcctttgaacaacctttgaagctttaagtatttcatctt 13893965  T
Q  211 ctgatga 217  Q
    |||||||    
T  13893964 ctgatga 13893958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 4494625 - 4494718
Alignment:
Q  137 ctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctg 230  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||| || ||||||    
T  4494625 ctttaagttttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctg 4494718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 238
Target Start/End: Complemental strand, 41842439 - 41842212
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagc-tgttcaagaacaagcatccaatgccttcaa- 108  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||| || ||   || || |||||| |||||||| ||||||     
T  41842439 agcagagacacaaactgagtagtgcaggtagtggttgtacacttcgtacaattgtactctgtcaacgcactttaaaaaacaagtatccaatgtcttcaac 41842340  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
     ||||||  || ||||||||| ||||||||     |||| |||| |||||||||||||| ||||| | |||||| |||||||||| |||||||   ||||    
T  41842339 ttcattt-gaattagtcgttgcttcactctcctgatcttatgcagtgcttagacgagatcaaatcaaatgaacaacctttgaagc-ttaagtctctcatc 41842242  T
Q  209 tcctgatgaactacaacttctggttatctt 238  Q
    | |||||||||| || |||||||| |||||    
T  41842241 ttctgatgaacttcagcttctggtgatctt 41842212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 48800516 - 48800433
Alignment:
Q  302 tttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| ||||||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48800516 tttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 48800433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 19711176 - 19711060
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| |||||||||| ||||||||||||||||||||||||  ||||||||| || |||  || ||| | ||||||||||||||||||||||     
T  19711176 agagacaaaaacagagtagtggaaatagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaaggataagcatccaatgccttcaaatcc 19711077  T
Q  113 tttcaaaatagtcgttg 129  Q
    ||||||| |||||||||    
T  19711076 tttcaaattagtcgttg 19711060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 303
Target Start/End: Original strand, 8182922 - 8183213
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||   ||| | ||| || |||  || ||||| ||||||| | || |||  ||    
T  8182922 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacagacgtattatgtcaacgctctttgaagaataagcatcaagtgtctttcaa 8183021  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |  ||| || |||||||||||||| |||||||||| || || |  ||  ||| | ||| ||||||| |||  | |||||    
T  8183022 tcctttcaaaatagttgttgctatacttttccagtcttctgcaat-cttagacgagtttgaaacttttatacaactttttaagctttgagt--tgcatct 8183118  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 303  Q
    ||||||||||| || |||||||| ||   |||||| | ||| |  ||||||| |||||||||||||||||||||| ||||  |||||| ||||||    
T  8183119 cctgatgaactgcagcttctggtgattcacagcttttgatgaacttgcttctaatgaacttgcttctgatgacgtcatcacttcaggagcacttt 8183213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 13137799 - 13137716
Alignment:
Q  302 tttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| ||||||||| ||| || |||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  13137799 tttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattccttacctctcttttgttcttccagaacct 13137716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 13472665 - 13472555
Alignment:
Q  91 agcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttg 189  Q
    |||||| |||||| ||||||| |||||||||||| |||| |||||||||    |||||| |||||||||||||||||||||||||||||||| || |||     
T  13472665 agcatcaaatgccatcaaatcctttcaaaatagttgttgcttcactcttatgatcttctacaatgcttagacgagattaaatccattgaacaacctttta 13472566  T
Q  190 aagctttaagt 200  Q
    |||||||||||    
T  13472565 aagctttaagt 13472555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 269 - 385
Target Start/End: Original strand, 4494725 - 4494839
Alignment:
Q  269 tgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctctt 368  Q
    ||||||||||||||| ||||  |||||| |||| |   ||||||||| ||| || || ||||||||||||||||||||||||||||| |||| |||||||    
T  4494725 tgcttctgatgacgtcatcacttcaggagcactata--cttcaggagcacttctctttagatgcttcaagcttcctttttgttgatttcattgctctctt 4494822  T
Q  369 ttgttcttccagaacct 385  Q
    | |||||||||||||||    
T  4494823 tcgttcttccagaacct 4494839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 379
Target Start/End: Original strand, 14426752 - 14426874
Alignment:
Q  256 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgatt 355  Q
    |||||||||||||||||||||||||||| | ||  |||||| |||||| ||||||||||| | |  | |||||| |||| ||||||||||||||||||||    
T  14426752 cttctgatgaacttgcttctgatgacgtcaccacttcaggagcacttt-gtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgatt 14426850  T
Q  356 ccattactctcttttgttcttcca 379  Q
    || || |||| | |||||||||||    
T  14426851 cctttgctctttattgttcttcca 14426874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 385
Target Start/End: Complemental strand, 13032213 - 13031879
Alignment:
Q  36 agatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaa-atcatttcaaaatagtcgttgtttc 133  Q
    |||||||||||||||||||||||||||| |||||||| || ||| ||||| || | |||||| |||| ||||||  ||||||  ||||||| |||| |||    
T  13032213 agatagtggttgtacacttcgtacaattatactttgtcaacgctcttcaaaaagccagcatctaatgtcttcaacttcattt-gaaatagttgttgcttc 13032115  T
Q  134 actctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatctcctgatgaactacaacttctggt 232  Q
    |||||    |||||||||||| | ||| || |||||||||||||||||| || ||||||||||||||||             | | || || ||| ||||    
T  13032114 actctcctggtcttctgcaatac-taggcgtgattaaatccattgaacaaccatttgaagctttaagtc-------------tcatcttcagcttatggt 13032029  T
Q  233 tatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgc 332  Q
     |||||| |||||| ||||| || ||||  ||||||||||||||||||||| || |   ||||| |||  |   ||||||||| |||  | |||||| ||    
T  13032028 gatcttctgcttctgatgaggtgtttctagtgaacttgcttctgatgacgtcattaatccaggagcac--taaacttcaggagcacttttcttcagacgc 13031931  T
Q  333 ttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||| |  |||||||||||||| ||||| ||||||||||||||||||    
T  13031930 ttcaagcttcatccttgttgattccattgctctc-tttgttcttccagaacct 13031879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 248 - 382
Target Start/End: Complemental strand, 9098172 - 9098040
Alignment:
Q  248 atgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttt 347  Q
    ||||| ||||||| |||||||||||||||||||| | ||||  |||||| |||||  | |||||| |   ||  | |||||||||||||||||||| | |    
T  9098172 atgaggtgcttctaatgaacttgcttctgatgacatcatcacttcaggagcactt--gacttcagaacctcttttcttcagatgcttcaagcttccatct 9098075  T
Q  348 tgttgattccattactctcttttgttcttccagaa 382  Q
    ||||||||||||| ||||| |||||||||||||||    
T  9098074 tgttgattccattgctctcatttgttcttccagaa 9098040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 1293025 - 1293117
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgcctt 105  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||||||||||||||||    
T  1293025 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 1293117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 21695684 - 21695736
Alignment:
Q  333 ttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  21695684 ttcaagcttcctttttgttgattccttaactctcttttgttcttccagaacct 21695736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 16316446 - 16316368
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||| ||| || || ||| ||||||||||||||||||||||||||| |  ||||||||||||||| ||||||||    
T  16316446 cttcaggagcacttctctttagacgcttcaagcttcctttttgttgattccttagctctcttttgttctttcagaacct 16316368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 385
Target Start/End: Complemental strand, 19236947 - 19236804
Alignment:
Q  241 gcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagct 340  Q
    |||||| ||||| || |||||| |||||||||||||||||||| ||||  |||| | |||||  | |||||  |  |||  | ||||||||||||| |||    
T  19236947 gcttctgatgaggtggttctgacgaacttgcttctgatgacgtcatcacttcagaagcactt--gacttcaaaatcactattcttcagatgcttcaggct 19236850  T
Q  341 tcctttttgttgattccattactc-tcttttgttcttccagaacct 385  Q
    ||||||||||||||||||| |||| |  ||||||||||||||||||    
T  19236849 tcctttttgttgattccataactcttaatttgttcttccagaacct 19236804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 377
Target Start/End: Complemental strand, 30945310 - 30945189
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgat 354  Q
    ||||||||||||||||||||||||||||| | ||  |||||| ||| |||||||||||||| | |  | |||||| | || ||||||||||||||||||     
T  30945310 gcttctgatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtcttcaggagcagttttcttcagacgttttaagcttcctttttgttgac 30945212  T
Q  355 tccattactctcttttgttcttc 377  Q
    ||  || |||| |||||||||||    
T  30945211 tcatttgctcttttttgttcttc 30945189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 302
Target Start/End: Complemental strand, 48062986 - 48062704
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||| |||||||||||||||||| ||||||||||  ||||| ||| || |||  || ||||| ||||||||||||||          
T  48062986 agcagagacagaaacagagtaatggagatagtggttgtacgcttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcc------ 48062893  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
       |||||||||||||||||    ||| || ||||||||  ||||   ||| |||| || ||| | |  |||| | |||||||||||||||  | |||||    
T  48062892 ---tttcaaaatagtcgttgccatacttttccagtcttcgacaatttctaggcgagtttgaattcttgaaacaacttttgaagctttaagt--tgcatct 48062798  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactt 302  Q
    | ||||||||| || |||||||| ||   |||||||| || ||  |||||||||||||||||||||||||| ||| ||||  |||||| |||||    
T  48062797 cttgatgaactgcagcttctggtgatacacagcttctgatggacttgcttctgatgaacttgcttctgatggcgtcatcacttcaggagcactt 48062704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 13303045 - 13303122
Alignment:
Q  225 cttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactt 302  Q
    |||||| | ||||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||  |||||| |||||    
T  13303045 cttctgatgatcttcagcttctgatgagatgcttctgatgaagttgcttctaatgacgtcatcacttcaggagcactt 13303122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 13890799 - 13890738
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||||||| |||||||||||||| || || |||||||| |||||||||    
T  13890799 ttcagatgcttcaagcttccttcttgttgattccattgctttcatttgttctcccagaacct 13890738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 4494569 - 4494628
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtacttt 70  Q
    |||||||||| |||  ||||||||||| ||| ||||||||||||||||||||||||||||    
T  4494569 agcagagacaaaaagagagtagtggaggtagcggttgtacacttcgtacaattgtacttt 4494628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 41842177 - 41842098
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctc-ttttgttcttccagaacct 385  Q
    ||||||||| |||  | ||||||||| |||||||||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  41842177 cttcaggagcacttttcttcagatgcatcaagcttcctttttgttgattccataactctcaatttgttctttcagaacct 41842098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 9098384 - 9098282
Alignment:
Q  39 tagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactc 137  Q
    ||||||||||||||||||||||||||| |||| | || ||| ||| |||||||| |||| ||||| |||||||| |||  || ||| ||||| |||||||    
T  9098384 tagtggttgtacacttcgtacaattgtcctttttcaacgctcttcaaagaacaaacatctaatgcattcaaatccttttgaattagccgttgcttcactc 9098285  T
Q  138 ttt 140  Q
    |||    
T  9098284 ttt 9098282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 27871710 - 27871760
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  27871710 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaa 27871760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 379
Target Start/End: Complemental strand, 9709739 - 9709631
Alignment:
Q  270 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttt 369  Q
    |||||||||||||| | ||  |||||| |||||| ||||||||||| | |  | |||||| |||| |||||||||||||||||||||  || |||||| |    
T  9709739 gcttctgatgacgtcaccacttcaggagcacttt-gtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcatttgctctctat 9709641  T
Q  370 tgttcttcca 379  Q
    ||||||||||    
T  9709640 tgttcttcca 9709631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 13730547 - 13730502
Alignment:
Q  340 ttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  13730547 ttcctttttgttgattcctttgctctcttttgttcttccagaacct 13730502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 14425444 - 14425489
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||    
T  14425444 agacaaaaacagagtagtggagatagtggttgtacacttcgtacaa 14425489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 24788381 - 24788450
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttctt 376  Q
    ||||||||| ||| || |||||||||||||||||||| ||||||||||||  || |||||||||| ||||    
T  24788381 cttcaggagcacttctcttcagatgcttcaagcttccattttgttgattcatttgctctcttttggtctt 24788450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 29935219 - 29935170
Alignment:
Q  336 aagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  29935219 aagcttcctttttgttgattccttagctctcttttgttcttccagaacct 29935170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 357
Target Start/End: Complemental strand, 5000782 - 5000675
Alignment:
Q  249 tgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttt 348  Q
    ||||||||||||||  | ||||||||||||||| |  |||  |||||| |||||| | ||||||||  ||| || |||||||| ||||| ||||||||||    
T  5000782 tgagatgcttctgacaatcttgcttctgatgacatcgtcacttcaggagcacttt-gacttcaggatcacttctcttcagatgtttcaaacttccttttt 5000684  T
Q  349 gttgattcc 357  Q
    |||||||||    
T  5000683 gttgattcc 5000675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 13303109 - 13303187
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||| ||| || |||||| |||| || |||| |||||||||||| | || |||||||||||||||||| |||||    
T  13303109 cttcaggagcacttctcttcagacgctttaaacttcttttttgttgatttctttgctctcttttgttcttccataacct 13303187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 16556730 - 16556664
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctg 150  Q
    |||||||||||  ||||||||| ||||| ||||||||||| ||||| |||||| || ||||||||||    
T  16556730 aagaacaagcaatcaatgccttaaaatcctttcaaaatagccgttgcttcacttttccagtcttctg 16556664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 16608932 - 16608998
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctg 150  Q
    |||||||||||  ||||||||| ||||| ||||||||||| ||||| |||||| || ||||||||||    
T  16608932 aagaacaagcaatcaatgccttaaaatcctttcaaaatagccgttgcttcacttttccagtcttctg 16608998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 24794881 - 24794831
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  24794881 agcagagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaa 24794831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 384
Target Start/End: Original strand, 331956 - 332015
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacc 384  Q
    ||||||||||| |||||||||||| |||| |||| |  |||||||||||||||||||||||    
T  331956 ttcagatgctttaagcttcctttt-gttgtttccttagctctcttttgttcttccagaacc 332015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 1293185 - 1293244
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||||||||||||||||||||||| |||| ||||  |||||| ||| ||||||||||||||    
T  1293185 gcttctgatgaacttgcttctgataacgtcatcacttcaggagcac-tttgtcttcaggag 1293244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 7339821 - 7339762
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||||||||||| | ||  |||||| ||| ||||||||||||||    
T  7339821 gcttctgatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtcttcaggag 7339762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 19339400 - 19339324
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgc 102  Q
    ||||||||||| |||||||||||||||||||||||  ||||| ||| || |||  || ||||| |||||||||||||    
T  19339400 gagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 19339324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 48236780 - 48236732
Alignment:
Q  331 gcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||| |||||||||||||||||||||| ||||||| | |||||||||||    
T  48236780 gctttaagcttcctttttgttgattcctttactctttattgttcttcca 48236732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 7339893 - 7339821
Alignment:
Q  157 ttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctgg 231  Q
    ||||||||| ||||||||||| ||||   |||||||||||||||  | |||||||||||||||| || |||||||    
T  7339893 ttagacgagtttaaatccattaaacaatttttgaagctttaagt--tgcatctcctgatgaactgcagcttctgg 7339821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 16111736 - 16111681
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||||| |||| |||||||||||||||||||||| || |||| | |||||||||||    
T  16111736 ttcagacgctttaagcttcctttttgttgattccttttctctttattgttcttcca 16111681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 289
Target Start/End: Complemental strand, 19711031 - 19710899
Alignment:
Q  157 ttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagat- 254  Q
    ||||||||| || |||||||| ||||||  |||||| ||||| ||  | ||||| |||||||||||||  ||||||| || | ||| |||| |||| ||     
T  19711031 ttagacgagtttgaatccattaaacagctatttgaaactttaggt--tgcatcttctgatgaactacagtttctggtgatatacagtttctgatgaaata 19710934  T
Q  255 gcttctgatgaacttgcttctgatgacgttatcag 289  Q
    |||||||||  |||||||||||||||||| |||||    
T  19710933 gcttctgatagacttgcttctgatgacgtcatcag 19710899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 23279879 - 23279832
Alignment:
Q  338 gcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||||  || |||||| |||||||||||||||||    
T  23279879 gcttcctttttgttgattcttttgctctctattgttcttccagaacct 23279832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 35952524 - 35952469
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||||| |||| |||||||||||||||||||||| || |||| | |||||||||||    
T  35952524 ttcagacgctttaagcttcctttttgttgattcctttgctctttattgttcttcca 35952469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 39284466 - 39284387
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactc-tcttttgttcttccagaacct 385  Q
    ||||||||| |||  | ||||||  ||||||||||||||||||||||||||||  ||| |  ||||||||||||||||||    
T  39284466 cttcaggagtacttttcttcagacacttcaagcttcctttttgttgattccatatctcttaatttgttcttccagaacct 39284387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 13172239 - 13172189
Alignment:
Q  335 caagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||||| | || ||| ||||| ||||||||||||||||||    
T  13172239 caagcttcctttttgttaactctattgctctcatttgttcttccagaacct 13172189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 377
Target Start/End: Complemental strand, 30944277 - 30944156
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgat 354  Q
    ||||||||||||| ||||||||||| | | | ||  |||||| |||||| ||||||||||| | |  | |||| | |||| |||||||||||||||||||    
T  30944277 gcttctgatgaacgtgcttctgatggcttcaccacttcaggagcacttt-gtcttcaggagcagttttcttcaaacgctttaagcttcctttttgttgat 30944179  T
Q  355 tccattactctcttttgttcttc 377  Q
    ||  || |||| | |||||||||    
T  30944178 tcatttgctctttattgttcttc 30944156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 14745787 - 14745750
Alignment:
Q  17 gacacaaactgagtagtggagatagtggttgtacactt 54  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  14745787 gacaaaaacagagtagtggagatagtggttgtacactt 14745750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 5826185 - 5826244
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||||||||| | || |  |||||| ||| ||||||||||||||    
T  5826185 gcttctgatgaacttgcttctgatgacttcattacttcaggagcac-tttgtcttcaggag 5826244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 19339196 - 19339137
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||||| ||||| ||||  |||| | ||| ||||||||||||||    
T  19339196 gcttctgatgaacttgcttctgaggacgtcatcacttcagaagcac-tttgtcttcaggag 19339137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 19710853 - 19710797
Alignment:
Q  324 ttcagatgcttcaagcttc-ctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||||| | ||||| ||||||||||||||  || ||||||||||||||||||    
T  19710853 ttcagatgctttaggcttctctttttgttgattcatttgctctcttttgttcttcca 19710797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 21692543 - 21692595
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttctt 376  Q
    |||||| |||||||||||| ||| |||||||| | | ||||||||||||||||    
T  21692543 ttcagacgcttcaagcttcttttatgttgatttcttaactctcttttgttctt 21692595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 27871931 - 27871959
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgt 283  Q
    |||||||||||||||||||||||||||||    
T  27871931 gcttctgatgaacttgcttctgatgacgt 27871959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 33 - 385
Target Start/End: Complemental strand, 5040 - 4688
Alignment:
Q  33 tggagatagtggttgtacacttcgtacaattgtactttgttaaagctgt-tcaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtt 131  Q
    ||||| ||||||||||||||||| |||||||||||||||| || ||| | | |||||||| ||||||||||||||||||| ||||||||||||||| | |    
T  5040 tggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctataaagaacaaacatccaatgccttcaaatcctttcaaaatagtcgtcgct 4941  T
Q  132 tcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctgg 231  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| | |||||||    
T  4940 tcactctttcagtcttctacaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatcttctgatgaactagagcttctgg 4841  T
Q  232 ttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatg 331  Q
    | ||||||||||| | |||||||||||||||||||||||||||||||||| | ||||  |||||| ||| |||| ||||||||| ||| || ||||||||    
T  4840 tgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacatcatcacttcaggagcac-tttgacttcaggagcacttctcttcagatg 4742  T
Q  332 cttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||||||||||||||||||| || ||||||||||||||||||||||||    
T  4741 cttcaaacttcctttttgttgattcctttgctctcttttgttcttccagaacct 4688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 45833384 - 45833759
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| || || ||| ||||||||||||| ||||||    
T  45833384 agcagagaccaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaaaaagcatccaatgcattcaaa 45833483  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |  |||||||||||  |||| || |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  45833484 tactttcaaaatagaagttgcttaactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 45833583  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||| | |||||||| ||||| ||||||| ||||||||||| |||| ||||||||||||||||||| ||||  ||| || ||||||||||||    
T  45833584 cctgatgaactagagcttctggtgatctttagcttctgatgagatgcttatgataaacttgcttctgatgacgtcatcacttcaagagcacttttgtctt 45833683  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||  || || |||||||||||||||||||||||||||||||||  || |||||||||||||||||| |||||    
T  45833684 caggagcgcttcttttcagatgcttcaagcttcctttttgttgattcgtttgctctcttttgttcttccaaaacct 45833759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 16632430 - 16632802
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||| || ||| ||||| ||||||| ||||||||||||||||    
T  16632430 agcagagacacaaactgattggtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagaatccaatgccttcaaa 16632529  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| | |||||    
T  16632530 tcttttcaaaatagtcgttgattcactcttccagtcttctgcaatgcttatacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 16632629  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||  | ||||| || |||||  |||||| ||||||||||| |||||| |||||||||||||  || ||||  |||| | ||| |||| |||    
T  16632630 cctgatgaactttagcttctagtgatctt--gcttctgatgagatgcttttgatgaccttgcttctgatggtgtcatcacttcagaagcac-tttgactt 16632726  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
     ||||| ||| || ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  16632727 taggagcacttctcttcagatgcttcaagcttcctttttgttgattccattgctctcttttgtttttccagaacct 16632802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 19 - 385
Target Start/End: Original strand, 12601099 - 12601464
Alignment:
Q  19 cacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttca 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||| |||||||||||||||||||||||||| |||||    
T  12601099 cacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttca 12601198  T
Q  118 aaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatga 217  Q
    |||||||||||| |||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||  |||||    
T  12601199 aaatagtcgttgattcactattcaagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgacgctttaagtcttgcatctcgagatga 12601298  T
Q  218 actacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaa 317  Q
     ||  ||||||| || |||||  |||||| ||||||||||||| |||||  ||||| ||||||| | ||||  |||||| |||||||||||| ||||  |    
T  12601299 gctttaacttctagtgatctt--gcttctgatgagatgcttcttatgaaaatgcttttgatgacatcatcacttcaggagcacttttgtcttaaggaaca 12601396  T
Q  318 ctgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    || || ||||||||| | |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  12601397 cttctcttcagatgccttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 12601464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 12811296 - 12810942
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaacaagcatccaatgccttcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||  ||||||||||||||||||||||||||    
T  12811296 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattttactttgtcaacgctatt--agaacaagcatccaatgccttcaaat 12811199  T
Q  111 catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctc 210  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| | ||||||    
T  12811198 cctttcaaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgaaactaaatccattgaacaacctttgaagctttaagtcttgcatctc 12811099  T
Q  211 ctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttc 310  Q
    || |||||||| | |||||||| ||||||  || || |||||||||||||||||||||||||| ||||||||||||||                  ||||    
T  12811098 ctaatgaactagagcttctggtgatcttctactactgatgagatgcttctgatgaacttgcttttgatgacgttatca------------------cttc 12811017  T
Q  311 aggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    || || ||| ||  ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12811016 agaagcacttctgctcagatgctacaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 12810942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 14605028 - 14604655
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||| ||||||    
T  14605028 agcatagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaa 14604929  T
Q  110 tcatttcaaaa-tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    || ||| |||| |||| |||| |||||||||  ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |  |||    
T  14604928 tccttttaaaaatagttgttgcttcactcttctagtcttctgcaatgcttagacgagattgaatccatagaatagcctttgaagctttaagtcttggatc 14604829  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    |||||||||| |  | |||||| | |||||  |||||| |||||||||||||||||||||||||||||||||||| || |  |||||| ||| |||| ||    
T  14604828 tcctgatgaagtttagcttctgatgatctt--gcttctgatgagatgcttctgatgaacttgcttctgatgacgtcattacttcaggagcac-tttgact 14604732  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||| ||| || |||||| | ||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  14604731 tcaggagcacttctcttcagacgtttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 14604655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 29680665 - 29680306
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||| ||||||    
T  29680665 agcagagacacatactgagtagtggagataatgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaa 29680566  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| | |||||    
T  29680565 tcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttggagctttaagtcttgcatct 29680466  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||| | ||||| | |||||||| ||||||||||||| ||||||||||||||               ||||||| ||||  |||||| ||| |||| |||    
T  29680465 cctggtaaactagagcttctggtgatcttcagcttctgatgagatgcttctg---------------atgacgtcatcacttcaggagcac-tttgactt 29680382  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||  ||| || ||||||| |||||||||||||||||||||||||| || |||||||||||||||| |||||||    
T  29680381 caggaacacttctcttcagatacttcaagcttcctttttgttgattcctttgctctcttttgttcttctagaacct 29680306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 37435656 - 37435269
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||  |||||||||| |||||||||||||||||||||||| ||||| ||| || ||| ||  ||||||||||||||||||||||||||    
T  37435656 agcagagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaatagtactatgtcaacgctctttgaagaacaagcatccaatgccttcaaa 37435557  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||||| || ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  37435556 tcctttcaaaatagtcgttgcttcactcttccaatcttctgcaatgcttggacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 37435457  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaa---------------cttgcttctgatgacgttatcagctcag 294  Q
    ||||||||||| || |||||||| |||||  || ||| |||||||||||||||||||               ||||||||||||||||| ||||  ||||    
T  37435456 cctgatgaacttcagcttctggtgatctt--gcctctgatgagatgcttctgatgaacttgcttctgatgaccttgcttctgatgacgtcatcacttcag 37435359  T
Q  295 gatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    || |||| ||  ||||||||| ||| || |||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  37435358 gagcactatt-acttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcatttgctctcttttgttcttccagaacct 37435269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 84 - 380
Target Start/End: Original strand, 14833460 - 14833751
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||| ||||||||     
T  14833460 aagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacat 14833559  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgt 283  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||  |||||||||||||     ||||||||| |||||| ||||||||||||| |    
T  14833560 cctttgaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttct-----gatgcttcttatgaacctgcttctgatgactt 14833654  T
Q  284 tatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccag 380  Q
    |||||  |||||| |||||||||||||||||| ||| |  ||||||||||||||| || ||||||||||||| | || |||||||||||||||||||    
T  14833655 tatcacttcaggagcacttttgtcttcaggagcacttcgcttcagatgcttcaagttttctttttgttgatttctttgctctcttttgttcttccag 14833751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 19884692 - 19884932
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  19884692 agcagagacaaaaacagattagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 19884791  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| | |||||    
T  19884792 tcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatcca-tgaacatcctttgaagctttaagtcttgcatct 19884890  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    |||||||||||||| |||||||| ||  ||||||||| ||||    
T  19884891 cctgatgaactacagcttctggtgattgtcagcttctgatga 19884932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 37985733 - 37985525
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||||||||||||||    
T  37985733 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 37985634  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||| |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||| | |||||    
T  37985633 tcctttcaaaatagttgttgcttcactttttcagtcttctgcgatgcttagatgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 37985534  T
Q  210 cctgatgaa 218  Q
    | |||||||    
T  37985533 catgatgaa 37985525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 14 - 385
Target Start/End: Original strand, 56034567 - 56034922
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||||| | ||||||||||||||||| |||||||| ||   ||||||||||||||| || ||| ||  |||||||| |||||||||||||||||| |    
T  56034567 agagacacatattgagtagtggagatagtagttgtacattttagacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatta 56034666  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||    
T  56034667 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttggacgagattaaatccattgaacagtctttgaagctttaagtcttgcatcttct 56034766  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcag 312  Q
    |||||||| || |||||||| ||||                ||||||||||||||||||||||||| |||| ||||  |||| | |||||||  ||||||    
T  56034767 gatgaacttcagcttctggtgatct----------------tgcttctgatgaacttgcttctgattacgtcatcacttcagaagcactttt-acttcag 56034849  T
Q  313 gagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||  |||  | |||||| ||||||||||| ||||||||||||||  || ||||||||||||||||||||||||    
T  56034850 gatcacttttcttcagacgcttcaagctttctttttgttgattcatttgctctcttttgttcttccagaacct 56034922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 3395580 - 3395816
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||| |||| |||||||||||| ||||||    
T  3395580 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaactagcatccaatgctttcaaa 3395679  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| ||||||| ||||||||||||||||||| ||| ||||||||||||| | ||||||| |||||||| | |||||    
T  3395680 tcctttcaaaatagtcgttgcttcactttttcagttttctgcaatgcttagacgatatttaatccattgaacaacttttgaagatttaagtcttgcatct 3395779  T
Q  210 cctgatgaactacaacttctggttatcttcagcttct 246  Q
    |||||||||||| | ||||| || ||||||| |||||    
T  3395780 cctgatgaactatagcttctagtgatcttcaacttct 3395816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 11 - 215
Target Start/End: Original strand, 19666362 - 19666567
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||| ||||||| || |||||| ||||||    
T  19666362 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaactctcttcaaagaacaagtattcaatgctttcaaa 19666461  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| | |||||    
T  19666462 tcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaataacctttcaagctttaagtcttgcatct 19666561  T
Q  210 cctgat 215  Q
    ||||||    
T  19666562 cctgat 19666567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 6641674 - 6642044
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||| ||||||||| ||| ||||||||||||    
T  6641674 agcagagacataaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagtatcaaatgccttcaaa 6641773  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||  || ||| |||||||||||||||    |||||| |||||| ||| |  |||||||||| ||||||| ||||||||||||||| ||   |||||    
T  6641774 tccttttgaattagccgttgtttcactcttctgatcttctacaatgc-taggcatgattaaatcctttgaacaacctttgaagctttaaatctctcatct 6641872  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
     |||||||| | || |||||||| || ||  |||||| ||||| |||||||||||||||||||| ||||||||| ||||  |||||| |||  ||| |||    
T  6641873 tctgatgaaattcagcttctggtgatatt--gcttctgatgaggtgcttctgatgaacttgcttatgatgacgtcatcacttcaggagcac--ttgactt 6641968  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| || ||   | |||||||||||||||||||||| ||||||| |||||| ||||| ||||||||||||||||||    
T  6641969 cagaagcacatttcttcagatgcttcaagcttccttcttgttgactccattgctctcatttgttcttccagaacct 6642044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 11 - 304
Target Start/End: Original strand, 40846089 - 40846383
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaaa 109  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| || |||||||||||||| |||||     
T  40846089 agcagagatacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccaatgctttcaac 40846188  T
Q  110 t-catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagccttt-gaagctttaagtcctacat 207  Q
    | ||||| ||  ||||||||| |||||| |    ||||||||||||||| || || |||||||||||||||||||||||| |||||||||||||   |||    
T  40846189 ttcatttgaat-tagtcgttgcttcactttcctggtcttctgcaatgct-aggcgtgattaaatccattgaacagccttttgaagctttaagtctctcat 40846286  T
Q  208 ctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactttt 304  Q
    || |||||||||| || |||| ||| ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||  |||||| |||||||    
T  40846287 cttctgatgaacttcagcttccggtgatcttcagcttctgatgagatgcttctgatgaacttgtttctgatgacgtcatcacttcaggagcactttt 40846383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 9140902 - 9141093
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||||||||||||||    
T  9140902 agcagagacacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 9141001  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc 201  Q
    || ||||||||||||||||| || ||| || ||||||||| |||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  9141002 tcctttcaaaatagtcgttgctttacttttccagtcttctacaatgcttagacgagattgaatccattgaacaacccttgaagctttaagtc 9141093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 14904477 - 14904246
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||| ||||||||| |||||||  |||||||||||||||||| ||| || ||| ||||| ||| |||||||||||| |||||||    
T  14904477 agcagagacacaaactgagtggtggagataatggttgtttacttcgtacaattgtactatgtcaacgctcttcaaagaataagcatccaatgtcttcaaa 14904378  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||| | ||||| |||||| || |||||||||||||||| ||||||||||||||||| ||||| ||| |||||||||||| ||| | |||||    
T  14904377 tcctttcaaaatggacgttgcttcacttttccagtcttctgcaatgcctagacgagattaaatcctttgaatagcttttgaagctttaggtcttgcatct 14904278  T
Q  210 cctgatgaactacaacttctggttatcttcag 241  Q
    ||||||||||||||||||||||| ||||||||    
T  14904277 cctgatgaactacaacttctggtgatcttcag 14904246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 19621182 - 19620962
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttca-agaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| || ||| |||| |||||||||||||||||| ||||||    
T  19621182 agcagagacacaaactgaatagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcatagaacaagcatccaatgctttcaaa 19621083  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| ||||||  |   ||||| |||||||||| ||||||||| ||||||||||||| ||||||||||||||| || | |||||    
T  19621082 tcctttcaaaatagtcgttgcttcacttctctggtcttttgcaatgcttggacgagattgaatccattgaacaacctttgaagctttaactcttgcatct 19620983  T
Q  210 cctgatgaactacaacttctg 230  Q
    ||||||||||| || ||||||    
T  19620982 cctgatgaacttcagcttctg 19620962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 39 - 251
Target Start/End: Original strand, 3483739 - 3483952
Alignment:
Q  39 tagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactc 137  Q
    |||||||||| | ||||||||||||||||||||| || ||| ||  ||||| |||||||||||||||||||||| ||||||||||||||||| ||||||     
T  3483739 tagtggttgtgcgcttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactt 3483838  T
Q  138 tttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatct 237  Q
    || |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| | |||||| | |||||||| |||||||||| ||||    
T  3483839 ttccagtcttctgcaatgcttagacgagattaaatccattgaatagtttttgaagctttaagtcttgcatctcttaatgaactataacttctggtgatct 3483938  T
Q  238 tcagcttcttatga 251  Q
    ||||||||| ||||    
T  3483939 tcagcttctgatga 3483952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 10072925 - 10073286
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||| ||||||||||| || ||| ||  || ||||||| |||||||||||||||    
T  10072925 agcagagacaaaaacatagtagtggagatagtggttgtacacttcgtacatttgtactttgtcaacgctctttgaataacaagcctccaatgccttcaaa 10073024  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| |||  |||| |||||| || ||||||||||| ||||||| ||||||||||||||| |||||| |||||||||||||||||| | |||||    
T  10073025 tcctttcaaactagcagttgcttcacttttccagtcttctgctatgcttaaacgagattaaatcca-tgaacaacctttgaagctttaagtcttgcatct 10073123  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||||  |||||||| || ||||||||||     | || || | |       |||||||||||| | | ||  |||||| ||| ||||||||    
T  10073124 cctgatgaactactgcttctggtaattttcagcttct-----ggtgattttca-------gcttctgatgacatcaccacttcaggagcac-tttgtctt 10073210  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| |||  | |||||| |||| |||||||||||||||||||||| || |||||| ||||||||||| |||||    
T  10073211 caggagcacttttcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccataacct 10073286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 230
Target Start/End: Original strand, 55380280 - 55380500
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||| ||||||||||||||||||| ||||||    
T  55380280 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaa 55380379  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatc 208  Q
    || |||||||||||| |||| |||||||||   ||||||||||||| |||| |  ||||||||||||||||||||| |||||||||||||||| | ||||    
T  55380380 tcctttcaaaatagttgttgcttcactcttctggtcttctgcaatg-ttaggcatgattaaatccattgaacagccttttgaagctttaagtcttgcatc 55380478  T
Q  209 tcctgatgaactacaacttctg 230  Q
    |||| ||||||| || ||||||    
T  55380479 tcctaatgaacttcagcttctg 55380500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 22675630 - 22675422
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| || ||| ||  ||||||||||||| |||||||||||||| |||||||     
T  22675630 aaactgagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaagcatcaaatgccttcaaatcctttcaaac 22675531  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaact 220  Q
    ||||||||| |||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | |||||||| |||||||    
T  22675530 tagtcgttgcttcacttttctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttatgt--tgcatctcctaatgaact 22675433  T
Q  221 acaacttctgg 231  Q
     || |||||||    
T  22675432 gcagcttctgg 22675422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 13576235 - 13575996
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||| ||||||  |||||||| ||||||||||||| ||||||| ||| || ||| ||  ||||||||||||| ||||||||||||    
T  13576235 agcagagacaaaaacagagcagtggatgtagtggttttacacttcgtacagttgtactatgtcaacgctctttgaagaacaagcatctaatgccttcaaa 13576136  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  | |||||    
T  13576135 tcctttcaaactaggcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaggctttgaagctttatgt--tgcatct 13576038  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||||||||| || |||||||| || |||||||||| ||||    
T  13576037 cctgatgaactgcagcttctggtgattttcagcttctgatga 13575996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 19912002 - 19911760
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaa 108  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| |||||||| |||| ||| || ||| ||   ||||| ||||||||||||| |||||    
T  19912002 agcagaggcacaaactgagtagtggaggtagtggttgtacactttgtacaattatactatgtcaacgctctttcaaagaataagcatccaatgctttcaa 19911903  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    ||| ||||||||||||||||| ||||||  |   ||||| |||||||||| ||||||||| |||| |||||||| ||||| |||||||||||| | ||||    
T  19911902 atcctttcaaaatagtcgttgcttcactgctctggtcttttgcaatgcttggacgagattgaatctattgaacaacctttaaagctttaagtcttgcatc 19911803  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    |||||||||||||||||||||| | ||||||||||||| ||||    
T  19911802 tcctgatgaactacaacttctgatgatcttcagcttctgatga 19911760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 22 - 281
Target Start/End: Original strand, 17247245 - 17247503
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||| || | | ||  |||||||| ||| ||||||||||||||| |||||||     
T  17247245 aaacagagtagtggaggcagtggttgtacacttcgtacaattgtactttgtcaatgttctttgaagaacaaacattcaatgccttcaaatcctttcaaat 17247344  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaact 220  Q
    ||||||||| |||||| || || ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||   | ||||||||||||||||    
T  17247345 tagtcgttgcttcact-ttccaatcttctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaag--attcatctcctgatgaact 17247441  T
Q  221 acaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgac 281  Q
     || |||||||| || |||||||||| ||| |  ||||||||||||||| ||||||||||||    
T  17247442 gcagcttctggtgattttcagcttctgatgaacttgcttctgatgaactcgcttctgatgac 17247503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 10692841 - 10693080
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||| |||||  ||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  10692841 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaa 10692940  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||| || ||||||||||||||  ||||||||| || ||||| || |||| | |||||||||||||||  | |||||    
T  10692941 tcctttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaagt--tgcatct 10693038  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    |||||||||||||| |||||||| ||  ||||||||| ||||    
T  10693039 cctgatgaactacagcttctggtgattctcagcttctgatga 10693080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 10906607 - 10906846
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||| |||||  ||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  10906607 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaa 10906706  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||| || ||||||||||||||  ||||||||| || ||||| || |||| | |||||||||||||||  | |||||    
T  10906707 tcctttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaagt--tgcatct 10906804  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    |||||||||||||| |||||||| ||  ||||||||| ||||    
T  10906805 cctgatgaactacagcttctggtgattctcagcttctgatga 10906846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 27 - 251
Target Start/End: Original strand, 413008 - 413231
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtc 125  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| || ||| ||  |||||||| ||| ||||||||||||||| ||||||| ||| |    
T  413008 gagtagtggaggcagtggttgtacacttcgtacaatcgtactttgtcaacgctctttgaagaacaaacattcaatgccttcaaatcctttcaaattagcc 413107  T
Q  126 gttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaac 225  Q
    |||| |||||| ||  ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||  |  ||||||||||||||| || |    
T  413108 gttgcttcacttttcgagtcttctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaagt--tgaatctcctgatgaactgcagc 413205  T
Q  226 ttctggttatcttcagcttcttatga 251  Q
    ||||||| || |||||||||| ||||    
T  413206 ttctggtgattttcagcttctgatga 413231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 29121362 - 29121550
Alignment:
Q  13 cagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatc 111  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| || || ||||||||||||| ||||||||||||    
T  29121362 cagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaacaagcatccagtgccttcaaatc 29121461  T
Q  112 atttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagt 200  Q
     ||||||||||||||||| |||||| |||||||||||||||||  ||||||||| || |||||||| |||||| |||||||| ||||||    
T  29121462 ctttcaaaatagtcgttgcttcactttttcagtcttctgcaatctttagacgaggttgaatccattaaacagcttttgaagccttaagt 29121550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 54679931 - 54680157
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||  |||||||| ||||||||||||||||||| ||||||||    
T  54679931 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaa 54680030  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaact 220  Q
    |||| |||| |||||| || ||||||||||||||  ||||||||| || |  ||||| |||||| |||||||||||||||  | ||||||||||||||||    
T  54680031 tagttgttgcttcacttttccagtcttctgcaatcattagacgagtttga--ccattaaacagcttttgaagctttaagt--tgcatctcctgatgaact 54680126  T
Q  221 acaacttctggttatcttcagcttcttatga 251  Q
     || |||||||| || |||||||||| ||||    
T  54680127 gcagcttctggtgattttcagcttctgatga 54680157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 117 - 261
Target Start/End: Original strand, 23123528 - 23123672
Alignment:
Q  117 aaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatg 216  Q
    ||||||||| ||| ||||||||||||||||||| |||| ||||||||||||||||| |||||||||  ||||||||||||||||| | ||||||||||||    
T  23123528 aaaatagtcattgcttcactctttcagtcttctacaatacttagacgagattaaattcattgaacaatctttgaagctttaagtcttgcatctcctgatg 23123627  T
Q  217 aactacaacttctggttatcttcagcttcttatgagatgcttctg 261  Q
    |||| || |||||||| |||||| |||||| ||||||||||||||    
T  23123628 aacttcagcttctggtgatcttctgcttctgatgagatgcttctg 23123672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 23750512 - 23750758
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttca--agaacaagcatccaatgccttcaa 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   | ||  ||||  | |||||||||| |||||||| ||    
T  23750512 agcagagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttg---acgcacttcataaaaacaagcatcaaatgcctttaa 23750608  T
Q  109 at-catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagccttt-gaagctttaagtcctaca 206  Q
     | ||||| ||   |||||||| ||||||||    |||||||||| |||| || || |||||||||||||||||| ||||| ||||||||||||| | ||    
T  23750609 cttcatttgaagc-agtcgttgcttcactctcctggtcttctgcagtgct-aggcgtgattaaatccattgaacaaccttttgaagctttaagtcttgca 23750706  T
Q  207 tctcctgatgaactacaacttctggttatcttcagcttcttatgagatgctt 258  Q
    |||||||||||||| || |||||||||||||| | ||||| |||||||||||    
T  23750707 tctcctgatgaacttcagcttctggttatctttaacttctgatgagatgctt 23750758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 6517475 - 6517714
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| |||||||  |||| ||| ||    
T  6517475 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatctcatgctttccaa 6517574  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || |||||||||||||| |  ||| || ||||||||||||||  ||||||||| || ||||| || || | | |||||||||||||||  | |||||    
T  6517575 tccttccaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcctttaaataacttttgaagctttaagt--tgcatct 6517672  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||||||||||||||||||||| ||  ||||||||| ||||    
T  6517673 cctgatgaactacaacttctggtgattctcagcttctgatga 6517714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 385
Target Start/End: Original strand, 15139296 - 15139592
Alignment:
Q  89 caagcatccaatgccttcaaat-catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctt 187  Q
    |||||||||||||||||||| | ||||| ||  ||||||||| ||||||||    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  15139296 caagcatccaatgccttcaacttcatttgaat-tagtcgttgcttcactctcctggtcttctgcaatgcttaaacgagattaaatccattgaacaacctt 15139394  T
Q  188 tgaagctttaagtcctacatctcctgatgaac-tacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttat 286  Q
    |||| |||||||||   ||||| ||||||||| |  | |||||||| ||||||||||||| | ||| ||||||| ||||||||||||| || ||| | ||    
T  15139395 tgaatctttaagtctatcatcttctgatgaacttttagcttctggtgatcttcagcttctgacgaggtgcttctaatgaacttgcttccgaagacatcat 15139494  T
Q  287 cagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactc-tcttttgttcttccagaacct 385  Q
    ||  ||  || |||  ||| ||| ||||| |||  | ||||  ||||| ||||||||||||||||||||||||  ||| |  ||||||||||||||||||    
T  15139495 cacttctagagcac--ttgacttaaggagcacttttcttcaattgcttaaagcttcctttttgttgattccatagctcttaatttgttcttccagaacct 15139592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 254 - 385
Target Start/End: Original strand, 9141095 - 9141226
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttga 353  Q
    ||||||||| |||||||| ||||||||||| ||||  |||||| |||||||||||||||||| ||| || |||||| || | ||||||||||||||||||    
T  9141095 tgcttctgaagaacttgcatctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaagcttcctttttgttga 9141194  T
Q  354 ttccattactctcttttgttcttccagaacct 385  Q
    |||| || |||||||||||||||||| |||||    
T  9141195 ttcctttgctctcttttgttcttccataacct 9141226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 8105628 - 8105819
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaa 108  Q
    |||||||||| |||| ||||||||||| ||||||||||||| |||||||||  ||||||||| || ||| ||   | ||||||||||||||||| |||||    
T  8105628 agcagagaca-aaacagagtagtggaggtagtggttgtacatttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaa 8105726  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaat-ccattgaacagcctttgaagctttaagt 200  Q
    ||| ||||||||||| ||||| |||| | || |||||||||||||| |||||||||  || ||| ||||| |||| | |||||||| ||||||    
T  8105727 atcctttcaaaatagccgttgcttcaattttccagtcttctgcaatccttagacgaagttgaatcccattaaacaacttttgaagccttaagt 8105819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 56533182 - 56532991
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttcaa 108  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||||||  ||||||||| || ||| ||   | |||||| |||| ||||| |||||    
T  56533182 agcagagaca-aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaaacatctaatgcattcaa 56533084  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaat-ccattgaacagcctttgaagctttaagt 200  Q
    ||| ||||||||||| ||||| |||| | ||||||||||||||||| |||||||||| || ||| ||||  |||||| |||||||| ||||||    
T  56533083 atcctttcaaaatagccgttgcttcattttttcagtcttctgcaatccttagacgaggttgaatcccataaaacagcttttgaagccttaagt 56532991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 385
Target Start/End: Complemental strand, 19620955 - 19620840
Alignment:
Q  269 tgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctctt 368  Q
    ||||||||||||||| ||||  ||||||||||||| | ||||||||| ||  || ||||||||||| |||||||||||||||||||||| || |||||||    
T  19620955 tgcttctgatgacgtcatcacttcaggatcacttt-gacttcaggagcacgtctcttcagatgctttaagcttcctttttgttgattcctttgctctctt 19620857  T
Q  369 ttgttcttccagaacct 385  Q
    |||||||||||||||||    
T  19620856 ttgttcttccagaacct 19620840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 3105540 - 3105323
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||   |||| ||| || |||  || ||||| || |||||||| | ||  ||    
T  3105540 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataaccatccaatacttttcaa 3105441  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||| |||||    ||| || |||||||||||||| |||||||||| || ||||| |  |||||| |||||||||||||||  | |||||    
T  3105440 tcctttcaaaatagccgttggaatacttttccagtcttctgcaat-cttagacgagtttgaatccttgaaacagcttttgaagctttaagt--tgcatct 3105344  T
Q  210 cctgatgaactacaacttctg 230  Q
    ||||||||||| || ||||||    
T  3105343 cctgatgaactgcagcttctg 3105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 195
Target Start/End: Original strand, 11915701 - 11915874
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| |||||||||||   |||||||||||||| |||||||||| ||||   || ||| ||||| ||| ||||||||||||||||||||||  ||  |||    
T  11915701 aaacagagtagtggaggcggtggttgtacactttgtacaattgtccttttccaacgctcttcaaagaataagcatccaatgccttcaaatccatttgaaa 11915800  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctt 195  Q
    ||||||||| |||||||||| ||||||||||||||  | | || |||||||||  |||| |||||||||||||||    
T  11915801 tagtcgttgcttcactcttttagtcttctgcaatg-atgggcgtgattaaatcatttgagcagcctttgaagctt 11915874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 177
Target Start/End: Original strand, 16940026 - 16940172
Alignment:
Q  31 agtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttg 129  Q
    |||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| |||||| |||||||||  |||| |||||||||||||||||    
T  16940026 agtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctccttgaagaataagcattcaatgcctttcaatcctttcaaaatagtcgttg 16940125  T
Q  130 tttcactctttcagtcttctgcaatgcttagacgagattaaatccatt 177  Q
     |  ||| || |||||||||||||| |||||||||| || ||||||||    
T  16940126 ctatacttttccagtcttctgcaat-cttagacgagtttgaatccatt 16940172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 84 - 279
Target Start/End: Original strand, 55731844 - 55732036
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    ||||| ||||||||||| |||||||||| ||||||||||||||||| || ||   | ||||||| ||||||  ||||||||| || |||||||| ||||     
T  55731844 aagaataagcatccaat-ccttcaaatcctttcaaaatagtcgttgatttacctctccagtcttttgcaattgttagacgagtttgaatccattaaacaa 55731942  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatg 279  Q
    | ||||||| |||||||  | |||||||||||||||| || |||| ||| ||  ||||||||| |  |  || ||||||||| |||||||||||||    
T  55731943 cttttgaagttttaagt--tgcatctcctgatgaactgcagcttccggtgattctcagcttctaaaaacttgtttctgatgaccttgcttctgatg 55732036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 17540721 - 17540782
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  17540721 ttcagatgcttcaagcttccttcttgttgattccattgctctcatttgttcttccagaacct 17540782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 3395906 - 3395989
Alignment:
Q  302 tttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| ||||||||| | | || |||||| |||| |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  3395906 tttgacttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttccagaacct 3395989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 17398795 - 17398585
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||||||||||||||          
T  17398795 agcagagacaaaaacagagtagtggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcc------ 17398702  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
       ||||||||||||||||| |  ||| || ||||||||||||||  |||| |||| || ||||| |  |||| | |||||||||||||||  | |||||    
T  17398701 ---tttcaaaatagtcgttgctatacttttccagtcttctgcaat-tttaggcgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatct 17398608  T
Q  210 cctgatgaactacaacttctggt 232  Q
    ||||||||||  || ||||||||    
T  17398607 cctgatgaaccgcagcttctggt 17398585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 16853493 - 16853594
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||| ||||  |||||||||| || |||  || | ||||||||||||||||| ||||||    
T  16853493 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcatacagatgtactttgtcaacgctctttgaggaacaagcatccaatgctttcaaa 16853592  T
Q  110 tc 111  Q
    ||    
T  16853593 tc 16853594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 302
Target Start/End: Original strand, 22089733 - 22089869
Alignment:
Q  165 gattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatg 264  Q
    |||||||||| ||||||| |||||||||||| || || | ||||| ||||||| ||  | |||||||| ||||||| ||||| ||||| | |||||||||    
T  22089733 gattaaatcctttgaacaacctttgaagctt-aattctttcatcttctgatgatctttagcttctggtgatcttcaacttctgatgaggtacttctgatg 22089831  T
Q  265 aacttgcttctgatgacgttatcagctcaggatcactt 302  Q
     |||||||||  ||||||||||||  |||||| |||||    
T  22089832 cacttgcttcgaatgacgttatcacttcaggagcactt 22089869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 25651224 - 25651084
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||| ||||||  |||||  || || ||| ||  ||||| |||||| |||||||||||||    
T  25651224 agcagagaca-aaacagagtagtggaggtagtggttgtacactttgtacaaacgtactacgtcaacgctctttgaagaataagcattcaatgccttcaaa 25651126  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgc 151  Q
    || || |||||||| ||||| |||||| ||  ||||||||||    
T  25651125 tccttccaaaatagccgttgcttcacttttcaagtcttctgc 25651084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 40846385 - 40846447
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctc-ttttgttcttccagaacct 385  Q
    |||||||||||||||||||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  40846385 ttcagatgcttcaagcttcctttttgttgattccataactctcaatttgttctttcagaacct 40846447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 384
Target Start/End: Original strand, 55380528 - 55380605
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacc 384  Q
    ||||||||| ||| || |||||| ||||||||||||||||||||||||||| |  |||||||||||| || |||||||    
T  55380528 cttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattccttagctctcttttgttttttcagaacc 55380605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 8685548 - 8685509
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgta 66  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8685548 gagtagtggagatagtggttgtacacttcgtacaattgta 8685509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 20977447 - 20977497
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  20977447 agcagagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaa 20977497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 379
Target Start/End: Complemental strand, 13576006 - 13575898
Alignment:
Q  270 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttt 369  Q
    |||||||||||||| | ||  |||||| |||||| ||||||||||| | |  | |||||| |||| |||||||||||||||||||||  || |||||| |    
T  13576006 gcttctgatgacgtcaccacttcaggagcacttt-gtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgattcatttgctctctat 13575908  T
Q  370 tgttcttcca 379  Q
    ||||||||||    
T  13575907 tgttcttcca 13575898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 17540396 - 17540560
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| |||||||||||||| |||||||||||||||||||||||| |||| | ||  || | ||| ||| | ||||||| || ||||| |||  |   ||     
T  17540396 aaacagagtagtggagataatggttgtacacttcgtacaattgtcctttttcaacactctccaacgaataggcatccactggcttcacatccatctgaat 17540495  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcct 186  Q
    |||| |||| |||| |||||||||||| |||||||  ||| ||||||||||||  |||||||||||    
T  17540496 tagttgttgcttcattctttcagtcttttgcaatg-ataggcgagattaaatcatttgaacagcct 17540560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 17787846 - 17787793
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    |||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||    
T  17787846 ttcagatgcttcaagcttccttcttgttgatttcattgctctcatttgttcttc 17787793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 41114562 - 41114501
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| ||||||||||||||||| | |||||||||||| ||||| |||||||||| |||||||    
T  41114562 ttcatatgcttcaagcttccttctcgttgattccattgctctcatttgttcttcgagaacct 41114501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 379
Target Start/End: Original strand, 54680147 - 54680255
Alignment:
Q  270 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttt 369  Q
    |||||||||||||| | ||  |||||| |||||| ||||||||||| | |  | |||||| |||| |||||||||||||||||||||| || |||| | |    
T  54680147 gcttctgatgacgtcaccacttcaggagcacttt-gtcttcaggagcaattttcttcagacgctttaagcttcctttttgttgattcctttgctctttat 54680245  T
Q  370 tgttcttcca 379  Q
    ||||||||||    
T  54680246 tgttcttcca 54680255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 14571243 - 14571302
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  14571243 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 14571302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 11901528 - 11901579
Alignment:
Q  334 tcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  11901528 tcaagcttcctttttgttaattccattgttctcatttgttcttccagaacct 11901579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 17788152 - 17788109
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtacttt 70  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  17788152 gagtagtggagatagtggttgtacacatcgtacaattgtccttt 17788109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 14154115 - 14154065
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| ||||||||||||  |||||||||||||||||||||    
T  14154115 agcagagacaaaaacagagtagtggagaaggtggttgtacacttcgtacaa 14154065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 22190836 - 22190886
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  22190836 agcagagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaa 22190886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 3497936 - 3497997
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| |||| |||||||||||||||||||||| || |||| | ||||||||||| |||||    
T  3497936 ttcagacgctttaagcttcctttttgttgattcctttgctctatattgttcttccaaaacct 3497997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 10693070 - 10693126
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcag 312  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||| |||||||||||    
T  10693070 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcag 10693126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 10906836 - 10906892
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcag 312  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||| |||||||||||    
T  10906836 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcag 10906892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 11916027 - 11916084
Alignment:
Q  328 gatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||| ||||||||| |||| ||||| ||| ||||| ||||||||    
T  11916027 gatgcttcaagcttccttcttgttgatttcattgctctcattttttctttcagaacct 11916084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 14904128 - 14904067
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| |||| ||||||| |||||||| ||||  || ||||||||||||||||||||||||    
T  14904128 ttcagacgctttaagcttcttttttgtttattcatttgctctcttttgttcttccagaacct 14904067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 38513868 - 38513925
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtact 68  Q
    |||||||||| |||| |||||||| |  |||||||||||||||||||||||| |||||    
T  38513868 agcagagacaaaaacagagtagtgaaagtagtggttgtacacttcgtacaatcgtact 38513925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 11901196 - 11901276
Alignment:
Q  30 tagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttca-agaacaagcatccaatgccttcaaa 109  Q
    ||||| |||||||| ||||||||||||||||||||| ||||  ||| | | | || |||| ||||||||||||||||||||    
T  11901196 tagtgtagatagtgattgtacacttcgtacaattgtccttttctaacgttctccagagaataagcatccaatgccttcaaa 11901276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 315
Target Start/End: Original strand, 8105889 - 8105947
Alignment:
Q  256 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||||||||||||||||||||||||| | ||||  |||||| ||| ||||||||||||||    
T  8105889 cttctgatgaacttgcttctgatgacatcatcacttcaggagcac-tttgtcttcaggag 8105947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 39419855 - 39419764
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaacaagcatccaatgc 102  Q
    |||||||||| |||| ||||| ||||  |||||||||||||||||||||||  ||||| ||| || ||| || |||||  |||||| |||||    
T  39419855 agcagagacaaaaacagagtaatggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgcttttgaagaattagcatcaaatgc 39419764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 1672395 - 1672429
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaa 61  Q
    ||||||||||| |||||||||||||||||||||||    
T  1672395 gagtagtggaggtagtggttgtacacttcgtacaa 1672429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 1674870 - 1674904
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaa 61  Q
    ||||||||||| |||||||||||||||||||||||    
T  1674870 gagtagtggaggtagtggttgtacacttcgtacaa 1674904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 9751661 - 9751615
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgt 57  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||    
T  9751661 agcagagacaaaaacagagtagtggaagtagtggttgtacacttcgt 9751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 6517704 - 6517737
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatca 288  Q
    ||||||||||||||||||||||||||||| ||||    
T  6517704 gcttctgatgaacttgcttctgatgacgtcatca 6517737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 288
Target Start/End: Complemental strand, 17398576 - 17398543
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatca 288  Q
    ||||||||||||||||||||||||||||| ||||    
T  17398576 gcttctgatgaacttgcttctgatgacgtcatca 17398543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 22191057 - 22191090
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatca 288  Q
    ||||||||||||||||||||||||||||| ||||    
T  22191057 gcttctgatgaacttgcttctgatgacgtcatca 22191090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 379
Target Start/End: Original strand, 29121608 - 29121732
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagctt-cctttttgttga 353  Q
    |||||||||||||||||| |||||||||  ||||  ||| || ||| |||||||||||| | | |  | |||||| | || |||||| ||||||||||||    
T  29121608 gcttctgatgaacttgctactgatgacgccatcacttcaagagcac-tttgtcttcaggtgcagttttcttcagacgttttaagcttccctttttgttga 29121706  T
Q  354 ttccattactctcttttgttcttcca 379  Q
    |||| || |||| | |||||||||||    
T  29121707 ttcctttgctctttattgttcttcca 29121732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 413221 - 413249
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgt 283  Q
    |||||||||||||||||||||||||||||    
T  413221 gcttctgatgaacttgcttctgatgacgt 413249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 3105329 - 3105270
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||| ||||||||| ||||  |||||| |||  |||||||||||||    
T  3105329 gcttctgatgaacttgcttttgatgacgtcatcacttcaggagcac-cttgtcttcaggag 3105270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 379
Target Start/End: Original strand, 19884969 - 19885048
Alignment:
Q  302 tttgtcttcaggagaactgctattcagatgcttcaagcttcctt--tttgttgattccattactctcttttgttcttcca 379  Q
    |||||||||||||| | |  | |||||| |||| ||||||||||  ||||||||||||||| |||||| || ||||||||    
T  19884969 tttgtcttcaggagcagttttcttcagacgctttaagcttccttggtttgttgattccattgctctctattattcttcca 19885048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 20977648 - 20977707
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||| ||||||||||||||||||||| ||||  |||| | ||| ||||||||||||||    
T  20977648 gcttctggtgaacttgcttctgatgacgtcatcacttcagaagcac-tttgtcttcaggag 20977707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 379
Target Start/End: Original strand, 33378757 - 33378793
Alignment:
Q  343 ctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||||||||| || ||||||||||||||||||    
T  33378757 ctttttgttgattcctttgctctcttttgttcttcca 33378793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 40860657 - 40860749
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgc 102  Q
    |||||||||| |||| ||||||||||  |||||||||||||| || |||||  ||||| ||| || |||  || ||||| |||||||||||||    
T  40860657 agcagagacaaaaacagagtagtggaagtagtggttgtacacatcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 40860749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 14 - 385
Target Start/End: Original strand, 474 - 845
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatca 112  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||||||||||||||||     
T  474 agagacacaacctgagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 573  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| | ||||||||    
T  574 tttcaaaatagtcgttgcttcactattccagtcttctgcaatgcttagacgagattaaatcaattgaacatcctttgacgctttaagtcttgcatctcct 673  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcag 312  Q
    ||||| ||  | |||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||  ||| || || ||||| |||||     
T  674 gatgagctttagcttctggtgatcttcagcttctgatgagatgcttctgataaacttgcttctgatgacgtcatcacttcatgagca-ttttgacttcaa 772  T
Q  313 gagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| ||| || ||||||||||| |||||||||||||||||||||| || |||||||||||| |||||||||||    
T  773 gagcacttctcttcagatgctttaagcttcctttttgttgattcctttgctctcttttgtttttccagaacct 845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 27 - 385
Target Start/End: Original strand, 13435544 - 13435902
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtc 125  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||| |||||| ||| |||||| |||||||| |||||||||||||    
T  13435544 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgcttttcaaagaacaatcattcaatgctttcaaatcctttcaaaatagtc 13435643  T
Q  126 gttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaac 225  Q
    |||| ||||||||| || |||||||||||||||| |||||||||||||||||||| | |||||||||||||||||| | |||||||||||||||| || |    
T  13435644 gttgcttcactcttccaatcttctgcaatgcttaaacgagattaaatccattgaaaatcctttgaagctttaagtcttgcatctcctgatgaacttcagc 13435743  T
Q  226 ttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctatt 325  Q
    || |||| |||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||  |||||| |||||||  ||| ||||| ||| || ||    
T  13435744 ttatggtgatcttctgcttctgatgagatgcttttgatgaacttgcttctgatgacgtcatcacttcaggagcactttt-actttaggagcacttctctt 13435842  T
Q  326 cagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  13435843 cagatgcttcaagcttcctttttgttgattccattgctctcttttgttctttcagaacct 13435902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 11 - 380
Target Start/End: Complemental strand, 12715573 - 12715219
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||| ||| | |||| |||||| ||||||    
T  12715573 agcagagacacaaactgagtagtggagatagtggttctacacttcgtacaattgtactttgtcaacgctcttcaaagaataggcatacaatgctttcaaa 12715474  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatc 208  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||    
T  12715473 tcatttcaaaatagtcgttgcttcactctttcaatcttctgcaatgcttagacgagattaaatccattgaacagccttttgaagctttaagtcttgcatc 12715374  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    ||||||||||||||||||||| || ||||                |||||||||||||||| ||||||||||||| |||| ||  ||| |||||||||||    
T  12715373 tcctgatgaactacaacttctagtgatct----------------tgcttctgatgaacttccttctgatgacgtcatca-cttcggaacacttttgtct 12715291  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccag 380  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||| | || |||||||||||||||||||    
T  12715290 tcaggagcacttctcttcagatgcttcaagcttcctttttgttgatttctttgctctcttttgttcttccag 12715219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 383
Target Start/End: Complemental strand, 15531777 - 15531404
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| | || ||||||||||| |||||||||||| ||||||||||||||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  15531777 agcagagacaaagacagagtagtggaggtagtggttgtacgcttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 15531678  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||  |||||||| ||||||  ||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| | |||||    
T  15531677 tcctttcaaaataaccgttgttttactcttctagtcttctgcaatgcttagacgagattaaattcattgaacaacctttcaagctttaagtcttgcatct 15531578  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
     |||||||||||||||||||||| |||||  | |||| ||||||||||||||||||||||||||||||| | || ||||  ||||||||||||||||||     
T  15531577 tctgatgaactacaacttctggtgatcttatgattctgatgagatgcttctgatgaacttgcttctgattatgtcatcacttcaggatcacttttgtcta 15531478  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaac 383  Q
    ||||||  || || ||||||||||| |||||| ||||||||||||||  || |||| ||||||| |||||||||    
T  15531477 caggagcgcttctcttcagatgctttaagctttctttttgttgattcatttgctcttttttgttattccagaac 15531404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 15 - 382
Target Start/End: Original strand, 23284564 - 23284930
Alignment:
Q  15 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaag-aacaagcatccaatgccttcaaatcat 113  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || ||| |||||| ||||||||| ||||||||||||||| |    
T  23284564 gagacacaaactgagtagtggagataatggttatacacttcgtacaattgtactttgtcaacgctcttcaaggaacaagcattcaatgccttcaaatcct 23284663  T
Q  114 ttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctg 213  Q
    |||||||||| ||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| | |||||||||    
T  23284664 ttcaaaataggcgttgcttcacttttctggtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcctg 23284763  T
Q  214 atgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcagg 313  Q
    ||||||| || ||||| |  |||||| |||||| ||||||||||||| |||||||||||||||||||| | ||||  |||| | |||  ||| |||||||    
T  23284764 atgaacttcagcttctagcgatcttctgcttctgatgagatgcttctaatgaacttgcttctgatgacatcatcacttcagaagcac--ttgacttcagg 23284861  T
Q  314 agaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaa 382  Q
    || ||| || |||||||| |||||||||||||||||||||||||||   ||||||||||||||||||||    
T  23284862 agcacttctcttcagatgtttcaagcttcctttttgttgattccatagttctcttttgttcttccagaa 23284930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 385
Target Start/End: Original strand, 9717841 - 9718213
Alignment:
Q  13 cagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatc 111  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  ||||||||||||| |||||||| |||||    
T  9717841 cagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatcaaatgcctttaaatc 9717940  T
Q  112 atttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcc 211  Q
     |||||||||||| |||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  9717941 ctttcaaaatagttgttgcttcactcttccagtcttctacaatgtttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcc 9718040  T
Q  212 tgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttca 311  Q
    |||||||||| | ||||| || ||||| | ||||| ||| ||||||| |||| ||||||||||||||||||| ||||  ||| || ||| ||||||||||    
T  9718041 tgatgaactagagcttctagtgatctttaacttctgatgggatgcttatgataaacttgcttctgatgacgtcatcacttcaagagcac-tttgtcttca 9718139  T
Q  312 ggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| | | || |||||| |||| |||||||||||||||||||||| || |||||||||||||||| |||||||    
T  9718140 ggagtagttctcttcagacgctttaagcttcctttttgttgattcctttgctctcttttgttcttctagaacct 9718213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 28 - 385
Target Start/End: Original strand, 21625114 - 21625468
Alignment:
Q  28 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcg 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||  |||||||||||| ||||||||||||||  ||||||| ||| ||    
T  21625114 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaacgctctttgaagaacaagcatgcaatgccttcaaatgctttcaaa-tagccg 21625212  T
Q  127 ttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaact 226  Q
    ||| || |||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||||||||   ||||||    
T  21625213 ttgctttactcttccaatcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctgtaagtcttgcatctcctgatga--gacaact 21625310  T
Q  227 tctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattc 326  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||| ||||||| ||| ||||  |||||| ||||||||||||||| ||  || || |||    
T  21625311 tctggtgatcttcagcttctgatgagatgcttatgatgaacttgcctctgatg-cgtcatcacttcaggagcacttttgtcttcagaagcgcttctcttc 21625409  T
Q  327 agatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||| |||||||||||  || |||||||||||||||| |||||||    
T  21625410 agatgcttcaagcttcctatttgttgattcattttctctcttttgttcttcgagaacct 21625468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 13602168 - 13602525
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| || | | ||||| ||| |||||||||||||||||||     
T  13602168 agcagagacacaaactgagtagtggagatagtggttatacacttcttacaattgtattttgtcaacgttcttcaaagaataagcatccaatgccttcaat 13602267  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | |||||    
T  13602268 tcatttcaaaatagtggttgcttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttgaagctttaagtcttgcatct 13602367  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    |||||||||||| | ||||| || |||||| |||| | |||||||||||||||||||||||||||||||||||| ||||                  |||    
T  13602368 cctgatgaactatagcttcttgtgatcttcggcttttgatgagatgcttctgatgaacttgcttctgatgacgtcatca------------------ctt 13602449  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || |||| | | || |||||||||||||||||||||| || ||||||||||||||||||||||||    
T  13602450 caggagcacttctcttcaaacggtttaagcttcctttttgttgattccttttctctcttttgttcttccagaacct 13602525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 24116824 - 24117198
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||||||| ||||||    
T  24116824 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaa 24116923  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagccttt-gaagctttaagtcctacatc 208  Q
    || ||||||||||  || |  ||||||| |   ||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||| | ||||    
T  24116924 tcctttcaaaataaccgctacttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaacagccttttgaagctttaagtcttgcatc 24117023  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtc 307  Q
    | |||||||||| || |||||||| |||||  |||||| |  ||||||||||||||||||||| |||||||||||| ||||  |||||| |||||| | |    
T  24117024 ttctgatgaacttcatcttctggtgatctt--gcttctaaccgagatgcttctgatgaacttgtttctgatgacgtcatcacttcaggagcacttt-gac 24117120  T
Q  308 ttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||| ||| || ||||||||||| |||||||||||||||||||||| |  |||||||||||||||||| |||||    
T  24117121 ttcaggagcacttctcttcagatgctttaagcttcctttttgttgattccttagctctcttttgttcttccataacct 24117198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 12 - 385
Target Start/End: Complemental strand, 20112852 - 20112493
Alignment:
Q  12 gcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaat 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||| ||||||||||||||||| |||||||    
T  20112852 gcagagacacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaat 20112753  T
Q  111 catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatct 209  Q
    | ||||||||||||||||| |||| |||| | ||||||||||||||||||| |||||||||||||||||||| || ||| |||||||||||| | |||||    
T  20112752 cctttcaaaatagtcgttgcttcattcttccggtcttctgcaatgcttagaagagattaaatccattgaacaacctttttaagctttaagtcttgcatct 20112653  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    | ||||||||| || |||| ||| ||||| |              |||||||| |||||||||||||||||||| ||||  ||| || |||  ||| |||    
T  20112652 cttgatgaacttcagcttcaggtgatcttta--------------gcttctgaagaacttgcttctgatgacgtcatcacttcatgaacac--ttgactt 20112569  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
     ||||| ||| || || |||||||||||||||||||||||||||||||||  | |||| |||||||||||||||||    
T  20112568 taggagcacttctctttagatgcttcaagcttcctttttgttgattccatagccctctcttgttcttccagaacct 20112493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 32544261 - 32544502
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  ||||| || ||||||||||||| |||    
T  32544261 agcagagacagaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaacatccaatgcctttaaa 32544360  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  32544361 tcctttcaaaatagacgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 32544460  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    |||||||||||| | ||| |||| || |||||||||| ||||    
T  32544461 cctgatgaactagagcttatggtgattttcagcttctgatga 32544502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 93 - 385
Target Start/End: Original strand, 25597558 - 25597832
Alignment:
Q  93 catccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaag 192  Q
    ||||||||||||||||||| |||| |||||| ||| | ||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  25597558 catccaatgccttcaaatcctttcgaaatagccgtcgcttcactcttccagtcttctacaatgcttagacgagattaaatccattgaacatcctttgaag 25597657  T
Q  193 ctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctc 292  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| |||||||| ||||        
T  25597658 ctttaagtcttgcatgtcctgatgaactacaacttctggtgatcttcagcttatgatgagatgcttctgatgaacttgcttcagatgacgtcatca---- 25597753  T
Q  293 aggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
                  ||||||||| ||| || |||||||||||  |||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  25597754 --------------cttcaggagcacttctcttcagatgcttttagcttcctttttgttgattccattgctctcttttattcttctagaacct 25597832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 19623975 - 19624332
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    ||| ||| | ||| |||||| |||||||||| ||||||    
T  19623975 agcaaagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactagtgtaacgctctccaaagaacaatcatccaatgctttcaaa 19624074  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||| ||||||||||| ||||||| |   ||||| |||||||||| ||||||||| ||||||||||||| |||||||||||||||| | | |||||    
T  19624075 tcctttcagaatagtcgttgcttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaacaacctttgaagctttaagacttgcatct 19624174  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||| || |||||||| |||||  | |||| ||||||               ||||||||||||||| ||||  | |||| ||| |||| |||    
T  19624175 cctgatgaacttcagcttctggtgatctt--gtttctgatgaga---------------tgcttctgatgacgtcatcactttaggagcac-tttgactt 19624256  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || |||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  19624257 caggagcacttctcttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 19624332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 45 - 385
Target Start/End: Complemental strand, 34451787 - 34451463
Alignment:
Q  45 ttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcag 143  Q
    |||||||||| ||||||||||||||||| || ||| ||||| ||| | |||| |||||| |||||||| | ||||| ||||||||| |||||||||||||    
T  34451787 ttgtacactttgtacaattgtactttgtcaacgcttttcaaagaataggcatacaatgctttcaaatcctctcaaattagtcgttgcttcactctttcag 34451688  T
Q  144 tcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagct 243  Q
    ||||||||||||||||||||| | | |||||||||||||||||||||| ||||||||| | ||||||||||||||||| | |||||||| |||           
T  34451687 tcttctgcaatgcttagacgatactgaatccattgaacagcctttgaatctttaagtcttgcatctcctgatgaactagagcttctggtgatc------- 34451595  T
Q  244 tcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcc 343  Q
                ||||| |||||||||||||||||||||| ||||  |||| | ||||||||||||||||||  || || ||||||||||||||||||||    
T  34451594 ----------aacttctaatgaacttgcttctgatgacgtcatcacttcagaagcacttttgtcttcaggagcgcttctcttcagatgcttcaagcttcc 34451505  T
Q  344 tttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||||||| || ||||||||||||||||||||||||    
T  34451504 tttttgctgattcctttgctctcttttgttcttccagaacct 34451463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 379
Target Start/End: Original strand, 22802137 - 22802489
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||  |||||||||||||||||||||| |||    
T  22802137 agcagagacaaaaatagagtagtggaggtagtggttgtacacttcgtacaattgtactttgttaacgctctttgaagaacaagcatccaatgcctttaaa 22802236  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    |  ||||||| | |||||||||||||| || ||||| |||||||||||||||| | ||||||||||||||||| |||||||||||||| ||  | |||||    
T  22802237 ttctttcaaacttgtcgttgtttcacttttccagtcgtctgcaatgcttagacaatattaaatccattgaacaacctttgaagctttatgt--tgcatct 22802334  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||||||||||||||| || ||||              ||||||||||||||||||||| ||||||| |  |  |||||| ||| ||||||||    
T  22802335 cctgatgaactacaacttctggtgattttca--------------gcttctgatgaacttgcttctaatgacgtcactacttcaggagcac-tttgtctt 22802419  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||||| | |    |||||| | || |||||||||||||||||||||| || |||||| |||||||||||    
T  22802420 caggagcagtttatttcagacgttttaagcttcctttttgttgattcctttcctctctattgttcttcca 22802489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 26972379 - 26972107
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||  |||||||||||||| || ||| ||  |||||||| ||||||||||||| |||    
T  26972379 agcagagacaaatactgagtagtggaggtagtggttgtacacttcg--caattgtactttgtcaacgctctttgaagaacaaacatccaatgcctttaaa 26972282  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| | |||||    
T  26972281 tcctttcaaaatagttgttgcttcactcttcaagtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatct 26972182  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgt 283  Q
    ||||||||| || | |||||||| || ||| |||||| ||| |  ||||||| || |||||||||||||||||||    
T  26972181 cctgatgaaatagagcttctggtgattttctgcttctgatgaacttgcttctaataaacttgcttctgatgacgt 26972107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 19086154 - 19086520
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||| |||||||||||||||||           
T  19086154 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc------- 19086246  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaa-cagcctttgaagctttaagtcctacatc 208  Q
       ||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||| ||||| ||| ||||||||||| | ||||    
T  19086247 ---tttcaaaatagtcgttgcttcactctcccagtcttctgcaatacttagacgagattaaatccattgaatcagcccttg-agctttaagtcttgcatc 19086342  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcact------- 301  Q
    |||||||||||| || |||||||| |||||||||               |||||||||||||||||||||||||| ||||  |||||| ||||           
T  19086343 tcctgatgaacttcagcttctggtgatcttcagc---------------tctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgactt 19086427  T
Q  302 ---------tttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
             |||| ||||||||| ||| || |||||| ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  19086428 caggagcactttgacttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 19086520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 11 - 230
Target Start/End: Original strand, 29918013 - 29918232
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  |||||||||||||  |||||||||||    
T  29918013 agcatagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatctgatgccttcaaa 29918112  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||||||||| |||||| || || |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| | |||||    
T  29918113 tcttttcaaactagtcgttgcttcacttttccaatcttctgcaatgcttagacgagattaaatcca-tgaacaacctttgaagctttaagtcttgcatct 29918211  T
Q  210 cctgatgaactacaacttctg 230  Q
    |||||||||||||| ||||||    
T  29918212 cctgatgaactacagcttctg 29918232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 15302196 - 15302403
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||| || ||| ||||| |||||||||||||||||||| |||    
T  15302196 agcagagacactaactgagtagtggagatagtggttgtacactttgtacaattgtacaatgtcaacgctcttcaaagaacaagcatccaatgcctttaaa 15302295  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||| ||||| |||||| || ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||| | |||||    
T  15302296 tcctttcaaaatagccgttgcttcacttttccagtcttctgcaatgtttagacgagattaaatccattgaacaacctttgacgctttaagtcttgcatct 15302395  T
Q  210 cctgatga 217  Q
    ||| ||||    
T  15302396 cctaatga 15302403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 14 - 201
Target Start/End: Original strand, 15987232 - 15987421
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatca 112  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||||     
T  15987232 agagacacaaactgagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 15987331  T
Q  113 -tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc 201  Q
     ||| ||||||||| ||| |||||||||   |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  15987332 cttttaaaatagtcattgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacatcctttgaagctctaagtc 15987421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 379
Target Start/End: Original strand, 18435552 - 18435938
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| | ||| ||||| |||||||||||||||| ||||| ||||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  18435552 agcagagacaaaaacagtgtactggaggtagtggttgtacactttgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 18435651  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| ||  |||||| || ||| ||||||||||||||||||||||||| | ||||  |||||||||||| | |||||    
T  18435652 tcctttcaaaatagtcgttgcttcacttttctagtcttttgaaattcttagacgagattaaatccattgaataaccttcaaagctttaagtcttgcatct 18435751  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcact------- 301  Q
    |||||||||||| | ||||| || ||||||||||||| ||| |  |||||||  || ||| |||||||||||||| | ||  |||||| ||||           
T  18435752 cctgatgaactagagcttctagtgatcttcagcttctgatgaacttgcttctagtggactagcttctgatgacgtcaccacttcaggagcactttgtgtt 18435851  T
Q  302 ---------tttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
             |||||||||||||| | | || ||||||||||| |||||||||||||||||||||| || |||||| |||||||||||    
T  18435852 caggagcactttgtcttcaggagcagttctcttcagatgctttaagcttcctttttgttgattccttttctctctattgttcttcca 18435938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 14100592 - 14100373
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||| ||||||||||||| || ||| || || ||| ||||||||||||||||||||    
T  14100592 agcagagaca-aaacagagtagtggaggtagtggttgtacacttcgtataattgtactttgtcaacgctctttaaagaagaagcatccaatgccttcaaa 14100494  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||  ||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||||| | |||||    
T  14100493 tcctttcaaaatagttgtttcttcactcttccagtcttctacaatgcttagatgagattaaatccattgaacatcctttgaaactttaagtcttgcatct 14100394  T
Q  210 cctgatgaactacaacttctg 230  Q
    ||||||||||| || ||||||    
T  14100393 cctgatgaacttcagcttctg 14100373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 11 - 196
Target Start/End: Original strand, 18378310 - 18378496
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| ||||| ||||| ||||||||||||||||||    
T  18378310 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttatcaacgctcttcaaagaacatgcatccaatgccttcaaa 18378409  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagcttt 196  Q
    || |||||||||||| |||| || |||||| ||||||| |||||| ||||||||||||| ||||||||||||| || ||||||||||    
T  18378410 tcctttcaaaatagttgttgcttgactcttccagtcttttgcaatacttagacgagatttaatccattgaacaaccgttgaagcttt 18378496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 15 - 379
Target Start/End: Complemental strand, 20730853 - 20730505
Alignment:
Q  15 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcat 113  Q
    |||||| |||| ||| ||||||| |||||||||||||||| ||||||||||||||||| || ||| ||  |||||||| ||||||||||||||||||| |    
T  20730853 gagacaaaaacagagcagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcct 20730754  T
Q  114 ttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctg 213  Q
    |||||| ||||||||| |||||| || |||||||||||||| |||||| |||||||||||| |||||||||||||||||||||  ||  |||||||||||    
T  20730753 ttcaaactagtcgttgcttcacttttccagtcttctgcaatacttagatgagattaaatcccttgaacagcctttgaagctttttgt--tacatctcctg 20730656  T
Q  214 atgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcagg 313  Q
    ||||||| || ||||| || || ||||              |||| |||||||||||||||||||||||| |  |  |||||| ||| |||||||||| |    
T  20730655 atgaactgcagcttctagtgattttca--------------gcttatgatgaacttgcttctgatgacgtcactacttcaggagcac-tttgtcttcatg 20730571  T
Q  314 agaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    || | |  | |||||| |||| |||||||||||||||||||| | || |||||| |||||||||||    
T  20730570 agcagttttcttcagacgcttaaagcttcctttttgttgatttctttgctctctattgttcttcca 20730505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 16265303 - 16264954
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| | || ||| ||  ||||||||||||||||||| ||||||    
T  16265303 agcagagacacaaacagagtagtggaggtagtggttgcacacttcgtacaattgtactttctcaacgctctttgaagaacaagcatccaatgcattcaaa 16265204  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
     | ||||||  || |||||| |||||| || ||||| | ||||||||||||| |||||||||||||||||||| ||||| |||||||| ||  | |||||    
T  16265203 acctttcaatctactcgttgcttcacttttccagtcctgtgcaatgcttagatgagattaaatccattgaacaacctttcaagctttatgt--tgcatct 16265106  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    | ||| ||||| || |||||||| || ||||              |||||||||||||||||||||||||||||   ||  |||||| ||| ||||||||    
T  16265105 cttgacgaactgcagcttctggtgattttca--------------gcttctgatgaacttgcttctgatgacgtcgccacttcaggagcac-tttgtctt 16265021  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttctt 376  Q
    |||||| | |  | ||||||||||| | | |||||||||||||||||| || |||||| ||||||||    
T  16265020 caggagcagttttcttcagatgctttaggattcctttttgttgattcctttgctctctattgttctt 16264954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 39 - 230
Target Start/End: Original strand, 19688790 - 19688980
Alignment:
Q  39 tagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactc 137  Q
    |||||||| ||||||||||||||||||||||||| || ||| ||  |||||||| ||||||||||||||||||| ||||||||||||| ||| |||||||    
T  19688790 tagtggttatacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaatagtccttgcttcactc 19688889  T
Q  138 tttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctg 230  Q
    || |||| |||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||||   |||||||||||||||| || ||||||    
T  19688890 ttccagttttctacaatgcttggacgagaataaatccattgaacaacctttgaagctttaagtc--gcatctcctgatgaacttcagcttctg 19688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 22076560 - 22076288
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| ||| || |||  || ||||| ||||||| ||||| ||| ||    
T  22076560 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaatgtactatgtcaacgctctttgaagaataagcatcaaatgctttccaa 22076461  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || |||||||||||||| |  ||| ||  |||||||||||||  ||||||||| |||||||| || |||||| ||| |||||||||||  | |||||    
T  22076460 tccttccaaaatagtcgttgctatacttttcgagtcttctgcaatctttagacgagtttaaatcctttaaacagcttttaaagctttaagt--tgcatct 22076363  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgt 283  Q
    |||||||||||||| |||||||| ||   |||||||| ||| |  |||||||||||| |||||||||||||||||    
T  22076362 cctgatgaactacatcttctggtgattcacagcttctgatgaacttgcttctgatgaccttgcttctgatgacgt 22076288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 283
Target Start/End: Original strand, 21618251 - 21618512
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| ||||||||||| |||||||||||||||||||||||  ||||| ||| || ||| ||  ||||| |||||||||||||||||||||| || |||||    
T  21618251 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaaa 21618350  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaact 220  Q
    ||||||||| || ||| || ||||||||| ||||  ||||| ||| || ||||| || |||| | |||||||||||||||  | ||||| ||||||||||    
T  21618351 tagtcgttgctttacttttccagtcttctacaatctttagaagagtttgaatccgttaaacaacttttgaagctttaagt--tgcatcttctgatgaact 21618448  T
Q  221 acaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgt 283  Q
    ||| |||||||| ||  ||||||||| ||  |  ||||||||||||||||||||||||||||||    
T  21618449 acagcttctggtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatgacgt 21618512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 15954702 - 15954933
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||  || ||||||||| |||||||||||||||     
T  15954702 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaataacaagcattcaatgccttcaaatcc 15954801  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||| ||||||||| |||| | || ||||||||||||||  ||||| ||| || ||||| || |||||| |||||||||||||||  | |||||| |    
T  15954802 tttcaaattagtcgttgcttcatttttccagtcttctgcaatctttagaagagtttgaatccgttaaacagcttttgaagctttaagt--tgcatctctt 15954899  T
Q  213 gatgaactacaacttctggttatcttcagcttct 246  Q
    ||||||||||| |||||||| ||  |||||||||    
T  15954900 gatgaactacagcttctggtaattctcagcttct 15954933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 11 - 273
Target Start/End: Original strand, 16336123 - 16336381
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||| ||| || ||| ||  ||||| |||||| |||||||||| ||    
T  16336123 agcagagacaaaaacagagtagtgtagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaataagcattcaatgccttctaa 16336222  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || |||||||||||||| |  ||| || ||||||||||||||| ||||||||| || ||||| || |||| | |||||||||| ||||  | |||||    
T  16336223 tccttccaaaatagtcgttgctatacttttccagtcttctgcaatgtttagacgagtttgaatcctttaaacaacttttgaagcttcaagt--tgcatct 16336320  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgctt 273  Q
    |||||||| |||||||||||||| ||  ||||||||   ||| |  ||||||||||||||||||    
T  16336321 cctgatgatctacaacttctggtgattctcagcttc---tgataaacttctgatgaacttgctt 16336381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 16877209 - 16877429
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaag-aacaagcatccaatgccttcaaa 109  Q
    ||||||| || |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||  || ||  |||||||||| ||||||||    
T  16877209 agcagaggcaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaggaattagcatccaattccttcaaa 16877308  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||| || |||||||||| |||||| | |||||||||||||||  ||||||||| || |||||||| |||| | |||||||||||||||  | |||||    
T  16877309 tccttttaagatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgaatccattaaacaacttttgaagctttaagt--tgcatct 16877406  T
Q  210 cctgatgaactacaacttctggt 232  Q
    |||||||||||||||||| ||||    
T  16877407 cctgatgaactacaacttttggt 16877429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 9 - 246
Target Start/End: Complemental strand, 19833187 - 19832951
Alignment:
Q  9 gaagcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc--aagaacaagcatccaatgccttc 106  Q
    |||||||| ||| |||| ||||||||||| ||||| |||||||||||||||||  ||||| ||| || ||| ||   | ||||||||||||||||| |||    
T  19833187 gaagcagacaca-aaacagagtagtggaggtagtgcttgtacacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttc 19833089  T
Q  107 aaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctaca 206  Q
    ||||| ||||||||||||||||| |||||| || ||||||||||||||  ||||| ||| || ||||| || |||||| ||| |||||||||||  | ||    
T  19833088 aaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatccgttaaacagcttttaaagctttaagt--tgca 19832991  T
Q  207 tctcctgatgaactacaacttctggttatcttcagcttct 246  Q
    ||||||||||||||||| |||||||| ||  |||||||||    
T  19832990 tctcctgatgaactacatcttctggtgattctcagcttct 19832951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 303
Target Start/End: Complemental strand, 20488071 - 20487778
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||| ||| |||| ||||||||||| ||||||||||| |||||||||||  ||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  20488071 agcagatacaaaaacagagtagtggaggtagtggttgtaaacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 20487972  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagatt-aaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    || ||||||||||| ||||| |||||| || ||||||||||||||  ||||||||| || ||  ||||| |||| | |||||||| ||||||  | ||||    
T  20487971 tcctttcaaaatagccgttgcttcacttttacagtcttctgcaatctttagacgaggttgaaccccattaaacaacttttgaagccttaagt--tgcatc 20487874  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 303  Q
      |||||||||| |||||||| || || || ||||||| ||  |  |||||||||| |||| | |||||||||||| ||||  |||||| ||||||    
T  20487873 ctctgatgaactgcaacttctagtgatttttagcttctgataaacttgcttctgattaactcgtttctgatgacgtcatcacttcaggagcacttt 20487778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 198
Target Start/End: Complemental strand, 10640555 - 10640384
Alignment:
Q  28 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaaa-gctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtc 125  Q
    |||||||||| ||||||||||||||||||||||||||| |||| || || ||| ||||| ||||||||||| |||||||||||||| |||  || |||||    
T  10640555 agtagtggaggtagtggttgtacacttcgtacaattgtccttttttcaacgctcttcaaagaacaagcatctaatgccttcaaatccttttgaattagtc 10640456  T
Q  126 gttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaa 198  Q
    |||| |||||||||   |||||||||||||| ||| || |||||||||| ||||||| |||||||||||||||    
T  10640455 gttgcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcctttgaacaacctttgaagctttaa 10640384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 288
Target Start/End: Original strand, 19470683 - 19470941
Alignment:
Q  28 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtcg 126  Q
    |||||||||| ||||||||||| ||||||||||||||| |||| |  | ||| | ||| |||||||||||||||||||||||||| |||  || ||||||    
T  19470683 agtagtggaggtagtggttgtaaacttcgtacaattgtcctttttccacgctctgcaaagaacaagcatccaatgccttcaaatccttttgaattagtcg 19470782  T
Q  127 ttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaact 226  Q
    ||| |||| ||||   ||||| |||||||| ||| || |||||||||  ||||||| |||||||||||| |  ||   |||||  |||||| || |||||    
T  19470783 ttgcttcattcttctggtcttgtgcaatgc-taggcgtgattaaatctgttgaacaacctttgaagcttcagttctctcatcttttgatgatcttcaact 19470881  T
Q  227 tctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatca 288  Q
    ||| || || ||  |||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  19470882 tcttgtgatgtt--gcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatca 19470941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 230
Target Start/End: Original strand, 12348995 - 12349206
Alignment:
Q  17 gacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcattt 115  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||  ||||| ||| || ||| ||  ||||| ||||||||||||||||  |||| |||    
T  12348995 gacaaaaacagagtagtggagatagtggttgtacactttgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaatccttt 12349094  T
Q  116 caaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgat 215  Q
    |||||||||||||| |  ||| || |||||||||||||| |||||||||| || ||||| |  |||||| ||||||||| |||||  | |||||||||||    
T  12349095 caaaatagtcgttgctatacttttccagtcttctgcaat-cttagacgagtttgaatccttgaaacagcttttgaagctctaagt--tgcatctcctgat 12349191  T
Q  216 gaactacaacttctg 230  Q
    ||||| || ||||||    
T  12349192 gaactgcagcttctg 12349206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 12423261 - 12423435
Alignment:
Q  15 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatcat 113  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| |||||| |||||||||| |||| |    
T  12423261 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaaggtactatgtcaacgctctttgaagaataagcatacaatgccttccaatcct 12423360  T
Q  114 ttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttg 189  Q
    |||||||||||||||| |  ||| || ||||||||||| || |||||||||| || |||||||| |||||| ||||    
T  12423361 ttcaaaatagtcgttgctatacttttccagtcttctgc-attcttagacgagtttgaatccattaaacagcttttg 12423435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 180
Target Start/End: Original strand, 26943572 - 26943741
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||| ||||| |||| ||||||||||  ||||||||||||||||||||||||||||||| |  || ||| ||| ||||||||||||||||||||||| ||    
T  26943572 agcaaagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaattgtacttcgccaacgctcttcaaagaacaagcatccaatgccttctaa 26943671  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaa 180  Q
    || | |  ||||||  |||| |||||||||  ||||||||||||||| |||||  |||||||||| |||||    
T  26943672 tcctattgaaatagcggttgcttcactcttctagtcttctgcaatgc-tagacatgattaaatcctttgaa 26943741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 379
Target Start/End: Original strand, 21235137 - 21235461
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtc 125  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| || ||| ||  ||||||||||||| |||||||||||||  ||||||           
T  21235137 gagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctttgaagaacaagcatcgaatgccttcaaatgctttcaa------- 21235229  T
Q  126 gttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaac 225  Q
    ||   || |      ||| ||| |||||||||||||||||||||||||||||||||| ||||| |||||||| ||  | |||||||||||||||| || |    
T  21235230 gtccattgaa-----cagccttttgcaatgcttagacgagattaaatccattgaacaacctttaaagctttatgt--tgcatctcctgatgaactgcagc 21235322  T
Q  226 ttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctatt 325  Q
    |||| || || ||||              |||||||||||||||||||||||||||||    |  |||||| ||| |||||||||||||| | |  | ||    
T  21235323 ttctagtgattttca--------------gcttctgatgaacttgcttctgatgacgtcgctacttcaggagcac-tttgtcttcaggagcagttttctt 21235407  T
Q  326 cagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||| |||| ||||||||||||||| |||||| || |||||| |||||||||||    
T  21235408 cagacgctttaagcttcctttttgtagattcctttgctctctattgttcttcca 21235461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 25594064 - 25594155
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatg 101  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| || ||  ||| ||||||||||||||||||    
T  25594064 agcagagacacaaactgagtagtggaggtagtggttgtacatttcgtacaattgtactttgtcaacgcgcttcaaagaacaagcatccaatg 25594155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 14100330 - 14100252
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||| ||| || | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14100330 cttcaggagtacttctctccagatgcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaacct 14100252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 248 - 379
Target Start/End: Complemental strand, 10640351 - 10640222
Alignment:
Q  248 atgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttt 347  Q
    ||||| |||||||||||||||||||||||||||||| ||||  |||||| |||||  | |||||| |   ||  | |||| ||||||||||||||||| |    
T  10640351 atgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt--gacttcagaacctcttttcttcatatgcttcaagcttccttct 10640254  T
Q  348 tgttgattccattactctcttttgttcttcca 379  Q
    |||||||| |||| ||||| ||||||||||||    
T  10640253 tgttgatttcattgctctcatttgttcttcca 10640222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 15302422 - 15302541
Alignment:
Q  267 cttgcttctgatgacgttatcagctcaggatcactttt-gtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactct 365  Q
    ||||||||||||||||| ||||  |||||| ||||||| ||||||||||| ||| || |||||| || | ||| |||| ||||||||||||| || ||||    
T  15302422 cttgcttctgatgacgtcatcacttcaggagcactttttgtcttcaggagcacttctcttcagacgccttaagtttccattttgttgattcctttgctct 15302521  T
Q  366 cttttgttcttccagaacct 385  Q
    ||||| |||||| |||||||    
T  15302522 ctttttttcttctagaacct 15302541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 33352079 - 33351892
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaacaagcatccaatgccttcaaat 110  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||||||||  ||||| ||| || ||| || ||||| || |||||||||  ||  |||    
T  33352079 agcagagacaaaaacagagtagtggagatagtgattgtacacttcgtacaaacgtactatgtcaacgctcttgaagaataaacatccaatgtttttcaat 33351980  T
Q  111 catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagt 200  Q
    | ||||||||||| | ||| |  ||| || |||||||||||| | ||||||||||  | ||||| |  |||||| ||||| |||||||||    
T  33351979 cctttcaaaatag-ccttgctatacttttccagtcttctgcact-cttagacgagtgtgaatccttgaaacagcttttgaggctttaagt 33351892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 32544555 - 32544638
Alignment:
Q  302 tttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||| | | || |||||| |||| |||||||||||||||||||||| || |||||| ||||||||||| |||||    
T  32544555 tttgtcttcaggagcagttctcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttccataacct 32544638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 19689008 - 19689086
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||| ||  || |||||| ||||||| ||||||||||||||||||  || ||||||||||||||||||||||||    
T  19689008 cttcaggagcacatctcttcagacgcttcaaacttcctttttgttgattcatttgctctcttttgttcttccagaacct 19689086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 15987503 - 15987564
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||||||||||||||||||| |  |||||||||||| || ||||||||    
T  15987503 ttcagatgcttcaagcttcctttttgttgattccttagctctcttttgttttttcagaacct 15987564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 18378545 - 18378617
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||| ||| || || ||| | || |||||||||||||||||||||| |||||||||||||||||||||    
T  18378545 cttcaggagcacttctcttaagacgttttaagcttcctttttgttgattcctttactctcttttgttcttcca 18378617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 379
Target Start/End: Original strand, 15954928 - 15955052
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagctt-cctttttgttga 353  Q
    ||||||||| ||||||||||||||||||| | ||  |||||| ||| |||||||| ||||| | |  | |||||| |||| |||||| ||||||||||||    
T  15954928 gcttctgataaacttgcttctgatgacgtcaccacttcaggagcac-tttgtcttaaggagcagtttttttcagacgctttaagcttccctttttgttga 15955026  T
Q  354 ttccattactctcttttgttcttcca 379  Q
    |||| || |||| | |||||||||||    
T  15955027 ttcctttgctctttattgttcttcca 15955052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 383
Target Start/End: Original strand, 25592838 - 25592886
Alignment:
Q  335 caagcttcctttttgttgattccattactctcttttgttcttccagaac 383  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||||||    
T  25592838 caagcttcctttttgtagattccattgctctcatttgttcttccagaac 25592886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 19482751 - 19482798
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  19482751 agagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaa 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 17316678 - 17316628
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| ||||  ||||||| ||||||||||||||||||||||||||    
T  17316678 agcagagacaaaaacatagtagtgcagatagtggttgtacacttcgtacaa 17316628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 18383962 - 18384008
Alignment:
Q  339 cttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||    
T  18383962 cttcttttttgttgattcctttgctctcttttgttcttccagaacct 18384008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 19066171 - 19066121
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  19066171 agcagagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaa 19066121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 303
Target Start/End: Original strand, 26943789 - 26943851
Alignment:
Q  241 gcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 303  Q
    |||||| ||||| ||||||||| |||||||||||||||||||| ||||  |||||| ||||||    
T  26943789 gcttctaatgaggtgcttctgacgaacttgcttctgatgacgtcatcacttcaggagcacttt 26943851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 17381517 - 17381578
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgt 72  Q
    |||||||||| |||| || |||||||| ||||| |||||||||||||||||  |||||||||    
T  17381517 agcagagacaaaaacagaatagtggaggtagtgattgtacacttcgtacaaacgtactttgt 17381578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 26972050 - 26971989
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| |||| ||| |||||||||||||||||| || |||||  |||||||||||||||||    
T  26972050 ttcagacgctttaagattcctttttgttgattcctttgctctccattgttcttccagaacct 26971989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 16462480 - 16462432
Alignment:
Q  337 agcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||  |||||||| ||||| ||||||||||||||||||    
T  16462480 agcttcctttttgtaaattccattcctctcatttgttcttccagaacct 16462432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 19065951 - 19065892
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||||||||||| ||||  |||| | ||| ||||||||||||||    
T  19065951 gcttctgatgaacttgcttctgatgacgtcatcacttcagaagcac-tttgtcttcaggag 19065892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 377
Target Start/End: Original strand, 23298259 - 23298302
Alignment:
Q  334 tcaagcttcctttttgttgattccattactctcttttgttcttc 377  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||    
T  23298259 tcaagcttcctttttgtagattccattgctctcatttgttcttc 23298302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 385
Target Start/End: Original strand, 7812314 - 7812364
Alignment:
Q  335 caagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||| ||||| ||| || || ||||||||||||||||||    
T  7812314 caagcttcctttttgtagattcaattgctttcatttgttcttccagaacct 7812364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 19832924 - 19832867
Alignment:
Q  257 ttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||| ||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  19832924 ttctgatgaccttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 19832867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 17381653 - 17381713
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||| |||||||||||||||||||||||| | ||  |||||| ||| ||||||||||||||    
T  17381653 tgcttttgatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtcttcaggag 17381713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 288
Target Start/End: Complemental strand, 17608247 - 17608214
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatca 288  Q
    ||||||||||||||||||||||||||||| ||||    
T  17608247 gcttctgatgaacttgcttctgatgacgtcatca 17608214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 283
Target Start/End: Original strand, 26589847 - 26589876
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgt 283  Q
    ||||||||||||||||||||||||||||||    
T  26589847 tgcttctgatgaacttgcttctgatgacgt 26589876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 139292 - 139233
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||| |||||||||||||||| || ||||  |||||| ||| ||||||||||||||    
T  139292 gcttctgataaacttgcttctgatgatgtcatcatttcaggagcac-tttgtcttcaggag 139233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 147313 - 147254
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||| |||||||||||||||| || ||||  |||||| ||| ||||||||||||||    
T  147313 gcttctgataaacttgcttctgatgatgtcatcatttcaggagcac-tttgtcttcaggag 147254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 12423446 - 12423505
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||| ||||||||||||||||||| ||||  ||| || ||| ||||||||||||||    
T  12423446 gcttctgataaacttgcttctgatgacgtcatcacttcaagagcac-tttgtcttcaggag 12423505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 16877438 - 16877466
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgt 283  Q
    |||||||||||||||||||||||||||||    
T  16877438 gcttctgatgaacttgcttctgatgacgt 16877466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 379
Target Start/End: Complemental strand, 17608160 - 17608104
Alignment:
Q  324 ttcagatgcttcaagcttc-ctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||||| | ||||| ||||||||||||||  || ||||||||||||||||||    
T  17608160 ttcagatgctttaggcttctctttttgttgattcatttgctctcttttgttcttcca 17608104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 26943854 - 26943906
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttctt 376  Q
    ||||||||||||||||  |||| |||||||| ||||| ||||| |||||||||    
T  26943854 ttcagatgcttcaagcaaccttcttgttgatcccattgctctcatttgttctt 26943906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 205; Significance: 1e-112; HSPs: 6)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 60012 - 60385
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||| || ||| ||||| |||||||||||||||| |||||||    
T  60012 agcagagacacaaactgagtagaagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatggcttcaaa 60111  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| || |||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  60112 tcctttcaaaatagtcgttgcttcacttttccagtcttctgcaattcttggacgagattaaatccattgaacatcctttgaagctttaagtcttgcatct 60211  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
     ||||||||||  | |||||||| |||||  |||||||||||||||||||| |||||||||| ||||||||||| ||||  |||||| ||||||||||||    
T  60212 tctgatgaactttagcttctggtgatctt--gcttcttatgagatgcttctaatgaacttgcatctgatgacgtcatcacatcaggagcacttttgtctt 60309  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    || ||| | | || |||||| || | ||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  60310 caagagcatttctcttcagacgccttaagcttcatttttgttgattcctttgctctcttttgttcttccagaacct 60385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 7922 - 8150
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||||||  ||||||    
T  7922 agcagagacacaaacttcgtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgaattcaaa 8021  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| || ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||  | |||||    
T  8022 tcctttcaaaatagtcgttgcttcacttttacagtcttctacaatgcttggacgagattaaatccattgaacaacctttgaagctttaagttttgcatct 8121  T
Q  210 cctgatgaactacaacttctggttatctt 238  Q
    |||||||||||  | ||||||||||||||    
T  8122 cctgatgaactttagcttctggttatctt 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 8148 - 8266
Alignment:
Q  267 cttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctc 366  Q
    ||||||||||||||||| ||||  |||||| |||||||||||||||||| ||| || |||||| || | |||||| ||||||||||||||| || |||||    
T  8148 cttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaagcttactttttgttgattcctttgctctc 8247  T
Q  367 ttttgttcttccagaacct 385  Q
    |||||||||||||||||||    
T  8248 ttttgttcttccagaacct 8266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 385
Target Start/End: Original strand, 115712 - 115889
Alignment:
Q  205 catctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactttt 304  Q
    |||||||||||||||  || |||||||| |||||  |||||| |||||||||||||||| ||||||||| ||||||||| ||||  |||||| ||| |||    
T  115712 catctcctgatgaacatcagcttctggtgatctt--gcttctgatgagatgcttctgataaacttgcttttgatgacgtcatcacttcaggagcac-ttt 115808  T
Q  305 gtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    | ||||||||||||  || || |||| |||| ||||||||||||||||||||     ||||||||| |||||| |||||||    
T  115809 gacttcaggagaacatctctttagattcttctagcttcctttttgttgattcgtcagctctcttttattcttcgagaacct 115889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 151788 - 151714
Alignment:
Q  225 cttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcact 301  Q
    |||||||| |||||  |||||| ||||| |||||||||||||||||||||||||||||| ||||  |||||| ||||    
T  151788 cttctggtgatctt--gcttctcatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcact 151714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 151831 - 151795
Alignment:
Q  165 gattaaatccattgaacagcctttgaagctttaagtc 201  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  151831 gattaaatcctttgaacaacctttgaagctttaagtc 151795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 21086 - 20712
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||  | ||| ||  ||||| ||||||||||||||||||||    
T  21086 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtacttggtcgacgctctttgaagaataagcatccaatgccttcaaa 20987  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||   ||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | |||||    
T  20986 tcctttcaaaatgaccgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatcaattgaacaacctttgaagctttaagtcttgcatct 20887  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    | ||||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||  |||||| |||| ||  |||    
T  20886 cttgatgaacttcaacttttggtgatcttcagcttctaatgagatgcttctgatgaacttgtttctgatgacgtcatcacttcaggagcactatt-actt 20788  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||| || |||||| ||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||    
T  20787 caggagcacttctcttcagacgcttcaaacttcctttttgttgattccttagctctcttttgttcttccagaacct 20712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 197; Significance: 1e-107; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 32481 - 32842
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||| ||||| ||||||    
T  32481 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatcaaatgcattcaaa 32580  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||    
T  32581 tcctttcaaaatagtcgttacttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagtctttgaagctttaagtcttgcatct 32680  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||||||| || |||| ||||| |              ||||||||||||||| ||||||||||||| ||||  |||||| ||||||||||||    
T  32681 cctgatgaactacaagttgtggtgatcttta--------------gcttctgatgaacttacttctgatgacgtcatcacttcaggagcacttttgtctt 32766  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| || |||  | |||||| || | |||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  32767 cagaagcacttttcttcagacgccttaagcttcctttttgttgattcctttactctcttttgttcttctagaacct 32842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 49328 - 49687
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  49328 agcagagacacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 49427  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| |||||||||  | |||||||||||||||||||||||||||||||||||||||  ||||||||||||||| | | |||||    
T  49428 tcctttcaaaatagtagttgcttcactcttcaaatcttctgcaatgcttagacgagattaaatccattgaacaaactttgaagctttaagacttgcatct 49527  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||               || ||||  |||||| ||||||||||||    
T  49528 cctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaa---------------gtcatcacttcaggagcacttttgtctt 49612  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    || ||| ||| || ||| || || | |||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  49613 caagagcacttctcttc-gacgccttaagcttcctttttgttgattcctttgctctcttttgttcttccagcacct 49687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 289
Target Start/End: Complemental strand, 455 - 181
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatcatt 114  Q
    ||||| |||| ||||||||||| ||||||| ||||||||||||||   ||||||||| || |||  || ||| | |||||||||||||||||||||| ||    
T  455 agacataaacagagtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctt 356  T
Q  115 tcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagc-ctttgaagctttaagtcctacatctcctg 213  Q
    ||||| ||| ||||| | |  |  || ||||||  ||  |  ||||||||| || |||||||| ||||||  |||||| ||||| ||  | ||||| |||    
T  355 tcaaattagccgttgctactttactttagtctttcgctctctttagacgagtttgaatccattaaacagctatttgaaactttaggt--tgcatcttctg 258  T
Q  214 atgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgttatcag 289  Q
    ||||| ||||  ||||||| || | |||||||| || ||  |||||||||| ||||||||||||||||||| |||||    
T  257 atgaagtacagtttctggtgatatacagcttctgatagacttgcttctgataaacttgcttctgatgacgtcatcag 181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 196; Significance: 1e-106; HSPs: 7)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 301
Target Start/End: Complemental strand, 377674 - 377383
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  377674 agcagagacacaaactgagtagtggagatagtggttgtacacttggtacaattgtactttgtcaatgctcttcaaagaacaagcatccaatgccttcaaa 377575  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||| |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||| | |||||    
T  377574 tcctttcaatatagtcgttgcttcactcttccggtcttctgcaatgcttagacgagattaaatccattcaacaacatttgaagttttaagtcttgcatct 377475  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcact 301  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||  |||||| ||||    
T  377474 cctgatgaactataacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcact 377383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 220234 - 220607
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaag-aacaagcatccaatgccttcaaa 109  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || ||| |||||  |||||||||||||||| ||||||    
T  220234 agcagaggcacaaactgagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaataacaagcatccaatgc-ttcaaa 220332  T
Q  110 t-catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    | ||||| ||  ||| ||||| ||||||||    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||   ||||    
T  220333 ttcatttgaat-tagccgttgcttcactctcctggtcttctgcaatgcttagacgagattaaaaccaatgaacagcctttgaagctttaagtctctcatc 220431  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    |||||||||||| || |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| || |  |||||| |||  ||| ||    
T  220432 tcctgatgaacttcagcttctggtgatcttcagcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcattacttcaggagcac--ttgact 220529  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctc-ttttgttcttccagaacct 385  Q
    ||||||| |||  | |||||| |||||||| ||||||||||||||||||||  |||||  ||||||||| ||||||||    
T  220530 tcaggagcacttttcttcagacgcttcaaggttcctttttgttgattccatagctctcaatttgttctttcagaacct 220607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 315
Target Start/End: Original strand, 211394 - 211695
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||| |||||| |||||||||||  ||||| ||| || ||| ||  ||||| ||||||| ||||| || |||    
T  211394 agcagagacaaaaacagagtagtggaggtagtagttgtatacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcattaaaa 211493  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || |||||||||||||| |  ||| || ||||||||||||||  ||||||||| || ||||| || |||| | ||||||||||||||  || |||||    
T  211494 tccttacaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaag--ctgcatct 211591  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    |||||||| ||||| |||||| | | |||  |||||| ||| |  ||| ||||| || ||||||||| ||||||| ||||  |||||| ||| |||||||    
T  211592 cctgatgagctacagcttctgataaactt--gcttctgatgaacttgcgtctgaggaccttgcttctaatgacgtcatcacttcaggagcac-tttgtct 211688  T
Q  309 tcaggag 315  Q
    |||||||    
T  211689 tcaggag 211695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 244390 - 244219
Alignment:
Q  20 acaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaa 118  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| |||| | || ||| ||| |||||||||||||||||| ||||||||| |||  |    
T  244390 acaaacagagtagtggaggtagtggttgtacacttcgtacaattgtcctttttcaacgctcttcaaagaacaagcatccaatgtcttcaaatccttttga 244291  T
Q  119 aatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaa 191  Q
    | |||| |||| |||||||||   ||||||||||| ||  || || |||||||||  ||||||||||||||||    
T  244290 attagttgttgcttcactcttctggtcttctgcaacgc-caggcgtgattaaatcttttgaacagcctttgaa 244219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 244056 - 243995
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||||||| |||||||||||||| ||||  ||||||||||||||||||    
T  244056 ttcagatgcttcaagcttccttcttgttgattccattgctctaatttgttcttccagaacct 243995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 377395 - 377317
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||| ||| || ||||||  ||| |||||||||||| ||||||||| |  ||||||||||||||||||||||||    
T  377395 cttcaggagcactactcttcagacactttaagcttccttttagttgattccttagctctcttttgttcttccagaacct 377317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 30661 - 30612
Alignment:
Q  336 aagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  30661 aagcttccattttgttgattcctttgctctcttttgttcttccagaacct 30612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 385
Target Start/End: Complemental strand, 19584 - 19215
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatca 112  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||| || ||| ||||| ||||||||||||||||| || |||||     
T  19584 agagacacaaactgagtagtgaatatagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaacaagcatccaatgcttttaaatcc 19485  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    |||||||||||| |||| |||||||||  ||||||||||||| ||||| ||| ||||||||||||||||| | |||||||||||||||| | ||||||||    
T  19484 tttcaaaatagttgttgcttcactcttctagtcttctgcaattcttaggcgaaattaaatccattgaacaacttttgaagctttaagtcttgcatctcct 19385  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcag 312  Q
     ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||  ||| ||||||    
T  19384 catgaactacaacttctggtgatctt--gcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcacttcaggagcac--ttgacttcag 19289  T
Q  313 gagaactgctattcagatgcttcaagcttcc-tttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| ||| || |||||| ||||||||||||| |||||||||| ||| |  |||||||||||||||||| |||||    
T  19288 gagcacttctcttcagacgcttcaagcttccttttttgttgactccttagctctcttttgttcttccataacct 19215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 281
Target Start/End: Complemental strand, 99320 - 99053
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaacaagcatccaatgccttcaaat 110  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| |  ||| || ||||| ||||||||||||||||  |||    
T  99320 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcagcgct-ttgaagaataagcatccaatgccttgtaat 99222  T
Q  111 catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctc 210  Q
    | || |||||||||||||| |  ||| || | ||| |||||||   ||||||||| || ||||| || |||||| |||||||||||||||  | ||  ||    
T  99221 ccttccaaaatagtcgttgctatacttttccggtcatctgcaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcacttc 99125  T
Q  211 ctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgac 281  Q
    |||||||||||||||||||||| ||||||||||||| ||  |  |||||||||||||||| ||| |||||||    
T  99124 ctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaacttacttttgatgac 99053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 182; Significance: 3e-98; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 5805 - 5432
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| || || |||||||||||||||||||||| |    
T  5805 agcagagacacaaactgagtagtggagatagtagttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatccaatgccttcata 5706  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||  |||| | ||||||| || |||||| |||| ||| ||||||||||||||||||||||| ||||||||||| |||||| | |||||    
T  5705 tcctttcaaaatagatgttgctccactcttccaatcttctacaatacttggacgagattaaatccattgaacaacctttgaagctctaagtcttgcatct 5606  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||| || |||| ||| |||||  ||||||  ||||||||||||||||||||||||||||||||||| ||||  |||||| |||||||  |||    
T  5605 cctgatgaacttcagcttcaggtgatctt--gcttctagtgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttt-actt 5509  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctc-ttttgttcttccagaacct 385  Q
    |||||| ||| || |||||| |||||||| |||||||| ||||||||  || ||||| |||||||||||||||||||    
T  5508 caggagcacttctcttcagacgcttcaaggttccttttagttgattcatttgctctcattttgttcttccagaacct 5432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 181; Significance: 1e-97; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 36890 - 36517
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||| |||||| ||  ||  || ||||||||||||||||||||||||||    
T  36890 agcagagacaaaaacagagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctttaaagaacaagcatccaatgccttcaaa 36791  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||||||||| |||||| ||  |||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | |||||    
T  36790 tcctttcaaattagtcgttgcttcacttttctagtcatctgcaatgcttagacgagattaaattcattgagcagcctttgaagctttaagtcttgcatct 36691  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    | ||||||||| || ||||| || |||||| |||||| ||||||||||||| |||||||||||||||||||||| ||||  |||||| |||| |   |||    
T  36690 cttgatgaacttcagcttctagtgatcttctgcttctgatgagatgcttctaatgaacttgcttctgatgacgtcatcacttcaggagcactat--actt 36593  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
     ||||  ||| || ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||    
T  36592 taggatcacttctcttcagatgcttcaagcttccttttatttgattccattgctctcttttgttcttccataacct 36517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 42115 - 42488
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||| |||||| ||  ||  || ||||||||||||||||||||||||||    
T  42115 agcagagacaaaaacagagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctttaaagaacaagcatccaatgccttcaaa 42214  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||| ||||||||| |||||| ||  |||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | |||||    
T  42215 tcctttcaaattagtcgttgcttcacttttctagtcatctgcaatgcttagacgagattaaattcattgagcagcctttgaagctttaagtcttgcatct 42314  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    | ||||||||| || ||||| || |||||| |||||| ||||||||||||| |||||||||||||||||||||| ||||  |||||| |||| |   |||    
T  42315 cttgatgaacttcagcttctagtgatcttctgcttctgatgagatgcttctaatgaacttgcttctgatgacgtcatcacttcaggagcactat--actt 42412  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
     ||||  ||| || ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||    
T  42413 taggatcacttctcttcagatgcttcaagcttccttttatttgattccattgctctcttttgttcttccataacct 42488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 178; Significance: 6e-96; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 212350 - 212723
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||| ||||||    
T  212350 agcatagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaa 212449  T
Q  110 tcatttcaaaa-tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
    || ||| |||| |||| |||| |||||||||  ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |  |||    
T  212450 tccttttaaaaatagttgttgcttcactcttctagtcttctgcaatgcttagacgagattgaatccatagaatagcctttgaagctttaagtcttggatc 212549  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtct 308  Q
    |||||||||| |  | |||||| | |||||  |||||| |||||||||||||||||||||||||||||||||||| || |  |||||| ||| |||| ||    
T  212550 tcctgatgaagtttagcttctgatgatctt--gcttctgatgagatgcttctgatgaacttgcttctgatgacgtcattacttcaggagcac-tttgact 212646  T
Q  309 tcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||| ||| || |||||| | ||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  212647 tcaggagcacttctcttcagacgtttcaagcttcctttttgttgattccttagctctcttttgttcttccagaacct 212723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 84 - 380
Target Start/End: Complemental strand, 6239 - 5948
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||| ||||||||     
T  6239 aagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacat 6140  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgt 283  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||  |||||||||||||     ||||||||| |||||| ||||||||||||| |    
T  6139 cctttgaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttct-----gatgcttcttatgaacctgcttctgatgactt 6045  T
Q  284 tatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccag 380  Q
    |||||  |||||| |||||||||||||||||| ||| |  ||||||||||||||| || ||||||||||||| | || |||||||||||||||||||    
T  6044 tatcacttcaggagcacttttgtcttcaggagcacttcgcttcagatgcttcaagttttctttttgttgatttctttgctctcttttgttcttccag 5948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 246133 - 246074
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  246133 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 246074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 169; Significance: 2e-90; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 84 - 380
Target Start/End: Original strand, 30294 - 30585
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||| ||||||||     
T  30294 aagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacat 30393  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgt 283  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||  |||||||||||||     ||||||||| |||||| ||||||||||||| |    
T  30394 cctttgaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttct-----gatgcttcttatgaacctgcttctgatgactt 30488  T
Q  284 tatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccag 380  Q
    |||||  |||||| |||||||||||||||||| ||| |  ||||||||||||||| || ||||||||||||| | || |||||||||||||||||||    
T  30489 tatcacttcaggagcacttttgtcttcaggagcacttcgcttcagatgcttcaagttttctttttgttgatttctttgctctcttttgttcttccag 30585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 11 - 265
Target Start/End: Original strand, 9899 - 10151
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||||| || ||| ||| ||||||||||||| ||||||||||||    
T  9899 agcagagacacaaacatagtagtggaggtagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaa 9998  T
Q  110 -tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatc 208  Q
     ||||||  || ||||||||||| |||||||    ||||||||||||| |||||| |||||||||| | |||||||||||||||||||||||    ||||    
T  9999 ttcattt-gaattagtcgttgttgcactcttctgatcttctgcaatgc-tagacgtgattaaatccttagaacagcctttgaagctttaagtttctcatc 10096  T
Q  209 tcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatga 265  Q
    | |||||||||| || |||||||| || ||  |||||| ||||| ||||||||||||    
T  10097 ttctgatgaacttcagcttctggtgatatt--gcttctaatgaggtgcttctgatga 10151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 10175 - 10235
Alignment:
Q  322 tattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaa 382  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||| || ||||||||||||    
T  10175 tattcagatgcttcaagcttccttcttgttgattcaattgctctcattcgttcttccagaa 10235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 162; Significance: 2e-86; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 26087 - 25798
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatca 112  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||| ||  || ||||| ||||||||||||||||||||||||||     
T  26087 agagacacaaactgagtagtcgagatagtggttgtacacttcatacaattgtactatgtcaaccctcttcaaagaacaagcatccaatgccttcaaatcc 25988  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||||||||||| |||||| || ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||    
T  25987 tttcaaaatagtcgttgcttcacttttccagtcttttgcaatgcttagacgagattaaatccattgaacaacctttgacgctttaagtcttgcatctcct 25888  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactt 302  Q
    ||||| ||  | |||||||| ||||||||||||| |||||||| || | |||||| ||||||||||||||| ||||  |||||| |||||    
T  25887 gatgagctttagcttctggtgatcttcagcttctgatgagatgtttttcatgaacgtgcttctgatgacgtcatcacttcaggagcactt 25798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 44782 - 44652
Alignment:
Q  48 tacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtct 146  Q
    ||||||||||||||||||| | ||| || ||| ||||| ||||||||||| |||||||||||||| ||||||||||| ||||| |||||| || ||||||    
T  44782 tacacttcgtacaattgtattatgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcctttcaaaatagacgttgcttcacttttccagtct 44683  T
Q  147 tctgcaatgcttagacgagattaaatccatt 177  Q
    ||| |||| ||||||||||||||||||||||    
T  44682 tctacaatacttagacgagattaaatccatt 44652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 25811 - 25733
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||| ||| || |||||| || | || ||||||||||||||||||| || ||||||||||||||||||||||||    
T  25811 cttcaggagcacttctcttcagacgccttaatcttcctttttgttgattcctttgctctcttttgttcttccagaacct 25733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 11 - 385
Target Start/End: Complemental strand, 27544 - 27186
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||||| || ||| ||  |||| |||||||||||||||||| ||    
T  27544 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaatggtactttgtcaacgctctttgaagagcaagcatccaatgccttcgaa 27445  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || | |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| | |||||    
T  27444 tcctatcaaaatagctgttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattgaacaacctttgaagctttaagtcttgcatct 27345  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||| || | |||||| ||||                ||||||||||||||||||||||||||| || ||||  |||||| ||| |||| |||    
T  27344 cctgatgaacttcagcatctggtgatct----------------tgcttctgatgaacttgcttctgatgatgtcatcacttcaggagcac-tttgcctt 27262  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| || ||| || |||||||||||||||||||||||||||||||||| || |||||||||||| || ||||||||    
T  27261 cagaagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttatttcagaacct 27186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 84 - 357
Target Start/End: Complemental strand, 827 - 556
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    |||||||||||||||||||||||||||| |||||||||||||  || |||||| || |||||||||||||||||||||||||||||||| ||||||||||    
T  827 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcagtgcttcactattccagtcttctgcaatgcttagacgagattaaattcattgaacag 728  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgt 283  Q
     |||||||| |||||||| | ||||||||||||||||  | |||||||| |||||  |||||| |||||||||||||||||||||||||||| |||||||    
T  727 tctttgaagttttaagtcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttctaatgacgt 630  T
Q  284 tatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattcc 357  Q
     ||||  |||||| |||||||||||||||||| ||| || ||||||  ||| ||||||||||||||||||||||    
T  629 catcacttcaggagcacttttgtcttcaggagcacttctcttcagacactttaagcttcctttttgttgattcc 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 153; Significance: 5e-81; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 11 - 281
Target Start/End: Original strand, 14644 - 14913
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| || ||| ||||| | ||||||||||||||||||||||    
T  14644 agcagagacacaaactgagtagtggaggtagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagtacaagcatccaatgccttcaaa 14743  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| |    
T  14744 tcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcattt 14843  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgac 281  Q
    ||| ||||  |  | |||||||| |||||  |||||| |||||||| |||| ||||||| ||||||||||||    
T  14844 cctaatgatttttagcttctggtgatctt--gcttctgatgagatgtttctaatgaactagcttctgatgac 14913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 14953 - 15031
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||| ||||| ||| || ||||||  ||| ||||||| |||||||||||||| |  ||||||||||||||||||||||||    
T  14953 cttaaggagcacttctcttcagacactttaagcttcatttttgttgattccttcgctctcttttgttcttccagaacct 15031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 288
Target Start/End: Original strand, 22672 - 22951
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||| |||| |||||||||||||||| ||  || ||  ||||| ||||||||||||||||||||    
T  22672 agcagagacaaaaacagagtagtggaggtagtggttgtacgcttcatacaattgtactttgtcaacactctttgaagaataagcatccaatgccttcaaa 22771  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||    
T  22772 tcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatct 22871  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatca 288  Q
    |||||||||||||| | |||||| ||||||||||||| ||| |  |||||||| || ||||| |||||||||||| ||||    
T  22872 cctgatgaactacagcctctggtgatcttcagcttctgatgaacttgcttctggtggacttgattctgatgacgtcatca 22951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 22952 - 23024
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||| | | || |||||| |||| ||||||| |||||||||||||  || |||||| |||||||||||    
T  22952 cttcaggagtagttctcttcagacgctttaagcttcatttttgttgattcttttgctctctattgttcttcca 23024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 151; Significance: 8e-80; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 45 - 385
Target Start/End: Original strand, 9825 - 10163
Alignment:
Q  45 ttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcag 143  Q
    |||||||||| ||||||||||||| ||| || ||| ||||| | ||||||||||||||| ||||| || ||||||||||||||||  ||||||||||  |    
T  9825 ttgtacactttgtacaattgtactatgtcaacgctcttcaaagcacaagcatccaatgctttcaagtcctttcaaaatagtcgttacttcactcttttgg 9924  T
Q  144 tcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagct 243  Q
    ||||||  |||||||||||||||||||||||||| ||||  | |||||||||||| || | ||||||| |||||||| || |||||||| |||||  |||    
T  9925 tcttctataatgcttagacgagattaaatccattaaacaaaccttgaagctttaaatcttgcatctccagatgaacttcagcttctggtgatctt--gct 10022  T
Q  244 tcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcc 343  Q
    | | |||||||||||||||| ||||||||||||||||||| ||||  |||||| ||| |||| |||||| || | | || ||||||||||||||||||||    
T  10023 tatgatgagatgcttctgattaacttgcttctgatgacgtcatcacttcaggagcac-tttgacttcagaagcatttctcttcagatgcttcaagcttcc 10121  T
Q  344 tttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||||||||| ||||||||||||||| ||||||||    
T  10122 tttttgttgattccattcctctcttttgttctttcagaacct 10163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 7823 - 7858
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgta 49  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7823 agagacacaaactgagtagaggagatagtggttgta 7858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 20 - 385
Target Start/End: Original strand, 7708 - 8059
Alignment:
Q  20 acaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaa 118  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||  ||||| || ||| ||||||||| ||||| || |||    
T  7708 acaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaacatacaatgcctttaaatccttccaa 7807  T
Q  119 aatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaa 218  Q
    ||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  7808 aatagtcgtggcttcactcttccagtcttttgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcctgatgaa 7907  T
Q  219 ctacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaac 318  Q
     || | |||||||| |||||||              ||||||||||||||||||| | ||||||| | || ||| ||| ||| |||||||||||||| |     
T  7908 atagagcttctggtgatcttca--------------gcttctgatgaacttgcttttaatgacgtcaccacctcgggagcac-tttgtcttcaggagcaa 7992  T
Q  319 tgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |  | |||||| |||| |||||| ||||||||||||||| || |||||| |||||||||||||||||    
T  7993 ttttcttcagacgctttaagctttctttttgttgattcctttgctctctattgttcttccagaacct 8059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 11 - 383
Target Start/End: Original strand, 1686 - 2071
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||| | ||||||||||||||||||||||    
T  1686 agcagagacacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagtacaagcatccaatgccttcaaa 1785  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||| |||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| |    
T  1786 tcctttcaaaatagttgttgcttcactcctccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcattt 1885  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagat---------------gcttctgatgaacttgcttctgatgacgttatcagctcag 294  Q
    ||| ||||  |  | ||||| || |||||  |||||| |||||||               ||||||||||| ||||||||||||||||| ||||  |||     
T  1886 cctaatgatttttagcttctagtgatctt--gcttctgatgagatgtttctaatgaactagcttctgatgaccttgcttctgatgacgtcatcacttcat 1983  T
Q  295 gatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaac 383  Q
    || ||| |||| ||||||||| ||| || ||||||  ||| ||||||| |||||||||||||| |  ||||||||||||||||||||||    
T  1984 gagcac-tttgacttcaggagcacttctcttcagacactttaagcttcatttttgttgattccttcgctctcttttgttcttccagaac 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 136; Significance: 7e-71; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 11 - 379
Target Start/End: Complemental strand, 90170 - 89818
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| ||| |||||||||||||||||| ||||| ||||| || ||| ||  ||||||||||||||||||||||||||    
T  90170 agcagagacaaaaacagagtagtggaggtaggggttgtacacttcgtacacttgtattttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 90071  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||| ||||| ||||||||| |||||||||| ||| ||||||||||||||||| |||||| || |||||||||||||||||  | |||||    
T  90070 tcctttcaaaatagccgttggttcactcttccagtcttctgtaatacttagacgagattaaatacattgatcaacctttgaagctttaagt--tgcatct 89973  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
    ||||||||||| || |||||||| || ||||              ||||||||||||||||||||||||||||| | ||  |||||| ||| ||||||||    
T  89972 cctgatgaactgcagcttctggtgattttca--------------gcttctgatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctt 89888  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
    |||||  | |  | |||||| |||| |||||||||||||||||||||| || |||||| |||||||||||    
T  89887 caggaacaattttcttcagacgctttaagcttcctttttgttgattcctttgctctctattgttcttcca 89818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 134; Significance: 1e-69; HSPs: 2)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 15116 - 15341
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatca 112  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| |||||| |||||||||| ||||||||     
T  15116 agagatacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaatcatccaatgctttcaaatcc 15215  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    |||||||||||||| || |||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  15216 tttcaaaatagtcgatgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgatcagcctttgaagctttaagtcttgcatctcct 15315  T
Q  213 gatgaactacaacttctggttatctt 238  Q
     ||| ||| || |||||||| |||||    
T  15316 tatgcacttcatcttctggtgatctt 15341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 385
Target Start/End: Original strand, 15328 - 15455
Alignment:
Q  256 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgatt 355  Q
    |||||| ||| ||||||||||||||||| ||||  |||| | |||||  | ||||||||| ||| || |||||| |||| ||||||||||||||||||||    
T  15328 cttctggtgatcttgcttctgatgacgtcatcacttcagaagcactt--gacttcaggagcacttctcttcagacgctttaagcttcctttttgttgatt 15425  T
Q  356 ccattactctcttttgttcttccagaacct 385  Q
    || |  |||||||||||||||  |||||||    
T  15426 ccttagctctcttttgttcttaaagaacct 15455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 133; Significance: 5e-69; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 1656 - 1884
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||  |||||||||| ||||||||||||||||| |||||||||||||||| || ||| ||||| ||  ||||||||||||| ||||||    
T  1656 agcagagacaaaaacaaagtagtggaggtagtggttgtacacttcctacaattgtactttgtcaacgctcttcaaagagtaagcatccaatgctttcaaa 1755  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||||||||||||||||||  |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| | |||||    
T  1756 tcctttcaaaatagtcgttgtttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaacaacctttgaagctttaagtcttgcatct 1855  T
Q  210 cctgatgaactacaacttctggttatctt 238  Q
    ||||||||||| || |||||||| |||||    
T  1856 cctgatgaacttcagcttctggtgatctt 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 255 - 385
Target Start/End: Original strand, 1870 - 2000
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgat 354  Q
    ||||||| ||| ||||||||||||||||| ||||  |||||| || ||| ||||||||||| ||| || | ||||||||| ||||||||||||| |||||    
T  1870 gcttctggtgatcttgcttctgatgacgtcatcacttcaggagcattttagtcttcaggagcacttctctgcagatgctttaagcttcctttttattgat 1969  T
Q  355 tccattactctcttttgttcttccagaacct 385  Q
    ||| || ||||||||||||||||||| ||||    
T  1970 tcctttgctctcttttgttcttccaggacct 2000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 132; Significance: 2e-68; HSPs: 3)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 10220 - 9981
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaagaa-caagcatccaatgccttcaaatca 112  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||| || ||| || || || |||||||||||||||||||||||     
T  10220 agagacacaaacagagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgctctttaaaaaacaagcatccaatgccttcaaatcc 10121  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacatctcc 211  Q
    ||||||||||||||||| |||||||||  |||||||||||| ||||||| |||||||||||||||||||| || |||||||||||||||| | |||||||    
T  10120 tttcaaaatagtcgttgcttcactcttctagtcttctgcaaagcttagatgagattaaatccattgaacaaccttttgaagctttaagtcttgcatctcc 10021  T
Q  212 tgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||||||| || |||||||| || ||||| |||| ||||    
T  10020 tgatgaacttcagcttctggtgattttcagtttctgatga 9981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 307 - 383
Target Start/End: Complemental strand, 9956 - 9880
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaac 383  Q
    ||||||||| ||| || |||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9956 cttcaggagcacttctcttcatattcttcaagcttcctttttgttgattccattgctctcttttgttcttccagaac 9880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 14884 - 14826
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgt 72  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  14884 agagacacaaacagagtagtggaggtagtggtcgtacacttcgtacaattgtactttgt 14826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 131; Significance: 7e-68; HSPs: 6)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 84 - 385
Target Start/End: Original strand, 39495 - 39781
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    ||||||| ||||| |||||||||||||| ||||||| |||| |||| |||||||||  |||||| || ||||| ||||||||||||||||||||||||||    
T  39495 aagaacatgcatctaatgccttcaaatcctttcaaattagttgttgcttcactcttctagtcttttgtaatgcctagacgagattaaatccattgaacag 39594  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgt 283  Q
    ||||||||||||||| || | ||||||||||||||||| | |||||||| |||||||              ||||||||||||||||||||||||| |||    
T  39595 cctttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttca--------------gcttctgatgaacttgcttctgatgtcgt 39680  T
Q  284 tatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaac 383  Q
    ||| |  ||| || ||| |||| ||||||||| ||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  39681 tatgacttcaagagcac-tttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaac 39779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 84 - 385
Target Start/End: Original strand, 137555 - 137841
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    ||||||| ||||| |||||||||||||| ||||||| |||| |||| |||||||||  |||||| || ||||| ||||||||||||||||||||||||||    
T  137555 aagaacatgcatctaatgccttcaaatcctttcaaattagttgttgcttcactcttctagtcttttgtaatgcctagacgagattaaatccattgaacag 137654  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgt 283  Q
    ||||||||||||||| || | ||||||||||||||||| | |||||||| |||||||              ||||||||||||||||||||||||| |||    
T  137655 cctttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttca--------------gcttctgatgaacttgcttctgatgtcgt 137740  T
Q  284 tatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaac 383  Q
    ||| |  ||| || ||| |||| ||||||||| ||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  137741 tatgacttcaagagcac-tttgacttcaggagcacttctcttcagatgcttcaagcttcctttttgttgattcctttgctctcttttgttcttccagaac 137839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 159051 - 159241
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||  |||||| ||| |||||||| |||||||| ||||||||| |||||| || ||| ||| ||||||||||||  ||||||||||||    
T  159051 agcagagacacaaacaaagtagtagaggtagtggttttacacttcatacaattgtcctttgtcaacgctcttcaaagaacaagcatataatgccttcaaa 159150  T
Q  110 -tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc 201  Q
     ||||||  || ||| ||||| |||||||||    |||| ||||||| ||||||| |||||||||| ||||||| ||||||||||| ||||||    
T  159151 ttcattt-gaattagccgttgcttcactcttctgatcttttgcaatg-ttagacgtgattaaatcctttgaacatcctttgaagctctaagtc 159241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 385
Target Start/End: Original strand, 159296 - 159437
Alignment:
Q  241 gcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagct 340  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||||  |||||| ||||     | ||| ||| ||| |  |||||||||||||||||    
T  159296 gcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactaaa--catcatgagcacttcc-ttcagatgcttcaagct 159392  T
Q  341 tcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    || || |||||||||||||| ||||| ||||||||||||||||||    
T  159393 tctttcttgttgattccattgctctcatttgttcttccagaacct 159437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 37398 - 37458
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttg 71  Q
    |||||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  37398 agcagagacaaaaatagagtagtggaggtagtggttgtacacttcgtacaattgtactttg 37458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 135458 - 135518
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttg 71  Q
    |||||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  135458 agcagagacaaaaatagagtagtggaggtagtggttgtacacttcgtacaattgtactttg 135518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 11 - 238
Target Start/End: Original strand, 9965 - 10193
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||| |||||||||||||||| ||||||||||||||||| || ||| ||||| ||  ||||||||||||| ||||||    
T  9965 agcagagacaaaaacagagtagtggaggtagtggttgtacactttgtacaattgtactttgtgaacgctcttcaaagagtaagcatccaatgctttcaaa 10064  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||  |||||||||  |||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| | |||||    
T  10065 tcctttcaaaatagtcgttacttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaatagcctttgaagctttaagtcttgcatct 10164  T
Q  210 cctgatgaactacaacttctggttatctt 238  Q
    ||||||||||| |||||||| || |||||    
T  10165 cctgatgaacttcaacttcttgtgatctt 10193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 10228 - 10306
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||| ||| || ||||||||||||||||||||||||| |||||||  |   |||||||||||||||||||||||    
T  10228 cttcaggagcacttctcttcagatgcttcaagcttcctttttattgattctttagatctcttttgttcttccagaacct 10306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 10193 - 10241
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactt 302  Q
    |||||||||||||||||||||||||||||| ||||  |||||| |||||    
T  10193 tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 10241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 28 - 385
Target Start/End: Original strand, 103585 - 103926
Alignment:
Q  28 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcg 126  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| || ||| ||  |||||||||||||||||||||| | ||||||||||||||| ||    
T  103585 agtagtggaggtagtggttgcacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttaatatcatttcaaaatagccg 103684  T
Q  127 ttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaact 226  Q
    ||| ||||||||| ||||||||||||||| |||||| | ||||||| |||| |||| ||||| |||||||||||| | |||||||||||||||| || ||    
T  103685 ttgcttcactcttccagtcttctgcaatgtttagacaaaattaaattcatttaacaacctttcaagctttaagtcttgcatctcctgatgaacttcagct 103784  T
Q  227 tctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattc 326  Q
    ||||||   |||  |||||| ||||||               | ||||||||||||| ||||  | || | ||||||||||||||||||  || || |||    
T  103785 tctggtgtcctt--gcttctgatgaga---------------tacttctgatgacgtcatcactttagtagcacttttgtcttcaggagcgcttctcttc 103867  T
Q  327 agatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||| |||||||||||  || ||||||||||||||| ||||||||    
T  103868 agatgcttcaagcttcctatttgttgattcatttgctctcttttgttctttcagaacct 103926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 121; Significance: 7e-62; HSPs: 4)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 19027 - 19263
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||   || ||| ||  ||||||||||||| |||||||| |||    
T  19027 agcagagacaaaaactgagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaagaacaagcatcaaatgcctttaaa 19126  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || |||||||| ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |  |||     
T  19127 tccttccaaaatagccgttgcttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaacagcctttcaagctttaagtcttgtatca 19226  T
Q  210 cctgatgaactacaacttctggttatcttcagcttct 246  Q
    ||||||||| || | |||||||| ||||||| |||||    
T  19227 cctgatgaaatagagcttctggtgatcttcaacttct 19263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 11 - 281
Target Start/End: Complemental strand, 22246 - 21976
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctg-ttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||||||||  ||| | ||| || |||  || ||||| ||||||||||||||||| ||    
T  22246 agcagagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctcattgaagaataagcatccaatgccttccaa 22147  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||  || |||||||||| |  |||  | ||||||||||||||  ||||||||| || ||||| || |||| | |||||| ||||||||  | |||||    
T  22146 tccttcaaagatagtcgttgctatacttctccagtcttctgcaatctttagacgagttttaatcctttaaacaacttttgaacctttaagt--tgcatct 22049  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgac 281  Q
     || ||||||||||||||||||| ||   |||||||| ||  |  ||||||||||||||||||||||||||||    
T  22048 tctaatgaactacaacttctggtgattcacagcttctgataaacttgcttctgatgaacttgcttctgatgac 21976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 14 - 232
Target Start/End: Original strand, 9559 - 9775
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctg-ttcaagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| | ||||| ||| || |||| ||  |||| |||||||||||||| |  ||||     
T  9559 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacagtcgtactatgtcaacgctgtttgtagaataagcatccaatgcccttcaatcc 9658  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||||||||||| |  ||| |  |||||||||||||| ||||||| || || ||||| |  |||| | |||||||||||||||  | ||||||||    
T  9659 tttcaaaatagtcgttgctatactttcccagtcttctgcaat-cttagacaagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 9755  T
Q  213 gatgaactacaacttctggt 232  Q
    |||||||| || ||||||||    
T  9756 gatgaactgcagcttctggt 9775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 19343 - 19404
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||||| |||||||||||||||||||||| || |||||| |||||||||||||||||    
T  19343 ttcagatgctttaagcttcctttttgttgattcctttgctctctattgttcttccagaacct 19404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 13567 - 13741
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| || ||| ||||| |||||| |||||||||||||||||    
T  13567 agcagagacacaaactgagtagtggagatagtggttgtacactttgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgccttcaaa 13666  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagc 184  Q
    || |||||||||||| |||| |||||| || || |||||||||||||||||||||||||||||||||||||||||    
T  13667 tcctttcaaaatagttgttgcttcactattccaatcttctgcaatgcttagacgagattaaatccattgaacagc 13741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 254 - 385
Target Start/End: Original strand, 13850 - 13981
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttga 353  Q
    |||||||||||||||||||||||||||| | || |  |||||| |||||||||||||||||| ||| || ||| || || | |||||||||||| |||||    
T  13850 tgcttctgatgaacttgcttctgatgacatcattacttcaggagcacttttgtcttcaggagcacttctcttctgacgcattaagcttccttttcgttga 13949  T
Q  354 ttccattactctcttttgttcttccagaacct 385  Q
    |||| || ||||||||||||||||||||||||    
T  13950 ttcctttgctctcttttgttcttccagaacct 13981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 11 - 357
Target Start/End: Original strand, 15789 - 16121
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa-ttgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaa 108  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| ||| || ||| ||| |||||||||||||||||||||||||    
T  15789 agcagagacacaaactgagtagtagagatggtggttgtacacttcgtacaatttgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaa 15888  T
Q  109 atcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaac-agcctttgaagctttaagtcctacat 207  Q
     || |||||||||| | | || ||||||| |   ||||| |||||| ||| ||||||||| |||||||||||| | | |||||||||||||||| | |||    
T  15889 gtcctttcaaaataattggtgcttcactcctctggtcttttgcaattcttggacgagattgaatccattgaacaatcttttgaagctttaagtcttgcat 15988  T
Q  208 ctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtc 307  Q
    |||||||||||                 ||| ||||||| |||||||| |||||||||||||||||||||||| || ||||  ||| || |||||||| |    
T  15989 ctcctgatgaa-----------------ctttagcttctgatgagatggttctgatgaacttgcttctgatgatgtcatcacttcatgagcacttttgac 16071  T
Q  308 ttcaggagaactgctattcagatgcttcaagcttcctttttgttgattcc 357  Q
    |||||||| ||  || ||||||||||||||||||||||||||||||||||    
T  16072 ttcaggagcacatctcttcagatgcttcaagcttcctttttgttgattcc 16121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 11 - 385
Target Start/End: Original strand, 6003 - 6359
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    ||||||||||||||  ||||||| ||| |||||||||||||||| ||||||||||||||||| || ||| ||| ||||||||||||||||||||||||||    
T  6003 agcagagacacaaatagagtagtagaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaa 6102  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||  || |||| |||| |||  ||||   |||||||||||||| ||| || |||||||||| |||||||| |||||||||||||| ||   |||||    
T  6103 tccttttgaattagttgttgcttcggtcttctggtcttctgcaatgc-taggcgtgattaaatcctttgaacagtctttgaagctttaaatctctcatct 6201  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtctt 309  Q
     |||||||||| |||||||| || || |                |||||||||||||||||||||||||||||| ||||  |||||| |||  ||| |||    
T  6202 tctgatgaacttcaacttctagtgatat----------------tgcttctgatgaacttgcttctgatgacgtcatcacttcaggaacac--ttgactt 6283  T
Q  310 caggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| |||  | |||||||||||||||||||||| |||||||||||||| ||||| |||||||||| |||||||    
T  6284 caggagcacttttcttcagatgcttcaagcttccttcttgttgattccattgctctcatttgttcttctagaacct 6359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 215612 - 215340
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||  |||| ||||||||||| |||||||||||||||||||||||  ||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  215612 agcagagacgaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaa 215513  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||| ||||| |||||| ||  |||||||||||||  ||||||||| || |||||||| |||||| ||||||| |||||||  | |||||    
T  215512 tcctttcaaaatagccgttgcttcacttttctagtcttctgcaatctttagacgagtttgaatccattaaacagcttttgaagttttaagt--tgcatct 215415  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgacgt 283  Q
    |||||| |||| || |||||||| || ||| |||||| ||  |  ||||||||||||||||||||||||||||||    
T  215414 cctgataaactgcagcttctggtgattttcggcttctgataaacttgcttctgatgaacttgcttctgatgacgt 215340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 11 - 280
Target Start/End: Complemental strand, 6855 - 6586
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||  ||||| ||||| |||||||||||||||||||||||  ||||||||| || ||| ||  ||||||||||||||||||||||||||    
T  6855 agcagagacaaaaatagagtactggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaagaacaagcatccaatgccttcaaa 6756  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || |||||||||||||| || |||||| || |||||||||||||| ||||||| || || ||||| || |||||| |||||||||||||||  | |||||    
T  6755 tcttttcaaaatagtcggtgcttcacttttccagtcttctgcaatccttagacaagtttgaatccgttaaacagcttttgaagctttaagt--tgcatct 6658  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatga 280  Q
    |||||||||||||| |||||||| ||  ||||||||| ||  |  ||||||||||||||| |||| ||||||    
T  6657 cctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgaactagcttttgatga 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 108; Significance: 4e-54; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 131 - 302
Target Start/End: Complemental strand, 4987 - 4816
Alignment:
Q  131 ttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctg 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||| ||||||| || ||||| ||    
T  4987 ttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcttgatgaattaaaacttttg 4888  T
Q  231 gttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactt 302  Q
    || |||| |||||||| || |||||||| |||||||||||||| ||||||||||||||  |||||| |||||    
T  4887 gtgatctccagcttctaataagatgcttttgatgaacttgcttttgatgacgttatcacttcaggagcactt 4816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 4829 - 4751
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||| ||| || |||||| |||| |||||||||||||||||||||| || ||| |||||||||||| |||||||    
T  4829 cttcaggagcacttctcttcagacgctttaagcttcctttttgttgattcctttgctcccttttgttcttctagaacct 4751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 304
Target Start/End: Original strand, 9952 - 10244
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| || ||| ||| ||||||||||||| ||||||||||||    
T  9952 agcagcgacacaaactgagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatcgaatgccttcaaa 10051  T
Q  110 -tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcc-tttgaagctttaagtcctacat 207  Q
     ||||||  || ||| ||||| |||||||||   |||||||||||||| ||| || ||||||||||||||||||||| ||||||||||||||||    ||    
T  10052 ttcattt-gaattagccgttgcttcactcttatggtcttctgcaatgc-taggcgtgattaaatccattgaacagccatttgaagctttaagtctcttat 10149  T
Q  208 ctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactttt 304  Q
    || |||||||||| || |||||||| | ||| ||||||||||  | ||| |||||||||||||  ||||||||||| ||||  |||||| |||||||    
T  10150 cttctgatgaacttcagcttctggtgaactttagcttcttatatggtgc-tctgatgaacttg-atctgatgacgtcatcacttcaggagcactttt 10244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 99; Significance: 9e-49; HSPs: 3)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 230
Target Start/End: Complemental strand, 767 - 552
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| ||||||||||| |||||||||||||||| ||||||  ||||||||| || ||| ||  ||||||||||||||||||||||||||||     
T  767 agagacaaaaacagagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 668  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||||||||||| |||||| || ||||||||||||||  ||||||||| || |||||||  |||||| | |||||||||||||  | ||||||||    
T  667 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccatcaaacagcttctgaagctttaagt--tgcatctcct 570  T
Q  213 gatgaactacaacttctg 230  Q
    |||||||| || ||||||    
T  569 gatgaactgcaccttctg 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 379
Target Start/End: Complemental strand, 557 - 435
Alignment:
Q  256 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgatt 355  Q
    |||||||||||||||||||||||||||| | ||  |||||| |||||| ||||||||||| | |  | |||||| |||| ||||||||||||||||||||    
T  557 cttctgatgaacttgcttctgatgacgtcaccacttcaggagcacttt-gtcttcaggagcagttttcttcagacgctttaagcttcctttttgttgatt 459  T
Q  356 ccattactctcttttgttcttcca 379  Q
    || || |||| | |||||||||||    
T  458 cctttgctctttattgttcttcca 435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 1865 - 1672
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatcatt 114  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||  ||| | ||| || |||  || ||||| ||||||||||||         ||||    
T  1865 agacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatg---------catt 1775  T
Q  115 tcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctga 214  Q
    ||||||||| |||||    ||| || ||||||||||||||| |||| |||| || ||||| |  |||| | |||||||||||||||  | ||||||||||    
T  1774 tcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggcgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcctga 1678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 143158 - 143325
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    |||||||||||||||||||||| ||||| || |||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||| ||    
T  143158 aagaacaagcatccaatgcctttaaatccttccaaaatagtcgttgcttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatag 143257  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatga 251  Q
    ||||| ||||||| |||| | |||||| ||||||| || | ||||| || ||||||||||||| ||||    
T  143258 cctttcaagctttgagtcttgcatctcgtgatgaaatagagcttctagtgatcttcagcttctgatga 143325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 385
Target Start/End: Original strand, 143399 - 143460
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| |||| ||||||||||||| |||||||| || |||||| |||||||||||||||||    
T  143399 ttcagacgctttaagcttcctttttcttgattcctttgctctctattgttcttccagaacct 143460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 78481 - 78261
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||  ||||||| || |||||||||||||||||||||||  ||||||||| || ||| || || ||| ||||||||||||||||||||    
T  78481 agcagagacaaaaacatagtagtgtaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaataagcatccaatgccttcaaa 78382  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| || ||||||||||||||  ||||||||| || |||||  | || ||| ||||||||||||||  || |||||    
T  78381 tcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgataaatagcttttgaagctttaag--ctgcatct 78284  T
Q  210 cctgatgaactacaacttctggt 232  Q
    | |||||||||||| ||||||||    
T  78283 catgatgaactacagcttctggt 78261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 281
Target Start/End: Original strand, 3300 - 3570
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||| ||||||| |||||||||||||||| ||||||  ||||| | | || ||| ||  ||||| || |||||||||||||||||    
T  3300 agcagagacaaaaacagagcagtggaggtagtggttgtacactttgtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaa 3399  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || |||||||| |||||||  ||| || || |||||||||||  ||||||||| || ||||| || |||||| |||||||||||||||  | |||||    
T  3400 tccttccaaaatagccgttgttatacttttccaatcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcatct 3497  T
Q  210 cctgatgaactacaacttctggttatcttcagcttcttat-gagatgcttctgatgaacttgcttctgatgac 281  Q
    |||||||||||| | |||||||| || |||||||||| ||  |  ||||||||||||||||||||||||||||    
T  3498 cctgatgaactatagcttctggtgattttcagcttctgataaacttgcttctgatgaacttgcttctgatgac 3570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 14 - 232
Target Start/End: Original strand, 60802 - 61019
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| || ||| ||  |||||||||||| |||||||||| ||||     
T  60802 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaacaagcattcaatgccttccaatcc 60901  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    || |||||||| ||||| |  ||| || ||||||||||||||  ||||||||| |||||||| || |||| | ||||||| |||||||  | ||||||||    
T  60902 ttccaaaatagccgttgctatacttttccagtcttctgcaatttttagacgagtttaaatcctttaaacaacttttgaagttttaagt--tgcatctcct 60999  T
Q  213 gatgaactacaacttctggt 232  Q
    ||||||||||||||||||||    
T  61000 gatgaactacaacttctggt 61019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 9151 - 9384
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||| ||||| ||||  ||||||||||||||||||||||||||||||||||  ||||| ||| || |||  || ||||| ||||||||||||||||| ||    
T  9151 agcatagacaaaaacacagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttctaa 9250  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || || |||||||||||||| |  ||| || || ||||||||||| ||| || ||| || ||||| || |||||| |||||||||||||||  | |||||    
T  9251 tccttccaaaatagtcgttgctatacttttccaatcttctgcaat-ctttgatgagtttgaatccgttaaacagcttttgaagctttaagt--tgcatct 9347  T
Q  210 cctgatgaactacaacttctggttatcttcagcttct 246  Q
    ||||||||||||||||||||||| ||  |||||||||    
T  9348 cctgatgaactacaacttctggtgattctcagcttct 9384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 315
Target Start/End: Complemental strand, 7260 - 6968
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaa 120  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||  ||| || | ||||  ||||| ||||||||||||| ||| |||| || |||||    
T  7260 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtaccatgtcaacgttgtttgaagaataagcatccaatgctttccaatccttccaaaa 7161  T
Q  121 tagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaact 220  Q
    ||||||||| |  ||| || ||||||||||||||  | ||||| | || ||||| |  |||||| |||||||||||||||  | ||||||||||||||||    
T  7160 tagtcgttgctatacttttccagtcttctgcaatcttcagacgggtttgaatccttcaaacagcttttgaagctttaagt--tgcatctcctgatgaact 7063  T
Q  221 acaacttctggttatcttcagcttcttatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||| |||||||| ||   |||||||| ||| |  |||||||||| |  |||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  7062 acagcttctggtgattcacagcttctgatgaacttgcttctgataacattgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 6968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 1814 - 1606
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||| |||| || |||||||||||||||||||| ||  ||||||||| || ||| ||  |||||||| |||||| ||||||||||    
T  1814 agcagagacaaaaacagagcagtgaaggtagtggttgtacacttcgtaaaaacgtactttgtcaacgctctttgaagaacaatcatccagtgccttcaaa 1715  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatct 209  Q
    || ||||||||||||||||| |||||| ||  |||||||||||||  ||| ||||| || |||||||| |||||| ||||||||||| |||  | |||||    
T  1714 tcctttcaaaatagtcgttgcttcacttttcaagtcttctgcaatatttaaacgagtttgaatccattaaacagcttttgaagctttgagt--tgcatct 1617  T
Q  210 cctgatgaact 220  Q
    |||||||||||    
T  1616 cctgatgaact 1606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 283
Target Start/End: Complemental strand, 497 - 469
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgt 283  Q
    |||||||||||||||||||||||||||||    
T  497 gcttctgatgaacttgcttctgatgacgt 469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 5717 - 5529
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| ||||  |||||||||| ||||||||||||||||| || || |||||||||| || ||| ||  ||||| ||||||| ||||||||||||    
T  5717 agcagagacaaaaacatagtagtggaggtagtggttgtacacttcatataaatgtactttgtcaacgctctttgaagaataagcatcaaatgccttcaaa 5618  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaa 198  Q
    || |||||||||||| |||| || ||| || ||||||||||||||  ||||||||| || |||||||| |||| | |||||| ||||||    
T  5617 tcctttcaaaatagttgttgctttacttttccagtcttctgcaatctttagacgagtttgaatccattaaacaacttttgaatctttaa 5529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 70; Significance: 2e-31; HSPs: 5)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 288
Target Start/End: Complemental strand, 36281 - 36024
Alignment:
Q  29 gtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaatcatttcaaaatagtcgt 127  Q
    ||||||||||||||||||||||||||||||||||||| | || | ||  || | ||| ||| |||||||||||||||| ||| |  ||  ||||||| ||    
T  36281 gtagtggagatagtggttgtacacttcgtacaattgtccattttcaactctctccaacgaaaaagcatccaatgcctttaaaaccatttgaaatagttgt 36182  T
Q  128 tgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaactt 227  Q
    || |||| |||| ||||||||||||||| | ||||| ||||||||| |||||||| |||||||||||| || |    ||  | ||||||| || || |||    
T  36181 tgcttcattcttccagtcttctgcaatgat-agacgtgattaaatcaattgaacaacctttgaagcttcaattttctcagattctgatgatcttcagctt 36083  T
Q  228 ctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatca 288  Q
     |||| || ||  |||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  36082 atggtgatgtt--gcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatca 36024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 315
Target Start/End: Complemental strand, 25777 - 25486
Alignment:
Q  14 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatca 112  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||  ||||| ||| || ||| ||  ||||| |||||||||||||         |    
T  25777 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaagaataagcatccaatgc---------a 25687  T
Q  113 tttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcct 212  Q
    ||||||||||   ||||    ||| || ||||||| ||||||   ||| |||| || ||||| |  |||| | |||||| ||||||||  | ||||||||    
T  25686 tttcaaaatatctgttgccatacttttccagtcttttgcaatttctaggcgagtttgaatccttgaaacaacttttgaaactttaagt--tgcatctcct 25589  T
Q  213 gatgaactacaacttctggttatcttcagcttcttatga-gatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttca 311  Q
    |||||||| || |||||||| ||    ||||||| |||| | |||||||||||||||||||||||||||||| ||||  |||||| ||| ||||||||||    
T  25588 gatgaactgcagcttctggtgatacatagcttctgatgaagttgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttca 25490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 34699 - 34640
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  34699 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 34640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 34919 - 34827
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgc 102  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||| |||||  ||||| ||| || |||  || ||||| |||||||||||||    
T  34919 agcagagacaaaaacagagtagtggaggtagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 34827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 385
Target Start/End: Complemental strand, 35977 - 35924
Alignment:
Q  332 cttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||| ||||| | |||||||||| ||| ||||| ||||||||||||||||||    
T  35977 cttcaaacttccatcttgttgattctattgctctcatttgttcttccagaacct 35924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 44032 - 43844
Alignment:
Q  12 gcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttcaa-gaacaagcatccaatgccttcaaat 110  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||||| ||| |||| | || ||| ||||| ||||| |||||||||||||||||||    
T  44032 gcagagaca-aaacagagtagtggagatagtggttgtacaattcgtacaaatgtcctttttcaacgctcttcaaggaacaggcatccaatgccttcaaat 43934  T
Q  111 catttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtc 201  Q
    | |||  || ||| | ||| |||||||||    |||||||||||| |||| || |||||||||  ||||||||||||||||| ||||||||    
T  43933 ctttttgaattagcctttgcttcactcttctgatcttctgcaatg-ttaggcgtgattaaatcttttgaacagcctttgaagttttaagtc 43844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 379
Target Start/End: Complemental strand, 43823 - 43652
Alignment:
Q  205 catctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactttt 304  Q
    ||||||||||||||  ||  |||||||| || ||  |||||| || || |||||||||||||||||||||||||||||| ||||  ||| || |||||      
T  43823 catctcctgatgaaaaactgcttctggtgatgtt--gcttctgattaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaagagcacttga 43726  T
Q  305 gtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttcca 379  Q
      |||||| |   ||  | |||||||||||||||||||||| ||| |||||||||| ||||  ||||||||||||    
T  43725 a-cttcagaacctcttttcttcagatgcttcaagcttccttcttgctgattccattgctctaatttgttcttcca 43652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 251
Target Start/End: Complemental strand, 5922 - 5813
Alignment:
Q  143 gtcttctgcaatgcttagacgagattaaatccattgaacagccttt-gaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcag 241  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||| ||||||||||||| | |||||||| ||||||| || |||||||| ||||| ||    
T  5922 gtcttctgcaatgcttaaacgagatgaaatccattgaacatccttttgaagctttaagtcttgcatctcctaatgaacttcagcttctggtgatctttag 5823  T
Q  242 cttcttatga 251  Q
    ||||| ||||    
T  5822 cttctgatga 5813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 5756 - 5695
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||    
T  5756 ttcagatgcttcaaacttcctttttgttgattccttagctctcttttgttcttccagaacct 5695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 195
Target Start/End: Complemental strand, 1619 - 1452
Alignment:
Q  28 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcg 126  Q
    |||||||||||||||||||||||||||||||||||||| ||||   || | | ||| ||||| || | ||||||||||||||||| |||  |||||||||    
T  1619 agtagtggagatagtggttgtacacttcgtacaattgtccttttccaacgttcttcaaagaataaacgtccaatgccttcaaatccttttgaaatagtcg 1520  T
Q  127 ttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctt 195  Q
    ||| ||||||| |  ||||||||||||||  | | || |||||||||  ||||||| ||||||||||||    
T  1519 ttgcttcactcctatagtcttctgcaatg-atgggcgtgattaaatcatttgaacaacctttgaagctt 1452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 1307 - 1246
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||||||||| |||||||||   || ||||| ||||||||||||||||||    
T  1307 ttcagatgcttcaagcttccttcttgttgattatgttgctctcatttgttcttccagaacct 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 280
Target Start/End: Original strand, 5634 - 5895
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa-tcatttcaaa 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||   || | | | | ||||| |||||||||||||||||||| ||||||  ||    
T  5634 aaactgagtagtggaggtagtggttgtacacttcgtacaattgta-ttttccaacgttctccaaagaataagcatccaatgccttcaaattcattt-gaa 5731  T
Q  120 atagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaac 219  Q
    |||||||||| |||| ||||  ||||||||| ||||  ||| |  ||||||| |  |||||||||||||||||||| || || | || || ||||||| |    
T  5732 atagtcgttgcttcattcttctagtcttctggaatg-ataggcatgattaaaacatttgaacagcctttgaagcttcaattctttcagcttctgatgatc 5830  T
Q  220 tacaacttctggttatcttc--agcttcttatgagat--gcttctgatgaacttgcttctgatga 280  Q
    | ||||| ||| | ||||||  ||||||| ||||  |  ||||||| ||||||||||||||||||    
T  5831 ttcaactcctgatgatcttcagagcttctgatgatgtcagcttctggtgaacttgcttctgatga 5895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 383
Target Start/End: Original strand, 8132 - 8195
Alignment:
Q  324 ttcagatgcttcaagcttcctttttgt----tgattccattactctcttttgttcttccagaac 383  Q
    |||||||||||||||||| ||| ||||    |||||||||| ||||| ||||||||||||||||    
T  8132 ttcagatgcttcaagcttacttcttgtacgttgattccattgctctcatttgttcttccagaac 8195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 385
Target Start/End: Original strand, 40638 - 41014
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatt 114  Q
    ||||| |||| |||||||| || ||||||||||||||||| ||||||||| |||| | || ||| ||| |||||| | ||||  ||||||||||||  ||    
T  40638 agacataaacagagtagtgaaggtagtggttgtacacttcttacaattgttctttttcaacgctcttcaaagaaccaccatcatatgccttcaaattctt 40737  T
Q  115 tcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctga 214  Q
    |  || ||| ||||| |||||||||   |||||||||||||| |||  | |||||||||  |||||||||||||||||||| || ||   ||||| ||||    
T  40738 ttgaattagccgttgcttcactcttctggtcttctgcaatgc-taggtgtgattaaatcttttgaacagcctttgaagcttcaattctctcatcttctga 40836  T
Q  215 tgaact-----------acaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 303  Q
    ||| ||           ||  |||||||| || ||  |||||| ||||| |||||||||||| ||| ||||||||||| | | ||  |||||| | |  |    
T  40837 tgatcttcagatggaaaactgcttctggtgatgtt--gcttctaatgaggtgcttctgatgatcttacttctgatgacatcaccacttcaggagccc--t 40932  T
Q  304 tgtcttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||  ||||| |  |||  | |||||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  40933 tgagttcagaaccacttttcttcagatggttcaaacttcctttttgttgattccattgctctcatttgttcttccagaacct 41014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 211 - 356
Target Start/End: Complemental strand, 13447 - 13304
Alignment:
Q  211 ctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttc 310  Q
    |||||||||| || ||||||||  |||||||||||| |||||||||||||||||||| ||||| | ||||| | ||||  |||||| |||  |    |||    
T  13447 ctgatgaacttcagcttctggtgttcttcagcttctgatgagatgcttctgatgaacatgcttttaatgacatcatcacttcaggagcac--taaatttc 13350  T
Q  311 aggagaactgctattcagatgcttcaagcttcctttttgttgattc 356  Q
    ||||| ||| || ||||||||||||||||||| |||||||||||||    
T  13349 aggagcacttctcttcagatgcttcaagcttcttttttgttgattc 13304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 281
Target Start/End: Complemental strand, 9338 - 9252
Alignment:
Q  193 ctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatgaacttgcttctgatgac 281  Q
    ||||||||| | |||||||||||||||| || |||||||| |||||  |||||| |||||||||||||||||||||| |||||||||||    
T  9338 ctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatgagatgcttctgatgaactttcttctgatgac 9252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 9195 - 9118
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||  ||| || |||||| ||||||||||||||||| ||||||||  || ||||||||||||||||||||||||    
T  9195 cttcaggatcacttctcttcagacgcttcaagcttcctttt-gttgattcatttgctctcttttgttcttccagaacct 9118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 9262 - 9214
Alignment:
Q  256 cttctgatgaacttgcttctgatgacgttatcagctcaggatcactttt 304  Q
    |||||||||| ||||||||||||||||| ||||  |||||| |||||||    
T  9262 cttctgatgaccttgcttctgatgacgtcatcacttcaggagcactttt 9214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 232
Target Start/End: Original strand, 7963 - 8147
Alignment:
Q  46 tgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagt 144  Q
    ||||||||||||||||  ||||| ||| || ||| ||  ||||| ||||||| |||||  |  |||| ||||||||||||||||| |  ||| || ||||    
T  7963 tgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcgaatgcaattcaatcctttcaaaatagtcgttgctatacttttccagt 8062  T
Q  145 cttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggt 232  Q
    |||||||||| |||||||||| || ||||| |  |||||| |||||||||||||||  ||||||| |||||||||| || ||||||||    
T  8063 cttctgcaat-cttagacgagtttgaatccttgaaacagcttttgaagctttaagt--tacatcttctgatgaactgcagcttctggt 8147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 1 - 84
Alignment:
Q  146 ttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggt 232  Q
    ||||||||| |||||||||| || ||||| |  |||||| |||||||||||||||  ||||||| |||||||||| || ||||||||    
T  1 ttctgcaat-cttagacgagtttgaatccttgaaacagcttttgaagctttaagt--tacatcttctgatgaactgcagcttctggt 84  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 379
Target Start/End: Original strand, 35442 - 35569
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgcta---ttcagatgcttcaagcttc-ctttttgt 350  Q
    ||||||||||||||||||||||||||||| ||||  ||||   |||||| ||||||||||| ||| | |   ||||||||||| | ||||| ||||||||    
T  35442 gcttctgatgaacttgcttctgatgacgtcatcacttcagaggcacttt-gtcttcaggagcacttcaaaacttcagatgctttaggcttctctttttgt 35540  T
Q  351 tgattccattactctcttttgttcttcca 379  Q
    ||||||| || ||||||||||||||||||    
T  35541 tgattcctttgctctcttttgttcttcca 35569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 74577 - 74678
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttcaaa 109  Q
    |||||||| ||||||  |||||| ||| ||||||||||||||||| |||||||||||||||| || ||| ||| |||| |||||||| ||| ||||||||    
T  74577 agcagagatacaaacaaagtagtagaggtagtggttgtacacttcatacaattgtactttgtcaatgcttttcaaagagcaagcatctaattccttcaaa 74676  T
Q  110 tc 111  Q
    ||    
T  74677 tc 74678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 74855 - 74933
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    ||||||||| |||  | |||||||||||||| ||| ||| |||||||||||| | ||||| ||||||||||||||||||    
T  74855 cttcaggagcacttttcttcagatgcttcaacctttcttcttgttgattccactgctctcgtttgttcttccagaacct 74933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 280
Target Start/End: Original strand, 74718 - 74831
Alignment:
Q  165 gattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatg 264  Q
    |||||||||| ||||||| ||||||||||||||| ||  ||| || |||||||  | || |||||||| || ||  | |||| ||||| ||||| |||||    
T  74718 gattaaatcctttgaacaacctttgaagctttaattctcacagcttctgatgatgttcagcttctggtgatgtt--gtttctgatgaggtgcttatgatg 74815  T
Q  265 aacttgcttctgatga 280  Q
    ||||||||| ||||||    
T  74816 aacttgcttatgatga 74831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 46; Significance: 4e-17; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 84 - 232
Target Start/End: Complemental strand, 65469 - 65324
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    ||||| |||||||||||||| |  |||| ||||||||||||||||  |  ||| || |||||||||||||| |||||||||| || ||||| |  || ||    
T  65469 aagaataagcatccaatgccctttaatcctttcaaaatagtcgtttctatacttttccagtcttctgcaat-cttagacgagtttgaatccttgaaatag 65371  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggt 232  Q
    | |||||||||||||||  | |||||||||||||||| || ||||||||    
T  65370 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggt 65324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 84 - 232
Target Start/End: Complemental strand, 144514 - 144369
Alignment:
Q  84 aagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 183  Q
    ||||| |||||||||||||| |  |||| |||||||| |||||||| |  ||| || |||||||||||||| |||||||||| || ||||| |  || ||    
T  144514 aagaataagcatccaatgccctttaatcctttcaaaacagtcgttgctatacttttccagtcttctgcaat-cttagacgagtttgaatccttgaaatag 144416  T
Q  184 cctttgaagctttaagtcctacatctcctgatgaactacaacttctggt 232  Q
    | |||||||||||||||  | |||||||||||||||| || ||||||||    
T  144415 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggt 144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 165056 - 164942
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatcatt 114  Q
    ||||| |||| ||||||||||| ||||||| ||||||||||||||   ||||||||| || |||  || ||| | |||||||||||||||||||||| ||    
T  165056 agacataaacagagtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctt 164957  T
Q  115 tcaaaatagtcgttg 129  Q
    ||||| |||| ||||    
T  164956 tcaaattagttgttg 164942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 289
Target Start/End: Complemental strand, 164799 - 164767
Alignment:
Q  257 ttctgatgaacttgcttctgatgacgttatcag 289  Q
    ||||||||||||||||||||||||||| |||||    
T  164799 ttctgatgaacttgcttctgatgacgtcatcag 164767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 2090 - 2027
Alignment:
Q  31 agtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagc 93  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||| ||| ||||||||||    
T  2090 agtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagc 2027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 44; Significance: 6e-16; HSPs: 4)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 25514 - 25395
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||| ||| ||  ||  || ||||| ||  |||||||||| |  ||    
T  25514 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataactatccaatgcccttcaa 25415  T
Q  110 tcatttcaaaatagtcgttg 129  Q
    || |||||||||||||||||    
T  25414 tcctttcaaaatagtcgttg 25395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 354
Target Start/End: Complemental strand, 23449 - 23350
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagctt-cctttttgttga 353  Q
    ||||||||||||||||||| ||||||||||||||  |||||| ||| |||||||||||||| | |  | |||||| |||| |||||| ||||||||||||    
T  23449 gcttctgatgaacttgcttttgatgacgttatcacttcaggagcac-tttgtcttcaggagcagttttcttcagacgctttaagcttccctttttgttga 23351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 23546 - 23458
Alignment:
Q  141 cagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcctacatctcctgatgaactacaacttctggt 232  Q
    |||||||||||||| |||||||||| || ||||| |  |||||| |||||||||||||||  | |||||||||||||||| || ||||||||    
T  23546 cagtcttctgcaat-cttagacgagtttgaatccttgaaacagcttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggt 23458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 15854 - 15811
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacactt 54  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
T  15854 agcagagacaaaaacagagtagtggagatagtggttgtacactt 15811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 1324 - 1410
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttca 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| | || ||| ||| || || ||||||| ||||||||||    
T  1324 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttca 1410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 87 - 1
Alignment:
Q  22 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagctgttc-aagaacaagcatccaatgccttca 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| | || ||| ||| || || ||||||| ||||||||||    
T  87 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttca 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 2845 - 2795
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  2845 agcagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaa 2795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 17880 - 17700
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaa 109  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| |||||  ||||| ||| || |||  || ||| | ||||||||||||||          
T  17880 agcagagacaaaaacagagtagtggagatagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaaggataagcatccaatgcc------ 17787  T
Q  110 tcatttcaaaatagtcgttgtttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagt 200  Q
       ||||||||||| ||||| |  ||| ||  ||||||||||||| |||||||||| || ||||| |  |||||| |||||||||||||||    
T  17786 ---tttcaaaatagacgttgctatacttttgtagtcttctgcaat-cttagacgagtttgaatccttgaaacagcttttgaagctttaagt 17700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 17661 - 17602
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  17661 gcttctgatgaacttgcttctgatgacgtcatcacttcaggatcac-tttgtcttcaggag 17602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 15732 - 15618
Alignment:
Q  16 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgttaaagct-gttcaagaacaagcatccaatgccttcaaatcatt 114  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||||   ||||||||| || |||  || ||  | |||||||||||||||||||||| ||    
T  15732 agacataaacagagtagtggagatagtggtcgtacacttcgtacagacgtactttgtcaatgctctttgaaagataagcatccaatgccttcaaatcctt 15633  T
Q  115 tcaaaatagtcgttg 129  Q
    ||||| ||| |||||    
T  15632 tcaaactagccgttg 15618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 289
Target Start/End: Complemental strand, 15489 - 15454
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcag 289  Q
    |||||||||||||||||||||||||||||| |||||    
T  15489 tgcttctgatgaacttgcttctgatgacgtcatcag 15454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 60799 - 60729
Alignment:
Q  195 ttaagtcctacatctcctgatgaactacaacttctggttatcttcagcttcttatgagatgcttctgatga 265  Q
    ||||||| | ||||| |||||||||| || ||| |||| ||||||||||||| ||||||||||||||||||    
T  60799 ttaagtcttgcatcttctgatgaacttcagcttgtggtgatcttcagcttctaatgagatgcttctgatga 60729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 60704 - 60654
Alignment:
Q  307 cttcaggagaactgctattcagatgcttcaagcttcctttttgttgattcc 357  Q
    ||||||||| ||| || |||||| |||||||||||||||||||||||||||    
T  60704 cttcaggagcacttctcttcagacgcttcaagcttcctttttgttgattcc 60654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 2806 - 2756
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||| |||||    
T  2806 agcagagacaaaaacagagtagtggagttagtggttgtacacttcatacaa 2756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 2598 - 2551
Alignment:
Q  255 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcactt 302  Q
    ||||||||||||||||||||||||||||| ||||  |||||| |||||    
T  2598 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 2551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 6002 - 6043
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacac 52  Q
    |||||||||| |||| ||||||||||||||||||||||||||    
T  6002 agcagagacaaaaacagagtagtggagatagtggttgtacac 6043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 7377 - 7434
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtact 68  Q
    ||||| |||| |||| ||||||||||  ||||||||||||||||||||||| ||||||    
T  7377 agcagggacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaatgtact 7434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 8511 - 8567
Alignment:
Q  258 tctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    |||||||||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  8511 tctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 8567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 87715 - 87666
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtaca 60  Q
    |||||||||| |||| ||||||||||  ||||||||||||||||||||||    
T  87715 agcagagacagaaacagagtagtggaagtagtggttgtacacttcgtaca 87666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 385
Target Start/End: Complemental strand, 2438 - 2387
Alignment:
Q  334 tcaagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||| |||||||| |||| |||| ||||| ||||||||||||||||||    
T  2438 tcaagcttactttttgtagatttcattgctctcatttgttcttccagaacct 2387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 12057 - 12112
Alignment:
Q  324 ttcagatgcttcaagcttc-ctttttgttgattccattactctcttttgttcttcc 378  Q
    ||||||||||| | ||||| ||||||||||||||| || |||||||||||||||||    
T  12057 ttcagatgctttaggcttctctttttgttgattcctttcctctcttttgttcttcc 12112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 935 - 886
Alignment:
Q  11 agcagagacacaaactgagtagtggagatagtggttgtacacttcgtacaa 61  Q
    |||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  935 agcagagaca-aaacagagtagtggaagtagtggttgtacacttcgtacaa 886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 385
Target Start/End: Original strand, 19359 - 19409
Alignment:
Q  335 caagcttcctttttgttgattccattactctcttttgttcttccagaacct 385  Q
    |||||||||||||||| ||||| ||| ||||| |||||||||||| |||||    
T  19359 caagcttcctttttgtagattcaatttctctcatttgttcttccataacct 19409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 937 - 997
Alignment:
Q  254 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 315  Q
    ||||| |||||||||||||||||||||||| ||||  |||| | ||| ||||||||||||||    
T  937 tgcttatgatgaacttgcttctgatgacgtcatcacttcagaagcac-tttgtcttcaggag 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 379
Target Start/End: Complemental strand, 3653 - 3617
Alignment:
Q  343 ctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||||||||| || ||||||||||||||||||    
T  3653 ctttttgttgattcctttgctctcttttgttcttcca 3617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 7617 - 7673
Alignment:
Q  324 ttcagatgcttcaagcttc-ctttttgttgattccattactctcttttgttcttcca 379  Q
    ||||||||||| | ||||| ||||||||||||||| || ||||||||| ||||||||    
T  7617 ttcagatgctttaggcttctctttttgttgattcctttgctctctttttttcttcca 7673  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 6621 - 6589
Alignment:
Q  27 gagtagtggagatagtggttgtacacttcgtac 59  Q
    ||||||||||| |||||||||||||||||||||    
T  6621 gagtagtggaggtagtggttgtacacttcgtac 6589  T

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