View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11807_high_12 (Length: 259)

Name: NF11807_high_12
Description: NF11807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11807_high_12
NF11807_high_12
[»] chr1 (63 HSPs)
chr1 (18-248)||(2926471-2926696)
chr1 (66-248)||(22079322-22079504)
chr1 (44-229)||(9109419-9109604)
chr1 (66-245)||(47255325-47255503)
chr1 (87-248)||(6808479-6808639)
chr1 (72-220)||(47115183-47115331)
chr1 (74-222)||(20762686-20762833)
chr1 (72-205)||(13316376-13316508)
chr1 (108-229)||(37282692-37282812)
chr1 (108-241)||(50167165-50167295)
chr1 (66-211)||(13938143-13938287)
chr1 (165-245)||(28242408-28242487)
chr1 (66-205)||(31659243-31659382)
chr1 (80-205)||(4552661-4552785)
chr1 (72-205)||(11348710-11348842)
chr1 (108-205)||(19754543-19754639)
chr1 (108-205)||(28220250-28220346)
chr1 (108-245)||(31925693-31925827)
chr1 (66-205)||(37168302-37168442)
chr1 (108-245)||(42297959-42298095)
chr1 (108-241)||(49918398-49918528)
chr1 (66-205)||(834191-834330)
chr1 (66-205)||(8550811-8550950)
chr1 (66-205)||(13547113-13547252)
chr1 (66-205)||(13549024-13549163)
chr1 (66-220)||(37033081-37033236)
chr1 (64-210)||(41135824-41135968)
chr1 (108-205)||(3156913-3157009)
chr1 (158-203)||(13659362-13659407)
chr1 (108-205)||(28223445-28223541)
chr1 (108-205)||(28265578-28265674)
chr1 (66-189)||(30476486-30476609)
chr1 (165-205)||(46065022-46065062)
chr1 (66-241)||(50169200-50169373)
chr1 (108-222)||(7482238-7482351)
chr1 (158-205)||(44455257-44455304)
chr1 (185-247)||(12318506-12318568)
chr1 (108-206)||(13137999-13138096)
chr1 (66-235)||(29136252-29136421)
chr1 (66-190)||(16455627-16455750)
chr1 (202-243)||(25652225-25652266)
chr1 (108-220)||(2262983-2263095)
chr1 (158-205)||(1833619-1833666)
chr1 (158-205)||(3189427-3189474)
chr1 (158-205)||(3198244-3198291)
chr1 (158-205)||(3207083-3207130)
chr1 (71-185)||(3460706-3460821)
chr1 (108-192)||(10925271-10925357)
chr1 (108-231)||(19752734-19752855)
chr1 (25-222)||(34603541-34603737)
chr1 (158-205)||(36683777-36683824)
chr1 (158-197)||(37503589-37503628)
chr1 (158-205)||(45644378-45644425)
chr1 (66-231)||(41360919-41361083)
chr1 (109-227)||(44650165-44650282)
chr1 (108-189)||(193659-193739)
chr1 (73-241)||(196897-197063)
chr1 (158-235)||(5460003-5460080)
chr1 (165-202)||(8871089-8871126)
chr1 (110-179)||(32471510-32471579)
chr1 (80-192)||(37559905-37560017)
chr1 (165-241)||(40122186-40122260)
chr1 (158-202)||(51765494-51765538)
[»] chr5 (43 HSPs)
chr5 (75-247)||(316777-316948)
chr5 (69-210)||(3325922-3326063)
chr5 (66-205)||(25412766-25412904)
chr5 (80-246)||(10054799-10054964)
chr5 (67-247)||(10700632-10700809)
chr5 (108-235)||(28278364-28278489)
chr5 (66-235)||(16452085-16452253)
chr5 (80-242)||(33906017-33906179)
chr5 (72-241)||(30182600-30182767)
chr5 (108-205)||(37439189-37439285)
chr5 (66-205)||(213470-213609)
chr5 (66-205)||(13239756-13239895)
chr5 (66-205)||(33831685-33831824)
chr5 (74-220)||(13343075-13343219)
chr5 (165-220)||(27637622-27637677)
chr5 (108-205)||(30682946-30683044)
chr5 (66-241)||(16409480-16409656)
chr5 (66-205)||(28750679-28750818)
chr5 (74-241)||(36074032-36074196)
chr5 (66-197)||(38747010-38747141)
chr5 (66-205)||(40147266-40147405)
chr5 (165-220)||(4160703-4160758)
chr5 (67-205)||(13488209-13488347)
chr5 (108-241)||(538073-538203)
chr5 (74-242)||(14689415-14689581)
chr5 (119-235)||(30793195-30793309)
chr5 (108-205)||(32636872-32636968)
chr5 (108-205)||(42428454-42428550)
chr5 (108-203)||(9049368-9049462)
chr5 (66-192)||(39468586-39468712)
chr5 (108-205)||(533817-533913)
chr5 (158-231)||(8565945-8566017)
chr5 (158-241)||(9789211-9789295)
chr5 (165-205)||(16640964-16641004)
chr5 (66-241)||(18441635-18441811)
chr5 (165-205)||(19806467-19806507)
chr5 (158-241)||(26170859-26170943)
chr5 (158-241)||(26177979-26178063)
chr5 (109-205)||(42426259-42426354)
chr5 (158-205)||(5058142-5058189)
chr5 (155-205)||(3075682-3075732)
chr5 (108-201)||(42309963-42310055)
chr5 (81-149)||(35616190-35616258)
[»] chr4 (61 HSPs)
chr4 (82-247)||(33089900-33090065)
chr4 (30-235)||(22882746-22882949)
chr4 (30-235)||(22934410-22934613)
chr4 (119-244)||(12119598-12119722)
chr4 (66-245)||(12073397-12073575)
chr4 (80-245)||(379400-379563)
chr4 (72-205)||(56178661-56178793)
chr4 (66-205)||(27416989-27417128)
chr4 (81-242)||(34112838-34112997)
chr4 (66-191)||(40632450-40632575)
chr4 (66-218)||(46703505-46703658)
chr4 (80-205)||(8665428-8665552)
chr4 (66-205)||(9927482-9927621)
chr4 (108-220)||(26699451-26699563)
chr4 (66-235)||(37229716-37229885)
chr4 (108-245)||(2209761-2209898)
chr4 (33-235)||(6542174-6542376)
chr4 (108-245)||(50262685-50262821)
chr4 (108-245)||(50673833-50673967)
chr4 (66-202)||(52095389-52095525)
chr4 (70-197)||(37740635-37740761)
chr4 (74-205)||(48143057-48143187)
chr4 (119-205)||(26175660-26175745)
chr4 (109-207)||(33989893-33989991)
chr4 (66-203)||(34570440-34570577)
chr4 (185-247)||(38811173-38811235)
chr4 (108-205)||(41964463-41964560)
chr4 (72-192)||(4587970-4588090)
chr4 (108-205)||(12743949-12744045)
chr4 (108-205)||(12745338-12745434)
chr4 (66-205)||(12739574-12739713)
chr4 (66-205)||(26364241-26364380)
chr4 (114-205)||(5370107-5370197)
chr4 (108-203)||(5429727-5429821)
chr4 (158-241)||(13992282-13992364)
chr4 (108-235)||(21703830-21703956)
chr4 (158-205)||(29999830-29999877)
chr4 (119-210)||(37754979-37755070)
chr4 (158-205)||(47038435-47038482)
chr4 (68-205)||(5207866-5208003)
chr4 (66-187)||(24969117-24969238)
chr4 (108-242)||(36463378-36463509)
chr4 (108-205)||(6656004-6656100)
chr4 (108-189)||(12744087-12744167)
chr4 (108-205)||(48893662-48893758)
chr4 (108-245)||(54883068-54883203)
chr4 (66-205)||(5871825-5871964)
chr4 (109-205)||(8648188-8648283)
chr4 (66-205)||(35662446-35662585)
chr4 (108-192)||(36994572-36994655)
chr4 (165-205)||(41639530-41639570)
chr4 (66-237)||(44967821-44967992)
chr4 (66-192)||(12747793-12747919)
chr4 (158-192)||(3913545-3913579)
chr4 (119-189)||(12745476-12745545)
chr4 (80-190)||(29254514-29254623)
chr4 (75-149)||(34788854-34788928)
chr4 (119-205)||(51337123-51337208)
chr4 (80-205)||(52467378-52467502)
chr4 (75-188)||(6677482-6677597)
chr4 (73-149)||(44570445-44570521)
[»] chr2 (37 HSPs)
chr2 (43-229)||(30218044-30218230)
chr2 (108-245)||(24398105-24398242)
chr2 (25-229)||(33648135-33648340)
chr2 (66-205)||(45726934-45727073)
chr2 (66-205)||(36318033-36318172)
chr2 (74-205)||(6595030-6595160)
chr2 (108-227)||(28671978-28672097)
chr2 (66-191)||(5723294-5723418)
chr2 (66-205)||(723768-723907)
chr2 (74-205)||(4503157-4503286)
chr2 (158-245)||(17450675-17450759)
chr2 (75-205)||(30833360-30833490)
chr2 (66-205)||(1631756-1631895)
chr2 (66-205)||(17057393-17057532)
chr2 (66-205)||(17085376-17085515)
chr2 (66-205)||(35446908-35447047)
chr2 (66-205)||(42362357-42362496)
chr2 (74-205)||(45099769-45099898)
chr2 (75-205)||(4484354-4484484)
chr2 (119-205)||(36988100-36988185)
chr2 (108-205)||(2334442-2334538)
chr2 (66-241)||(11690506-11690679)
chr2 (66-205)||(29867874-29868013)
chr2 (66-235)||(42019864-42020035)
chr2 (108-235)||(17490143-17490268)
chr2 (158-205)||(34139794-34139841)
chr2 (158-205)||(39284933-39284980)
chr2 (72-205)||(36205689-36205820)
chr2 (69-205)||(11067313-11067449)
chr2 (80-205)||(11151615-11151739)
chr2 (108-241)||(33162440-33162570)
chr2 (160-205)||(42412117-42412161)
chr2 (165-205)||(14633849-14633889)
chr2 (66-197)||(38312245-38312376)
chr2 (158-205)||(26353281-26353328)
chr2 (108-197)||(36773610-36773698)
chr2 (108-205)||(42288135-42288230)
[»] chr8 (43 HSPs)
chr8 (66-205)||(34256531-34256669)
chr8 (93-227)||(7597647-7597781)
chr8 (66-205)||(34254355-34254493)
chr8 (74-205)||(17982667-17982797)
chr8 (110-211)||(32902191-32902292)
chr8 (66-205)||(42435015-42435154)
chr8 (108-211)||(11712018-11712121)
chr8 (74-205)||(31218271-31218401)
chr8 (74-205)||(42498208-42498338)
chr8 (33-197)||(5689244-5689407)
chr8 (93-229)||(29796320-29796457)
chr8 (108-205)||(40321128-40321224)
chr8 (74-205)||(1746243-1746372)
chr8 (66-205)||(15212791-15212930)
chr8 (67-197)||(30143346-30143476)
chr8 (66-203)||(40328784-40328922)
chr8 (159-245)||(10930184-10930269)
chr8 (119-205)||(33352209-33352294)
chr8 (66-245)||(11137031-11137209)
chr8 (66-241)||(3303660-3303833)
chr8 (185-245)||(9633592-9633652)
chr8 (66-205)||(27811283-27811422)
chr8 (66-205)||(40221750-40221889)
chr8 (158-205)||(4743238-4743285)
chr8 (74-205)||(12702658-12702788)
chr8 (119-205)||(1345395-1345480)
chr8 (155-205)||(4733800-4733850)
chr8 (108-205)||(4283572-4283668)
chr8 (108-205)||(18655448-18655544)
chr8 (108-205)||(44303903-44303999)
chr8 (158-205)||(2627833-2627880)
chr8 (158-205)||(8153855-8153902)
chr8 (155-205)||(3772286-3772336)
chr8 (119-197)||(4731717-4731794)
chr8 (66-231)||(19491698-19491862)
chr8 (108-205)||(19945383-19945480)
chr8 (120-205)||(3073898-3073981)
chr8 (80-205)||(4162517-4162640)
chr8 (108-205)||(18141868-18141964)
chr8 (155-192)||(30291701-30291738)
chr8 (165-240)||(3439607-3439683)
chr8 (66-205)||(8965715-8965854)
chr8 (108-192)||(41366651-41366734)
[»] chr3 (53 HSPs)
chr3 (74-245)||(46173371-46173540)
chr3 (43-247)||(20937639-20937842)
chr3 (66-245)||(30236130-30236308)
chr3 (80-245)||(46860494-46860657)
chr3 (66-205)||(45095169-45095307)
chr3 (121-220)||(55301981-55302079)
chr3 (25-235)||(35138700-35138909)
chr3 (66-220)||(4055773-4055926)
chr3 (66-220)||(29813068-29813221)
chr3 (47-247)||(26323053-26323255)
chr3 (33-205)||(7762238-7762409)
chr3 (72-205)||(23200162-23200294)
chr3 (72-205)||(37408470-37408602)
chr3 (108-205)||(40735431-40735527)
chr3 (66-205)||(19683913-19684052)
chr3 (81-205)||(29810889-29811012)
chr3 (115-205)||(6095623-6095712)
chr3 (75-205)||(7764479-7764608)
chr3 (72-205)||(23197963-23198095)
chr3 (108-205)||(54593752-54593848)
chr3 (66-205)||(760852-760991)
chr3 (66-205)||(34491217-34491356)
chr3 (108-220)||(4075480-4075592)
chr3 (74-205)||(5258168-5258298)
chr3 (66-191)||(22835040-22835165)
chr3 (158-220)||(43403753-43403815)
chr3 (108-245)||(49199453-49199590)
chr3 (66-235)||(53921498-53921666)
chr3 (80-205)||(9581302-9581426)
chr3 (158-203)||(16499126-16499171)
chr3 (66-245)||(43401785-43401965)
chr3 (108-205)||(44331593-44331689)
chr3 (33-205)||(51398787-51398958)
chr3 (74-189)||(5260363-5260477)
chr3 (108-235)||(32891152-32891277)
chr3 (165-220)||(41819532-41819587)
chr3 (109-192)||(44700515-44700597)
chr3 (108-205)||(29196410-29196506)
chr3 (165-205)||(40913397-40913437)
chr3 (167-210)||(5433901-5433944)
chr3 (158-205)||(7780028-7780075)
chr3 (66-192)||(29682364-29682490)
chr3 (158-205)||(39153385-39153432)
chr3 (158-205)||(40734595-40734642)
chr3 (158-205)||(47304348-47304395)
chr3 (119-205)||(9636150-9636235)
chr3 (160-205)||(2075099-2075144)
chr3 (158-203)||(4570049-4570094)
chr3 (158-211)||(33191928-33191980)
chr3 (66-205)||(5236481-5236619)
chr3 (81-149)||(8166536-8166604)
chr3 (165-205)||(27305734-27305774)
chr3 (105-205)||(31314490-31314589)
[»] scaffold0219 (1 HSPs)
scaffold0219 (94-229)||(27442-27577)
[»] chr6 (30 HSPs)
chr6 (66-205)||(5406224-5406362)
chr6 (66-205)||(5410549-5410687)
chr6 (43-190)||(25073551-25073698)
chr6 (66-202)||(31404702-31404837)
chr6 (66-205)||(5413418-5413556)
chr6 (165-245)||(26800691-26800770)
chr6 (33-203)||(4045396-4045566)
chr6 (66-245)||(22424811-22424990)
chr6 (66-205)||(2972963-2973102)
chr6 (81-245)||(5043648-5043810)
chr6 (66-205)||(21588936-21589075)
chr6 (66-205)||(21593669-21593808)
chr6 (66-205)||(26830147-26830286)
chr6 (66-231)||(3808706-3808872)
chr6 (74-205)||(30834560-30834690)
chr6 (72-205)||(2171556-2171687)
chr6 (108-205)||(28137432-28137528)
chr6 (158-240)||(26954277-26954357)
chr6 (74-200)||(33160381-33160506)
chr6 (66-245)||(17758028-17758206)
chr6 (158-205)||(5409093-5409140)
chr6 (74-205)||(16452353-16452483)
chr6 (109-191)||(9183069-9183150)
chr6 (168-205)||(33211209-33211246)
chr6 (158-241)||(6097438-6097522)
chr6 (158-205)||(16569119-16569166)
chr6 (158-245)||(17763087-17763173)
chr6 (108-205)||(603112-603208)
chr6 (158-241)||(412199-412283)
chr6 (165-205)||(3038927-3038967)
[»] chr7 (54 HSPs)
chr7 (69-235)||(4253523-4253689)
chr7 (43-192)||(5116587-5116736)
chr7 (108-245)||(22328375-22328511)
chr7 (66-205)||(48491584-48491723)
chr7 (66-220)||(3904626-3904780)
chr7 (158-245)||(8359301-8359387)
chr7 (72-205)||(35853926-35854058)
chr7 (66-241)||(48489436-48489609)
chr7 (74-205)||(23555054-23555184)
chr7 (108-205)||(3259043-3259139)
chr7 (72-205)||(14069857-14069989)
chr7 (72-205)||(14379885-14380017)
chr7 (108-205)||(29991101-29991197)
chr7 (108-205)||(32358078-32358174)
chr7 (66-205)||(18126649-18126788)
chr7 (66-205)||(22269978-22270117)
chr7 (66-205)||(27347822-27347961)
chr7 (67-205)||(6431977-6432115)
chr7 (43-235)||(26639303-26639499)
chr7 (108-231)||(30024731-30024852)
chr7 (158-245)||(34310701-34310787)
chr7 (108-205)||(19502226-19502322)
chr7 (72-205)||(41317458-41317590)
chr7 (109-205)||(8153391-8153486)
chr7 (66-205)||(41649035-41649173)
chr7 (66-205)||(43864249-43864388)
chr7 (108-192)||(47673980-47674063)
chr7 (66-192)||(4586166-4586292)
chr7 (66-192)||(26417321-26417447)
chr7 (66-205)||(39731374-39731513)
chr7 (108-222)||(2390330-2390442)
chr7 (155-229)||(18396412-18396486)
chr7 (119-205)||(23565085-23565170)
chr7 (66-235)||(31105388-31105556)
chr7 (166-235)||(31519007-31519076)
chr7 (164-241)||(12097857-12097932)
chr7 (66-205)||(25766984-25767124)
chr7 (66-205)||(2360996-2361135)
chr7 (66-205)||(29608742-29608881)
chr7 (153-205)||(30814528-30814580)
chr7 (109-241)||(47676126-47676255)
chr7 (158-205)||(496007-496054)
chr7 (158-205)||(24525526-24525573)
chr7 (158-205)||(25615950-25615997)
chr7 (158-241)||(36146398-36146479)
chr7 (75-146)||(43363556-43363627)
chr7 (72-205)||(4178786-4178917)
chr7 (66-203)||(4508732-4508869)
chr7 (119-205)||(31732993-31733078)
chr7 (33-186)||(36574558-36574710)
chr7 (108-205)||(1113705-1113801)
chr7 (43-149)||(1360230-1360338)
chr7 (108-189)||(6359992-6360072)
chr7 (158-191)||(48599372-48599405)
[»] scaffold0002 (1 HSPs)
scaffold0002 (72-205)||(434545-434677)
[»] scaffold1519 (1 HSPs)
scaffold1519 (74-205)||(930-1059)
[»] scaffold0236 (1 HSPs)
scaffold0236 (119-245)||(10548-10671)
[»] scaffold0286 (1 HSPs)
scaffold0286 (72-205)||(11569-11701)
[»] scaffold0016 (1 HSPs)
scaffold0016 (108-203)||(114650-114744)
[»] scaffold0006 (1 HSPs)
scaffold0006 (158-203)||(149123-149168)
[»] scaffold0466 (1 HSPs)
scaffold0466 (66-191)||(7332-7457)
[»] scaffold0176 (1 HSPs)
scaffold0176 (108-205)||(18028-18123)
[»] scaffold0066 (1 HSPs)
scaffold0066 (108-205)||(20439-20535)
[»] scaffold0053 (1 HSPs)
scaffold0053 (75-182)||(25068-25175)
[»] scaffold0491 (2 HSPs)
scaffold0491 (119-205)||(8759-8845)
scaffold0491 (119-205)||(11185-11271)
[»] scaffold0674 (1 HSPs)
scaffold0674 (165-205)||(3750-3790)


Alignment Details
Target: chr1 (Bit Score: 171; Significance: 6e-92; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 2926471 - 2926696
Alignment:
Q  18 gaaaacacttgggaaagtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaag 117  Q
    |||||||||||||||| |||||| |||||||||||||||||||||     |||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  2926471 gaaaacacttgggaaattgaaaattattgagtgtcttatttatgg-----gattggaaaaatggtagaaattaggtttgtgcttgaagaacttgttaaag 2926565  T
Q  118 ttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccga 217  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||    
T  2926566 ttaatttattgtaacctttttgcatctctttgaaacgaattcattggtagtggattggagagatcaatctcttctgcagagtaggtcattgttgcaccga 2926665  T
Q  218 actagataaacaattctttggtgttgttctt 248  Q
    ||||| |||||||||||||||||||||||||    
T  2926666 actaggtaaacaattctttggtgttgttctt 2926696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 248
Target Start/End: Original strand, 22079322 - 22079504
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    |||||||||||||||||||||||||  ||||| |||   || |||||||||| |||||| |||||||| ||||| ||||||||| ||  || |||||| |    
T  22079322 gagattggaaaaatggtagaaattatgtttgttctttgtgagcttgttaaagctaatttcttgtaaccattttgtatctctttgtaaagaactcattgat 22079421  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgttctt 248  Q
    | |||||||||||||||||| |||||  || |||||||||||| || ||| |||| | |||||| ||||||||||||||||||    
T  22079422 attggattggagagatcaatttctcctccaaagtaggtcattgctggaccaaacttggtaaacatttctttggtgttgttctt 22079504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 44 - 229
Target Start/End: Complemental strand, 9109604 - 9109419
Alignment:
Q  44 ttgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatc 143  Q
    ||||||||||| || |||| |||||||||  ||||||| ||||||||  ||| | |||| ||| |||||| |||||||||| |||||||| ||||| |||    
T  9109604 ttgagtgtcttgttcatggtaggagattgagaaaatggaagaaattaagtttttacttggagaacttgttgaagttaatttcttgtaacccttttgtatc 9109505  T
Q  144 tctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaaca 229  Q
    |||||| ||  ||  | ||| ||||| ||||||||||||||||||| ||| |||||| ||||| |||| ||| |||||| ||||||    
T  9109504 tctttgtaaagaacacgttgatagtgtattggagagatcaatctcttccatagagtaagtcatcgttgaaccaaactaggtaaaca 9109419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 245
Target Start/End: Complemental strand, 47255503 - 47255325
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  47255503 gagattggaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 47255405  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| |||||||| | | |||| ||| |||||||||||    
T  47255404 tagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttc-ttggtgttgtt 47255325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 248
Target Start/End: Original strand, 6808479 - 6808639
Alignment:
Q  87 attagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatc 186  Q
    ||||| ||||| |||| ||| |||||| ||| ||| || |||||||  ||||| ||||||||| ||  || |||||  ||||||||||||||||||||||    
T  6808479 attaggtttgttcttggagagcttgttgaagctaacttcttgtaactcttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatc 6808578  T
Q  187 tctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgttctt 248  Q
    ||| || |||||||||| |||||||  |||||||||||||| | ||| |||| |||||||||    
T  6808579 tcttcctcagagtaggttattgttggtccgaactagataaatatttc-ttggagttgttctt 6808639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 47115183 - 47115331
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtgg 170  Q
    |||||| |||||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  ||||| ||||||||| || |||  ||||| ||||||    
T  47115183 ggaaaattggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaa-aaacccattgatagtgg 47115281  T
Q  171 attggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 220  Q
    ||||||||||||||||||| |  |||||||||||||||||| ||||||||    
T  47115282 attggagagatcaatctctgctccagagtaggtcattgttggaccgaact 47115331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 222
Target Start/End: Original strand, 20762686 - 20762833
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||| | || || | ||||| |||||||||    
T  20762686 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttcgtaagaact-cattgatagtggatt 20762784  T
Q  174 ggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 222  Q
    |||||||||||||||||| |||||||||||||   ||| ||||||||||    
T  20762785 ggagagatcaatctctcctacagagtaggtcaagtttggaccgaactag 20762833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 13316508 - 13316376
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||    
T  13316508 ggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttggaagaact-cattgatagtgga 13316410  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||| |||||||||||  ||||||||||||    
T  13316409 ttggagagttcaatctctcctccagagtaggtca 13316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 229
Target Start/End: Complemental strand, 37282812 - 37282692
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||||| |||||| ||||||||||||||| ||  || ||||| |||||||||||||||||| |||||||||    |||||||||| |    
T  37282812 cttgttgaagctaatttatggtaacccttttgcatctctttgtaaagaactcattagtagtggattggagagataaatctctcctttggagtaggtcaat 37282713  T
Q  208 gttgtaccgaactagataaaca 229  Q
     ||| || ||||||||||||||    
T  37282712 -ttggactgaactagataaaca 37282692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 50167295 - 50167165
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    ||||| |||| |||||| ||||||||  |||| ||||||||| || ||| |||||| |||||||||||||||||||||||||||| |||| ||| |||      
T  50167295 cttgtcaaagctaatttcttgtaacccatttgtatctctttgtaa-aaactcattgatagtggattggagagatcaatctctcccccagattagctca-a 50167198  T
Q  208 gttgtaccgaactagataaacaattctttggtgt 241  Q
    |||| |||||||||| | ||||| ||||||||||    
T  50167197 gttggaccgaactaggtcaacaa-tctttggtgt 50167165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 211
Target Start/End: Original strand, 13938143 - 13938287
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaaccttttt-gcatctctttgaaacaaattcattgg 164  Q
    |||||||| |||  |||||||||||| || || |||| ||| ||||| |||  |||||| ||||||||||||| | ||||||||| || ||| ||||||     
T  13938143 gagattgggaaatgggtagaaattaggtt-gttcttggagaacttgtaaaatataatttcttgtaaccttttttgtatctctttgtaagaaactcattga 13938241  T
Q  165 tagtggattggagagatcaatctctcccacaga-gtaggtcattgttg 211  Q
    ||||||||||||||||||  |||||||| |||| ||||||||||||||    
T  13938242 tagtggattggagagatc--tctctcccccagatgtaggtcattgttg 13938287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 28242408 - 28242487
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| |||||||| | | |||| ||| |||||||||||    
T  28242408 tagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttc-ttggtgttgtt 28242487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 31659243 - 31659382
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| ||||||||||   ||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || || ||||     
T  31659243 gagattggaaaaatgggtagaaattagggctgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaactt-attga 31659341  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  31659342 tagtggattggagagatcaatctctccctcagattaggtca 31659382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 205
Target Start/End: Complemental strand, 4552785 - 4552661
Alignment:
Q  80 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 179  Q
    |||||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | ||||| || ||||||||||||    
T  4552785 ggtagaaattaggtttgtcctttgtgagcttgttgaagctaatttcttgtaacccctttgtatccctttgtaagaact-cattgataatggattggagag 4552687  T
Q  180 atcaatctctcccacagagtaggtca 205  Q
    ||||||||||||| ||||||||||||    
T  4552686 atcaatctctccctcagagtaggtca 4552661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 11348710 - 11348842
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    |||||| |||||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||  || || | ||||| |||||||    
T  11348710 ggaaaattggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttctaagaact-cattgatagtgga 11348808  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||  ||||||||||||    
T  11348809 ttggagagatcaatctctcctccagagtaggtca 11348842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 19754543 - 19754639
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  19754543 cttgttgaagctaatttcttgtaaccgatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctccctcagattaggtca 19754639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 28220346 - 28220250
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  28220346 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccagattaggtca 28220250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 31925827 - 31925693
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||   |||||||||||      
T  31925827 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctctagagtaggtca-a 31925730  T
Q  208 gttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||| |||||||||| | |||| ||| |||||||||||    
T  31925729 gttggaccgaactaggtgaacatttc-ttggtgttgtt 31925693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 37168302 - 37168442
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattg 163  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  ||||| ||||||||| || || | |||||    
T  37168302 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaagaact-cattg 37168400  T
Q  164 gtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
     |||||||||||||||||||||||||||  ||||||||||||    
T  37168401 atagtggattggagagatcaatctctcctccagagtaggtca 37168442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 42298095 - 42297959
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||| |||||||||| ||||||||||||||||  |||||||||||||     
T  42298095 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattgatagtggattgaagagatcaatctctcctccagagtaggtcatg 42297997  T
Q  208 gttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||| |||||||| | | ||||||   |||||||||||    
T  42297996 gttggaccgaactgggtgaacaatctcttggtgttgtt 42297959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 49918398 - 49918528
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||      
T  49918398 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccaaattaggtca-a 49918495  T
Q  208 gttgtaccgaactagataaacaattctttggtgt 241  Q
    |||| |||||||||| | ||||| ||||||||||    
T  49918496 gttggaccgaactaggtcaacaa-tctttggtgt 49918528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 834330 - 834191
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | |||||     
T  834330 gagattgggaaaatggatagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaagaact-cattga 834232  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  834231 tagtggattggagagatctatctctcccccagagtaggtca 834191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 8550950 - 8550811
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||| |||||| |||||||   |||| ||| ||||| || || | |||||     
T  8550950 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatccctttgtaagaact-cattga 8550852  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  8550851 tagtggattggagagatcaatctctcctccagagtaggtca 8550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 13547252 - 13547113
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| || ||| ||||||||  |||| ||||||||| || || | |||||     
T  13547252 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctattttcttgtaacccatttgtatctctttgtaagaact-cattga 13547154  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  13547153 tagtggattggagagatcaatctctcctccagagtaggtca 13547113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 13549163 - 13549024
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||||||  ||||||  |||||||  |||| ||||||||| || || | |||||     
T  13549163 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttaaacctaatttcatgtaacccatttgtatctctttgtaagaact-cattga 13549065  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  13549064 tagtggattggagagatcaatctctcctccagagtaggtca 13549024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 220
Target Start/End: Complemental strand, 37033236 - 37033081
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaa-cctttttgcatctctttgaaacaaattcattg 163  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| |||||| || ||||||||||||||| || || | |||||    
T  37033236 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaatccattttgcatctctttgtaagaact-cattg 37033138  T
Q  164 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 220  Q
     ||||||||||||||||| ||||||| |  || |||||||||| |||| ||||||||    
T  37033137 atagtggattggagagattaatctcttctccatagtaggtcatggttggaccgaact 37033081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 41135824 - 41135968
Alignment:
Q  64 aggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattg 163  Q
    |||||| | |||||| |||||||||||||||||| |||||||| ||| || |||||||||| |||||| | ||||| |||| |||| ||  || || |||    
T  41135824 aggagaatagaaaaagggtagaaattagatttgttcttgaagaactttttgaagttaatttcttgtaaaccttttgtatctatttgtaaagaactcgttg 41135923  T
Q  164 gtagtggattggagagatcaatctctcccacagagtaggtcattgtt 210  Q
     || || |   ||||||||  |||||||| |||||||||||||||||    
T  41135924 atactgaagcagagagatc--tctctccctcagagtaggtcattgtt 41135968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 3156913 - 3157009
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||    
T  3156913 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccatattaggtca 3157009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 13659407 - 13659362
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggt 203  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||    
T  13659407 tcattgatagtggattggagagatcaatctctcccccagagtaggt 13659362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 28223541 - 28223445
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||    
T  28223541 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccatattaggtca 28223445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 28265674 - 28265578
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | ||| |||||||||||||||||||||||||||| |||| |||||||    
T  28265674 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-ctttgatagtggattggagagatcaatctctcccccagattaggtca 28265578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 30476609 - 30476486
Alignment:
Q  66 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||| ||||||||||||  |||| ||| | || |||||| ||| |||||||||||||||  |||| ||||||||| ||  || ||||||     
T  30476609 gagattgggaaaataggtagaaattagggttgttctttatgaacttgttgaagataatttattgtaacccatttgtatctctttgtaa-gaactcattga 30476511  T
Q  165 tagtggattggagagatcaatctct 189  Q
    || ||||||||| ||||||||||||    
T  30476510 tactggattggacagatcaatctct 30476486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 46065022 - 46065062
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  46065022 tagtggattggagagatcaatctctcccccagagtaggtca 46065062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 50169373 - 50169200
Alignment:
Q  66 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||   |||| ||||||||| ||   | ||||||     
T  50169373 gagattggaaaaatgggtagaaattagggttgttctttgtgagcttgtcaaagctaatttcttgtaactcatttgtatctctttgtaa-gtactcattga 50169275  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgt 241  Q
    |||||||||| |||||||||||||||||  ||| |||||||  |||| |||||||| ||| ||||| ||||||||||    
T  50169274 tagtggattgaagagatcaatctctcccctagattaggtca-agttggaccgaactggatcaacaa-tctttggtgt 50169200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 7482351 - 7482238
Alignment:
Q  108 cttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcat 206  Q
    |||||| ||| |||||| ||||||||  ||||| ||||||||| || || | ||||| ||||| |||||||||||||||||||||  ||||||||||||     
T  7482351 cttgtttaagctaatttcttgtaacccattttgtatctctttgtaagaact-cattgatagtgaattggagagatcaatctctccttcagagtaggtca- 7482254  T
Q  207 tgttgtaccgaactag 222  Q
     |||| ||||||||||    
T  7482253 agttggaccgaactag 7482238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 44455257 - 44455304
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||||    
T  44455257 tcattgatagtggattggagagatcaatctctcccccagattaggtca 44455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 12318568 - 12318506
Alignment:
Q  185 tctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgttct 247  Q
    |||||||| || ||||| ||||| ||| |||||||||| ||||||||| ||||||||||||||    
T  12318568 tctctcccccatagtagttcattattggaccgaactaggtaaacaattttttggtgttgttct 12318506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 13138096 - 13137999
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcat 206  Q
    |||||| ||| |||||| ||||||||  |||||||||||||| || ||   ||||| |||||||||| ||||| |||||||||||  ||||||||||||    
T  13138096 cttgttgaagctaatttcttgtaacccatttgcatctctttgtaagaaca-cattgatagtggattgaagagagcaatctctcccctagagtaggtcat 13137999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 29136252 - 29136421
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||| ||||  |||| || |||||| || || | |||||     
T  29136252 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttggaacccatttgtatttctttgtaagaact-cattga 29136350  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctt 235  Q
    | |||||||||||||||||||||||||  ||||||||||||   ||| |||||||||| | |||| |||||    
T  29136351 tcgtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaacatttctt 29136421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 16455627 - 16455750
Alignment:
Q  66 gagattggaaaaatggt-agaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| |||||||| ||||||||||||| | || |  || |||||| ||| |||||| ||||||||  |||| |||||| || || || | |||||     
T  16455627 gagattggtaaaatggtgagaaattagattttttctagt-gagcttgttgaagctaatttcttgtaacccatttgtatctctgtgtaagaact-cattga 16455724  T
Q  165 tagtggattggagagatcaatctctc 190  Q
    ||||||||||||||||||||||||||    
T  16455725 tagtggattggagagatcaatctctc 16455750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 25652225 - 25652266
Alignment:
Q  202 gtcattgttgtaccgaactagataaacaattctttggtgttg 243  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  25652225 gtcattgttgaaccgaactggataaacaattctttggtgttg 25652266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 2263095 - 2262983
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| |||||||| ||||  |||| |||| ||  || | |||| |||||||||| |||||||||||| ||||  || ||||||||||    
T  2263095 cttgttgaagataatttcttgtaacccttttatatctttttgtaaagaacttattgatagtggattgaagagatcaatctttcccttagggtaggtcatt 2262996  T
Q  208 gttgtaccgaact 220  Q
    ||||  |||||||    
T  2262995 gttggtccgaact 2262983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 1833619 - 1833666
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||||||||||||||||||  |||| |||||||    
T  1833619 tcattgatagtggattggagagatcaatctctccaccagattaggtca 1833666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 3189427 - 3189474
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||||    
T  3189427 tcattgatagtggattggagagatcaatctctcatccagagtaggtca 3189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 3198244 - 3198291
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||||    
T  3198244 tcattgatagtggattggagagatcaatctctcatccagagtaggtca 3198291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 3207083 - 3207130
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||||    
T  3207083 tcattgatagtggattggagagatcaatctctcatccagagtaggtca 3207130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 3460706 - 3460821
Alignment:
Q  71 tggaaaaatggtagaaattaga-tttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtg 169  Q
    |||||||| ||||||||||||| ||||| |||   || |||||| ||| ||||||||||||||| ||||| || |||||| ||  ||   |||| ||||     
T  3460706 tggaaaaagggtagaaattagagtttgttctttgtgagcttgttgaagctaatttattgtaacccttttgtatatctttgtaaagaacatattgatagtc 3460805  T
Q  170 gattggagagatcaat 185  Q
    ||||||||||||||||    
T  3460806 gattggagagatcaat 3460821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 10925271 - 10925357
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaa--attcattggtagtggattggagagatcaatctctccc 192  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || ||  |||||||| |||||||||||||| |||||||||||||    
T  10925271 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaagaattcattgatagtggattggagaaatcaatctctccc 10925357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 19752734 - 19752855
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| ||| |||||||||||||||||||||| | || | |||||||      
T  19752734 cttgttgaagctaatttcttgtaaccgatttgtatctctttgtaagaact-cattgatagaggattggagagatcaatctctctcccatattaggtca-a 19752831  T
Q  208 gttgtaccgaactagataaacaat 231  Q
    |||| |||||||||| | ||||||    
T  19752832 gttggaccgaactaggtcaacaat 19752855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 222
Target Start/End: Original strand, 34603541 - 34603737
Alignment:
Q  25 cttgggaaagtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatt 123  Q
    |||||||||||||||| |  |||||||||| || || |  | |||||| |||||||| ||||||||||  |||| |||   || |||||| ||| |||||    
T  34603541 cttgggaaagtgaaaattcatgagtgtcttgttcattggtg-agattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatt 34603639  T
Q  124 tattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 222  Q
    | ||||||||  ||||  ||||||||| || || | ||||| | |||||||| ||||||||||||||||  ||||||||||||  |||| ||||||||||    
T  34603640 tcttgtaacccattttttatctctttgtaagaact-cattgatggtggattgaagagatcaatctctcctccagagtaggtca-agttggaccgaactag 34603737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 36683777 - 36683824
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||| ||| ||||||||||||| ||||||||||||    
T  36683777 tcattgatagtggattgtagaaatcaatctctcccccagagtaggtca 36683824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 37503628 - 37503589
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacaga 197  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  37503628 tcattgatagtggattggagagatcaatctctcccccaga 37503589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 45644425 - 45644378
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||||||||||||||| |||||| |||| |||||||    
T  45644425 tcattgatagtggattggagagatcaatatctcccccagattaggtca 45644378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 41360919 - 41361083
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||  |||||| ||||||||  |||| ||||||||| ||  || || |||     
T  41360919 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gaactcgttga 41361017  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaat 231  Q
    |||||||||  |||||||||| |||||| || ||||||||| | ||| |||||||||| | ||||||    
T  41361018 tagtggattaaagagatcaatatctcccccatagtaggtca-tattggaccgaactaggtcaacaat 41361083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 227
Target Start/End: Complemental strand, 44650282 - 44650165
Alignment:
Q  109 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattg 208  Q
    ||||||| | |||||||||||||   ||||  ||||||||| ||  ||||||||  |||||||||| |||||||||||||| ||  | ||||||||| |     
T  44650282 ttgttaacgctaatttattgtaaatcttttatatctctttgtaaataattcattaatagtggattgaagagatcaatctcttcccaaaagtaggtcaat- 44650184  T
Q  209 ttgtaccgaactagataaa 227  Q
    ||| |||||||||| ||||    
T  44650183 ttggaccgaactaggtaaa 44650165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 193659 - 193739
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctct 189  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||| |||||||||||||||||||||||||    
T  193659 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaataact-cattgatagtggattggagagatcaatctct 193739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 241
Target Start/End: Complemental strand, 197063 - 196897
Alignment:
Q  73 gaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggat 172  Q
    ||||| |||||||||||||  |||| |||   || |||||| |||||||||| |||||||   |||| ||| ||||| || || | ||||| ||||||||    
T  197063 gaaaattggtagaaattagggttgttctttgtgagcttgtttaagttaatttcttgtaactcatttgtatccctttgtaagaact-cattgatagtggat 196965  T
Q  173 tggagagatcaatctct-cccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgt 241  Q
    |||||||||  |||||| ||| |||| |||||||  |||| |||||||| ||| ||||| ||||||||||    
T  196964 tggagagatttatctctccccccagattaggtca-agttggaccgaactggatcaacaa-tctttggtgt 196897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 5460003 - 5460080
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctt 235  Q
    |||||| |||| |||||||||||||||||||||    ||||||| |||||||||  | ||||||| |||||| |||||    
T  5460003 tcattgatagtagattggagagatcaatctctcatctagagtagatcattgttgggctgaactaggtaaacatttctt 5460080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 8871126 - 8871089
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtagg 202  Q
    |||||||||||||||||||||||||||| || ||||||    
T  8871126 tagtggattggagagatcaatctctcccccatagtagg 8871089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 32471510 - 32471579
Alignment:
Q  110 tgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 179  Q
    |||| |||||||||||||| |||  ||||| ||||||||| || ||| |||||| ||||||||| |||||    
T  32471510 tgttgaagttaatttattgcaactcttttgtatctctttgtaagaaactcattgatagtggattcgagag 32471579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 37560017 - 37559905
Alignment:
Q  80 ggtagaaattagatttgtgcttgaagatcttgtt-aaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggaga 178  Q
    ||||||||||||| |||| |||   || |||||| |||| |||||| ||||||||  |||| ||||||||| || || | | ||| ||||| ||||||||    
T  37560017 ggtagaaattagagttgttctttgtgaacttgttgaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cgttgatagtgaattggaga 37559919  T
Q  179 gatcaatctctccc 192  Q
    ||||||||||||||    
T  37559918 gatcaatctctccc 37559905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 40122260 - 40122186
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgt 241  Q
    ||||||||| |||||||||||||||||| || | |||||||  |||| |||||||||| | ||||| ||||||||||    
T  40122260 tagtggattagagagatcaatctctcccccatattaggtca-agttggaccgaactaggtcaacaa-tctttggtgt 40122186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 51765494 - 51765538
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtagg 202  Q
    |||||| ||||||||||||||| |||||||||||  |||||||||    
T  51765494 tcattgatagtggattggagagttcaatctctcctccagagtagg 51765538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 5e-31; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 75 - 247
Target Start/End: Original strand, 316777 - 316948
Alignment:
Q  75 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattg 174  Q
    |||| |||||||||||| ||||| |||| ||| |||||| ||| |||||| |||||| | ||||| ||||||||| ||  || |||||| || ||||| |    
T  316777 aaaaaggtagaaattaggtttgttcttggagagcttgttgaagctaatttcttgtaatccttttgtatctctttgtaaagaactcattgataatggatcg 316876  T
Q  175 gagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgttct 247  Q
    ||| ||||||||||||||  ||||||||||||||||| |||||||| | ||||||||||||| ||||||||||    
T  316877 gagggatcaatctctcccctagagtaggtcattgttggaccgaacttggtaaacaattcttt-gtgttgttct 316948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 3325922 - 3326063
Alignment:
Q  69 attggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagt 168  Q
    |||| ||||| |||||||||||| ||||| |||||||| |||||| ||| |||||| |||||||| || || ||||||||| ||  || ||| || | ||    
T  3325922 attgaaaaaaaggtagaaattagttttgttcttgaagagcttgttgaagctaatttcttgtaaccattgtgtatctctttgtaaagaactcaatgatggt 3326021  T
Q  169 ggattggagagatcaatctctcccacagagtaggtcattgtt 210  Q
    ||||| ||||||||||| |||| |||| ||||||||||||||    
T  3326022 ggattagagagatcaatatctctcacatagtaggtcattgtt 3326063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 25412766 - 25412904
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    |||||||| |||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  25412766 gagattgggaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 25412864  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  25412865 agtggattggagagatcaatctctcctccagagtaggtca 25412904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 246
Target Start/End: Complemental strand, 10054964 - 10054799
Alignment:
Q  80 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 179  Q
    |||||||||||  ||||| ||||||||  ||||| ||| |||||| || ||||||||| | ||||||||| ||  || |||||| ||||| ||||||||     
T  10054964 ggtagaaattatgtttgttcttgaagagtttgttgaagctaatttcttataacctttt-gtatctctttgtaatgaactcattgatagtgtattggagat 10054866  T
Q  180 atcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgttc 246  Q
    |||||| |||||| || ||| ||| ||||||| ||| |||||| ||||| | |||||||||||||||    
T  10054865 atcaatatctcccccaaagtgggtaattgttggaccaaactaggtaaacgactctttggtgttgttc 10054799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 247
Target Start/End: Complemental strand, 10700809 - 10700632
Alignment:
Q  67 agattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggta 166  Q
    |||||||||||| |||||||||||| ||||| |||  ||| |||||| ||| |||||  || |||| |||||| |||||||| |||  || |||||| ||    
T  10700809 agattggaaaaaaggtagaaattaggtttgttcttagagagcttgttgaagctaattc-ttataacatttttgtatctctttaaaaagaactcattgata 10700711  T
Q  167 gtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgttct 247  Q
    ||| | ||||||||||  |||||||| || ||||||||||||||  ||||||||   |||| |||||||| ||||||||||    
T  10700710 gtgaagtggagagatc--tctctcccccatagtaggtcattgtttcaccgaactgagtaaataattctttcgtgttgttct 10700632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 28278364 - 28278489
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || ||| |||||| |||||||||||||||||||||||||||  ||||||||||||      
T  28278364 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-aaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-a 28278461  T
Q  208 gttgtaccgaactagataaacaattctt 235  Q
    |||| |||||||| | | ||||||||||    
T  28278462 gttggaccgaactgggtgaacaattctt 28278489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 16452085 - 16452253
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| |||||||||  ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||      
T  16452085 gagattggaaaaatgggtagaaattaagtttgttctttctgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattca 16452183  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctt 235  Q
    ||||||||||||||||| |||||||||| ||||||||||||  |||| |||||||| | |||||| |||||    
T  16452184 tagtggattggagagataaatctctcccccagagtaggtca-agttggaccgaactgggtaaacatttctt 16452253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 242
Target Start/End: Complemental strand, 33906179 - 33906017
Alignment:
Q  80 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 179  Q
    |||| ||||||| || ||||||| ||| |||||  ||| ||| || |||||| | ||||| ||||||||| ||  || |||||| |||| ||||||| ||    
T  33906179 ggtataaattaggttagtgcttggagagcttgtcgaagctaacttcttgtaatccttttgtatctctttgtaaagaactcattgatagtagattggaaag 33906080  T
Q  180 atcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgtt 242  Q
    |||||||||| ||  ||||||||||| ||||| ||||| || | ||||||||||||| |||||    
T  33906079 atcaatctcttccctagagtaggtcaatgttggaccgagctgggtaaacaattcttttgtgtt 33906017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 241
Target Start/End: Original strand, 30182600 - 30182767
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||  ||||||||| || || | ||||| |||||||    
T  30182600 ggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttctatctctttggaagaact-cattgatagtgga 30182698  T
Q  172 ttggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgt 241  Q
    |||||||| |||||||||||  ||||||| ||||   ||| |||||||| ||| ||||| ||||||||||    
T  30182699 ttggagagttcaatctctcctccagagtatgtcaagtttggaccgaactggatgaacaa-tctttggtgt 30182767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 37439189 - 37439285
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| ||||||||||| |||||||  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  37439189 cttgtcaaagttaatttcttgtaactcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 37439285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 213470 - 213609
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||||||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  213470 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 213568  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  || |||||||||    
T  213569 tagtggattggagagatcaatctctcctccatagtaggtca 213609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 13239756 - 13239895
Alignment:
Q  66 gagattggaaaaa-tggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    ||||||||||||| |||||||||||||  || | |||   || |||||| ||| |||||| |||||||  ||||| ||||||||| || || | |||||     
T  13239756 gagattggaaaaaatggtagaaattagggtttttctttgtgaacttgttgaagctaatttcttgtaactcttttgtatctctttgtaagaact-cattga 13239854  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  13239855 tagtggattggagagatcaatctctcctccagagtaggtca 13239895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 33831685 - 33831824
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| |||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  33831685 gagattggaaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 33831783  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||| ||||||||||||||||| || | |||||||    
T  33831784 tagtggattgaagagatcaatctctcccccatattaggtca 33831824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 220
Target Start/End: Original strand, 13343075 - 13343219
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||| | ||||| |||||||||||   || |||||| |||||||||    
T  13343075 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaatccttttgtatctctttgaag--aactcattgatagtggatt 13343172  T
Q  174 ggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 220  Q
    |||||| |||||||||||  |||||||||||||  ||| ||||||||    
T  13343173 ggagagttcaatctctcctccagagtaggtcatgtttggaccgaact 13343219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 27637677 - 27637622
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 220  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  27637677 tagtggattggagagatcaatctctcctgcagagtaggtcattgttggaccgaact 27637622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 30683044 - 30682946
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaa-attcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| |||||||| ||||| || |||||| || || | |||||| |||||||||||||||||||||||||||| |||| |||||||    
T  30683044 cttgttgaagctaatttcttgtaacccttttgtatttctttgtaagaatactcattgatagtggattggagagatcaatctctcccccagattaggtca 30682946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 16409480 - 16409656
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    ||||||||||||| ||||||||||||  |||| |||   || ||||| |||  |||||| |||||||  ||||| ||||||||   |  || |||||| |    
T  16409480 gagattggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgat 16409579  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaat-tctttggtgt 241  Q
    |||||||||||||| |||||||||||  ||||||||||||   ||| |||||||| | | |||||| ||||||||||    
T  16409580 agtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgt 16409656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 28750818 - 28750679
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| ||| | ||  ||||| ||||||||||  |||||||  |||| |||| |||| || || | |||||     
T  28750818 gagattgggaaaatgggtagaaattagggttgttctttatgaaattgttgaagttaatttcctgtaacccatttgtatctttttgtaagaact-cattga 28750720  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  28750719 tagtggattggagagatcaatctctcccccagattaggtca 28750679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 241
Target Start/End: Complemental strand, 36074196 - 36074032
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||  ||||| |||||||||||   || |||||| |||||||||    
T  36074196 aaaaagggtagaaattagggttgttctttgcgaacttgtcaaagctaatttcttgtaactcttttgtatctctttgaag--aactcattgatagtggatt 36074099  T
Q  174 ggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgt 241  Q
    |||||| |||||||||||  || |||||||||   ||| |||||||| ||| ||||| ||||||||||    
T  36074098 ggagagttcaatctctcctccaaagtaggtcaagtttggaccgaactggatgaacaa-tctttggtgt 36074032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 38747010 - 38747141
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || ||| ||||||     
T  38747010 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttggaa-aaactcattga 38747108  T
Q  165 tagtggattggagagatcaatctctcccacaga 197  Q
    ||| |||||||||||||||||||||||| ||||    
T  38747109 tagaggattggagagatcaatctctccctcaga 38747141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 40147266 - 40147405
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  40147266 gagattgggaaaatgggtagaaattagggttgttcttcgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattga 40147364  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  40147365 tagtggattggagagatcaatctctcctccagagtaggtca 40147405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 4160703 - 4160758
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 220  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||| ||||    
T  4160703 tagtggattggagagatcaatctctcctccagagtaggtcattgttggaccaaact 4160758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 13488209 - 13488347
Alignment:
Q  67 agattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    ||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |    
T  13488209 agattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgat 13488307  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||| |||||||    
T  13488308 agtggattggagagatcaatctctccccgagattaggtca 13488347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 538073 - 538203
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||| ||||||||||||||||||||||| || | |||||||      
T  538073 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtagattggagagatcaatctctcccccatattaggtca-a 538170  T
Q  208 gttgtaccgaactagataaacaattctttggtgt 241  Q
    |||| |||||||| ||| ||||| ||||||||||    
T  538171 gttggaccgaactggatcaacaa-tctttggtgt 538203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 242
Target Start/End: Complemental strand, 14689581 - 14689415
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    |||| ||||||||||||  ||||| | || ||  |||||| ||| |||||| ||||||  |||||| ||||||||| ||  |||| |||| ||||| |||    
T  14689581 aaaattggtagaaattatgtttgttcatggagtgcttgttgaagctaattttttgtaatatttttgtatctctttgtaaataatttattgttagtgaatt 14689482  T
Q  174 ggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgtt 242  Q
     || |||||  ||||| || ||| ||| |||||||||| || ||||||| |||||||||||||| ||||    
T  14689481 tgatagatc--tctcttcctcagggtatgtcattgttggactgaactaggtaaacaattctttgttgtt 14689415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 30793195 - 30793309
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaa 218  Q
    ||||||||||||||| ||||| ||||||||| ||  || | |||| ||||| | ||||||||||  ||||||||  |||||| |||||||||| ||||||    
T  30793195 taatttattgtaaccattttgtatctctttgtaaagaactaattgatagtgaagtggagagatc--tctctcccctagagtaagtcattgttggaccgaa 30793292  T
Q  219 ctagataaacaattctt 235  Q
    | || |||||| |||||    
T  30793293 caaggtaaacatttctt 30793309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 32636872 - 32636968
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| |||| |||||| ||||||||  |||| ||||||||| || || | | ||| |||||||||||||||||||||||||||| |||| |||||||    
T  32636872 cttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-ctttgatagtggattggagagatcaatctctcccccagattaggtca 32636968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 42428550 - 42428454
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||    
T  42428550 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccatattaggtca 42428454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 9049462 - 9049368
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggt 203  Q
    |||||| ||| |||||| |||||||| ||||| ||||||||| || || | |||||  |||||||||||||||||||| |||||| || |||||||    
T  9049462 cttgttgaagctaatttcttgtaaccattttgtatctctttgtaagaact-cattgacagtggattggagagatcaatatctcccccaaagtaggt 9049368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 39468712 - 39468586
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  39468712 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 39468614  T
Q  165 tagtggattggagagatcaatctctccc 192  Q
    ||||||||| ||||||||||||||||||    
T  39468613 tagtggattagagagatcaatctctccc 39468586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 533817 - 533913
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||| ||||||||||||||| || | |||||||    
T  533817 cttgttgaagctaattttttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggaaagatcaatctctcccccatattaggtca 533913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 8566017 - 8565945
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaat 231  Q
    |||||| |||||||||||||||||||||||||| | |||| |||||||  |||| |||||||||| | ||||||    
T  8566017 tcattgatagtggattggagagatcaatctctcacccagattaggtca-agttggaccgaactaggtcaacaat 8565945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 9789295 - 9789211
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaat-tctttggtgt 241  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||   ||| |||||||| | | |||||| ||||||||||    
T  9789295 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgt 9789211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 16641004 - 16640964
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  16641004 tagtggattggagagatcaatctctcctccagagtaggtca 16640964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 18441811 - 18441635
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    ||||||||||||| ||||||||||||  |||| | |   || ||||| |||  |||||| |||||||  ||||| ||||||||   |  || |||||| |    
T  18441811 gagattggaaaaagggtagaaattagggttgttccttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgat 18441712  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaat-tctttggtgt 241  Q
    |||||||||||||| |||||||||||   |||||||||||   ||| |||||||| | | |||||| ||||||||||    
T  18441711 agtggattggagagttcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgt 18441635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 19806467 - 19806507
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  19806467 tagtggattggagagatcaatctctcccccagattaggtca 19806507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 26170859 - 26170943
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaat-tctttggtgt 241  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||   ||| |||||||| | | |||||| ||||||||||    
T  26170859 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgt 26170943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 26177979 - 26178063
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaat-tctttggtgt 241  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||   ||| |||||||| | | |||||| ||||||||||    
T  26177979 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgt 26178063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 42426354 - 42426259
Alignment:
Q  109 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| ||| |||||| ||| ||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| | || |||||||    
T  42426354 ttgttgaagctaatttcttgcaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctccccctgattaggtca 42426259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 5058142 - 5058189
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||||||||||||||||||   |||||||||||    
T  5058142 tcattgatagtggattggagagatcaatctctcctctagagtaggtca 5058189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 3075732 - 3075682
Alignment:
Q  155 aattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| ||| ||||| |||||||||||||||||||||| || |||||||||    
T  3075732 aattcgttgatagtgaattggagagatcaatctctccctcatagtaggtca 3075682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 201
Target Start/End: Complemental strand, 42310055 - 42309963
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtag 201  Q
    |||||| ||| |||||| |||||||  ||||| ||||||||| || || || |||| ||||||||| | |||||||||||||||| || |||||    
T  42310055 cttgttgaagctaatttcttgtaactcttttgtatctctttgtaagaactt-attgatagtggattagcgagatcaatctctcccccatagtag 42309963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 35616190 - 35616258
Alignment:
Q  81 gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg 149  Q
    ||||||||||| ||||| |||| ||| || ||| |||||||||| |||||||| ||||| || ||||||    
T  35616190 gtagaaattaggtttgttcttggagagctcgtttaagttaatttcttgtaacccttttgtatttctttg 35616258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 247
Target Start/End: Original strand, 33089900 - 33090065
Alignment:
Q  82 tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagat 181  Q
    |||||||||  ||||| |||| ||| |||||| ||| ||||||||| ||||| ||||| |||||| || ||  || |||||| ||||||||| |||||||    
T  33089900 tagaaattatgtttgttcttggagagcttgttgaagctaatttattataaccattttgtatctctctgtaaagaactcattgatagtggattagagagat 33089999  T
Q  182 caatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgttct 247  Q
    ||||||||||   ||||||||| ||||||| |||| ||||||||||||||||||||  ||||||||    
T  33090000 caatctctcctctagagtaggttattgttggaccggactagataaacaattctttgaagttgttct 33090065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 30 - 235
Target Start/End: Complemental strand, 22882949 - 22882746
Alignment:
Q  30 gaaagtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattg 128  Q
    |||||||||||  |||||||| ||| || |||||| ||||||| |||||||| || ||||||| ||||| |||| |||  ||||| ||| |||||| |||    
T  22882949 gaaagtgaaaatcattgagtgccttgttcatggaaagagattg-aaaaatggataaaaattaggtttgttcttggagagtttgttgaagctaatttcttg 22882851  T
Q  129 taacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaac 228  Q
    ||||| ||||| ||||||| | ||  || |||||||||||||||| |||| |||||  |||||| | |||||||||||||||| |||||||| |||||||    
T  22882850 taacccttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaa--tctcccccggagtaggtcattgttggaccgaactggataaac 22882753  T
Q  229 aattctt 235  Q
    | |||||    
T  22882752 atttctt 22882746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 30 - 235
Target Start/End: Complemental strand, 22934613 - 22934410
Alignment:
Q  30 gaaagtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattg 128  Q
    |||||||||||  |||||||| ||| || |||||| ||||||| |||||||| || ||||||| ||||| |||| |||  ||||| ||| |||||| |||    
T  22934613 gaaagtgaaaatcattgagtgccttgttcatggaaagagattg-aaaaatggataaaaattaggtttgttcttggagagtttgttgaagctaatttcttg 22934515  T
Q  129 taacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaac 228  Q
    ||||| ||||| ||||||| | ||  || |||||||||||||||| |||| |||||  |||||| | |||||||||||||||| |||||||| |||||||    
T  22934514 taacccttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaa--tctcccccggagtaggtcattgttggaccgaactggataaac 22934417  T
Q  229 aattctt 235  Q
    | |||||    
T  22934416 atttctt 22934410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 12119598 - 12119722
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaa 218  Q
    |||||| |||||||| ||||| ||||||||| ||  || |||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  12119598 taatttcttgtaacccttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctctccca-agagtaggtcattgttggaccgaa 12119696  T
Q  219 ctagataaacaattctttggtgttgt 244  Q
    |||| | |||||||  ||||||||||    
T  12119697 ctaggtgaacaatttcttggtgttgt 12119722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 12073397 - 12073575
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||| ||||||||||||||   |||| ||||||||| || || | |||||     
T  12073397 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttattgtaactcatttgtatctctttgtaagaact-cattga 12073495  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    ||||||||||||||||||||||||||   |||||||||||||||||| |||||||||| | |||| ||| |||||||||||    
T  12073496 tagtggattggagagatcaatctctcttccagagtaggtcattgttggaccgaactaggtgaacatttc-ttggtgttgtt 12073575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 245
Target Start/End: Original strand, 379400 - 379563
Alignment:
Q  80 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 179  Q
    |||||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || |  |||| |||||||||||||||    
T  379400 ggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgctttgtaagaacta-attgatagtggattggagag 379498  T
Q  180 atcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    ||||||||||||  |||||||||||||||||| |||||||| ||| |||| ||| |||||||||||    
T  379499 atcaatctctcctccagagtaggtcattgttggaccgaactggatgaacatttc-ttggtgttgtt 379563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 56178793 - 56178661
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||| ||||||||||||  |||| |||   || |||||| ||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||    
T  56178793 ggaaaaagggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgatagtgga 56178695  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||  ||||||||||||    
T  56178694 ttggagagatcaatctctcctccagagtaggtca 56178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 27417128 - 27416989
Alignment:
Q  66 gagattggaaaaatg-gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| |||||| |||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || ||| ||||||     
T  27417128 gagattggtaaaatgtgtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-aaactcattga 27417030  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  27417029 tagtggattggagagatcaatctctcccccagattaggtca 27416989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 242
Target Start/End: Original strand, 34112838 - 34112997
Alignment:
Q  81 gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagaga 180  Q
    ||||||||||  ||||| || | ||| |||||| ||| ||||||  ||||||| ||||||||||||||| ||  || |||||| ||||| | ||||||||    
T  34112838 gtagaaattatgtttgttctaggagagcttgttgaagctaatttcatgtaacccttttgcatctctttgtaaagaactcattgatagtgaagtggagaga 34112937  T
Q  181 tcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgtt 242  Q
    ||  ||||||||  | ||||||||||||||| |||||| | | ||||||||| |||||||||    
T  34112938 tc--tctctcccctatagtaggtcattgttggaccgaatttggtaaacaattatttggtgtt 34112997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 40632450 - 40632575
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||| |||| |||   || |||||| ||| |||||| ||||||||| |||| ||||||||| || || | |||||     
T  40632450 gagattgggaaaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgtaagaact-cattga 40632548  T
Q  165 tagtggattggagagatcaatctctcc 191  Q
    |||||||||||||||||||||||||||    
T  40632549 tagtggattggagagatcaatctctcc 40632575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 46703505 - 46703658
Alignment:
Q  66 gagattggaaaaatg-gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattg 163  Q
    |||||||| |||||| |||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  ||||| ||||||||| || || | ||||     
T  46703505 gagattgggaaaatgagtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaagaact-cattt 46703603  T
Q  164 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaa 218  Q
     |||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  46703604 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 46703658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 205
Target Start/End: Original strand, 8665428 - 8665552
Alignment:
Q  80 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 179  Q
    ||||||||||||  |||| |||  ||| |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||    
T  8665428 ggtagaaattagggttgttctttgagagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagag 8665526  T
Q  180 atcaatctctcccacagagtaggtca 205  Q
    ||||||||||||  ||||||||||||    
T  8665527 atcaatctctcctccagagtaggtca 8665552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 9927621 - 9927482
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  9927621 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 9927523  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  9927522 tagtggattggagagatcaatctctcccccagattaggtca 9927482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 26699563 - 26699451
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| |||||||  ||||| ||||||||| ||  || |||||  || ||||||||||||||||||||||  | ||||||||||||||    
T  26699563 cttgttgaagctaatttcttgtaactcttttgtatctctttgtaaagaactcatttataatggattggagagatcaatctctatcccagagtaggtcatt 26699464  T
Q  208 gttgtaccgaact 220  Q
    |||| ||||||||    
T  26699463 gttggaccgaact 26699451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 37229885 - 37229716
Alignment:
Q  66 gagattggaaaaatggtagaaattagatt-tgtgcttgaagatcttgttaaagttaatttattgtaacc-tttttgcatctctttgaaacaaattcattg 163  Q
    |||||||| |||||||||||||||||  | ||| |||   || ||||||||||  ||||| |||||||| |||||  ||||||||| || || | ||||     
T  37229885 gagattgggaaaatggtagaaattagggtgtgttctttgtgagcttgttaaagcaaatttgttgtaaccctttttatatctctttgtaagaact-cattt 37229787  T
Q  164 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctt 235  Q
     |||||||||||||||||||||||||||| || |||||||||  |||| |||||||||| |||||| |||||    
T  37229786 atagtggattggagagatcaatctctccctcatagtaggtca-agttggaccgaactaggtaaacatttctt 37229716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 2209761 - 2209898
Alignment:
Q  108 cttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcat 206  Q
    |||||| ||| |||||| ||||||||  ||||| ||||||||| || || | ||||| ||||||||||||||||| |||||||||  |||||||||||||    
T  2209761 cttgttgaagctaatttcttgtaacccattttgtatctctttgtaagaact-cattgatagtggattggagagattaatctctcctccagagtaggtcat 2209859  T
Q  207 tgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
     |||| |||||||| | | ||||||   |||||||||||    
T  2209860 ggttggaccgaactgggtgaacaatctcttggtgttgtt 2209898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 235
Target Start/End: Complemental strand, 6542376 - 6542174
Alignment:
Q  33 agtgaaaagtattgagtgtcttatttatggaaggagattgg--aaaaatggtagaaattag-atttgtgcttgaagatcttgttaaagttaatttattgt 129  Q
    |||||||| ||||||||||||| || || |  |||||||||  |||||||||||||||||| |||||| |||   || |||||| ||  |||||| ||||    
T  6542376 agtgaaaattattgagtgtcttgttcattgg-ggagattgggaaaaaatggtagaaattaggatttgttctttgtgagcttgttgaaactaatttcttgt 6542278  T
Q  130 aacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaaca 229  Q
     | | ||||| ||||||||| || || | | ||| |||||||||||||||||||||||||||| ||| ||||||||  |||| |||||||| | ||||||    
T  6542277 tagccttttgtatctctttgtaagaact-cgttgatagtggattggagagatcaatctctcccccagggtaggtca-agttggaccgaactgggtaaaca 6542180  T
Q  230 attctt 235  Q
     |||||    
T  6542179 tttctt 6542174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 50262821 - 50262685
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||| ||||||||| |||||||| |||  ||||||||||||||    
T  50262821 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagttgattggagatatcaatctttcctccagagtaggtcatt 50262723  T
Q  208 gttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||| |||||||| | | ||||||   |||||||||||    
T  50262722 gttggaccgaactgggtgaacaatctcttggtgttgtt 50262685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 50673967 - 50673833
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||      
T  50673967 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca-a 50673870  T
Q  208 gttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||| |||||||||| | |||| ||| |||||||||||    
T  50673869 gttggaccgaactaggtgaacatttc-ttggtgttgtt 50673833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 52095525 - 52095389
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| ||||||||| || |||| | |||     
T  52095525 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaaat-ctttga 52095427  T
Q  165 tagtggattggagagatcaatctctcccacagagtagg 202  Q
    |||||||||||||||||||||||||||  |||||||||    
T  52095426 tagtggattggagagatcaatctctcctccagagtagg 52095389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 37740635 - 37740761
Alignment:
Q  70 ttggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtg 169  Q
    ||||||||| |||| |||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||    
T  37740635 ttggaaaaagggtataaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtg 37740733  T
Q  170 gattggagagatcaatctctcccacaga 197  Q
    ||||||||||||||||||||||| ||||    
T  37740734 gattggagagatcaatctctcccccaga 37740761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 48143057 - 48143187
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || |||||| ||| |||||| |||||||| ||||| |||||||   || || | ||||| |||||||||    
T  48143057 aaaaaaggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctcttcataagaact-cattgatagtggatt 48143155  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||  ||||||||||||    
T  48143156 ggagagatcaatctctcctccagagtaggtca 48143187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 26175745 - 26175660
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  26175745 taatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccagattaggtca 26175660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 33989893 - 33989991
Alignment:
Q  109 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    ||||| ||| |||||| |||||| | ||||| ||||||||| ||  || || ||  |||||||||||||||||||||||||||  ||||||||||||||    
T  33989893 ttgttgaagctaatttcttgtaatccttttgtatctctttgtaaataactcgttaatagtggattggagagatcaatctctccaccagagtaggtcatt 33989991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 203
Target Start/End: Complemental strand, 34570577 - 34570440
Alignment:
Q  66 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||| ||||||||||||  |||| |||   || |||||| ||| |||||| ||||||||   ||| ||||||||| || || | |||||     
T  34570577 gagattgggaaaataggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccaattgtatctctttgtaagaact-cattga 34570479  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggt 203  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  34570478 tagtggattggagagatcaatctctcccccagattaggt 34570440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 38811235 - 38811173
Alignment:
Q  185 tctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgttct 247  Q
    ||||||||  ||||||||||||||||| |||||||| | |||||||||||| |||||||||||    
T  38811235 tctctccccaagagtaggtcattgttggaccgaactgggtaaacaattcttcggtgttgttct 38811173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 41964463 - 41964560
Alignment:
Q  108 cttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||||||||||||  ||||| ||| ||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  41964463 cttgtttaagctaatttattgtaacccattttgtatccctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 41964560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 4587970 - 4588090
Alignment:
Q  72 ggaaaaatggtagaaatta-gatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgg 170  Q
    ||||||| ||||||||||| ||||||| |||    | |||||| ||| |||||| |||||||| ||||| ||||||||| || || | ||||| ||||||    
T  4587970 ggaaaaaaggtagaaattaagatttgttctttgtaagcttgttgaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgatagtgg 4588068  T
Q  171 attggagagatcaatctctccc 192  Q
    |||||||||| |||||||||||    
T  4588069 attggagagaacaatctctccc 4588090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 12744045 - 12743949
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| |||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||    
T  12744045 cttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccatattaggtca 12743949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 12745434 - 12745338
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| |||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||    
T  12745434 cttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccatattaggtca 12745338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 12739713 - 12739574
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| |||| |||| |  || | |||||     
T  12739713 gagattgggaaaatggatagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctatttgtatgaact-cattga 12739615  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  12739614 tagtggattggagagatcaatctctcccccagattaggtca 12739574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 26364241 - 26364380
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||      
T  26364241 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattaa 26364339  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  26364340 tagtggattggagagatcaatctctcccccagattaggtca 26364380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 205
Target Start/End: Complemental strand, 5370197 - 5370107
Alignment:
Q  114 aaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||| |||||| |||||||| ||||| ||||||||| || || | ||||| ||||||| | |||||||||||||||||  ||||||||||||    
T  5370197 aaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgatagtggactagagagatcaatctctcctccagagtaggtca 5370107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 5429727 - 5429821
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggt 203  Q
    |||||| ||| |||||| ||||||||  |||| |||| |||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||    
T  5429727 cttgttgaagctaatttcttgtaacccatttgtatctatttgtaagaact-cattgatagtggattggagagatcaatctctcccccagattaggt 5429821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 13992364 - 13992282
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgt 241  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||   ||| |||||||||| | ||||| ||||||||||    
T  13992364 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaacaa-tctttggtgt 13992282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 21703956 - 21703830
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| | |||| ||||| |||||||| |||| |||| ||  || ||||||  ||||||||||||| |||||||| |||| || |||||||||||    
T  21703956 cttgttgaagatgatttcttgtaccctttttgtatctttttgtaaagaactcattgacagtggattggagatatcaatctatccc-catagtaggtcatt 21703858  T
Q  208 gttgtaccgaactagataaacaattctt 235  Q
    |||  |||||||| | |||||| |||||    
T  21703857 gtttgaccgaactgggtaaacatttctt 21703830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 29999877 - 29999830
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||    
T  29999877 tcattgatagtggattggagagatcaatctctcctccagagtaggtca 29999830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 37755070 - 37754979
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgtt 210  Q
    |||||| |||||||||||||  ||||||||  || ||| |||||| || ||| ||| ||||||||||||||||| || ||||||| ||||||    
T  37755070 taatttcttgtaacctttttttatctctttctaaaaaactcattgataatggtttgaagagatcaatctctcccccatagtaggtaattgtt 37754979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 47038482 - 47038435
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  47038482 tcattgatagtggattggagagatcaatctctcccccagagtaagtca 47038435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 5208003 - 5207866
Alignment:
Q  68 gattggaaaaatggtagaaattaga-tttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggta 166  Q
    ||||||||||| ||||||||||||  ||||| |||   || |||||| ||| |||||||||| |||| || |  |||| |||| || || | ||||| ||    
T  5208003 gattggaaaaagggtagaaattagggtttgttctttgtgaacttgttgaagctaatttattgcaacccttgtatatctatttgtaagaact-cattgata 5207905  T
Q  167 gtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||| ||||||||||||| | ||||||||||||    
T  5207904 gtggattggaaagatcaatctctctcccagagtaggtca 5207866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 24969117 - 24969238
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| |||||||||||||||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| ||  || | ||||     
T  24969117 gagattggaaaaatgggtagaaattagatttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactaattga 24969215  T
Q  165 tagtggattggagagatcaatct 187  Q
    ||||||||||||||||| |||||    
T  24969216 tagtggattggagagataaatct 24969238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 242
Target Start/End: Complemental strand, 36463509 - 36463378
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | |||  ||||||||||||||||||||||||||| |||| |||||||      
T  36463509 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-ctttgacagtggattggagagatcaatctctcccccagattaggtca-a 36463412  T
Q  208 gttgtaccgaactagataaacaattctttggtgtt 242  Q
    |||| |||||||| | | ||||| |||||||||||    
T  36463411 gttggaccgaactgggtcaacaa-tctttggtgtt 36463378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 6656004 - 6656100
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||| ||||||||||||||||||||||||||   ||||||||||||    
T  6656004 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcatccagagtaggtca 6656100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 12744167 - 12744087
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctct 189  Q
    ||||| |||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||    
T  12744167 cttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctct 12744087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 48893758 - 48893662
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | | ||| |||||||||||||||||||||||||||| |||| |||||||    
T  48893758 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-ctttgatagtggattggagagatcaatctctcccccagattaggtca 48893662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 54883068 - 54883203
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| ||||||||||||| |||||||||||||  |||| || ||||      
T  54883068 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagggatcaatctctcctccagattaagtca-a 54883165  T
Q  208 gttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||| |||||||| | | |||||||  |||||||||||    
T  54883166 gttggaccgaactgggtcaacaatttcttggtgttgtt 54883203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 5871825 - 5871964
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| |||||||||| ||||| |||   || |||||| |||  ||||| ||||||||  |||  ||| ||||| || || | | |||     
T  5871825 gagattggaaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagcaaatttcttgtaacccatttttatcactttgcaagaact-ctttga 5871923  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||| |||||||||||||||||| |||| |||||||    
T  5871924 tagtggattagagagatcaatctctcccccagattaggtca 5871964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 205
Target Start/End: Original strand, 8648188 - 8648283
Alignment:
Q  109 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| ||| |||||| || |||||  |||| ||||||||| || || | ||||| || ||||||||||||||||||||||||  ||||||||||||    
T  8648188 ttgttgaagctaatttcttataacccatttgtatctctttgtaagaact-cattgatattggattggagagatcaatctctcctccagagtaggtca 8648283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 35662446 - 35662585
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    ||||||| |||||||| ||||||||||  |||| ||| | ||  ||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  35662446 gagattgaaaaaatgggtagaaattagggttgttctttatgagtttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattga 35662544  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||| |||||   |||||||||||    
T  35662545 tagtggattggagagatcaatatctcctcaagagtaggtca 35662585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 36994572 - 36994655
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctccc 192  Q
    |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | ||||| ||||||||||||||||||||||||||||    
T  36994572 cttgttgaagctaatttcttgtaacccatttgtatccctttgtaagaact-cattgatagtggattggagagatcaatctctccc 36994655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 41639530 - 41639570
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  41639530 tagtggattggagagatcaatctctcctccagagtaggtca 41639570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 44967992 - 44967821
Alignment:
Q  66 gagattggaaaaatggtagaaattagattt-gtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||||||||||||| ||| |  |||| ||| |||| | |||  ||||| |||||||| ||| | ||||||||| || ||| || |||     
T  44967992 gagattgggaaaatggtagaaattaggttttgctcttggagagcttgctgaagccaatttcttgtaaccattt-gtatctctttgtaaaaaactcgttga 44967894  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttg 237  Q
     ||| |||| ||| |||||||||||||| |||| || |||| ||||| ||||| || | |||||| |||||||    
T  44967893 gagtagattagagggatcaatctctcccccagaataagtcactgttggaccgacctgggtaaacatttctttg 44967821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 12747919 - 12747793
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| |||| |||| |  || | |||||     
T  12747919 gagattgggaaaatggatagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctatttgtatgaact-cattga 12747821  T
Q  165 tagtggattggagagatcaatctctccc 192  Q
    ||||||||||||||||||||||||||||    
T  12747820 tagtggattggagagatcaatctctccc 12747793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Original strand, 3913545 - 3913579
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctccc 192  Q
    |||||| ||||||||||||||||||||||||||||    
T  3913545 tcattgatagtggattggagagatcaatctctccc 3913579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 12745545 - 12745476
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctct 189  Q
    |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||    
T  12745545 taatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctct 12745476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 190
Target Start/End: Original strand, 29254514 - 29254623
Alignment:
Q  80 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 179  Q
    ||||||||||||| ||||  || | || |||||| |||||||||| ||| ||||  ||||  |||||||| || || | | ||| |||||||||||||||    
T  29254514 ggtagaaattagagttgttttttatgagcttgttgaagttaatttcttgcaacccatttgtgtctctttgtaagaact-cgttgatagtggattggagag 29254612  T
Q  180 atcaatctctc 190  Q
    |||||||||||    
T  29254613 atcaatctctc 29254623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 34788928 - 34788854
Alignment:
Q  75 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg 149  Q
    |||||||||||||||||  |||  |||| ||| |||||| |||||||||| |||||||  ||||| |||||||||    
T  34788928 aaaatggtagaaattaggattgctcttggagagcttgttgaagttaatttcttgtaactcttttgtatctctttg 34788854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 51337123 - 51337208
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||| ||||| ||||| ||||||||  || || | ||||| ||||| ||| ||||||||||||||||||||| | |||||||    
T  51337123 taatttattataacccttttgtatctctttttaagaact-cattgatagtgtattagagagatcaatctctcccacacattaggtca 51337208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 205
Target Start/End: Complemental strand, 52467502 - 52467378
Alignment:
Q  80 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 179  Q
    |||||||||||| ||||| |||   || |||||| ||| |||| | ||||||||  |||| ||| ||||| || || ||  ||| |||||||||||||||    
T  52467502 ggtagaaattaggtttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatcactttgtaataacttt-ttgatagtggattggagag 52467404  T
Q  180 atcaatctctcccacagagtaggtca 205  Q
    |||||||||||||  ||| |||||||    
T  52467403 atcaatctctccccgagattaggtca 52467378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 6677482 - 6677597
Alignment:
Q  75 aaaatggtagaaattagatttgtg--cttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggat 172  Q
    ||||||||||||||||| ||| |   |||| ||| |||||| ||| |||||| |||||||| ||||| || |||||| ||  || || ||| || |||||    
T  6677482 aaaatggtagaaattaggttttttttcttggagagcttgttgaagctaatttcttgtaacccttttgtatatctttgtaaagaagtctttgataatggat 6677581  T
Q  173 tggagagatcaatctc 188  Q
    | ||||||||||||||    
T  6677582 ttgagagatcaatctc 6677597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 44570521 - 44570445
Alignment:
Q  73 gaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg 149  Q
    ||||||||||||||||||  |||||  ||| ||| |||||| ||  |||||| ||||||| |||||| |||||||||    
T  44570521 gaaaaatggtagaaattatgtttgttgttggagagcttgttgaaactaatttcttgtaacatttttgtatctctttg 44570445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 229
Target Start/End: Complemental strand, 30218230 - 30218044
Alignment:
Q  43 attgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcat 142  Q
    |||||||||||| || ||||||||||||||  |||  ||||||| |||| ||||| |||| ||| ||| || ||| |||||| |||||||| ||||| ||    
T  30218230 attgagtgtcttgttcatggaaggagattgagaaatgggtagaagttaggtttgttcttggagagcttattgaagctaatttcttgtaaccattttgtat 30218131  T
Q  143 ctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaaca 229  Q
    ||||||| ||  ||||||||| |||||| ||| | ||||||||| ||||| ||||||| |||||||||| || ||||| | ||||||    
T  30218130 ctctttgtaaataattcattgatagtgggttgaaaagatcaatcactcccccagagtaagtcattgttggactgaactcggtaaaca 30218044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 24398105 - 24398242
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| |||||||| ||||| ||||||||| ||  || |||||| || ||||||||||||||||||||||||| || |||||||||||    
T  24398105 cttgttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattgataatggattggagagatcaatctctcccccatagtaggtcatt 24398204  T
Q  208 gttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||| |||||||| | | |||||||  |||||||||||    
T  24398205 gttggaccgaactggctgaacaattacttggtgttgtt 24398242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 33648135 - 33648340
Alignment:
Q  25 cttgggaaagtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatggtagaaattaga-tttgtgcttgaagatcttgttaaagttaatt 123  Q
    ||||||| ||||||||  |||||||||||| |  |||  |||||||||  ||||||||| |||||||  ||||| |||   || |||||| ||| |||||    
T  33648135 cttgggagagtgaaaataattgagtgtcttgtacatgagaggagattgagaaaatggtaaaaattagggtttgttctttgtgagcttgttgaagctaatt 33648234  T
Q  124 tattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactaga 223  Q
    |  ||||||| ||||| || |||||| ||  || |||||| ||| |||||||||||||||||||||||  |||||||||||||||||| |||||||| |     
T  33648235 tcctgtaacccttttgtatttctttgtaaagaactcattgatagcggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactggg 33648334  T
Q  224 taaaca 229  Q
    ||||||    
T  33648335 taaaca 33648340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 45726934 - 45727073
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||| |||| |||   || |||||| ||| |||||| ||||||||| |||| ||||||||| || || | |||||     
T  45726934 gagattgggaaaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgtaagaact-cattga 45727032  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  45727033 tagtggattggagagatcaatctctcctccagagtaggtca 45727073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 36318172 - 36318033
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| ||||||||||  |||| |||   || |||||| ||  |||||||||||||||  |||| ||||||||| || || | |||||     
T  36318172 gagattggaaaaatgggtagaaattagggttgttctttgtgagcttgttgaaactaatttattgtaacccatttgtatctctttgtaagaact-cattga 36318074  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  36318073 tagtggattggagagatcaatctctcccttagagtaggtca 36318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 6595160 - 6595030
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||||||||||||||||  |||| |||   || |||||| ||| |||||| |||||||| ||||| ||||||||| || || | | ||| |||||||||    
T  6595160 aaaaatggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgaatctctttgtaagaact-cgttgatagtggatt 6595062  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||  ||||||||||||    
T  6595061 ggagagatcaatctctcctccagagtaggtca 6595030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 28671978 - 28672097
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||||| |||||||| |||| ||| ||||| ||||||||  ||  || ||| ||  ||||||||||||||||||||||||||  ||||||||||||||    
T  28671978 cttgttaaggttaatttcttgttaccgttttgtatctctttacaaagaactcactgacagtggattggagagatcaatctctcctccagagtaggtcatt 28672077  T
Q  208 gttgtaccgaactagataaa 227  Q
    |||| |||||| ||| ||||    
T  28672078 gttggaccgaattaggtaaa 28672097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 5723418 - 5723294
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    |||||||  |||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||||||||| ||||||||| || || | ||||| |    
T  5723418 gagattgagaaaagggtagaaattaggcttgttctttgtgaacttgtcaaagctaatttcttgtaacctttttgtatctctttgtaagaact-cattgat 5723320  T
Q  166 agtggattggagagatcaatctctcc 191  Q
    ||||||||||||||||||||||||||    
T  5723319 agtggattggagagatcaatctctcc 5723294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 723907 - 723768
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||| ||| |||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | |||||     
T  723907 gagattggaaaactgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaagaact-cattga 723809  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  723808 tagtggattggagagatcaatctctcccccagattaggtca 723768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 4503286 - 4503157
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||  ||||| |||||||||||   || |||||| |||||||||    
T  4503286 aaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttgaag--aactcattgatagtggatt 4503189  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||  ||||||||||||    
T  4503188 ggagagttcaatctctcctccagagtaggtca 4503157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 17450675 - 17450759
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||  |||| |||||||||| | ||||| ||||||||||||||    
T  17450675 tcattgatagtggattggagagatcaatctct-ccacagagtaggtca-agttggaccgaactaggtgaacaa-tctttggtgttgtt 17450759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 30833360 - 30833490
Alignment:
Q  75 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattg 174  Q
    |||| ||||||||||||  |||| |||   || ||||| ||||||||||| |||||||| ||||| ||||||||   |  || |||||| ||||||||||    
T  30833360 aaaagggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctcttttgtaagaactcattgatagtggattg 30833459  T
Q  175 gagagatcaatctctcccacagagtaggtca 205  Q
    ||||| |||||||||||  ||||||||||||    
T  30833460 gagagttcaatctctcctccagagtaggtca 30833490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 1631895 - 1631756
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| ||||||||||  |||| |||   || |||||| ||| |||| | ||||||||  |||| ||||||||| || || | |||||     
T  1631895 gagattggaaaaatgggtagaaattaggattgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatctctttgtaagaact-cattga 1631797  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||| ||||||||||||  ||||||||||||    
T  1631796 tagtggattggagaaatcaatctctcctccagagtaggtca 1631756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 17057532 - 17057393
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| ||||||||||  |||| |||    | |||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  17057532 gagattggaaaaatgggtagaaattagggttgttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctctttgtaagaact-cattga 17057434  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  17057433 tagtggattggagagatcaatctctcccccagactaggtca 17057393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 17085515 - 17085376
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| ||||||||||  |||| |||    | |||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  17085515 gagattggaaaaatgggtagaaattagggttgttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctctttgtaagaact-cattga 17085417  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  17085416 tagtggattggagagatcaatctctcccccagactaggtca 17085376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 35447047 - 35446908
Alignment:
Q  66 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||| ||||||||||||  |||| |||   ||||||||| ||  |||||| ||||||||  |||| ||||||||| || || | |||||     
T  35447047 gagattggtaaaattggtagaaattagggttgttctttgtgatcttgttgaatctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 35446949  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||| |||||||  ||||||||||||    
T  35446948 tagtggattggagagatcactctctcctccagagtaggtca 35446908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 42362357 - 42362496
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | |||||     
T  42362357 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaagaact-cattga 42362455  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||| ||||||||| |||| |||||||    
T  42362456 tagtggattggagagatctatctctcccccagattaggtca 42362496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 45099769 - 45099898
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||  ||||| |||||||||||   || |||||| |||||||||    
T  45099769 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttgaag--aactcattgatagtggatt 45099866  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||  ||||||||||||    
T  45099867 ggagagttcaatctctcctccagagtaggtca 45099898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 205
Target Start/End: Complemental strand, 4484484 - 4484354
Alignment:
Q  75 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattg 174  Q
    |||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||   |  || |||||| ||||||||||    
T  4484484 aaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttttgtaagaactcattgatagtggattg 4484385  T
Q  175 gagagatcaatctctcccacagagtaggtca 205  Q
    ||||| |||||||||||  ||||||||||||    
T  4484384 gagagttcaatctctcctccagagtaggtca 4484354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 36988185 - 36988100
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  36988185 taatttcttgtaactcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 36988100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 2334538 - 2334442
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| | |||||  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  2334538 cttgttgaagctaatttctagtaactcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 2334442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 11690506 - 11690679
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || |||| | |||     
T  11690506 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaagaaat-cgttga 11690604  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgt 241  Q
    |||||||||||||||||||| ||||||| || | || ||||  |||| |||||||| ||| ||||| ||||||||||    
T  11690605 tagtggattggagagatcaacctctcccccatattacgtca-agttggaccgaactggatcaacaa-tctttggtgt 11690679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 29867874 - 29868013
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| ||||||||| || || | | |||     
T  29867874 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-ctttga 29867972  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| || | |||||||    
T  29867973 tagtggattggagagatcaatctctcccccaaattaggtca 29868013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 42020035 - 42019864
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg--aaacaaattcattg 163  Q
    |||||| |||||| ||||||| |||  ||||| |||  | | |||||  ||| |||||| |||||||  ||||| |||||||||  ||| ||| ||||||    
T  42020035 gagattagaaaaagggtagaatttatgtttgttcttataaagcttgtagaagctaatttcttgtaactcttttgtatctctttgtaaaaaaaactcattg 42019936  T
Q  164 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctt 235  Q
     ||||| ||| ||||||||||||||| || || ||||||| ||||||| ||| || | |||||||| |||||    
T  42019935 atagtgaatttgagagatcaatctcttccccatagtaggttattgttggaccaaattggataaacacttctt 42019864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 17490268 - 17490143
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| |||||||  ||||| | ||||||| || || | ||||| |||||||||| |||||||||||||||||  ||||||||||| |    
T  17490268 cttgttgaagctaatttcttgtaactcttttgtaactctttgtaagaact-cattgatagtggattgtagagatcaatctctcccctagagtaggtcaat 17490170  T
Q  208 gttgtaccgaactagataaacaattctt 235  Q
     ||| |||||||| | |||||| |||||    
T  17490169 -ttggaccgaactgggtaaacatttctt 17490143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 34139841 - 34139794
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||||    
T  34139841 tcattgatagtggattggagagatcaatctctcccccagattaggtca 34139794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 39284933 - 39284980
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||||    
T  39284933 tcattgatagtggattggagagatcaatctctcccccagattaggtca 39284980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 36205820 - 36205689
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||  ||||| |||||||||||   || ||||||  || |||    
T  36205820 ggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttgaag--aactcattgacagcgga 36205723  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||| ||||||| |||  ||||||||||||    
T  36205722 ttggagagttcaatctatcctccagagtaggtca 36205689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 11067313 - 11067449
Alignment:
Q  69 attggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtag 167  Q
    ||||||||||||| ||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| ||||||||| || || | ||||  ||     
T  11067313 attggaaaaatgggtagaaattagtgttgtactttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-catttataa 11067411  T
Q  168 tggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||| ||||||||||||||||| |||| |||||||    
T  11067412 tggattgaagagatcaatctctcccccagattaggtca 11067449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 205
Target Start/End: Complemental strand, 11151739 - 11151615
Alignment:
Q  80 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 179  Q
    |||||||||||||||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | | | | |||||||||||||||    
T  11151739 ggtagaaattagatttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcactttgtaagaact-cttagatagtggattggagag 11151641  T
Q  180 atcaatctctcccacagagtaggtca 205  Q
    ||||| ||||||| |||| |||||||    
T  11151640 atcaacctctcccccagattaggtca 11151615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 33162570 - 33162440
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| ||||||||  |||| |||||| || || || | ||||| ||||||||| ||||||||||||||||||  ||| |||||||      
T  33162570 cttgttgaagctaatttcttgtaacccatttgtatctctctgtaagaact-cattgatagtggattagagagatcaatctctcccctagattaggtca-a 33162473  T
Q  208 gttgtaccgaactagataaacaattctttggtgt 241  Q
    |||| |||||||||| | ||||| ||||||||||    
T  33162472 gttggaccgaactaggtcaacaa-tctttggtgt 33162440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 42412117 - 42412161
Alignment:
Q  160 attggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||    
T  42412117 attgatagtggattggagagatcaatctctccc-cagagtaggtca 42412161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 14633889 - 14633849
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  14633889 tagtggattggagagatcaatctctcccccagattaggtca 14633849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 38312245 - 38312376
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||  |||||| ||||||||  |||| ||||||||| || |  | |||||     
T  38312245 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaacccatttgtatctctttgtaagatct-cattga 38312343  T
Q  165 tagtggattggagagatcaatctctcccacaga 197  Q
    |||||||||||||||||||||||||||| ||||    
T  38312344 tagtggattggagagatcaatctctcccccaga 38312376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 26353281 - 26353328
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||||||||||||| ||||||||  |||||||||||    
T  26353281 tcattgatagtggattggagagatcactctctcccttagagtaggtca 26353328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 36773610 - 36773698
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacaga 197  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | | ||| |||||||||||||||||||||||||||| ||||    
T  36773610 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-ctttgatagtggattggagagatcaatctctcccccaga 36773698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 42288230 - 42288135
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||||||||||||  |||| || |||||| ||  |  |||||| || ||||||||||||||||||||||||| |||| |||||||    
T  42288230 cttgttgaagctaatttattgtaacccatttgtatttctttgtaa-gagctcattgataatggattggagagatcaatctctccc-cagattaggtca 42288135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 34256669 - 34256531
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    ||||||||||||||||||||||||||  |||| |||   || ||||| ||||||||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  34256669 gagattggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 34256571  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||||||||   |||||||||||    
T  34256570 agtggattggagagatcaatctctcctctagagtaggtca 34256531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 7597647 - 7597781
Alignment:
Q  93 tttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctccc 192  Q
    ||||| |||| ||| |||||| ||| |||||| || ||| | ||||| ||||||||| ||  ||| ||||| ||||||||||||||||||||||||||||    
T  7597647 tttgttcttggagagcttgttgaagctaatttcttataatccttttgtatctctttgtaaagaatgcattgatagtggattggagagatcaatctctccc 7597746  T
Q  193 acagagtaggtcattgttgtaccgaactagataaa 227  Q
     || ||||||||||||||  |||||||| ||||||    
T  7597747 ccatagtaggtcattgttagaccgaactggataaa 7597781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 34254493 - 34254355
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    |||||||| |||| ||||||||||||  |||| |||   || ||||| ||||||||||| |||||||| ||||| ||||||||| || || || |||| |    
T  34254493 gagattgggaaaagggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctctttgtaagaactt-attgat 34254395  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||||||||   |||||||||||    
T  34254394 agtggattggagagatcaatctctcctctagagtaggtca 34254355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 17982667 - 17982797
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || ||||| ||||||||||| |||||||| ||||| ||||||||| || || | ||||| |||||||||    
T  17982667 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctctttggaagaact-cattgatagtggatt 17982765  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||  ||||||||||||    
T  17982766 ggagagttcaatctctcctccagagtaggtca 17982797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 32902292 - 32902191
Alignment:
Q  110 tgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgt 209  Q
    |||| ||| |||||| ||||||| |||||| ||||||||  ||  ||||||||| ||||| ||| |||||||||||||||||| | ||||||||||||||    
T  32902292 tgttgaagctaatttcttgtaacttttttgtatctctttctaaagaattcattgatagtgaatttgagagatcaatctctccccctgagtaggtcattgt 32902193  T
Q  210 tg 211  Q
    ||    
T  32902192 tg 32902191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 42435154 - 42435015
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  42435154 gagattggaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 42435056  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||| ||||||||||||  ||||||||||||    
T  42435055 tagtggattggagaaatcaatctctcctccagagtaggtca 42435015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 11712121 - 11712018
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| ||| |||| ||||  ||||||||| ||  || |||||| |||||||||| ||||||||||||||||| || |||||||||||    
T  11712121 cttgttgaagctaatttcttgaaacccttttatatctctttgtaaataactcattgatagtggattgaagagatcaatctctccctcaaagtaggtcatt 11712022  T
Q  208 gttg 211  Q
    ||||    
T  11712021 gttg 11712018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 31218271 - 31218401
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||||    
T  31218271 aaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttggaagaact-cattgatagtggatt 31218369  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
     ||||| |||||||||||  ||||||||||||    
T  31218370 agagagttcaatctctcctccagagtaggtca 31218401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 42498208 - 42498338
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || |||||| ||| |||||| |||||||| ||||| || |||||| || || | ||||| |||||||||    
T  42498208 aaaaaaggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatttctttgtaagaact-cattgatagtggatt 42498306  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||  ||||||||||||    
T  42498307 ggagagatcaatctctcctccagagtaggtca 42498338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 197
Target Start/End: Original strand, 5689244 - 5689407
Alignment:
Q  33 agtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaa 131  Q
    ||||||||  |||||||||||| || ||  || |||||||||||||||| |||||||||   | ||||||   || ||||| |||| |||||| ||||||    
T  5689244 agtgaaaatcattgagtgtcttgttcatt-aatgagattggaaaaatgggtagaaattaaggtggtgctttgtgagcttgtcaaagctaatttcttgtaa 5689342  T
Q  132 cctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacaga 197  Q
    ||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| ||||    
T  5689343 cccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccaga 5689407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 229
Target Start/End: Complemental strand, 29796457 - 29796320
Alignment:
Q  93 tttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg-aaacaaattcattggtagtggattggagagatcaatctctcc 191  Q
    ||||| |||| ||| |||||| ||| | |||| ||||||| |||||| | || |||| ||| ||| |||||  || ||||||||||||||||||||||||    
T  29796457 tttgttcttggagaacttgttgaagctgatttcttgtaacatttttgtacctatttgtaaaaaaactcatttataatggattggagagatcaatctctcc 29796358  T
Q  192 cacagagtaggtcattgttgtaccgaactagataaaca 229  Q
    | ||  |||||||||||||| |||||||| | ||||||    
T  29796357 cccaatgtaggtcattgttggaccgaacttggtaaaca 29796320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 40321128 - 40321224
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||| ||||||||  || | ||||||||| || ||| || ||| |||||||||||||||||||||||||||| |||| |||||||    
T  40321128 cttgttgaagttaatttcttgtaacccattagtatctctttgtaa-aaactctttgatagtggattggagagatcaatctctcccccagattaggtca 40321224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 1746372 - 1746243
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| |||||||||||   || |||||| |||||||||    
T  1746372 aaaaaaggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgaag--aactcattgatagtggatt 1746275  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||  || |||||||||    
T  1746274 ggagagttcaatctctcctccatagtaggtca 1746243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 15212791 - 15212930
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  15212791 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 15212889  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    || ||||||||||||||||||||||||| |||| |||||||    
T  15212890 taatggattggagagatcaatctctcccccagattaggtca 15212930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 30143346 - 30143476
Alignment:
Q  67 agattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    ||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |    
T  30143346 agattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgat 30143444  T
Q  166 agtggattggagagatcaatctctcccacaga 197  Q
    ||||||||||||||||||||||||||| ||||    
T  30143445 agtggattggagagatcaatctctcccccaga 30143476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 203
Target Start/End: Original strand, 40328784 - 40328922
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaac-ctttttgcatctctttgaaacaaattcattg 163  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||  |||||| ||||||| | ||||| ||||||||| || || | |||||    
T  40328784 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaaactaatttcttgtaactcattttgtatctctttgtaagaact-cattg 40328882  T
Q  164 gtagtggattggagagatcaatctctcccacagagtaggt 203  Q
     |||||||||||||||||||||||||||  ||||||||||    
T  40328883 atagtggattggagagatcaatctctcctccagagtaggt 40328922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 10930269 - 10930184
Alignment:
Q  159 cattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    ||||| |||||||||||||||||||||||||||| |||| |||||||  |||| |||||||| | | |||||||  |||||||||||    
T  10930269 cattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtcaacaatttcttggtgttgtt 10930184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 33352209 - 33352294
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  33352209 taatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccagattaggtca 33352294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 11137031 - 11137209
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg---aaacaaattcatt 162  Q
    |||||||  ||||||||||||||||  | ||| |||||||| |||||| ||| |||||| || ||||| ||||| |||||||||   ||| ||| |||||    
T  11137031 gagattgagaaaatggtagaaattaagtatgtccttgaagaacttgttgaagctaatttcttataaccgttttgtatctctttgtaaaaaaaaactcatt 11137130  T
Q  163 ggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact-agataaacaattctttggtgttgtt 245  Q
    | ||||| |||||||| ||     ||  || || ||||||||||||||| |||||||| || |||| ||||||||| |||||||    
T  11137131 gatagtgaattggagatat-----tcctcctcatagtaggtcattgttggaccgaactaaggtaaagaattctttgatgttgtt 11137209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 3303833 - 3303660
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| |||||||||  ||||| |||   || |||||| ||  |||||| |||||||   |||| ||||||||| || || | |||||     
T  3303833 gagattgggaaaatgggtagaaattaagtttgttctttgtgagcttgtttaacctaatttcttgtaactcatttgtatctctttgtaagaact-cattga 3303735  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgt 241  Q
    |||||||||| ||||||||||||||||| || |||||||||  |||| |||||||| | ||||||| ||||||||||    
T  3303734 tagtggattgaagagatcaatctctcccccacagtaggtca-agttggaccgaactgggtaaacaa-tctttggtgt 3303660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 9633652 - 9633592
Alignment:
Q  185 tctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    ||||| ||||| ||||||||||||||| ||||||||   ||||||||||||||||||||||    
T  9633652 tctcttccacatagtaggtcattgttggaccgaactgtgtaaacaattctttggtgttgtt 9633592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 27811283 - 27811422
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || ||   |||||     
T  27811283 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaacc-cattga 27811381  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||| ||||||||||||||||| |||| |||||||    
T  27811382 tagtggattgaagagatcaatctctcccccagattaggtca 27811422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 40221750 - 40221889
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||  |||||| ||||||||  |||| ||||||||| || || | | |||     
T  40221750 gagattggtaaaatgggtagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgtaagaact-cgttga 40221848  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  40221849 tagtggattggagagatcaatctctcccccagattaggtca 40221889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 4743285 - 4743238
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||||||||||||||||||| || |||||||||    
T  4743285 tcattgatagtggattggagagatcaatctctcccccaaagtaggtca 4743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 12702788 - 12702658
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || |||||| ||| |||||| |||||||| |||||  |||||||| || || | ||||| || ||||||    
T  12702788 aaaaagggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtgtctctttgtaagaact-cattgatattggatt 12702690  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||  ||| |||||||    
T  12702689 ggagagatcaatctctcccctagattaggtca 12702658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 1345480 - 1345395
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||  | || |||||||||||| || | ||||| |||||||||| |||| |||||||||||| ||||||||||||    
T  1345480 taatttcttgtaacccatatgtatctctttgaaagaact-cattgatagtggattgaagagttcaatctctcccccagagtaggtca 1345395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 4733800 - 4733850
Alignment:
Q  155 aattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||| |||||||||||||||||| ||||||||| |||| |||||||    
T  4733800 aattcattgatagtggattggagagatcgatctctcccccagattaggtca 4733850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 4283572 - 4283668
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||| ||   |||||||||||    
T  4283572 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctcccctctagagtaggtca 4283668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 18655448 - 18655544
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| ||||||||| |||||||||||||||||  || |||||||||    
T  18655448 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattagagagatcaatctctcctccaaagtaggtca 18655544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 44303903 - 44303999
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| |||| |||||| |||||| | ||||| ||||||||  || || | ||||| ||||||||||||||| |||||||||||  ||||||||||||    
T  44303903 cttgtcaaagctaatttcttgtaatccttttgtatctctttttaagaact-cattgatagtggattggagagttcaatctctcctccagagtaggtca 44303999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 2627833 - 2627880
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||    
T  2627833 tcattgatagtggattggagagttcaatctctcctccagagtaggtca 2627880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 8153855 - 8153902
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||| |||||||||||||||||||| || ||||||||||||    
T  8153855 tcattgatagttgattggagagatcaatctcttcctcagagtaggtca 8153902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 3772286 - 3772336
Alignment:
Q  155 aattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||| |||| ||||||||||||||||||||||| || | ||||||||||||    
T  3772286 aatttattgatagtggattggagagatcaatctatctctcagagtaggtca 3772336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 4731717 - 4731794
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacaga 197  Q
    |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||| ||||||||| ||||    
T  4731717 taatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcgatctctcccccaga 4731794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 19491862 - 19491698
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||  |||||| ||||||||  |||| ||||||||| ||  || || |||     
T  19491862 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gaactcgttga 19491764  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaat 231  Q
    |||||||||  |||||||||| |||||| || ||||||||| | ||| |||||||||| | ||||||    
T  19491763 tagtggattaaagagatcaatatctcccccatagtaggtca-tattggaccgaactaggtcaacaat 19491698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 19945480 - 19945383
Alignment:
Q  108 cttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| |||| |||||| ||||||||  ||||| ||||||||| || || | ||||| ||||||||||||||| |||||||||||   |||||||||||    
T  19945480 cttgtcaaagctaatttcttgtaaccacttttgtatctctttggaagaact-cattgatagtggattggagagttcaatctctcctcgagagtaggtca 19945383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 3073981 - 3073898
Alignment:
Q  120 aatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| ||||||| |||||| ||||||||| || || | ||||| || ||| ||||||||||||||||||||| || |||||||||    
T  3073981 aatttcttgtaacatttttgtatctctttgtaagaact-cattgataatggcttggagagatcaatctctccc-catagtaggtca 3073898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 205
Target Start/End: Original strand, 4162517 - 4162640
Alignment:
Q  80 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 179  Q
    ||||||| |||| ||||| |||  ||| |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||| ||| ||||||||||     
T  4162517 ggtagaagttaggtttgttctttgagaacttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattgatag-ggattggagat 4162614  T
Q  180 atcaatctctcccacagagtaggtca 205  Q
    |||||||||||||  |||||||||||    
T  4162615 atcaatctctccccaagagtaggtca 4162640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 18141868 - 18141964
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | | ||| ||||||||||||||||||||||||||||  ||| |||||||    
T  18141868 cttgttgaagctaatttcttgtaacccatttgtatcactttgtaagaact-ctttgatagtggattggagagatcaatctctcccctagattaggtca 18141964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 30291701 - 30291738
Alignment:
Q  155 aattcattggtagtggattggagagatcaatctctccc 192  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  30291701 aattctttgatagtggattggagagatcaatctctccc 30291738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 3439607 - 3439683
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaat-tctttggtg 240  Q
    |||||||||||||||  ||||||||||  ||||||||||||   ||| |||||||| ||| |||||| |||||||||    
T  3439607 tagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactggatgaacaatctctttggtg 3439683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 8965854 - 8965715
Alignment:
Q  66 gagattggaaaaatggtagaaatta-gatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| |||| ||||||||||| | ||||| ||| | ||  ||||| |||||||||| || ||||| ||||  ||||||||| ||  || ||||||     
T  8965854 gagattgggaaaaaggtagaaattagggtttgttctttatgagtttgttgaagttaatttcttataacccttttatatctctttgtaa-gaactcattga 8965756  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| || |||||||| |||||||||| || | |||||||    
T  8965755 tagtgcatcggagagataaatctctcccccatattaggtca 8965715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 41366734 - 41366651
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctccc 192  Q
    |||||| ||| |||||| || |||||| |||| ||| ||||| || || | ||||  ||||||||||||||||||||||||||||    
T  41366734 cttgtttaagctaatttcttttaacctatttgtatccctttgtaagaact-catttatagtggattggagagatcaatctctccc 41366651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 46173371 - 46173540
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    |||| |||||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || ||||||| |||||||||    
T  46173371 aaaattggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaa-ttcattgatagtggatt 46173469  T
Q  174 ggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    ||||||||||||||||||| |||| |||||||  |||| |||||||||||| |||||||  |||||||||||    
T  46173470 ggagagatcaatctctcccccagattaggtca-agttggaccgaactagatcaacaatttcttggtgttgtt 46173540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 247
Target Start/End: Original strand, 20937639 - 20937842
Alignment:
Q  43 attgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcat 142  Q
    ||||||| |||| || || ||| ||||| ||||||  |||||||||||  |||||  ||| ||| |||||| |||||||||| |||||||| ||||| ||    
T  20937639 attgagtctcttgttcatagaaagagatcggaaaataggtagaaattatgtttgtttttggagagcttgttgaagttaatttcttgtaacccttttgtat 20937738  T
Q  143 ctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgtt 242  Q
    ||||||||||  || |||||| || | |||||||||||||||||  |||| || |||| ||||| |||| || ||||||| ||||||||| ||| ||||     
T  20937739 ctctttgaaaagaactcattgata-tagattggagagatcaatcgttcccccaaagtatgtcatagttggacagaactaggtaaacaattattttgtgtg 20937837  T
Q  243 gttct 247  Q
    |||||    
T  20937838 gttct 20937842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 30236130 - 30236308
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||| |||| ||||||||| || || | |||||     
T  30236130 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgtaagaact-cattga 30236228  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||||||||||||||||||||||||||| |||| |||||||  |||| |||||||||| | |||||||  |||||||||||    
T  30236229 tagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactaggtcaacaatttcttggtgttgtt 30236308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 245
Target Start/End: Original strand, 46860494 - 46860657
Alignment:
Q  80 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 179  Q
    |||||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||    
T  46860494 ggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaataact-cattgatagtggattggagag 46860592  T
Q  180 atcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||||||| |||  |||||||||||||||||| |||||| | ||| ||| ||| ||||||||||||    
T  46860593 atcaatctttcctccagagtaggtcattgttggaccgaattggatgaac-attttttggtgttgtt 46860657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 45095169 - 45095307
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    |||||||| |||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  45095169 gagattgggaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 45095267  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||||||||   |||||||||||    
T  45095268 agtggattggagagatcaatctctcctctagagtaggtca 45095307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 55302079 - 55301981
Alignment:
Q  121 atttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 220  Q
    |||| ||||||||| |||| ||||||||| || || ||||||| |||||||||||||||||||||||||||  || ||||||||||||||| ||||||||    
T  55302079 atttcttgtaacctatttgtatctctttgtaagaa-ttcattgatagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaact 55301981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 235
Target Start/End: Complemental strand, 35138909 - 35138700
Alignment:
Q  25 cttgggaaagtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaattt 124  Q
    ||||||| ||||||||  |||||||||||| || |||||| |||||||  |||  |||||||||||  ||||| ||||  ||  ||||| ||||||||||    
T  35138909 cttgggagagtgaaaatcattgagtgtcttgttcatggaaagagattgagaaatgggtagaaattatgtttgttcttggtgagtttgttgaagttaattt 35138810  T
Q  125 attgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagat 224  Q
     ||| |||  ||||| ||||||||| ||  || |||||| |||||||| | ||||| ||||||| |||| | ||||||||||||||| ||||||   |||    
T  35138809 cttgcaactcttttgtatctctttgtaaagaactcattgatagtggatggaagagaacaatctccccca-aaagtaggtcattgttgaaccgaatcggat 35138711  T
Q  225 aaacaattctt 235  Q
    ||||| |||||    
T  35138710 aaacatttctt 35138700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 220
Target Start/End: Complemental strand, 4055926 - 4055773
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| |||  |||||||||||| || || |||| ||| ||||| ||||||||||| ||||||||| ||||| ||||||||| || ||| ||||||     
T  4055926 gagattgggaaatgggtagaaattaggtt-gttcttggagaacttgtaaaagttaatttcttgtaacctcttttgtatctctttgtaagaaactcattga 4055828  T
Q  165 tagtggattggagagatcaatctctcccacaga-gtaggtcattgttgtaccgaact 220  Q
    |||||||||| |||||||  |||||||| |||| ||||||||||||||  |||||||    
T  4055827 tagtggattgaagagatc--tctctcccccagatgtaggtcattgttgggccgaact 4055773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 220
Target Start/End: Original strand, 29813068 - 29813221
Alignment:
Q  66 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||| ||||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||||||||||||| || || | ||||      
T  29813068 gagattggaaaaataggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgcatctctttgtaagaact-cattta 29813166  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 220  Q
    |||||||||||||||||||||||||||| |||| | ||||| ||||| ||||||||    
T  29813167 tagtggattggagagatcaatctctcccccagatttggtca-tgttggaccgaact 29813221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 247
Target Start/End: Complemental strand, 26323255 - 26323053
Alignment:
Q  47 agtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctct 146  Q
    |||||||| || |||| | |||||||  |||| |||| ||||||| |||||  |||||||  ||||| ||| |||||| |||||||||||||| || |||    
T  26323255 agtgtcttgttcatgggatgagattgagaaaagggtaaaaattaggtttgtttttgaagagtttgttgaagctaatttcttgtaacctttttgtatatct 26323156  T
Q  147 ttgaaacaaattcattggtagtggattggagagatca-atctctcccac-agagtaggtcattgttgtaccgaactagataaacaattctttggtgttgt 244  Q
    | | || ||| |||||| ||||| | |||||| |||  || | |||| | ||||||||||||||||| |||||| | | ||||||||||||||||||| |    
T  26323155 tggtaaaaaactcattgatagtgaagtggagatatcttatttatccccctagagtaggtcattgttggaccgaagtgggtaaacaattctttggtgttat 26323056  T
Q  245 tct 247  Q
    |||    
T  26323055 tct 26323053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 205
Target Start/End: Original strand, 7762238 - 7762409
Alignment:
Q  33 agtgaaaagtattgagtgtcttatttatggaaggagattg-gaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaa 131  Q
    ||||||||  ||||||||||||||| || |  | |||||| |||||| ||||||||||||  |||| |||   || |||||| ||| |||||| ||||||    
T  7762238 agtgaaaatcattgagtgtcttattcattggtg-agattgagaaaaagggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaa 7762336  T
Q  132 cctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  7762337 ctcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 7762409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 23200294 - 23200162
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||||||||||||||||| |||| |||   || ||||| |||| |||||| |||||||| ||||| |||| |||| ||  || |||||| ||||| |    
T  23200294 ggaaaaatggtagaaattagagttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctttttgtaa-gaactcattgatagtgaa 23200196  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||| |||||||||||  ||||||||||||    
T  23200195 ttggagagttcaatctctcctccagagtaggtca 23200162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 37408470 - 37408602
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||    
T  37408470 ggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgatagtgga 37408568  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    ||| ||||||||||||||||  ||||||||||||    
T  37408569 ttgaagagatcaatctctcctccagagtaggtca 37408602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 40735431 - 40735527
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||||||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  40735431 cttgttgaagctaatttattgtaaccagtttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccagattaggtca 40735527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 19684052 - 19683913
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | |||||     
T  19684052 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattga 19683954  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  || |||||||||    
T  19683953 tagtggattggagagatcaatctctcctccatagtaggtca 19683913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 29810889 - 29811012
Alignment:
Q  81 gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagaga 180  Q
    |||||||||||| |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| ||||||||||||||||    
T  29810889 gtagaaattagagttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagaga 29810987  T
Q  181 tcaatctctcccacagagtaggtca 205  Q
    |||||||||||| |||| |||||||    
T  29810988 tcaatctctcccccagattaggtca 29811012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 6095712 - 6095623
Alignment:
Q  115 aagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  6095712 aagttaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 6095623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 7764479 - 7764608
Alignment:
Q  75 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattg 174  Q
    |||| ||||||||||||  |||| |||   || |||||||||| |||||| |||||||  ||||| ||||||||| || || | ||||| ||||||||||    
T  7764479 aaaagggtagaaattagggttgttctttgtgaacttgttaaagctaatttcttgtaactcttttgtatctctttgtaagaact-cattgatagtggattg 7764577  T
Q  175 gagagatcaatctctcccacagagtaggtca 205  Q
    ||||||| |||||||||  ||||||||||||    
T  7764578 gagagatgaatctctcctccagagtaggtca 7764608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 23198095 - 23197963
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||||||||||||||||| ||||  ||   || ||||| |||| |||||| |||||||| ||||| |||| |||| || || | ||||| ||||| |    
T  23198095 ggaaaaatggtagaaattagagttgttttttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctttttgtaagaact-cattgatagtgaa 23197997  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||| |||||||||||  ||||||||||||    
T  23197996 ttggagagttcaatctctcctccagagtaggtca 23197963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 54593752 - 54593848
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||||||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||| ||||    
T  54593752 cttgttgaagctaatttattgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtatgtca 54593848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 760852 - 760991
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| |||||||||| | ||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | |||||     
T  760852 gagattgggaaaatgggtagaaattaggtctgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaagaact-cattga 760950  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  760951 tagtggattggagagatcaatctctcccccagattaggtca 760991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 34491217 - 34491356
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  34491217 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattga 34491315  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  34491316 tagtggattggagagatcaatctctcctccagagtaggtca 34491356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 4075592 - 4075480
Alignment:
Q  108 cttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacaga-gtaggtca 205  Q
    ||||| ||||||||||| ||||||||| ||||| ||| ||||| || ||| || ||| |||||||||||||||||||  ||||||| |||| ||||||||    
T  4075592 cttgtaaaagttaatttcttgtaacctcttttgtatcactttgtaagaaactctttgatagtggattggagagatca--ctctcccccagatgtaggtca 4075495  T
Q  206 ttgttgtaccgaact 220  Q
    ||||||  |||||||    
T  4075494 ttgttgggccgaact 4075480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 5258298 - 5258168
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||||    
T  5258298 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttggaagaact-cattgatagtggatt 5258200  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||| |  ||||||||||||    
T  5258199 ggagagttcaatctcttctccagagtaggtca 5258168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 22835165 - 22835040
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | |||||     
T  22835165 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaagaact-cattga 22835067  T
Q  165 tagtggattggagagatcaatctctcc 191  Q
    |||||||||||||||||||||||||||    
T  22835066 tagtggattggagagatcaatctctcc 22835040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 43403815 - 43403753
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 220  Q
    |||||| ||||||||||||||||| |||||||||  ||||||||||||| |||| ||||||||    
T  43403815 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaact 43403753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 49199590 - 49199453
Alignment:
Q  108 cttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcat 206  Q
    |||||| ||| |||||| ||||||||  ||||| ||||||||| || || | ||||| ||||||||||||||||| |||||||||  |||| ||||||||    
T  49199590 cttgttgaagctaatttcttgtaacccattttgtatctctttgtaagaact-cattgatagtggattggagagattaatctctcctccagactaggtcat 49199492  T
Q  207 tgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
     |||| |||||||| | | ||||||   |||||||||||    
T  49199491 ggttggaccgaactgggtgaacaatctcttggtgttgtt 49199453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 53921666 - 53921498
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| |||||||||| |||||  ||   || |||||||||| |||||| |||||||   |||| |||  |||| || || | |||||     
T  53921666 gagattggaaaaatgggtagaaattaggtttgttgtttgtgagcttgttaaagctaatttcttgtaactcatttgtatcattttgtaagaact-cattga 53921568  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctt 235  Q
    |||||||||||||||||||||||||||| | |||||| |||  |||  |||||||| |||||||| |||||    
T  53921567 tagtggattggagagatcaatctctcccccggagtagatca-agtttgaccgaactggataaacatttctt 53921498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 205
Target Start/End: Original strand, 9581302 - 9581426
Alignment:
Q  80 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 179  Q
    |||||||||||| ||||| |||   || |||||| ||| |||||| || |||||  |||| ||| ||||| || || | ||||| |||||||||||||||    
T  9581302 ggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttttaacccatttgtatccctttgtaagaact-cattgatagtggattggagag 9581400  T
Q  180 atcaatctctcccacagagtaggtca 205  Q
    ||||||||||||  ||||||||||||    
T  9581401 atcaatctctcctccagagtaggtca 9581426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 16499126 - 16499171
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggt 203  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||    
T  16499126 tcattgatagtggattggagagatcaatctctcccccagagtaggt 16499171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 245
Target Start/End: Complemental strand, 43401965 - 43401785
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaac-ctttttgcatctctttgaaacaaattcattg 163  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||| | ||||  ||||||||| || || | |||||    
T  43401965 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacgcattttttatctctttgtaagaact-cattg 43401867  T
Q  164 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
     |||||||||||||| || |||||||||  ||||||||||||| |||| |||||||| | | ||||||   |||||||||||    
T  43401866 atagtggattggagaaattaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatctcttggtgttgtt 43401785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 44331593 - 44331689
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| |||||| |  |||| ||||||||| || || || |||| |||||||||||||||||||||||||||| |||| |||||||    
T  44331593 cttgttgaagctaatttcttgtaagccatttgtatctctttgtaagaactt-attgatagtggattggagagatcaatctctcccccagattaggtca 44331689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 205
Target Start/End: Original strand, 51398787 - 51398958
Alignment:
Q  33 agtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaa 131  Q
    ||||||||  |||||||||||| || || || | ||||||||||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||    
T  51398787 agtgaaaatcattgagtgtcttgttcattgatg-agattggaaaaatgggtagaaattagggttgttcttagtgaacttgttgaagctaatttcttgtaa 51398885  T
Q  132 cctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |   |||| ||||||||| || || | ||||| |||||||||||||||||  ||||||||| |||| |||||||    
T  51398886 ctcatttgtatctctttgtaagaact-cattgatagtggattggagagatttatctctcccccagattaggtca 51398958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 5260477 - 5260363
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||||    
T  5260477 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttggaagaact-cattgatagtggatt 5260379  T
Q  174 ggagagatcaatctct 189  Q
    |||||| |||||||||    
T  5260378 ggagagttcaatctct 5260363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 32891152 - 32891277
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | | ||| ||||||||||||||||| |||||||||| | |||||||||| |    
T  32891152 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cgttgatagtggattggagagataaatctctcccccggagtaggtca-t 32891249  T
Q  208 gttgtaccgaactagataaacaattctt 235  Q
    |||| |||||||| ||||| || |||||    
T  32891250 gttggaccgaactggataatcatttctt 32891277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 41819587 - 41819532
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 220  Q
    |||||||||||||| ||||||||||||  |||||||||||||||||| ||| ||||    
T  41819587 tagtggattggagacatcaatctctcctccagagtaggtcattgttggaccaaact 41819532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 44700597 - 44700515
Alignment:
Q  109 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctccc 192  Q
    ||||| ||| |||||| ||||||||| |||| ||||||||| || || | | ||| ||||||||||||||||||||||||||||    
T  44700597 ttgttgaagctaatttcttgtaacctatttgtatctctttgtaagaact-ctttgatagtggattggagagatcaatctctccc 44700515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 29196506 - 29196410
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| |||| |||||| ||| ||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||    
T  29196506 cttgtcaaagctaatttcttggaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccaaattaggtca 29196410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 40913397 - 40913437
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  40913397 tagtggattggagagatcaatctctcccccagattaggtca 40913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 5433944 - 5433901
Alignment:
Q  167 gtggattggagagatcaatctctcccacagagtaggtcattgtt 210  Q
    |||||||||||||||||||||||||  || ||||||||||||||    
T  5433944 gtggattggagagatcaatctctcctccatagtaggtcattgtt 5433901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 7780075 - 7780028
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||    
T  7780075 tcattgatagtggattggagagttcaatctctcctccagagtaggtca 7780028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 29682364 - 29682490
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| |||||||||  ||||| |||   || |||||| ||| |||||| |||| |||  |||| ||| ||||| || || | |||||     
T  29682364 gagattgggaaaatgggtagaaattatgtttgttctttgtgagcttgtttaagctaatttcttgtcacccatttgtatccctttgtaagaact-cattga 29682462  T
Q  165 tagtggattggagagatcaatctctccc 192  Q
    ||||||||||||||||||||||||||||    
T  29682463 tagtggattggagagatcaatctctccc 29682490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 39153432 - 39153385
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||||||| ||||||||||| |||| |||||||    
T  39153432 tcattgatagtggattggagagaacaatctctcccccagattaggtca 39153385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 40734595 - 40734642
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||||||||||||||||||| || | |||||||    
T  40734595 tcattgatagtggattggagagatcaatctctcccccaaattaggtca 40734642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 47304348 - 47304395
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||||||||||||||||||||||  ||| |||||||    
T  47304348 tcattgatagtggattggagagatcaatctctccccaagattaggtca 47304395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 9636235 - 9636150
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||| ||||| |||| |||| || || | ||||| ||||||||||||||| |||||||||||  || |||||||||    
T  9636235 taatttcttgtaacccttttgtatctttttgtaagaact-cattgatagtggattggagagttcaatctctcctccaaagtaggtca 9636150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 2075144 - 2075099
Alignment:
Q  160 attggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||| ||||||||| ||||||||||||||||||  |||||||||||    
T  2075144 attgatagtggatttgagagatcaatctctccccgagagtaggtca 2075099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 4570049 - 4570094
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggt 203  Q
    |||||| ||||||||||||||||||||||||| |  ||||||||||    
T  4570049 tcattgatagtggattggagagatcaatctctactccagagtaggt 4570094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 33191928 - 33191980
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttg 211  Q
    |||||| ||||||||| |||||||||||||||| | ||||| ||||||||||||    
T  33191928 tcattgatagtggattagagagatcaatctctctc-cagaggaggtcattgttg 33191980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 5236619 - 5236481
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  5236619 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 5236521  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    || |||||| ||||||||||||| |||| |||| |||||||    
T  5236520 taatggattcgagagatcaatctttccc-cagattaggtca 5236481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 8166604 - 8166536
Alignment:
Q  81 gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg 149  Q
    ||||||||||| ||||| |||| |||  ||||| |||||||| | || ||||||||||| |||||||||    
T  8166604 gtagaaattaggtttgttcttggagagtttgttgaagttaatatcttataacctttttgtatctctttg 8166536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 27305774 - 27305734
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  || |||||||||    
T  27305774 tagtggattggagagatcaatctctcctccaaagtaggtca 27305734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 31314490 - 31314589
Alignment:
Q  105 gatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtc 204  Q
    ||||||||| ||| |||||| ||||||||  |||| |||| |||| || || | | ||| ||||||||||||||||||||| |||||| || | ||||||    
T  31314490 gatcttgttgaagctaatttcttgtaacccatttgtatctttttgtaagaact-ctttgatagtggattggagagatcaatatctcccccatattaggtc 31314588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 27577 - 27442
Alignment:
Q  94 ttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctccca 193  Q
    |||| |||||||| |||||| ||| |||||| |||||||   |||| ||||||||| ||  || | |||| ||||||||||||||||||||||||||||     
T  27577 ttgttcttgaagagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaaataacttattgatagtggattggagagatcaatctctcccc 27478  T
Q  194 cagagtaggtcattgttgtaccgaactagataaaca 229  Q
    || ||||||||||||||| |||||| ||| ||||||    
T  27477 catagtaggtcattgttggaccgaattaggtaaaca 27442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 5406362 - 5406224
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    |||||||| |||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  5406362 gagattgggaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 5406264  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  5406263 agtggattggagagatcaatctctcctccagagtaggtca 5406224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 5410687 - 5410549
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    |||||||| |||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  5410687 gagattgggaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 5410589  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  5410588 agtggattggagagatcaatctctcctccagagtaggtca 5410549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 190
Target Start/End: Original strand, 25073551 - 25073698
Alignment:
Q  43 attgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcat 142  Q
    ||||||| |||| || |||| ||||||||| |||||||||||||||||||||| | |||   || |||||||||| || |||||||||||| ||||| ||    
T  25073551 attgagtatcttgttcatgggaggagattgaaaaaatggtagaaattagatttattcttcgtgagcttgttaaagctattttattgtaacccttttgtat 25073650  T
Q  143 ctctttgaaacaaattcattggtagtggattggagagatcaatctctc 190  Q
    |||| || ||  || |||||| ||||||||| |||| |||||||||||    
T  25073651 ctctatgtaaagaactcattgatagtggattagagaaatcaatctctc 25073698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 31404837 - 31404702
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    |||||||| |||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  31404837 gagattgggaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 31404739  T
Q  166 agtggattggagagatcaatctctcccacagagtagg 202  Q
    ||||||||||||||||||||||||||  |||||||||    
T  31404738 agtggattggagagatcaatctctcctccagagtagg 31404702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 5413556 - 5413418
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    |||||||| |||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  5413556 gagattgggaaaaaggtagaaattagggttgttctttgcgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 5413458  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  5413457 agtggattggagagatcaatctctcctccagagtaggtca 5413418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 26800691 - 26800770
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| |||||||| ||| |||| ||| |||||||||||    
T  26800691 tagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaacatttc-ttggtgttgtt 26800770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 203
Target Start/End: Original strand, 4045396 - 4045566
Alignment:
Q  33 agtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatggtagaaattaga-tttgtgcttgaagatcttgttaaagttaatttattgtaa 131  Q
    ||||||||  |||||||||||| ||||| | || ||||||| |||||||||||||||||  ||||| ||| | || |||||| ||| |||||| ||||||    
T  4045396 agtgaaaatcattgagtgtcttgtttattggag-agattgggaaaatggtagaaattagggtttgttctttatgagcttgttgaagctaatttcttgtaa 4045494  T
Q  132 cctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggt 203  Q
     | ||||  ||||||||| ||  || |||||| ||||||||||||||||||||| ||| || || |||||||    
T  4045495 tcattttatatctctttgtaaataactcattgatagtggattggagagatcaatttctaccccaaagtaggt 4045566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 245
Target Start/End: Complemental strand, 22424990 - 22424811
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacc--tttttgcatctctttgaaacaaattcatt 162  Q
    |||||||||||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||||| ||||||||| || || | ||||    
T  22424990 gagattggaaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttttgtatctctttgtaagaact-catt 22424892  T
Q  163 ggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
      |||||||||||||||||||||||||||  |||||||||||||||||| |||| ||| | | |||| ||| |||||||||||    
T  22424891 a-tagtggattggagagatcaatctctccttcagagtaggtcattgttggaccgtactgggtgaacatttc-ttggtgttgtt 22424811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 2973102 - 2972963
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  2973102 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 2973004  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  2973003 tagtggattggagagatcaatctctcctcaagagtaggtca 2972963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 245
Target Start/End: Original strand, 5043648 - 5043810
Alignment:
Q  81 gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagaga 180  Q
    ||||||||||| ||||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||| |||| |||||||||||    
T  5043648 gtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattgatagtagattggagaga 5043746  T
Q  181 tcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||||||||||  || ||||||||||||||| |||||||| | | |||| ||| |||||||||||    
T  5043747 tcaatctctcctccatagtaggtcattgttggaccgaactgggtgaacatttc-ttggtgttgtt 5043810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 21588936 - 21589075
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  21588936 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 21589034  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  21589035 tagtggattggagagatcaatctctcctccagagtaggtca 21589075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 21593669 - 21593808
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  21593669 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 21593767  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  21593768 tagtggattggagagatcaatctctcctccagagtaggtca 21593808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 26830286 - 26830147
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| ||||||||||| |||| |||   || |||||| ||| |||||| |||||| |  |||| ||||||||| || || | |||||     
T  26830286 gagattggaaaaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaatccatttgtatctctttgtaagaact-cattga 26830188  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  || |||||||||    
T  26830187 tagtggattggagagatcaatctctcctccaaagtaggtca 26830147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 3808872 - 3808706
Alignment:
Q  66 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattg 163  Q
    |||||||| ||||| ||||||||||||  |||| |||   || |||||| ||  |||||| ||||||||  ||||| ||||||||| || || | |||||    
T  3808872 gagattgggaaaataggtagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccattttgtatctctttgtaagaact-cattg 3808774  T
Q  164 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaat 231  Q
     |||||||||||||||||||||||||||  |||||||||||||  ||| |||||||||| | ||||||    
T  3808773 atagtggattggagagatcaatctctcctccagagtaggtcatgattggaccgaactaggtgaacaat 3808706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 30834690 - 30834560
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||||    
T  30834690 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttggaagaact-cattgatagtggatt 30834592  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||  ||||||||||||    
T  30834591 ggagagttcaatctctcctccagagtaggtca 30834560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 2171687 - 2171556
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||| | ||||||||| || || | ||||| |||||||    
T  2171687 ggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttt-gtatctctttgtaagaact-cattgatagtgga 2171590  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||| |||||||||||  ||||||||||||    
T  2171589 ttggagagttcaatctctcctccagagtaggtca 2171556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 28137528 - 28137432
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| || |||||| || || | ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  28137528 cttgtttaagctaatttcttgtaacccatttgtatttctttgtaagaact-cattgatagtggattggagagatcaatctctcccccagagtaggtca 28137432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 26954357 - 26954277
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtg 240  Q
    |||||| |||||||||||||||||||||||||||| || |||||||||  |||| |||||||||| | ||||| |||||||||    
T  26954357 tcattgatagtggattggagagatcaatctctcccccaaagtaggtca-agttggaccgaactaggtcaacaa-tctttggtg 26954277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 33160506 - 33160381
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||| |||| |||   || ||||| |||| |||||| |||||||  ||||| ||||||||| || || | ||||| | |||||||    
T  33160506 aaaaaaggtagaaattagagttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttgtaagaact-cattgatggtggatt 33160408  T
Q  174 ggagagatcaatctctcccacagagta 200  Q
    ||||||||||||||||||  |||||||    
T  33160407 ggagagatcaatctctcctccagagta 33160381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 17758028 - 17758206
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  17758028 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 17758126  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||||||||||||||||||||||| ||   ||||||| |||   ||| |||||||||| | |||| ||| |||||||||||    
T  17758127 tagtggattggagagatcaatctcccctctagagtagttcaagtttggaccgaactaggtgaacatttc-ttggtgttgtt 17758206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 5409140 - 5409093
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||    
T  5409140 tcattgatagtggattggagagatcaatctctcctccagagtaggtca 5409093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 16452483 - 16452353
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| |||   ||||||||| || || | ||||| |||||||||    
T  16452483 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctttcatatctctttggaagaact-cattgatagtggatt 16452385  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||  ||||||||||||    
T  16452384 ggagagttcaatctctcctccagagtaggtca 16452353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 9183150 - 9183069
Alignment:
Q  109 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcc 191  Q
    ||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||    
T  9183150 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcc 9183069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 33211246 - 33211209
Alignment:
Q  168 tggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  33211246 tggattggagagatcaatctctcccccagagtaggtca 33211209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 6097522 - 6097438
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaat-tctttggtgt 241  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||   ||| |||||||| | | |||||| ||||||||||    
T  6097522 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgt 6097438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 16569119 - 16569166
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||||||||||||||||||  |||| |||||||    
T  16569119 tcattgatagtggattggagagatcaatctctcctccagattaggtca 16569166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 17763087 - 17763173
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||||| ||||||||||||| |||||||||||||  |||||||| |||   ||| |||||||||| | |||| ||| |||||||||||    
T  17763087 tcattgatagtggattggagtgatcaatctctcctccagagtagatcaagtttggaccgaactaggtgaacatttc-ttggtgttgtt 17763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 603208 - 603112
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | ||| |||||||||||||| |||||||||||||  ||| |||||||    
T  603208 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cgttgatagtggattggagaaatcaatctctccccaagattaggtca 603112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 412199 - 412283
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaat-tctttggtgt 241  Q
    |||||| ||||||||| ||||| |||||||||||  ||||||||||||   ||| |||||||| | | |||||| ||||||||||    
T  412199 tcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgt 412283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 3038967 - 3038927
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||| |||||||||| |||| |||||||    
T  3038967 tagtggattggagagattaatctctcccccagattaggtca 3038927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 4253689 - 4253523
Alignment:
Q  69 attggaaaaatggtagaaattaga-tttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtag 167  Q
    ||||| |||||||||||||||||  ||||| |||   || |||||| ||| ||||||  ||||||| ||||  ||||||||| ||  || |||||| ||     
T  4253689 attggtaaaatggtagaaattagggtttgttctttgtgagcttgttgaagctaatttcatgtaacccttttatatctctttggaaagaactcattgataa 4253590  T
Q  168 tggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctt 235  Q
    |||||| ||||||||||||||||||||||||||||||| | ||| |||||||||| |||||| |||||    
T  4253589 tggattagagagatcaatctctcccacagagtaggtcaat-ttggaccgaactaggtaaacatttctt 4253523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 192
Target Start/End: Original strand, 5116587 - 5116736
Alignment:
Q  43 attgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcat 142  Q
    ||||||| |||| ||||||| |||||||| | ||||  ||||||||||| ||||| |||| | |  ||||| ||| ||||||||||||| | ||||| ||    
T  5116587 attgagtctcttgtttatgggaggagattaggaaaagagtagaaattaggtttgttcttggatagtttgttgaagataatttattgtaaaccttttgtat 5116686  T
Q  143 ctctttgaaacaaattcattggtagtggattggagagatcaatctctccc 192  Q
    ||||||| ||  || |||||| ||||| ||||||||||| ||||||||||    
T  5116687 ctctttgtaaagaactcattgatagtgaattggagagataaatctctccc 5116736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 22328511 - 22328375
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| |||||||  ||||| ||||||||| ||  || |||||  ||||||||| ||||||||||||||||||  |||||||||||||    
T  22328511 cttgttgaagctaatttcttgtaactcttttgtatctctttgcaaggaagtcattaatagtggatttgagagatcaatctctcccctagagtaggtcatt 22328412  T
Q  208 gttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||| |||||||| | ||||  ||| ||||||||||||    
T  22328411 gttggaccgaactgggtaaa-tattttttggtgttgtt 22328375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 48491584 - 48491723
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| |||||||||||| || | |||||     
T  48491584 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgaaagaact-cattga 48491682  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  48491683 tagtggattggagagatcaatctctcccccagattaggtca 48491723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 220
Target Start/End: Complemental strand, 3904780 - 3904626
Alignment:
Q  66 gagattggaaaaatggtagaaattagattt-gtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||||||||||||| ||| || |||  ||| | | || ||  |||||| |||||||  ||||||||||||||| ||  || ||||||     
T  3904780 gagattgggaaaatggtagaaattaggttttgttctttgagagcctattgaatgtaatttcttgtaacacttttgcatctctttgtaaagaactcattga 3904681  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 220  Q
    ||||| ||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  3904680 tagtg-atcagagagatcaatctctccctcagagtaggtcattgttggaccgaact 3904626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 8359387 - 8359301
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||| |||||||| | | |||| ||| |||||||||||    
T  8359387 tcattgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttc-ttggtgttgtt 8359301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 35853926 - 35854058
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||    
T  35853926 ggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgatagtgga 35854024  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||| |||||||||||  ||||||||||||    
T  35854025 ttggagagttcaatctctcctccagagtaggtca 35854058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 48489436 - 48489609
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||  | | |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||      
T  48489436 gagattgggaaaatgggtagaaattagggttgttctttgaaaacttgttgaagctaatttcttgtaacccatttgtatctctttgcaataact-cattca 48489534  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgt 241  Q
    |||||||||||||||||||||||||||| |||| |||||||  |||| |||||||| | ||||||| ||||||||||    
T  48489535 tagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactgggtaaacaa-tctttggtgt 48489609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 23555054 - 23555184
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||||||||||||||||  |||| |||   || |||||| ||| |||||| |||||||  ||||| | ||||||| || || | ||||| |||||||||    
T  23555054 aaaaatggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacacttttgtacctctttgtaagaact-cattgatagtggatt 23555152  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||  ||||||||||||    
T  23555153 ggagagatcaatctctcctccagagtaggtca 23555184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 3259043 - 3259139
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| ||||||||||||||   |||| ||||||||| || |||  ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  3259043 cttgtttaagctaatttattgtaactcatttgtatctctttgtaa-aaacccattgatagtggattggagagatcaatctctcctccagagtaggtca 3259139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 14069989 - 14069857
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||    
T  14069989 ggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtgga 14069891  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||  ||| |||||||    
T  14069890 ttggagagatcaatctctccccaagattaggtca 14069857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 14380017 - 14379885
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||    
T  14380017 ggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtgga 14379919  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||  ||| |||||||    
T  14379918 ttggagagatcaatctctcccctagattaggtca 14379885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 29991101 - 29991197
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| |||| |||||| |||||||| ||||| ||||||||  || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  29991101 cttgtcaaagctaatttcttgtaacccttttgtatctctttctaataact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 29991197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 32358174 - 32358078
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  32358174 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 32358078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 18126649 - 18126788
Alignment:
Q  66 gagattggaaaaatg-gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    ||||||||||||||| |||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  18126649 gagattggaaaaatgtgtagaaattagggttgttctttgtgaacttgttcaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 18126747  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||  ||||||||||||| |||| |||||||    
T  18126748 tagtggattggaggaatcaatctctcccccagactaggtca 18126788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 22269978 - 22270117
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || |  ||||     
T  22269978 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaactg-attga 22270076  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  22270077 tagtggattggagagatcaatctctcctccagagtaggtca 22270117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 27347822 - 27347961
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  27347822 gagattgggaaaatgggtagaaattaggattgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 27347920  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||| ||||||||||||||||| |||| |||||||    
T  27347921 tagtggattgcagagatcaatctctcccccagattaggtca 27347961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 6431977 - 6432115
Alignment:
Q  67 agattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    ||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | ||| |    
T  6431977 agattgggaaaatgggtagaaattaggattgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cgttgat 6432075  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  6432076 agtggattggagagatcaatctctccttcagagtaggtca 6432115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 235
Target Start/End: Original strand, 26639303 - 26639499
Alignment:
Q  43 attgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcat 142  Q
    ||||||| |||| ||| ||| | |||||||  ||||||||||||||||| | ||| |||| |||  ||||| | |||||||| |||||||| ||||| ||    
T  26639303 attgagtctcttctttttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgtat 26639402  T
Q  143 ctct----ttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctt 235  Q
     | |    ||| ||  || || ||| || |||||| |||||||||||||||||  || |||| ||||||||||||||||||| | |||| |||||||    
T  26639403 atatatcattgtaaataactctttgataatggattagagagatcaatctctcctccatagtatgtcattgttgtaccgaactggctaaaaaattctt 26639499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 30024852 - 30024731
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | ||| |||||||||||||||||||||| ||||| ||||||||||||      
T  30024852 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-ctttgatagtggattggagagatcaatcactcccccagagtaggtca-a 30024755  T
Q  208 gttgtaccgaactagataaacaat 231  Q
    |||| |||||||| ||| ||||||    
T  30024754 gttggaccgaactggatcaacaat 30024731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 245
Target Start/End: Complemental strand, 34310787 - 34310701
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgttgtt 245  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||   ||| |||||||| | | ||||| ||||||||||||||    
T  34310787 tcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaa-tctttggtgttgtt 34310701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 19502226 - 19502322
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||| |||| |||||| |||||||  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||| ||||    
T  19502226 cttgtcaaagctaatttcttgtaactcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaagtca 19502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 41317590 - 41317458
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    |||||| |||||||||||||  |||| |||   || ||||| |||| |||||| |||||| |  |||| ||| ||||| || || | ||||| |||||||    
T  41317590 ggaaaattggtagaaattagggttgttctttgtgagcttgtcaaagctaatttcttgtaatccatttgtatccctttgtaagaact-cattgatagtgga 41317492  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||||||||| |||| |||||||    
T  41317491 ttggagagatcaatctctcccccagattaggtca 41317458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 205
Target Start/End: Original strand, 8153391 - 8153486
Alignment:
Q  109 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||| |||| |||||| |||||||   |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  8153391 ttgtcaaagctaatttcttgtaactcatttgtatctctttgtaataact-cattgatagtggattggagagatcaatctctcccccagattaggtca 8153486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 41649173 - 41649035
Alignment:
Q  66 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||| |||||||||||| ||||| |||   || ||||||  || |||||| ||||||||  |||| ||| ||||| ||  || ||||||     
T  41649173 gagattggaaaaattggtagaaattaggtttgttctttgtgagcttgtt-tagctaatttcttgtaacccatttgtatccctttgtaa-gaactcattga 41649076  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||||| || | |||||||    
T  41649075 tagtggattggagagatcaatctctcccccaaattaggtca 41649035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 43864249 - 43864388
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||| ||| ||||||||||  |||| |||   || |||||| ||| ||||||  |||||||  |||| ||||||||| || ||| | ||||     
T  43864249 gagattggaaaagtgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcctgtaacccatttgtatctctttgtaa-aaactaattga 43864347  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||||||||||||||| | |||| |||||||    
T  43864348 tagtggattggagagatcaatctctctcccagattaggtca 43864388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 47674063 - 47673980
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctccc 192  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| ||||||||||||||||||||||||||||    
T  47674063 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctccc 47673980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 4586166 - 4586292
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||  ||||||||| || || | |||||     
T  4586166 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaattttttgtaacccatttttatctctttgtaagaact-cattga 4586264  T
Q  165 tagtggattggagagatcaatctctccc 192  Q
    ||||||||||||||||||||||||||||    
T  4586265 tagtggattggagagatcaatctctccc 4586292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 26417321 - 26417447
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | |||     
T  26417321 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagataatttcttgtaacccatttgtatctctttgtaagaact-cgttga 26417419  T
Q  165 tagtggattggagagatcaatctctccc 192  Q
    ||||||||||||||||||||||||||||    
T  26417420 tagtggattggagagatcaatctctccc 26417447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 39731374 - 39731513
Alignment:
Q  66 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 165  Q
    ||||||||||||| ||||||||||||  |||| |||   || ||||| | |  |||||| |||||||  ||||| ||||||||   |  || |||||| |    
T  39731374 gagattggaaaaagggtagaaattagggttgttctttgtgaacttgtcagatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgat 39731473  T
Q  166 agtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||| |||||||||||  ||||||||||||    
T  39731474 agtggattggagagttcaatctctcctccagagtaggtca 39731513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 2390330 - 2390442
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 207  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||   |||||||||||||||||||||||||||  ||||||||||||      
T  2390330 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaataact-catatatagtggattggagagatcaatctctcctccagagtaggtca-a 2390427  T
Q  208 gttgtaccgaactag 222  Q
    |||| ||||||||||    
T  2390428 gttggaccgaactag 2390442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 18396412 - 18396486
Alignment:
Q  155 aattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaaca 229  Q
    ||||||||| ||| |||||||||||||||||||||||   ||||||||||| || || |||||||| | ||||||    
T  18396412 aattcattgatagaggattggagagatcaatctctcctcaagagtaggtcaatggtggaccgaactgggtaaaca 18396486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 23565170 - 23565085
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||| |  |||||||||||    
T  23565170 taatttcttgtaactcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctctcctagagtaggtca 23565085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 31105556 - 31105388
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| |||||||||||||| | |||   || |||||| ||| |||||| ||||||||  |||| |||| |||| || || | |||||     
T  31105556 gagattgggaaaatgggtagaaattagattttttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctttttgtaagaact-cattga 31105458  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctt 235  Q
    | ||||||||||||||| ||||||||||  ||||||| |||  |||| |||||||| | |||||| |||||    
T  31105457 tggtggattggagagataaatctctccccaagagtagatca-agttggaccgaactgggtaaacatttctt 31105388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 31519007 - 31519076
Alignment:
Q  166 agtggattggagagatcaatctctc-ccacagagtaggtcattgttgtaccgaactagataaacaattctt 235  Q
    ||||||||||||||||||||||||| || ||||||||||||  |||| |||||||| |||||||| |||||    
T  31519007 agtggattggagagatcaatctctctccccagagtaggtca-agttggaccgaactggataaacatttctt 31519076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 12097932 - 12097857
Alignment:
Q  164 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgt 241  Q
    |||||||||||||||||| |||||||||| |||| |||||||  |||| |||||||||| | ||||| ||||||||||    
T  12097932 gtagtggattggagagatgaatctctcccccagattaggtca-agttggaccgaactaggtcaacaa-tctttggtgt 12097857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 25767124 - 25766984
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattg 163  Q
    ||||||||||||| || ||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  ||||| ||||||||  || || | |||||    
T  25767124 gagattggaaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccccttttgtatctcttttgaagaact-cattg 25767026  T
Q  164 gtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
     ||||||||||||||| |||||||||||  ||||||||||||    
T  25767025 atagtggattggagagttcaatctctcctccagagtaggtca 25766984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 2361135 - 2360996
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  2361135 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattga 2361037  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||| |||| ||||||||||||| |||| |||||||    
T  2361036 tagtggatttgagatatcaatctctcccccagattaggtca 2360996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 29608742 - 29608881
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  29608742 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattga 29608840  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||||||||| ||||||| ||||  ||||||||||||    
T  29608841 tagtggattggagatatcaatcactcctccagagtaggtca 29608881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 30814528 - 30814580
Alignment:
Q  153 caaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||| |||||| |||||||||||||||||||||||||||| || | |||||||    
T  30814528 caaactcattgatagtggattggagagatcaatctctcccccatattaggtca 30814580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 47676255 - 47676126
Alignment:
Q  109 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattg 208  Q
    ||||| ||| |||||| ||||||||  |||| ||||||||| || || | || || ||||||| |||||||||||||||||||| || | |||||||  |    
T  47676255 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-caatgatagtggaatggagagatcaatctctcccccatattaggtca-ag 47676158  T
Q  209 ttgtaccgaactagataaacaattctttggtgt 241  Q
    ||| |||||||| ||| ||||| ||||||||||    
T  47676157 ttggaccgaactggatcaacaa-tctttggtgt 47676126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 496054 - 496007
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||||||||||||||||||||||  | |||||||||    
T  496054 tcattgatagtggattggagagatcaatctctcccctatagtaggtca 496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 24525573 - 24525526
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||||||||||||||||||||||  ||| |||||||    
T  24525573 tcattgatagtggattggagagatcaatctctccccaagattaggtca 24525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 25615950 - 25615997
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||| |||||||||||||||||  ||||||||||||    
T  25615950 tcattgatagtggattagagagatcaatctctcctccagagtaggtca 25615997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 36146479 - 36146398
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaacaattctttggtgt 241  Q
    |||||| ||||||||| |||||||||||||||||| || | |||||||  |||| |||||||||| | ||||| ||||||||||    
T  36146479 tcattgatagtggatttgagagatcaatctctcccccatattaggtca-agttggaccgaactaggtcaacaa-tctttggtgt 36146398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 43363627 - 43363556
Alignment:
Q  75 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctct 146  Q
    ||||||||||||||||| ||||| |||| ||| |||||| ||  ||||||||||||||  ||||| ||||||    
T  43363627 aaaatggtagaaattaggtttgttcttggagagcttgttgaaactaatttattgtaactcttttgtatctct 43363556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 4178786 - 4178917
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||| ||||||||||||  |||| |||   || ||||  |||| |||||| |||||||| ||||| |||||||||||   || |||||| |||||||    
T  4178786 ggaaaaaaggtagaaattagggttgttctttgtgaacttgggaaagctaatttcttgtaacccttttgtatctctttgaa--gaactcattgatagtgga 4178883  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    ||| | || |||||||||||  ||||| ||||||    
T  4178884 ttgaacagttcaatctctcctccagagcaggtca 4178917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 203
Target Start/End: Complemental strand, 4508869 - 4508732
Alignment:
Q  66 gagattggaaaaatg-gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||| |||||| |||||||||||  |||| |||   || ||| || ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  4508869 gagattgggaaaatgagtagaaattagggttgttctttgtgagcttattgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 4508771  T
Q  165 tagtggattggagagatcaatctctcccacagagtaggt 203  Q
     |||||||||||||||||||||||| |  ||||||||||    
T  4508770 gagtggattggagagatcaatctcttcttcagagtaggt 4508732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 31733078 - 31732993
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||||||||  |||| ||||||||| || || | ||||| || ||||||||||||||||||||||||| || | |||||||    
T  31733078 taatttcttgtaacccatttgtatctctttgtaagaact-cattgatactggattggagagatcaatctctcccccaaattaggtca 31732993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 186
Target Start/End: Complemental strand, 36574710 - 36574558
Alignment:
Q  33 agtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatggtagaaatta-gatttgtgcttgaagatcttgttaaagttaatttattgtaa 131  Q
    |||||||| ||| ||||||||| ||||| | || |||||||  ||| ||||||||||| ||||||| |||   ||  ||||| ||| |||||| ||||||    
T  36574710 agtgaaaattatcgagtgtcttgtttattggag-agattggggaaa-ggtagaaattaagatttgttctttgtgagtttgttgaagctaatttcttgtaa 36574613  T
Q  132 cctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatc 186  Q
    || ||||  ||||||||| ||  || |||||| |||||| |||||||||||||||    
T  36574612 cccttttatatctctttgtaaagaactcattgatagtggtttggagagatcaatc 36574558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 1113705 - 1113801
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| || |||||  |||| ||||||||| || || | ||||| |||| ||||||||||||||||||||||| || | |||||||    
T  1113705 cttgttgaagctaatttcttataacccatttgtatctctttgtaagaact-cattgatagtagattggagagatcaatctctcccccatattaggtca 1113801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 1360338 - 1360230
Alignment:
Q  43 attgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacc--tttttgc 140  Q
    ||||||| |||| || |||||| |||||||| |||| |||||||||||| |||   |||| ||| |||||| |||  ||||| ||||||||  ||||||     
T  1360338 attgagtctcttgttcatggaatgagattgggaaaaaggtagaaattaggttttgtcttggagaacttgttgaagcgaatttcttgtaacccttttttgt 1360239  T
Q  141 atctctttg 149  Q
    |||||||||    
T  1360238 atctctttg 1360230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 6360072 - 6359992
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctct 189  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||| ||||||||||||||||||||    
T  6360072 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagttgattggagagatcaatctct 6359992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 48599405 - 48599372
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcc 191  Q
    |||||| |||||||||||||||||||||||||||    
T  48599405 tcattgatagtggattggagagatcaatctctcc 48599372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 434545 - 434677
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||    
T  434545 ggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgatagtgga 434643  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||| |||||||||||  ||||||||||||    
T  434644 ttggagagttcaatctctcctccagagtaggtca 434677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 930 - 1059
Alignment:
Q  74 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 173  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| |||||||||||   || |||||| |||||||||    
T  930 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgaac--aactcattgatagtggatt 1027  T
Q  174 ggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||||||  ||||||||||||    
T  1028 ggagagttcaatctctcctccagagtaggtca 1059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 245
Target Start/End: Original strand, 10548 - 10671
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaa 218  Q
    ||||||||||||||| ||||| ||||||||| || || | | ||| |||||||||| ||||||||||||||||  ||||||||||||  |||| ||||||    
T  10548 taatttattgtaaccattttgtatctctttgtaagaact-cgttgatagtggattgaagagatcaatctctcctccagagtaggtca-agttggaccgaa 10645  T
Q  219 ctagataaacaattctttggtgttgtt 245  Q
    || | |||||| ||| |||||||||||    
T  10646 ctgggtaaacatttc-ttggtgttgtt 10671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 11569 - 11701
Alignment:
Q  72 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 171  Q
    ||||||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||   |||| ||||||||| || || | ||||| |||||||    
T  11569 ggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattgatagtgga 11667  T
Q  172 ttggagagatcaatctctcccacagagtaggtca 205  Q
    |||||||| |||||||||||  ||||||||||||    
T  11668 ttggagagttcaatctctcctccagagtaggtca 11701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 114650 - 114744
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggt 203  Q
    ||||| |||| |||||| |||||||  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||    
T  114650 cttgtcaaagctaatttcttgtaacgcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggt 114744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 149168 - 149123
Alignment:
Q  158 tcattggtagtggattggagagatcaatctctcccacagagtaggt 203  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||    
T  149168 tcattgatagtggattggagagatcaatctctcccccagagtaggt 149123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 7332 - 7457
Alignment:
Q  66 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 164  Q
    |||||||||||||||| |||||||||   |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  7332 gagattggaaaaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 7430  T
Q  165 tagtggattggagagatcaatctctcc 191  Q
    |||||||||||| ||||||||||||||    
T  7431 tagtggattggaaagatcaatctctcc 7457  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 18123 - 18028
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| ||  || |||||| |||||||||||||||||||||||||||  ||| ||||||||    
T  18123 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaa--aactcattgatagtggattggagagatcaatctctcctccagggtaggtca 18028  T

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Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 205
Target Start/End: Complemental strand, 20535 - 20439
Alignment:
Q  108 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | ||| || ||||||||||||||||||||||||| |||| |||||||    
T  20535 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-ctttgatattggattggagagatcaatctctcccccagattaggtca 20439  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 182
Target Start/End: Original strand, 25068 - 25175
Alignment:
Q  75 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattg 174  Q
    ||||||||||||| ||| ||||| |||  |||  ||||| ||| |||||| |||||||||||||| ||||||||| ||  || |||||| ||||| | |     
T  25068 aaaatggtagaaactagttttgttctttgagagtttgttgaaggtaatttcttgtaacctttttgtatctctttgtaaagaactcattgatagtgaagta 25167  T
Q  175 gagagatc 182  Q
    ||||||||    
T  25168 gagagatc 25175  T

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Target: scaffold0491 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 8845 - 8759
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||| ||||| ||||||||   |  || || ||| ||||||||||||||| |||||||||||  ||||||||||||    
T  8845 taatttcttgtaacccttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtca 8759  T

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Target: scaffold0491; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 11271 - 11185
Alignment:
Q  119 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    |||||| |||||||| ||||| ||||||||   |  || || ||| ||||||||||||||| |||||||||||  ||||||||||||    
T  11271 taatttcttgtaacccttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtca 11185  T

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Target: scaffold0674 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 3790 - 3750
Alignment:
Q  165 tagtggattggagagatcaatctctcccacagagtaggtca 205  Q
    ||||||||||||||| |||||||||||  ||||||||||||    
T  3790 tagtggattggagagttcaatctctcctccagagtaggtca 3750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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