View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11807_high_13 (Length: 257)

Name: NF11807_high_13
Description: NF11807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11807_high_13
NF11807_high_13
[»] chr2 (31 HSPs)
chr2 (23-257)||(16209408-16209643)
chr2 (129-257)||(33069145-33069273)
chr2 (124-257)||(37810119-37810252)
chr2 (151-257)||(42251196-42251302)
chr2 (172-257)||(3466408-3466493)
chr2 (124-257)||(45300340-45300473)
chr2 (140-236)||(9430191-9430287)
chr2 (151-257)||(25666798-25666904)
chr2 (129-257)||(1469719-1469845)
chr2 (164-253)||(44247575-44247664)
chr2 (146-257)||(42029375-42029486)
chr2 (132-254)||(15194516-15194638)
chr2 (151-256)||(42251163-42251268)
chr2 (156-257)||(4237255-4237356)
chr2 (127-256)||(41496035-41496164)
chr2 (130-194)||(42094298-42094362)
chr2 (130-237)||(12779481-12779587)
chr2 (166-257)||(18719764-18719854)
chr2 (153-256)||(33171633-33171736)
chr2 (183-257)||(42094235-42094308)
chr2 (126-211)||(25666877-25666962)
chr2 (122-194)||(44487248-44487320)
chr2 (121-192)||(35715071-35715142)
chr2 (125-194)||(3466483-3466552)
chr2 (150-251)||(29160840-29160941)
chr2 (205-257)||(1930703-1930755)
chr2 (165-244)||(17383774-17383853)
chr2 (151-213)||(16209375-16209437)
chr2 (126-219)||(12703543-12703636)
chr2 (130-194)||(18719712-18719774)
chr2 (185-257)||(2683410-2683482)
[»] chr5 (22 HSPs)
chr5 (126-257)||(3907631-3907760)
chr5 (126-253)||(41169427-41169554)
chr5 (130-257)||(25545199-25545324)
chr5 (126-257)||(4190092-4190225)
chr5 (123-244)||(42420063-42420184)
chr5 (126-218)||(33029469-33029561)
chr5 (130-257)||(22399749-22399876)
chr5 (146-200)||(28907363-28907417)
chr5 (146-200)||(28943758-28943812)
chr5 (123-257)||(36059181-36059313)
chr5 (161-256)||(27195262-27195357)
chr5 (154-257)||(38029573-38029676)
chr5 (149-211)||(32309676-32309738)
chr5 (140-257)||(4158068-4158185)
chr5 (126-219)||(40927677-40927770)
chr5 (160-212)||(33029572-33029624)
chr5 (126-194)||(35244916-35244984)
chr5 (146-190)||(42420012-42420056)
chr5 (125-221)||(36004995-36005089)
chr5 (174-223)||(36945672-36945721)
chr5 (185-237)||(12504640-12504692)
chr5 (150-194)||(17474869-17474913)
[»] chr6 (24 HSPs)
chr6 (121-257)||(12731524-12731660)
chr6 (124-257)||(11650922-11651056)
chr6 (127-214)||(24110039-24110126)
chr6 (123-237)||(4032957-4033073)
chr6 (130-194)||(31946914-31946978)
chr6 (124-194)||(17389993-17390063)
chr6 (126-257)||(5706651-5706783)
chr6 (126-257)||(4483399-4483530)
chr6 (143-257)||(24783899-24784013)
chr6 (203-253)||(26328213-26328263)
chr6 (121-194)||(4033088-4033161)
chr6 (126-194)||(10729959-10730025)
chr6 (130-194)||(1473594-1473658)
chr6 (165-257)||(6643329-6643421)
chr6 (130-194)||(9645013-9645077)
chr6 (130-194)||(9651030-9651094)
chr6 (126-257)||(9644892-9645023)
chr6 (126-257)||(9650909-9651040)
chr6 (123-190)||(28865490-28865556)
chr6 (129-219)||(479781-479871)
chr6 (216-257)||(1473648-1473689)
chr6 (204-257)||(3150242-3150295)
chr6 (124-192)||(4483341-4483407)
chr6 (154-194)||(34093908-34093948)
[»] chr4 (31 HSPs)
chr4 (126-257)||(16457953-16458083)
chr4 (140-257)||(21433862-21433979)
chr4 (125-257)||(15134600-15134732)
chr4 (140-257)||(2247569-2247685)
chr4 (127-216)||(7403157-7403246)
chr4 (160-257)||(31758720-31758817)
chr4 (124-257)||(45653986-45654117)
chr4 (126-257)||(3688603-3688735)
chr4 (154-255)||(9023945-9024046)
chr4 (125-194)||(15134541-15134610)
chr4 (150-211)||(33414002-33414063)
chr4 (129-210)||(48791211-48791291)
chr4 (119-212)||(52374885-52374978)
chr4 (154-257)||(38036270-38036371)
chr4 (140-257)||(1338422-1338537)
chr4 (130-211)||(21433952-21434033)
chr4 (140-257)||(33414036-33414153)
chr4 (151-256)||(52374951-52375056)
chr4 (201-257)||(2324791-2324847)
chr4 (122-257)||(41840564-41840698)
chr4 (140-178)||(42516557-42516595)
chr4 (183-257)||(51578037-51578110)
chr4 (140-192)||(16577242-16577294)
chr4 (154-194)||(31758690-31758730)
chr4 (126-181)||(29566051-29566106)
chr4 (154-211)||(19382300-19382357)
chr4 (150-199)||(34119639-34119688)
chr4 (126-194)||(993293-993361)
chr4 (201-257)||(17181269-17181325)
chr4 (129-217)||(28987249-28987337)
chr4 (173-217)||(41960554-41960597)
[»] chr3 (25 HSPs)
chr3 (124-255)||(36480680-36480811)
chr3 (126-257)||(14345126-14345257)
chr3 (126-257)||(35357292-35357423)
chr3 (151-257)||(11532435-11532541)
chr3 (151-257)||(32881030-32881136)
chr3 (164-257)||(31205402-31205495)
chr3 (151-256)||(40554072-40554177)
chr3 (154-257)||(37341257-37341359)
chr3 (151-257)||(29955071-29955177)
chr3 (151-257)||(30004225-30004331)
chr3 (150-211)||(3901572-3901633)
chr3 (160-257)||(19158692-19158788)
chr3 (126-206)||(1458515-1458593)
chr3 (130-211)||(36480786-36480867)
chr3 (183-256)||(40763400-40763473)
chr3 (164-253)||(45332557-45332646)
chr3 (124-257)||(51541218-51541351)
chr3 (151-223)||(799308-799380)
chr3 (154-194)||(3300726-3300766)
chr3 (151-211)||(3901499-3901559)
chr3 (130-194)||(26986272-26986336)
chr3 (160-218)||(33244698-33244756)
chr3 (130-199)||(36007446-36007515)
chr3 (130-194)||(1458633-1458697)
chr3 (151-223)||(37768459-37768530)
[»] chr7 (22 HSPs)
chr7 (149-257)||(2276275-2276383)
chr7 (126-257)||(3235534-3235665)
chr7 (126-257)||(12275715-12275844)
chr7 (124-257)||(5443503-5443635)
chr7 (124-257)||(5452548-5452680)
chr7 (150-257)||(10056622-10056729)
chr7 (154-257)||(40134391-40134492)
chr7 (128-211)||(12275817-12275900)
chr7 (191-257)||(47497740-47497806)
chr7 (124-194)||(49107001-49107071)
chr7 (124-212)||(47497778-47497866)
chr7 (154-257)||(26862916-26863019)
chr7 (127-194)||(31042115-31042182)
chr7 (130-194)||(5443625-5443689)
chr7 (130-194)||(5452670-5452734)
chr7 (126-191)||(316458-316523)
chr7 (202-257)||(18089753-18089808)
chr7 (154-257)||(49106909-49107011)
chr7 (130-191)||(10056722-10056783)
chr7 (130-211)||(26862992-26863073)
chr7 (201-257)||(11201326-11201382)
chr7 (130-194)||(26647786-26647850)
[»] chr1 (26 HSPs)
chr1 (144-257)||(2542695-2542808)
chr1 (123-251)||(49822566-49822695)
chr1 (126-238)||(7444333-7444445)
chr1 (147-256)||(31970116-31970225)
chr1 (126-257)||(34437631-34437761)
chr1 (121-257)||(40668962-40669096)
chr1 (123-257)||(23317942-23318074)
chr1 (146-257)||(45563099-45563210)
chr1 (126-196)||(7444256-7444326)
chr1 (146-200)||(16661810-16661864)
chr1 (126-257)||(731305-731436)
chr1 (142-237)||(38948145-38948240)
chr1 (129-257)||(49403505-49403633)
chr1 (151-257)||(34437598-34437703)
chr1 (125-234)||(939390-939499)
chr1 (154-257)||(40374042-40374142)
chr1 (151-257)||(38663684-38663790)
chr1 (151-249)||(45215368-45215466)
chr1 (135-194)||(21281461-21281521)
chr1 (135-172)||(5695662-5695699)
chr1 (172-221)||(5695744-5695793)
chr1 (184-253)||(33422668-33422737)
chr1 (151-256)||(45925108-45925213)
chr1 (125-194)||(939306-939377)
chr1 (130-257)||(16257558-16257682)
chr1 (146-194)||(34783443-34783491)
[»] chr8 (25 HSPs)
chr8 (151-257)||(40175893-40176000)
chr8 (127-257)||(40694589-40694719)
chr8 (128-221)||(27072884-27072977)
chr8 (126-257)||(2288632-2288763)
chr8 (127-257)||(40696221-40696351)
chr8 (160-257)||(34504386-34504483)
chr8 (146-257)||(35586437-35586547)
chr8 (126-254)||(20271044-20271177)
chr8 (126-254)||(21057672-21057805)
chr8 (165-257)||(26018476-26018566)
chr8 (126-257)||(4994188-4994317)
chr8 (130-212)||(36009900-36009982)
chr8 (117-192)||(2288565-2288640)
chr8 (125-211)||(38357543-38357629)
chr8 (160-255)||(38835035-38835132)
chr8 (124-172)||(36009845-36009893)
chr8 (150-257)||(40175927-40176034)
chr8 (156-257)||(2171031-2171133)
chr8 (158-256)||(21124958-21125055)
chr8 (126-211)||(42072637-42072720)
chr8 (183-257)||(42072693-42072767)
chr8 (130-190)||(8402578-8402636)
chr8 (141-194)||(13772489-13772542)
chr8 (162-219)||(30262769-30262826)
chr8 (154-257)||(8402483-8402584)
[»] scaffold0137 (1 HSPs)
scaffold0137 (150-243)||(8228-8320)
[»] scaffold0620 (1 HSPs)
scaffold0620 (154-194)||(9242-9282)
[»] scaffold0003 (1 HSPs)
scaffold0003 (130-190)||(136421-136481)


Alignment Details
Target: chr2 (Bit Score: 173; Significance: 4e-93; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 23 - 257
Target Start/End: Complemental strand, 16209643 - 16209408
Alignment:
Q  23 tgtcacgcacatttcacaaaatttattacttcaacannnnnnnnnaaacattgaataataaactacccttt-tatataaatgcaatcaatgttacttttt 121  Q
    |||||||||||||||| |||||||||||||||||||         ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  16209643 tgtcacgcacatttcagaaaatttattacttcaacaatttttttcaaacattgaataataaattaccctttgtatataaatgcaatcaatgttacttttt 16209544  T
Q  122 atatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatggga 221  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16209543 atatgagaaatgctagcaacacatattctaacatacacttttcaacgcattctctttgatcagttaaaattcaaatgaaacccaccaaatttatatggga 16209444  T
Q  222 ccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||||||||||||||||| |||||||||||||||    
T  16209443 ccgacaaaatttggtggaactcatgtgaattttaac 16209408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 129 - 257
Target Start/End: Original strand, 33069145 - 33069273
Alignment:
Q  129 aaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaa 228  Q
    ||||| |||| ||||| |||||| |||||||||||||||||| | ||||||||||||||||||||| || | ||||||||| ||||||||||||| |||     
T  33069145 aaatgttagcaacacacattctatcacacacttttcaacacactttctttgatcggttaaaattcacattagacccaccaagtttatatgggacccacat 33069244  T
Q  229 aatttggtggaacccatgtgaattttaac 257  Q
    ||||| |||| ||||| |||| |||||||    
T  33069245 aatttagtgggacccaagtgatttttaac 33069273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 37810119 - 37810252
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggacc 223  Q
    |||||||||| |||| | | | ||| |||| || ||||||||||||| |||||||||| ||||| |||||| |||  |||||||||||||||||||||||    
T  37810119 atgagaaatggtagcaaaatacattttaactcatacttttcaacacactctctttgattggttataattcacatgggacccaccaaatttatatgggacc 37810218  T
Q  224 gacaaaatttggtggaacccatgtgaattttaac 257  Q
     |   |||||||||| ||||||||||||||||||    
T  37810219 catctaatttggtgggacccatgtgaattttaac 37810252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 42251302 - 42251196
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaa 250  Q
    |||||||||||||||||||| |||||||||| | |||||||||| |||  | ||||||||||||||| || || ||| |||||||||| ||||||| |||    
T  42251302 aacacacacttttcaacacactctctttgattgattaaaattcacatgggatccaccaaatttatataggtcccacataatttggtgggacccatgcgaa 42251203  T
Q  251 ttttaac 257  Q
    |||||||    
T  42251202 ttttaac 42251196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 3466408 - 3466493
Alignment:
Q  172 tctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||||||| |||||||||||| |||| |||||||||||| |||||||||| |||  |||| |||||||||||||||||||||||    
T  3466408 tctctttgattggttaaaattcacatgagacccaccaaattcatatgggacccacacgatttagtggaacccatgtgaattttaac 3466493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 45300340 - 45300473
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggacc 223  Q
    |||||||||| || | |||||| |||||||||||| ||||||||||| ||  |||||| ||||||||| || |||  |||||| |||| |||||||||||    
T  45300340 atgagaaatgttaacaacacatcttctaacacacatttttcaacacactccttttgattggttaaaatacatatgggacccactaaatctatatgggacc 45300439  T
Q  224 gacaaaatttggtggaacccatgtgaattttaac 257  Q
     | | |||||| ||||| ||||||||||||||||    
T  45300440 catataatttgatggaatccatgtgaattttaac 45300473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 9430287 - 9430191
Alignment:
Q  140 acacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggt 236  Q
    ||||| ||||||||||||||||||||||| ||||| |||||| |||||||||||| ||||| |||| ||||||| ||||||||| |||  |||||||    
T  9430287 acacacattctaacacacacttttcaacatattctatttgattggttaaaattcacatgaaccccatcaaatttgtatgggacccacatgatttggt 9430191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 25666798 - 25666904
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaa 250  Q
    |||||||| ||||||||||| ||| |||||| | |||||||||| |||| ||||||||||||||||||| ||| |||  ||||||||| | ||||||| |    
T  25666798 aacacacatttttcaacacactctatttgattgattaaaattcacatgagacccaccaaatttatatggaacctacatgatttggtgggatccatgtgga 25666897  T
Q  251 ttttaac 257  Q
    |||||||    
T  25666898 ttttaac 25666904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 257
Target Start/End: Original strand, 1469719 - 1469845
Alignment:
Q  129 aaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaa 228  Q
    |||| |||||||||||| ||  |||||| | ||||||||||| ||| ||| || |||||||||||| ||| || ||||||||||||||||||||| |||     
T  1469719 aaatactagcgacacatttt--aacacatatttttcaacacactctatttaattggttaaaattcacatggaatccaccaaatttatatgggacccacat 1469816  T
Q  229 aatttggtggaacccatgtgaattttaac 257  Q
     |||| |||| | ||||||||||||||||    
T  1469817 gattttgtgggatccatgtgaattttaac 1469845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 44247664 - 44247575
Alignment:
Q  164 caacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    ||||||| |||||||||| |||||||||||| |||  | ||| ||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  44247664 caacacactctctttgattggttaaaattcacatgggatccatcaaatttgtatgggacccacataatttggtggaacccatgtgaattt 44247575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 42029486 - 42029375
Alignment:
Q  146 attctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccat 245  Q
    ||||||||||||||||||||||||| | | ||| || |||||||||||| |||| ||||||||||||||||||||  |  ||  ||||||| | ||||||    
T  42029486 attctaacacacacttttcaacacacttttttttattggttaaaattcacatgagacccaccaaatttatatggggtccgcatgatttggtaggacccat 42029387  T
Q  246 gtgaattttaac 257  Q
     |||||||||||    
T  42029386 atgaattttaac 42029375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 15194516 - 15194638
Alignment:
Q  132 tgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaat 231  Q
    ||||||| ||||| ||| ||||| |||||||||| |||| ||| |||||| |||||||| ||| |||   | |||||||| |||||||||||||||  ||    
T  15194516 tgctagcaacacaaattttaacatacacttttcagcacactctttttgattggttaaaagtcacatgggtcgcaccaaatatatatgggaccgacatgat 15194615  T
Q  232 ttggtggaacccatgtgaatttt 254  Q
    ||||||| || ||||||||||||    
T  15194616 ttggtgggacacatgtgaatttt 15194638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 42251163 - 42251268
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgaca-aaatttggtggaacccatgtga 249  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||  |||   ||||||||| |||| ||||||| | | |||||||||||| |||||||||    
T  42251163 aacacacatttttcgacacactctctttgatcggttaaaattcgcatgggtcccaccaaa-ttatgtgggacctatataaatttggtggatcccatgtga 42251261  T
Q  250 attttaa 256  Q
    |||||||    
T  42251262 attttaa 42251268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 4237255 - 4237356
Alignment:
Q  156 acacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaatttta 255  Q
    ||||||| |||||  |||| |||||| |||||||||| | |||  | ||||||||||| ||||||||| |||  ||||||||| ||||||||||||||||    
T  4237255 acactttccaacattttctttttgattggttaaaatttacatgggatccaccaaatttgtatgggacccacatgatttggtggtacccatgtgaatttta 4237354  T
Q  256 ac 257  Q
    ||    
T  4237355 ac 4237356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 41496035 - 41496164
Alignment:
Q  127 agaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgac 226  Q
    ||||||| || | ||| ||||| ||||||||||||||||| ||| | |||||||| |||||||||||| || ||| | ||||||||||||| | ||| ||    
T  41496035 agaaatggtaacaacatatattttaacacacacttttcaatacactatctttgattggttaaaattcacataaaatctaccaaatttatatagaacccac 41496134  T
Q  227 aaaatttggtggaacccatgtgaattttaa 256  Q
       |||| |||  |||||||||||||||||    
T  41496135 ttgatttagtgtgacccatgtgaattttaa 41496164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 42094362 - 42094298
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||| ||||| ||| |||||||||||||||||||||  ||||||||| ||||||||||||    
T  42094362 aatgctagcaacacacattttaacacacacttttcaacacacactctttgattggttaaaattca 42094298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 12779481 - 12779587
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaa 229  Q
    ||||||||| |||||  |||||||| ||| ||||||||||||||| |||||| |||||||||||| |||  | |||||||||| ||||| |||| |||      
T  12779481 aatgctagcaacacaccttctaacatacatttttcaacacattct-tttgattggttaaaattcacatgggatccaccaaattcatatgtgacccacatg 12779579  T
Q  230 atttggtg 237  Q
    ||||||||    
T  12779580 atttggtg 12779587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 18719854 - 18719764
Alignment:
Q  166 acacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    ||||| |||||||||| ||||||| || | |||| ||||| ||||||||||||||||| |||  |||||||||||| | |||||||||||||    
T  18719854 acacactctctttgattggttaaattt-acatgagacccatcaaatttatatgggacccacatgatttggtggaactcgtgtgaattttaac 18719764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 256
Target Start/End: Complemental strand, 33171736 - 33171633
Alignment:
Q  153 cacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaatt 252  Q
    |||||||||||||||||| |||||||||| ||||||| |||| |||   |||||||||||||||  || |  |||  ||||||||| |||||| ||||||    
T  33171736 cacacacttttcaacacactctctttgattggttaaatttcacatgggtcccaccaaatttatacaggtcttacatgatttggtgggacccatatgaatt 33171637  T
Q  253 ttaa 256  Q
    ||||    
T  33171636 ttaa 33171633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 42094235 - 42094308
Alignment:
Q  183 ggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||||||||| |||  ||||||||||||||||||||||| |||  ||||||||| | ||||||||||||||||    
T  42094235 ggttaaaattcacatgggacccaccaaatttatatgggacccacatgatttggtggga-ccatgtgaattttaac 42094308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 25666962 - 25666877
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaat 211  Q
    ||||||||||||| ||||| ||| ||||| ||| ||||||||||| ||||||||||  |||||||| || ||| | ||||||||||    
T  25666962 gagaaatgctagcaacacacattttaacatacaattttcaacacactctctttgatgtgttaaaatccacatggatcccaccaaat 25666877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 194
Target Start/End: Complemental strand, 44487320 - 44487248
Alignment:
Q  122 atatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    |||||||||||| |||| ||| ||||| || ||||||||||| || ||| ||| |||||||||||||||||||    
T  44487320 atatgagaaatgttagcaacatatattttaccacacactttttaatacactctttttgatcggttaaaattca 44487248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 35715142 - 35715071
Alignment:
Q  121 tatatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaatt 192  Q
    |||| ||||||||| ||| ||||| ||| ||| ||||||||||||| ||| |||||||||| ||||||||||    
T  35715142 tataagagaaatgccagcaacacacattttaagacacacttttcaatacactctctttgattggttaaaatt 35715071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 3466552 - 3466483
Alignment:
Q  125 tgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    |||| ||||||||| ||||| ||| |||||||||||||  |||| | |||||||||| ||||||||||||    
T  3466552 tgaggaatgctagcaacacacattttaacacacactttcaaacatagtctctttgattggttaaaattca 3466483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 29160840 - 29160941
Alignment:
Q  150 taacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtga 249  Q
    |||||||||||||||||||||   ||||| || | ||||||| || |||| || ||| ||||||||||| |||| ||| ||||||||||  ||||| |||    
T  29160840 taacacacacttttcaacacaccatctttaattgattaaaatccacatgagactcactaaatttatatgagacccacataatttggtggggcccatatga 29160939  T
Q  250 at 251  Q
    ||    
T  29160940 at 29160941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 1930755 - 1930703
Alignment:
Q  205 accaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    ||||||||||||||||||| ||| |||||| ||||||  ||||||||||||||    
T  1930755 accaaatttatatgggacccacataatttgatggaacatatgtgaattttaac 1930703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 17383774 - 17383853
Alignment:
Q  165 aacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaaccca 244  Q
    |||||| ||||||| || |||||||| ||| |||   |||||||||||| ||||||||| ||| |||||||||| |||||    
T  17383774 aacacactctcttttattggttaaaagtcatatgggtcccaccaaatttctatgggacccacataatttggtgggaccca 17383853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 16209375 - 16209437
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaattt 213  Q
    |||||||||||| ||||||| ||||||| || |||||||||||| ||||   |||||||||||    
T  16209375 aacacacactttccaacacactctctttaattggttaaaattcacatgagttccaccaaattt 16209437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 12703636 - 12703543
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgg 219  Q
    ||||||||||||  ||| ||||| ||| | ||| ||||||||||||| ||||||||  |||||||||||   || |||||| | ||||||||||    
T  12703636 gagaaatgctagtaacatatattttaatatacatttttcaacacattttctttgattagttaaaattcattagagacccactatatttatatgg 12703543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 18719712 - 18719774
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||| ||||| |||||||||||   ||||||||||| ||| |||||| ||||||||||||    
T  18719712 aatgctagcaacacacattctaacacat--ttttcaacacactctttttgattggttaaaattca 18719774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 2683410 - 2683482
Alignment:
Q  185 ttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||||||| |||  ||||||| ||||||||  ||||| |||  |||||||||||||||| | |||||||||    
T  2683410 ttaaaattcatatgggacccaccgaatttatactggacccacatgatttggtggaacccatataaattttaac 2683482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 8e-36; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 3907631 - 3907760
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||  ||||||||| |||||||||||| |||  ||||||||||||||||||||||| |    
T  3907631 gagaaatgctagcaacacacattctaacaaacacttttcaacaca--ctctttgattggttaaaattcacatgggacccaccaaatttatatgggaccca 3907728  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
    ||  ||||||||| ||||||||||||||||||    
T  3907729 catgatttggtgggacccatgtgaattttaac 3907760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 253
Target Start/End: Complemental strand, 41169554 - 41169427
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    ||||||||||||  ||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||| |||  | ||||||||||||||||||||       
T  41169554 gagaaatgctagtaacacatattttaacacacatttttcaacacactctctttgatccgttaaaattcacatgtgatccaccaaatttatatgggactcg 41169455  T
Q  226 caaaatttggtggaacccatgtgaattt 253  Q
    ||  ||||||||||| ||||||||||||    
T  41169454 catgatttggtggaatccatgtgaattt 41169427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 257
Target Start/End: Original strand, 25545199 - 25545324
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaa 229  Q
    ||||||||| | ||| ||| ||||||||| |||||||||||  ||||||||| |||||||||||| |||| |||||| ||||||||||||||||||||      
T  25545199 aatgctagcaatacacattttaacacacatttttcaacaca--ctctttgattggttaaaattcacatgagacccactaaatttatatgggaccgacatg 25545296  T
Q  230 atttggtggaacccatgtgaattttaac 257  Q
    ||||||||| || || ||||||||||||    
T  25545297 atttggtgggactcacgtgaattttaac 25545324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 4190225 - 4190092
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacat--tctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggacc 223  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||   |||||||||| |||||||||||| |||  |||||||||||| | || |||||    
T  4190225 gagaaatgctagcaacatacattctaacacacacttttcaacacacggtctctttgataggttaaaattcacatgggacccaccaaattcacataggacc 4190126  T
Q  224 gacaaaatttggtggaacccatgtgaattttaac 257  Q
     ||  |||||| ||| | ||||||||||||||||    
T  4190125 cacgtaatttgttgggatccatgtgaattttaac 4190092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 244
Target Start/End: Complemental strand, 42420184 - 42420063
Alignment:
Q  123 tatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggac 222  Q
    ||||||||||| |||| ||||| ||||||| |||| |||||||||||| ||| |||||| |||||||| ||| |||| | ||| |||||||||||||||     
T  42420184 tatgagaaatgttagcaacacacattctaaaacacgcttttcaacacactctatttgattggttaaaactcacatgagatccatcaaatttatatgggat 42420085  T
Q  223 cgacaaaatttggtggaaccca 244  Q
    | |||  ||||||||| |||||    
T  42420084 ccacatgatttggtgggaccca 42420063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 33029469 - 33029561
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatg 218  Q
    ||||||||||||| ||||||||| ||||| | ||||||||||||||||||||| ||  ||||||||||| || |  |||||||||||||||||    
T  33029469 gagaaatgctagcaacacatattttaacatatacttttcaacacattctctttaattagttaaaattcatataagtcccaccaaatttatatg 33029561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 257
Target Start/End: Original strand, 22399749 - 22399876
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaa 229  Q
    ||||||||| ||||| ||||||| || |||||||||||||| ||| |||||| || ||||||||| |||| |||||||||||| ||||| |||| | |      
T  22399749 aatgctagcaacacacattctaatactcacttttcaacacactctttttgattggataaaattcacatgagacccaccaaattcatatgagacccagatg 22399848  T
Q  230 atttggtggaacccatgtgaattttaac 257  Q
    |||| || | || |||||||||||||||    
T  22399849 atttagtaggactcatgtgaattttaac 22399876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 28907363 - 28907417
Alignment:
Q  146 attctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaa 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  28907363 attctaacacacatttttcaacacattctctttgatcggttaaaattcacatgaa 28907417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 28943758 - 28943812
Alignment:
Q  146 attctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaa 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  28943758 attctaacacacatttttcaacacattctctttgatcggttaaaattcacatgaa 28943812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 257
Target Start/End: Original strand, 36059181 - 36059313
Alignment:
Q  123 tatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggac 222  Q
    |||||||||||||||| ||||||||| ||||| |   |||| |||| | |||||||||| | |||| ||||| |||| ||||| |||||||||||| |||    
T  36059181 tatgagaaatgctagcaacacatattttaacataa--tttttaacagaatctctttgattgattaagattcacatgagacccatcaaatttatatgagac 36059278  T
Q  223 cgacaaaatttggtggaacccatgtgaattttaac 257  Q
    | |||  ||||| ||| | |||||| |||||||||    
T  36059279 ccacatgatttgatgggatccatgtaaattttaac 36059313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 256
Target Start/End: Original strand, 27195262 - 27195357
Alignment:
Q  161 tttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaa 256  Q
    |||||||||| ||| ||| || | |||||||||| ||| |  |||||||||||||||||| ||||||  |||| |||| || ||||||||||||||    
T  27195262 tttcaacacactctttttaattgattaaaattcacatggattccaccaaatttatatgggtccgacatgattttgtgggactcatgtgaattttaa 27195357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 38029676 - 38029573
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    |||||| ||| |||||| ||| ||| ||  |||| |||||| |||||||||||| |||||||||| || | |||  ||||||||  ||||||||||||||    
T  38029676 acacacattttaacacactctttttaatgagttagaattcatatgaaacccacccaatttatatgagatccacatgatttggtgagacccatgtgaattt 38029577  T
Q  254 taac 257  Q
    ||||    
T  38029576 taac 38029573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 32309738 - 32309676
Alignment:
Q  149 ctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaat 211  Q
    ||||||||||||||||||| |||||||||||||  ||||||||| | || || ||||||||||    
T  32309738 ctaacacacacttttcaacgcattctctttgatttgttaaaatttacattaatcccaccaaat 32309676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 4158068 - 4158185
Alignment:
Q  140 acacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtgga 239  Q
    ||||| ||| ||||||||| ||||||| | ||| ||||||||||||| ||||||| ||| | |  |||||||||||||| | || ||| |||||| |||     
T  4158068 acacacattttaacacacaattttcaatatattttctttgatcggttgaaattcacatggatcataccaaatttatatgagtcccacataatttgatggg 4158167  T
Q  240 acccatgtgaattttaac 257  Q
    |  | |||||||||||||    
T  4158168 attcgtgtgaattttaac 4158185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 40927770 - 40927677
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgg 219  Q
    ||||||||||||| ||||| ||| ||||||| | ||||||||| | | |||||||| ||| |||||||| |||  ||||||||| |||| ||||    
T  40927770 gagaaatgctagcaacacacattataacacaaatttttcaacaaactatctttgattggtcaaaattcacatgggacccaccaattttacatgg 40927677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 33029624 - 33029572
Alignment:
Q  160 ttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatt 212  Q
    ||||||||||| ||||||||||||||||||| ||| ||||  |||||||||||    
T  33029624 ttttcaacacactctctttgatcggttaaaactcacatgagtcccaccaaatt 33029572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 35244984 - 35244916
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||||||| ||||| ||| ||||| |||||| |||||||| | |||||||| |||| |||||||    
T  35244984 gagaaatgctagcaacacacattttaacatacacttgtcaacacactttctttgattggttgaaattca 35244916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 42420012 - 42420056
Alignment:
Q  146 attctaacacacacttttcaacacattctctttgatcggttaaaa 190  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||    
T  42420012 attctaacacacatttttcaacacattctctttaattggttaaaa 42420056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 36004995 - 36005089
Alignment:
Q  125 tgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatggga 221  Q
    ||||||||| |||| ||||||||| ||||||||  ||| ||| ||| ||||||| |  | |||||||||| |||  | |||||||||||||||||||    
T  36004995 tgagaaatgttagcaacacatattttaacacac--tttgcaatacactctctttaagtgattaaaattcatatgggatccaccaaatttatatggga 36005089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 36945721 - 36945672
Alignment:
Q  174 tctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggacc 223  Q
    |||||||| |||||| ||||| |||||| |||||||||||||||| ||||    
T  36945721 tctttgattggttaatattcacatgaaatccaccaaatttatatgagacc 36945672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 12504640 - 12504692
Alignment:
Q  185 ttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtg 237  Q
    |||||||||| |||||  ||| ||||||||||||||||| ||| |||||||||    
T  12504640 ttaaaattcacatgaattccaacaaatttatatgggaccaacataatttggtg 12504692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 17474913 - 17474869
Alignment:
Q  150 taacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    |||||||||||||||||||||  ||||||||| | ||||||||||    
T  17474913 taacacacacttttcaacacacactctttgattgattaaaattca 17474869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 257
Target Start/End: Original strand, 12731524 - 12731660
Alignment:
Q  121 tatatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatggg 220  Q
    |||| |||||||| |||| ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||| ||||| ||||||||| ||||    
T  12731524 tatacgagaaatgttagcaacacatattctaatacacacttctcaacacattctctttgattggttaaaattcacatgagacccatcaaatttatttggg 12731623  T
Q  221 accgacaaaatttggtggaacccatgtgaattttaac 257  Q
    ||| |||  ||||||||||| | |||| |||||||||    
T  12731624 acccacatgatttggtggaagctatgtaaattttaac 12731660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 11651056 - 11650922
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcgg-ttaaaattcaaatgaaacccaccaaatttatatgggac 222  Q
    ||||||||||||| | ||| | ||| |||||| || ||||||||| | |||||||||| || |||||||| | |||  ||||||||||||||||||||||    
T  11651056 atgagaaatgctaacaacatacattttaacacgcatttttcaacataatctctttgattggcttaaaatttacatgggacccaccaaatttatatgggac 11650957  T
Q  223 cgacaaaatttggtggaacccatgtgaattttaac 257  Q
    | ||| |||||||||| | ||||||||||||||||    
T  11650956 ccacataatttggtgggatccatgtgaattttaac 11650922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 214
Target Start/End: Original strand, 24110039 - 24110126
Alignment:
Q  127 agaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaattta 214  Q
    |||||||||||| ||||||||||||| | ||| ||||||||||| |||||||||| |||||||||||| |||  | ||||||||||||    
T  24110039 agaaatgctagcaacacatattctaaaatacatttttcaacacactctctttgattggttaaaattcatatgtgatccaccaaattta 24110126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 4032957 - 4033073
Alignment:
Q  123 tatgagaaatgctagcgacacatattctaacacacac--ttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatggg 220  Q
    ||||||||||| |||| ||||||||| ||||| | ||  ||||||||||| ||||||| || |||| ||||| | ||| || ||| ||||||||||||||    
T  4032957 tatgagaaatgttagcaacacatattttaacataaacatttttcaacacactctctttaattggttgaaatttatatggaatccatcaaatttatatggg 4033056  T
Q  221 accgacaaaatttggtg 237  Q
    ||| ||| |||||||||    
T  4033057 acccacataatttggtg 4033073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 31946978 - 31946914
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||| ||||| |||||||||||||||||||||||||  || ||| |||||||||||||||    
T  31946978 aatgctagcaacacacattctaacacacacttttcaacacacacttttttatcggttaaaattca 31946914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 17390063 - 17389993
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||||||||| ||||| ||| |||||| || ||||||||||  |||||||||| ||||||||||||    
T  17390063 atgagaaatgctagcaacacacattttaacacgcaattttcaacactctctctttgattggttaaaattca 17389993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 5706783 - 5706651
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaaccca-ccaaatttatatgggaccg 224  Q
    |||||||| |||| ||||| ||| ||||||| ||||||||||||| |||||||||| | |||||||| | |||  ||||| | ||||| ||||| |||      
T  5706783 gagaaatgatagcaacacacattttaacacatacttttcaacacactctctttgattgattaaaatttacatgggacccatcaaaattgatatgagacgc 5706684  T
Q  225 acaaaatttggtggaacccatgtgaattttaac 257  Q
    |||  ||||||||| | |||| |||||||||||    
T  5706683 acatgatttggtgggatccatatgaattttaac 5706651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 4483530 - 4483399
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    ||||||| ||||| ||||| ||| |||||| |||||||||||||  ||||||||||| ||||||| |||  |    | ||||||||||||||||| || |    
T  4483530 gagaaatactagcaacacacattttaacacgcacttttcaacacgctctctttgatccgttaaaactcacgtaggtcacaccaaatttatatgggtccca 4483431  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
    ||  ||||||||| |||| | | |||||||||    
T  4483430 catgatttggtgggacccgtattaattttaac 4483399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 24784013 - 24783899
Alignment:
Q  143 catattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacc 242  Q
    |||||| ||||||||| |||| |||||| | |||||||| | |||||||| | |||| | ||| ||||||||||||| | | |||  ||||||||| | |    
T  24784013 catattataacacacattttttaacacactatctttgattgattaaaatttacatgagatccatcaaatttatatggaatccacatgatttggtgggatc 24783914  T
Q  243 catgtgaattttaac 257  Q
    ||| |||||||||||    
T  24783913 catatgaattttaac 24783899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 26328213 - 26328263
Alignment:
Q  203 ccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    ||||||||||||||||||||| |||  ||| ||||||||||||||||||||    
T  26328213 ccaccaaatttatatgggacccacatgattcggtggaacccatgtgaattt 26328263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 4033161 - 4033088
Alignment:
Q  121 tatatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||||||  || | ||||| ||| ||||||||||||||||| ||| | |||||||| ||||||||||||    
T  4033161 tatatgagaaatattaacaacacacattttaacacacacttttcaatacactatctttgattggttaaaattca 4033088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 10730025 - 10729959
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||||||  ||||| ||| ||||||||  ||||||||||  |||||||||||||||||||||||    
T  10730025 gagaaatgctagaaacacacattttaacacac--ttttcaacacgctctctttgatcggttaaaattca 10729959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 1473594 - 1473658
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||| ||||| ||| ||| ||||| ||||||||||| | |||||||| ||||||||||||    
T  1473594 aatgctagcaacacacattttaatacacatttttcaacacactatctttgattggttaaaattca 1473658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 257
Target Start/End: Original strand, 6643329 - 6643421
Alignment:
Q  165 aacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||| |||| ||||| |||||||||||| ||     ||||||||||||||||||||| |||  ||||||||| ||| || |||||||||||    
T  6643329 aacacactctcattgattggttaaaattcacatagtgaccaccaaatttatatgggacccacatgatttggtgggacctatatgaattttaac 6643421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 9645077 - 9645013
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||| || || ||||||||||| ||||| ||||||| ||| |||||| ||||||||||||    
T  9645077 aatgctagcaacccacattctaacacatactttccaacacaatctttttgattggttaaaattca 9645013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 9651094 - 9651030
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||| || || ||||||||||| ||||| ||||||| ||| |||||| ||||||||||||    
T  9651094 aatgctagcaacccacattctaacacatactttccaacacaatctttttgattggttaaaattca 9651030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 9644892 - 9645023
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    ||||||||||||| | ||||||| ||||||||| |||| || | ||| | ||| || | |||||||||| |||| | ||  |||||||||| |||||| |    
T  9644892 gagaaatgctagcaatacatattttaacacacattttttaatatattattttttattgattaaaattcatatgagatccggcaaatttatacgggaccca 9644991  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
    | |||||| | || ||  ||||||||||||||    
T  9644992 ccaaattttgcgggacatatgtgaattttaac 9645023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 9650909 - 9651040
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    ||||||||||||| | ||||||| ||||||||| |||| || | ||| | ||| || | |||||||||| |||| | ||  |||||||||| |||||| |    
T  9650909 gagaaatgctagcaatacatattttaacacacattttttaatatattattttttattgattaaaattcatatgagatccggcaaatttatacgggaccca 9651008  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
    | |||||| | || ||  ||||||||||||||    
T  9651009 ccaaattttgcgggacatatgtgaattttaac 9651040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 28865556 - 28865490
Alignment:
Q  123 tatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaa 190  Q
    |||||||||||||||| ||||| ||| |||||| || ||||||||||  |||||||||| ||||||||    
T  28865556 tatgagaaatgctagcaacacacattgtaacacgca-ttttcaacacgctctctttgattggttaaaa 28865490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 479781 - 479871
Alignment:
Q  129 aaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgg 219  Q
    |||||||||| ||||| ||| ||| | ||| ||||||| ||| | | |||||| |||||||||||| ||  | ||||||||||||||||||    
T  479781 aaatgctagcaacacaaattttaataaacatttttcaaaacactttatttgattggttaaaattcacattgatcccaccaaatttatatgg 479871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 1473689 - 1473648
Alignment:
Q  216 atgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||||| |||  ||||||||||||||||||||||||||||    
T  1473689 atgggacccacatgatttggtggaacccatgtgaattttaac 1473648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 3150295 - 3150242
Alignment:
Q  204 caccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||||||||||||| | | |||  ||||||||| ||||||||||||||||||    
T  3150295 caccaaatttatatggaatccacatgatttggtgggacccatgtgaattttaac 3150242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 4483341 - 4483407
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaatt 192  Q
    ||||||||| ||||| ||| | ||| ||||| ||||||||||||||  |||||||||| ||||||||||    
T  4483341 atgagaaatactagcaacatacattttaacatacacttttcaacac--tctctttgattggttaaaatt 4483407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 34093948 - 34093908
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||||||||| | |||||||||| ||||||||||||    
T  34093948 acacacttttcaacataatctctttgattggttaaaattca 34093908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 8e-33; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 16458083 - 16457953
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||| || |||||||  ||| ||||||||||||||||||||||| |    
T  16458083 gagaaatgctagcaacacacattctaacacacacttttcaacacactctctttgatcgatt-aaattcatgtgagacccaccaaatttatatgggaccca 16457985  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
    ||  ||||| ||| | ||||||||||||||||    
T  16457984 catgatttgatgggatccatgtgaattttaac 16457953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 21433862 - 21433979
Alignment:
Q  140 acacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtgga 239  Q
    ||||| ||| ||||||||| ||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||||| |||| |||  |||||||||     
T  21433862 acacacattttaacacacatttttcaacacactctctttgattggttaaaattcacatgagacccaccaaatttatatgagacccacatgatttggtggg 21433961  T
Q  240 acccatgtgaattttaac 257  Q
    | ||||||||||||||||    
T  21433962 atccatgtgaattttaac 21433979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 257
Target Start/End: Complemental strand, 15134732 - 15134600
Alignment:
Q  125 tgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccg 224  Q
    |||| ||||||| | ||||| ||| |||| |||||||||||||||| | ||| |||| |||||||||||| |||  || ||||||||||||||||||||     
T  15134732 tgaggaatgctaacaacacacattttaacgcacacttttcaacacactgtctgtgattggttaaaattcacatgggactcaccaaatttatatgggaccc 15134633  T
Q  225 acaaaatttggtggaacccatgtgaattttaac 257  Q
    | |  |||| || | ||||||||||||||||||    
T  15134632 aaatgatttagtcggacccatgtgaattttaac 15134600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 2247569 - 2247685
Alignment:
Q  140 acacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtgga 239  Q
    ||||||||| ||||||||||||||||||||| ||||||| || | |||||||||| | || | ||| |||||||||||| |||| |||  |||||||||     
T  2247569 acacatattttaacacacacttttcaacacactctctttaattgattaaaattcacacgagatcca-caaatttatatgcgacccacatgatttggtggg 2247667  T
Q  240 acccatgtgaattttaac 257  Q
    | |||||| |||||||||    
T  2247668 atccatgttaattttaac 2247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 7403246 - 7403157
Alignment:
Q  127 agaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttata 216  Q
    |||||| ||||| ||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||| ||||  ||||  |||||||||    
T  7403246 agaaattctagcaacacatattttaacacacactattcaacacactctctttgattggttaaaattcacatgattcccatgaaatttata 7403157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 257
Target Start/End: Complemental strand, 31758817 - 31758720
Alignment:
Q  160 ttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||||||||||||||||||| | |||||||||  |||| |||||||||||||| ||| |||| |||  |||||||||| |  ||||||||||||||    
T  31758817 ttttcaacacattctctttgattgattaaaattcttatgagacccaccaaatttacatgagacccacatgatttggtggagcttatgtgaattttaac 31758720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 45653986 - 45654117
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggacc 223  Q
    |||| |||||||||| ||||| || |||||| ||||||||||||||| ||| |||||| |||| ||||| | |||| ||| | |||||||||||||||||    
T  45653986 atgataaatgctagcaacacacatcctaacagacacttttcaacacactct-tttgattggtt-aaatttatatgagacctatcaaatttatatgggacc 45654083  T
Q  224 gacaaaatttggtggaacccatgtgaattttaac 257  Q
     |||  ||||| ||| | ||||||||||||||||    
T  45654084 cacatgatttgatgggatccatgtgaattttaac 45654117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 3688735 - 3688603
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaaccca-ccaaatttatatgggaccg 224  Q
    ||||||||||| | ||||| ||| ||| | ||||||| ||||||| | |||||||| |||||||||||| |||  ||||| | ||| ||||||||||||     
T  3688735 gagaaatgctaacaacacacattttaatatacactttccaacacactttctttgattggttaaaattcacatgtgacccatctaaaattatatgggaccc 3688636  T
Q  225 acaaaatttggtggaacccatgtgaattttaac 257  Q
    |||  ||||||||  ||||||||||||||||||    
T  3688635 acatgatttggtgagacccatgtgaattttaac 3688603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 9024046 - 9023945
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    ||||||||||||||||||||||||||||  ||||||||| | |||  ||||||  ||||||||||||||  |||  ||||| ||| || |||||||||||    
T  9024046 acacacttttcaacacattctctttgatttgttaaaatttacatgggacccactcaatttatatgggactcacatgatttgttgggactcatgtgaattt 9023947  T
Q  254 ta 255  Q
    ||    
T  9023946 ta 9023945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 15134541 - 15134610
Alignment:
Q  125 tgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    |||||||||||||  ||||| ||| ||||||||| ||||||||||||||||||| || ||||||||||||    
T  15134541 tgagaaatgctagtaacacaaattttaacacacatttttcaacacattctcttttattggttaaaattca 15134610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 33414002 - 33414063
Alignment:
Q  150 taacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaat 211  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| ||| | ||||||||||    
T  33414002 taacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaccaaat 33414063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 48791211 - 48791291
Alignment:
Q  129 aaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaa 210  Q
    |||||||| | ||||||||| ||||||||||||| ||||||| ||||||| ||||||| ||||||| ||| |||||||||||    
T  48791211 aaatgctaccaacacatatt-taacacacactttccaacacactctctttaatcggttgaaattcatatggaacccaccaaa 48791291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 52374885 - 52374978
Alignment:
Q  119 tttatatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatt 212  Q
    |||||| ||| ||||||| | ||||| ||| ||||||||||||||||||||| |||||||||| | |||||||||| ||| | | |||||||||    
T  52374885 tttatacgaggaatgctaacaacacacattttaacacacacttttcaacacactctctttgatagattaaaattcacatggatctcaccaaatt 52374978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 38036371 - 38036270
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    |||||| ||| |||||||| ||||||||  ||||||||||| |||| ||||| ||||||||||||| ||| ||| ||||||  || || |||||||||||    
T  38036371 acacacattttaacacattgtctttgatttgttaaaattcacatgagacccaacaaatttatatggaacccacataatttg--gggactcatgtgaattt 38036274  T
Q  254 taac 257  Q
    ||||    
T  38036273 taac 38036270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 1338422 - 1338537
Alignment:
Q  140 acacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgaca-aaatttggtgg 238  Q
    ||||||||| ||||||||| ||||||||||  |||||||||| |||||||| ||| ||| | ||||||||| || ||||||||| | | ||||||| |||    
T  1338422 acacatattttaacacacatttttcaacac--tctctttgattggttaaaaatcacatggatcccaccaaa-ttgtatgggacccatataaatttgatgg 1338518  T
Q  239 aacccatgtgaattttaac 257  Q
    |||| |||||||| |||||    
T  1338519 aacctatgtgaatcttaac 1338537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 21434033 - 21433952
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaat 211  Q
    |||| |||| ||||| ||| ||||| ||||||||||||||| |||| ||||| |||||||||||| ||| | ||||||||||    
T  21434033 aatggtagcaacacacattttaacatacacttttcaacacactctcattgattggttaaaattcacatggatcccaccaaat 21433952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 33414153 - 33414036
Alignment:
Q  140 acacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtgga 239  Q
    ||||| ||| || |||||||| || |||||||  | |||||| | |||||||||| |||  ||||||||||||||||| ||||| ||   |||||||||     
T  33414153 acacacattatagcacacactattaaacacatcttatttgattgattaaaattcatatgggacccaccaaatttatataggacccacgtgatttggtggg 33414054  T
Q  240 acccatgtgaattttaac 257  Q
    | ||||||||||||||||    
T  33414053 atccatgtgaattttaac 33414036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 52375056 - 52374951
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaa 250  Q
    |||||||| ||||||| ||| ||| |||||| |||||||||||| ||   | ||| |||||||||| |||||| ||| |||||||||  | |||||||||    
T  52375056 aacacacatttttcaatacactctttttgattggttaaaattcacatttgatccatcaaatttatacgggacccacataatttggtgagatccatgtgaa 52374957  T
Q  251 ttttaa 256  Q
    ||||||    
T  52374956 ttttaa 52374951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 2324847 - 2324791
Alignment:
Q  201 acccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    ||||||||||||||||||||||| |||  |||||||| ||| |||||||||||||||    
T  2324847 acccaccaaatttatatgggacccacatgatttggtgaaactcatgtgaattttaac 2324791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 41840564 - 41840698
Alignment:
Q  122 atatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatggga 221  Q
    |||||||||||| |||| ||| | ||| ||||||| | ||||||||||| |||||||||| | |||||||| | |||    ||||||||||||||||  |    
T  41840564 atatgagaaatgttagcaacatacattttaacacatatttttcaacacactctctttgattgattaaaatttacatgggttccaccaaatttatatgtca 41840663  T
Q  222 ccgacaaaatttggtggaacccatgtgaattttaac 257  Q
     || |  ||||| ||||||| |||||||||||||||    
T  41840664 tcg-cttaatttagtggaactcatgtgaattttaac 41840698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 42516595 - 42516557
Alignment:
Q  140 acacatattctaacacacacttttcaacacattctcttt 178  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  42516595 acacatattttaacacacacttttcaacacattctcttt 42516557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 51578110 - 51578037
Alignment:
Q  183 ggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||||||||| ||| | |||||||||||| |||| ||||||||  | ||||||| ||||||||||||||||||    
T  51578110 ggttaaaattcacatgga-cccaccaaatttgtatgagaccgacacgaattggtgggacccatgtgaattttaac 51578037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 16577242 - 16577294
Alignment:
Q  140 acacatattctaacacacacttttcaacacattctctttgatcggttaaaatt 192  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||  |||||||||    
T  16577242 acacacattctaacacacatttttcaacacattctgtttgatttgttaaaatt 16577294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 31758690 - 31758730
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  31758690 acacacttttcaacacattctatttgattggttaaaattca 31758730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 29566106 - 29566051
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgat 181  Q
    ||||||||||||| |||| |||| ||||||| |||||||||||||| | |||||||    
T  29566106 gagaaatgctagcaacacgtattttaacacatacttttcaacacatccactttgat 29566051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 19382300 - 19382357
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaat 211  Q
    ||||||||| ||||||| ||| |||||| |||||||||||| ||| | ||||||||||    
T  19382300 acacactttccaacacactctatttgattggttaaaattcacatggatcccaccaaat 19382357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 34119639 - 34119688
Alignment:
Q  150 taacacacacttttcaacacattctctttgatcggttaaaattcaaatga 199  Q
    ||||||||| ||||||||||| ||  ||||||||||||||||||| ||||    
T  34119639 taacacacatttttcaacacactcgttttgatcggttaaaattcacatga 34119688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 993361 - 993293
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||||||| ||||| ||  ||||||||||||| ||||| | ||||||||||  |||| ||||||    
T  993361 gagaaatgctagcaacacacatcttaacacacactttccaacaaactctctttgatttgttagaattca 993293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 17181269 - 17181325
Alignment:
Q  201 acccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||||||||||||||| |||| ||   ||||||||| ||| ||||||||||||||    
T  17181269 acccaccaaatttatatgagacccacgtgatttggtgggacctatgtgaattttaac 17181325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 28987249 - 28987337
Alignment:
Q  129 aaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatat 217  Q
    |||||||| ||||||||||| ||||| | | ||||||||| | | | ||||||  ||| ||||||| ||||||| | ||||||||||||    
T  28987249 aaatgctatcgacacatattttaacatatatttttcaacatactttttttgatttgttgaaattcacatgaaactcgccaaatttatat 28987337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 41960554 - 41960597
Alignment:
Q  173 ctctttgatcggttaaaattcaaatgaaacccaccaaatttatat 217  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||    
T  41960554 ctctttcatcggttaaaattcacatg-aacccaccaaatttatat 41960597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 36480680 - 36480811
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggacc 223  Q
    ||||||||||||| | ||||| ||| |||||||| |||| ||||||| |||||||||| |||||||||||| |||  ||||| |||||||||||||||||    
T  36480680 atgagaaatgctaacaacacacattttaacacaccctttccaacacactctctttgattggttaaaattcacatgggacccaacaaatttatatgggacc 36480779  T
Q  224 gacaaaatttggtggaacccatgtgaatttta 255  Q
     |||  ||||||||| ||||||||||||||||    
T  36480780 cacatgatttggtgggacccatgtgaatttta 36480811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 14345126 - 14345257
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    |||||||| |||| ||||||||| ||||||| | ||||||||||| | |||||||| ||||||||| || |||| ||||||||||||||||||||||| |    
T  14345126 gagaaatgttagcaacacatattttaacacatatttttcaacacactttctttgattggttaaaatccacatgagacccaccaaatttatatgggaccca 14345225  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
    ||  ||||||||| |  |||||||||||||||    
T  14345226 catgatttggtgggattcatgtgaattttaac 14345257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 35357292 - 35357423
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    ||||||||||||| ||||| ||||||||| | | ||||||||||| |||||||||| |||||||| ||| |||  | ||||||||||||||||||||  |    
T  35357292 gagaaatgctagcaacacacattctaacaaatatttttcaacacactctctttgattggttaaaactcacatgtgaaccaccaaatttatatgggactta 35357391  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
    ||  ||||||| | ||||||||||||||||||    
T  35357392 catgatttggtaggacccatgtgaattttaac 35357423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 11532435 - 11532541
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaa 250  Q
    ||||||||||||  |||| | ||| |||||| ||| |||||||| |  | |||||| |||||||||||||| | |||  |||||||||||||||||||||    
T  11532435 aacacacactttctaacatactctttttgattggtcaaaattcacacaagacccactaaatttatatgggatccacatgatttggtggaacccatgtgaa 11532534  T
Q  251 ttttaac 257  Q
    |||||||    
T  11532535 ttttaac 11532541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 32881136 - 32881030
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaa 250  Q
    |||||||| ||||||||||| ||| ||| || |||||||||| | | || ||||||||||||||||||||| | |||  |||| |||| |||||||||||    
T  32881136 aacacacatttttcaacacaatcttttttattggttaaaatttacacgagacccaccaaatttatatgggatccacatgattttgtgggacccatgtgaa 32881037  T
Q  251 ttttaac 257  Q
    | |||||    
T  32881036 tattaac 32881030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 31205495 - 31205402
Alignment:
Q  164 caacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    ||||||| |||||||||| ||| |||||||| |||| ||||||||| ||||||||||||| |||  |||||||   |||||||| |||||||||    
T  31205495 caacacactctctttgattggtcaaaattcacatgagacccaccaattttatatgggacccacatgatttggtaagacccatgtaaattttaac 31205402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 40554177 - 40554072
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaa 250  Q
    |||||||| ||||||| ||| |||||||||| |||||||| ||| ||||   ||| |||||||||||||| |  |||  ||||||||| |||||||||||    
T  40554177 aacacacaattttcaatacactctctttgattggttaaaactcacatgagttccatcaaatttatatgggtctcacatgatttggtgggacccatgtgaa 40554078  T
Q  251 ttttaa 256  Q
    ||||||    
T  40554077 ttttaa 40554072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 37341359 - 37341257
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    ||||||||| ||||| | | | |||||| |||||||||||| ||| ||||||  ||||||||||| |||| |||  ||||||||| ||||||||||||||    
T  37341359 acacactttccaacatactttatttgattggttaaaattcacatgtaacccattaaatttatatgagacccacatgatttggtgg-acccatgtgaattt 37341261  T
Q  254 taac 257  Q
    ||||    
T  37341260 taac 37341257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 29955177 - 29955071
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaa 250  Q
    |||||||||||||||| ||| |||  |||||  ||||||||||| |||  | ||| ||||||||| ||||||| |||  ||||| ||| |||||||||||    
T  29955177 aacacacacttttcaatacactcttcttgattagttaaaattcatatgggatccatcaaatttatgtgggacccacatgatttgatgggacccatgtgaa 29955078  T
Q  251 ttttaac 257  Q
    |||||||    
T  29955077 ttttaac 29955071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 30004331 - 30004225
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaa 250  Q
    |||||||||||||||| ||| |||  |||||  ||||||||||| |||  | ||| ||||||||| ||||||| |||  ||||| ||| |||||||||||    
T  30004331 aacacacacttttcaatacactcttcttgattagttaaaattcatatgggatccatcaaatttatgtgggacccacatgatttgatgggacccatgtgaa 30004232  T
Q  251 ttttaac 257  Q
    |||||||    
T  30004231 ttttaac 30004225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 3901633 - 3901572
Alignment:
Q  150 taacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaat 211  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| |||   ||||||||||    
T  3901633 taacacacacttttcaacacactctctttgattggttaaaattcacatgggtcccaccaaat 3901572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 257
Target Start/End: Complemental strand, 19158788 - 19158692
Alignment:
Q  160 ttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    ||||||| ||| ||| ||||||  ||||||||||| ||||| |||||||||||||||||  ||| ||| ||||| |||| || |||||||||||||||    
T  19158788 ttttcaatacactctttttgattagttaaaattcatatgaa-cccaccaaatttatatgaaacccacataatttagtgggactcatgtgaattttaac 19158692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 1458515 - 1458593
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccac 206  Q
    ||||||||  ||| || |||||||||||||||| |||||||||||  ||||||||| |||| ||||||| |||| ||||||    
T  1458515 gagaaatgtcagcaacgcatattctaacacacaattttcaacaca--ctctttgattggttgaaattcatatgagacccac 1458593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 36480867 - 36480786
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaat 211  Q
    ||||||||| ||||| ||| |||||||||||||||||||   |||||||||| || ||||||||| |||   ||||||||||    
T  36480867 aatgctagcaacacacattttaacacacacttttcaacattctctctttgattggctaaaattcacatgggtcccaccaaat 36480786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 40763400 - 40763473
Alignment:
Q  183 ggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaa 256  Q
    |||||||||||| |||| | ||| ||||||||||||||| | |||  |||||||||||| || |||||||||||    
T  40763400 ggttaaaattcacatgagatccatcaaatttatatgggatccacatgatttggtggaactcaggtgaattttaa 40763473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 253
Target Start/End: Original strand, 45332557 - 45332646
Alignment:
Q  164 caacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    ||||||| | ||||| || |||||||||||| ||| || ||||||||||||||||||||| |||  |||||||   |||||||| |||||    
T  45332557 caacacactttctttaattggttaaaattcacatggaatccaccaaatttatatgggacccacatgatttggtcagacccatgtaaattt 45332646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 51541218 - 51541351
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggacc 223  Q
    ||||||||||||||| ||| |  |||||| | ||| ||||||| ||| | | |||||| |||||||| ||| |||  ||||||||||  ||||| |||||    
T  51541218 atgagaaatgctagcaacaaaccttctaatatacatttttcaatacactatttttgattggttaaaactcacatgtgacccaccaaaagtatataggacc 51541317  T
Q  224 gacaaaatttggtggaacccatgtgaattttaac 257  Q
     |||  ||||||||| || ||| |||||||||||    
T  51541318 cacatgatttggtgggactcatctgaattttaac 51541351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 799380 - 799308
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggacc 223  Q
    |||||||||||||||| || ||||||||||| |||||||||| | ||    |||||| |||||||||||||||    
T  799380 aacacacacttttcaatactttctctttgattggttaaaattgacataggtcccacctaatttatatgggacc 799308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 3300726 - 3300766
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattca 194  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  3300726 acacacattttaacacattctctttgatcggttaaaattca 3300766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 3901499 - 3901559
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaat 211  Q
    |||||| | |||||||||||||||||||||| |||||||||||| |||   ||||||||||    
T  3901499 aacacatatttttcaacacattctctttgattggttaaaattcacatgggtcccaccaaat 3901559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 26986272 - 26986336
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    |||| |||| ||||||||| ||||| | |||||||||||||||||| |||||  |||||||||||    
T  26986272 aatgttagcaacacatattttaacatatacttttcaacacattctccttgattagttaaaattca 26986336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 33244698 - 33244756
Alignment:
Q  160 ttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatg 218  Q
    ||||||||||||| | ||| || |||||||||||||||||  | |||||||||||||||    
T  33244698 ttttcaacacattattttttattggttaaaattcaaatgagtctcaccaaatttatatg 33244756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 36007515 - 36007446
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatga 199  Q
    |||| |||| ||||| ||| |||||  |||||||||||||||| |||||||  |||||||||||| ||||    
T  36007515 aatgttagcaacacacattttaacattcacttttcaacacattttctttgagtggttaaaattcacatga 36007446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 1458697 - 1458633
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||| | ||||| ||||||||| ||||||||||||||| |||  ||||| |||| |||||||    
T  1458697 aatgctaacaacacacattctaacaaacacttttcaacacactcttcttgattggtttaaattca 1458633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 37768459 - 37768530
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggacc 223  Q
    |||||||| ||||||||| ||||| |||| | |||||||||| | || || ||||||||||||||||| ||||    
T  37768459 aacacacatttttcaacatattctatttggt-ggttaaaatttacatcaatcccaccaaatttatatgagacc 37768530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 2276275 - 2276383
Alignment:
Q  149 ctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtg 248  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| ||| | ||||||||||||||| |||||| ||| |||||||||| |  ||||||    
T  2276275 ctaacacacacttttcaacacactctctttgattggttaaaattcacatggatcccaccaaatttataagggacccacataatttggtgggattcatgtg 2276374  T
Q  249 aattttaac 257  Q
    |||||||||    
T  2276375 aattttaac 2276383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 3235534 - 3235665
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    ||||||||||| | ||||| ||| ||||||||||||| ||| ||| |||||||||| |||||||||||| |||| ||||| |||||||| |||||||| |    
T  3235534 gagaaatgctaacaacacacattttaacacacactttccaatacactctctttgattggttaaaattcacatgagacccatcaaatttacatgggaccca 3235633  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
    || | || ||| | ||||||||||||||||||    
T  3235634 catatttgggtcggacccatgtgaattttaac 3235665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 12275715 - 12275844
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    ||||||||||||| ||||| ||||||||||||  ||| ||||||| ||||||  || |||||||| ||| |||  ||||||||||||||||||||||| |    
T  12275715 gagaaatgctagcaacacacattctaacacac--tttccaacacactctcttcaattggttaaaaatcacatgggacccaccaaatttatatgggaccca 12275812  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
    ||  ||||||||| |||||| |||||||||||    
T  12275813 catgatttggtgggacccatatgaattttaac 12275844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 5443503 - 5443635
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggacc 223  Q
    |||||||||| |||| ||| | ||||||||||||||||||||||||||||| ||||| |||||| |||||| ||   |||||| ||| |||||||||| |    
T  5443503 atgagaaatgttagcaacatacattctaacacacacttttcaacacattctgtttgaccggttagaattcacataggacccacaaaagttatatgggatc 5443602  T
Q  224 gacaaaatttggtggaacccatgtgaattttaac 257  Q
     ||| |||||||||| | | ||||||||||||||    
T  5443603 cacataatttggtgg-agctatgtgaattttaac 5443635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 5452548 - 5452680
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggacc 223  Q
    |||||||||| |||| ||| | ||||||||||||||||||||||||||||| ||||| |||||| |||||| ||   |||||| ||| |||||||||| |    
T  5452548 atgagaaatgttagcaacatacattctaacacacacttttcaacacattctgtttgaccggttagaattcacataggacccacaaaagttatatgggatc 5452647  T
Q  224 gacaaaatttggtggaacccatgtgaattttaac 257  Q
     ||| |||| ||||| | | ||||||||||||||    
T  5452648 cacataattgggtgg-agctatgtgaattttaac 5452680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 10056622 - 10056729
Alignment:
Q  150 taacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtga 249  Q
    ||||||| ||||||||||||| ||| |||||| ||| |||||||| ||| |||||||||| ||||||||||||| |||  |||||| || |||||| ||     
T  10056622 taacacatacttttcaacacactctttttgattggtcaaaattcacatggaacccaccaattttatatgggacccacatgatttggagggacccatatgg 10056721  T
Q  250 attttaac 257  Q
    ||||||||    
T  10056722 attttaac 10056729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 257
Target Start/End: Original strand, 40134391 - 40134492
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    |||||| ||| |||||| |||||||||| |||  ||||||| | |  ||| ||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  40134391 acacacattttaacacactctctttgattggt--aaattcacaggggacctaccaaatttatatgggacccacataatttggtgggacccatgtgaattt 40134488  T
Q  254 taac 257  Q
    ||||    
T  40134489 taac 40134492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 12275900 - 12275817
Alignment:
Q  128 gaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaat 211  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||| |||||| ||| |||||||||||| |||   ||||||||||    
T  12275900 gaaatgctagcaacacacattctaacacacactttccaacacactctcttcgattggttaaaattcatatgggtcccaccaaat 12275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 47497740 - 47497806
Alignment:
Q  191 ttcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    ||||||||| ||||||||||||| ||||||||| ||| |||||||||| || |||||||||||||||    
T  47497740 ttcaaatgagacccaccaaatttgtatgggacccacataatttggtgggactcatgtgaattttaac 47497806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 49107071 - 49107001
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    |||| |||||||| | ||| | ||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  49107071 atgaaaaatgctaccaacatacattctaacacacacttttcaacacactctctttgattggttaaaattca 49107001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 47497866 - 47497778
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatt 212  Q
    ||||||||| ||| | ||||| ||||||||||||| ||||||| | ||| |||||||| |||||||||||| ||||  |||||||||||    
T  47497866 atgagaaattctaacaacacacattctaacacacatttttcaatatattttctttgattggttaaaattcacatgagtcccaccaaatt 47497778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 257
Target Start/End: Original strand, 26862916 - 26863019
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    |||||| ||| |||||| |||| ||||| |||||||||||| |||  |  ||||| |||||||| ||||| |||  ||||||||| ||||||||||||||    
T  26862916 acacacattttaacacactctccttgattggttaaaattcacatgggattcaccatatttatataggacccacatgatttggtgggacccatgtgaattt 26863015  T
Q  254 taac 257  Q
    ||||    
T  26863016 taac 26863019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 31042115 - 31042182
Alignment:
Q  127 agaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    |||||||  ||| ||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||    
T  31042115 agaaatggcagcaacacatattttaacacacacttttcaatacattatctttgattggttaaaattca 31042182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 5443689 - 5443625
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||| ||||| ||||||||||||| ||||||||| | | |||||||| ||||||||||||    
T  5443689 aatgctagcaacacacattctaacacacatttttcaacatactttctttgattggttaaaattca 5443625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 5452734 - 5452670
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||| ||||| ||||||||||||| ||||||||| | | |||||||| ||||||||||||    
T  5452734 aatgctagcaacacacattctaacacacatttttcaacatactttctttgattggttaaaattca 5452670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 316523 - 316458
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaat 191  Q
    ||||||||||||  ||||  ||| ||||||||| |||||||||||||||||||||| || ||||||    
T  316523 gagaaatgctagttacacgcattttaacacacatttttcaacacattctctttgattggataaaat 316458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 18089753 - 18089808
Alignment:
Q  202 cccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||||||||||||||||  | ||| |||||||| | ||||||||||||||||||    
T  18089753 cccaccaaatttatatgggttccacataatttggttggacccatgtgaattttaac 18089808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 257
Target Start/End: Original strand, 49106909 - 49107011
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    ||||||||| |||||||  ||||||||| | |||||||||| |||   || |||||||||||||||  ||| ||  ||||||||| ||| ||||||||||    
T  49106909 acacactttccaacacacactctttgattgattaaaattcacatgggtcctaccaaatttatatggtcccg-catgatttggtgggacctatgtgaattt 49107007  T
Q  254 taac 257  Q
    ||||    
T  49107008 taac 49107011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 10056783 - 10056722
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaat 191  Q
    ||||||| | ||||| |||||||||| |||||||||||||| ||||||| ||  ||||||||    
T  10056783 aatgctaacaacacacattctaacacgcacttttcaacacactctctttaattagttaaaat 10056722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 26863073 - 26862992
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaat 211  Q
    ||||||||| ||||| ||| ||| |||||||||||| || | ||||||| || |||||||||||| |||   ||||||||||    
T  26863073 aatgctagcaacacacattttaatacacacttttcatcaaactctctttaattggttaaaattcacatgggtcccaccaaat 26862992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 11201382 - 11201326
Alignment:
Q  201 acccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    ||||| |||||||||||| |||| ||   ||||||||| ||||||||||||||||||    
T  11201382 acccatcaaatttatatgagacccacgtgatttggtgggacccatgtgaattttaac 11201326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 26647850 - 26647786
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||| ||| | ||||||| ||||||||||||||||| | | |||||| ||||| ||||||    
T  26647850 aatgctagcaacatacattctaatacacacttttcaacacactatttttgattggttagaattca 26647786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 144 - 257
Target Start/End: Original strand, 2542695 - 2542808
Alignment:
Q  144 atattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaaccc 243  Q
    ||||| ||||||||| ||||||||||| |||||||||| |||||||||| | ||||  |||||||||||||||||| ||| |||  ||||||||||| ||    
T  2542695 atattttaacacacatttttcaacacactctctttgattggttaaaatttacatgaggcccaccaaatttatatggaacccacatgatttggtggaagcc 2542794  T
Q  244 atgtgaattttaac 257  Q
    ||||||||||||||    
T  2542795 atgtgaattttaac 2542808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 251
Target Start/End: Complemental strand, 49822695 - 49822566
Alignment:
Q  123 tatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggac 222  Q
    |||||| ||||||||| ||||||||| ||||||||| ||||||||||| |||||||||| |||||||||||| ||| | |||| |||||||||| |||||    
T  49822695 tatgaggaatgctagcaacacatattataacacacatttttcaacacactctctttgattggttaaaattcacatggatcccatcaaatttatacgggac 49822596  T
Q  223 cgacaaaatttggt-ggaacccatgtgaat 251  Q
    | | | |||||||| || ||||||||||||    
T  49822595 ccatataatttggtggggacccatgtgaat 49822566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 7444445 - 7444333
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    |||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||| |||  ||| ||||||||||||||||||| |    
T  7444445 gagaaatgttagcaacacacattctaacaaacacttttcaacacattctctttgatgagttaaaattcacatgggacctaccaaatttatatgggaccca 7444346  T
Q  226 caaaatttggtgg 238  Q
    ||  |||||||||    
T  7444345 catgatttggtgg 7444333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 31970116 - 31970225
Alignment:
Q  147 ttctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatg 246  Q
    |||||||||||| ||||||||||| ||| |||||| |||||||||||| ||  |||||||||||||||||||||||| |||  ||||||||| ||||||     
T  31970116 ttctaacacacatttttcaacacactctttttgattggttaaaattcacattgaacccaccaaatttatatgggacccacatgatttggtgggacccata 31970215  T
Q  247 tgaattttaa 256  Q
    |||| |||||    
T  31970216 tgaaatttaa 31970225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 34437761 - 34437631
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    |||||| |||||| ||||| ||| |||||| |||||||||||||| |||||||||| |||||||||||| |||   ||| ||||| ||||||||| || |    
T  34437761 gagaaacgctagcaacacacattttaacacgcacttttcaacacactctctttgattggttaaaattcacatgggtccccccaaa-ttatatgggtccca 34437663  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
    ||  ||||||||| ||||||||||||||||||    
T  34437662 catgatttggtgggacccatgtgaattttaac 34437631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 257
Target Start/End: Complemental strand, 40669096 - 40668962
Alignment:
Q  121 tatatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatggg 220  Q
    |||||||||||||||||| ||||| ||| ||||||||  ||||||||||| |||||||||| |||||||||||| | |    ||||||||||||||||||    
T  40669096 tatatgagaaatgctagcaacacacattttaacacac--ttttcaacacactctctttgattggttaaaattcacacgggttccaccaaatttatatggg 40668999  T
Q  221 accgacaaaatttggtggaacccatgtgaattttaac 257  Q
     || ||| ||||| |||  |||||||||| |||||||    
T  40668998 tcccacataattttgtgagacccatgtgagttttaac 40668962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 257
Target Start/End: Complemental strand, 23318074 - 23317942
Alignment:
Q  123 tatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggac 222  Q
    |||||||||||||| | ||||||||| ||||||| | |||||||  ||  |||||| || |||||||||||| |||| | |||| |||||||||||||||    
T  23318074 tatgagaaatgctaccaacacatattataacacagatttttcaatcca--ctctttaattggttaaaattcacatgagatccactaaatttatatgggac 23317977  T
Q  223 cgacaaaatttggtggaacccatgtgaattttaac 257  Q
    | |||  ||||||||| ||| ||||||||||||||    
T  23317976 ccacatgatttggtgggacctatgtgaattttaac 23317942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 45563210 - 45563099
Alignment:
Q  146 attctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccat 245  Q
    |||||| | |||||||||||||||| | ||||||||||||||||||| | |||| | |||||||||||||||| || | |||  ||||||||| | ||||    
T  45563210 attctatcgcacacttttcaacacactttctttgatcggttaaaatttacatgagatccaccaaatttatatgagatcaacatgatttggtgggagccat 45563111  T
Q  246 gtgaattttaac 257  Q
    ||| ||||||||    
T  45563110 gtgcattttaac 45563099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 7444256 - 7444326
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaa 196  Q
    ||||||||||||| ||||| ||| ||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  7444256 gagaaatgctagcaacacacattttaacacacatttttcaacacattttctttaatcggttaaaattcaaa 7444326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 16661810 - 16661864
Alignment:
Q  146 attctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaa 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  16661810 attctaacacacatttttcaacacattctctttgatcggttaaaattcacatgaa 16661864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 731305 - 731436
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    ||||||||||||| | | | ||||||||||| | |||||||||||||   |||||| | |||||||||| |||| |  |||||||||||||||||||| |    
T  731305 gagaaatgctagcaatatacattctaacacatatttttcaacacatttattttgattgattaaaattcacatgagattcaccaaatttatatgggaccca 731404  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
    ||  ||||||||  || ||||| |||||||||    
T  731405 catgatttggtgcgactcatgtaaattttaac 731436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 38948240 - 38948145
Alignment:
Q  142 acatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtg 237  Q
    |||||||||||||||||||||| |||||| ||||||||||  |||| |||||| ||| |||||| |||| |||||| ||||| | | |||||||||    
T  38948240 acatattctaacacacactttttaacacactctctttgatttgttagaattcatatggaacccatcaaaattatatcggacccatataatttggtg 38948145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 257
Target Start/End: Complemental strand, 49403633 - 49403505
Alignment:
Q  129 aaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaa 228  Q
    ||||| |||| ||||||||| ||||  | | ||||||||||| | | ||| ||  ||||||||||| |||| ||||||||||||||||||| ||| |||     
T  49403633 aaatgttagcaacacatattttaacctatatttttcaacacacttttttttatttgttaaaattcacatgagacccaccaaatttatatggaacccacat 49403534  T
Q  229 aatttggtggaacccatgtgaattttaac 257  Q
    |||||| ||| ||  ||||||||||||||    
T  49403533 aatttgatgggacttatgtgaattttaac 49403505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 34437598 - 34437703
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaa 250  Q
    |||||||| ||||||||| | |||||||||| |||||||||||| |||   ||||||||| | || ||||||| | | ||||||| || |||||||||||    
T  34437598 aacacacatttttcaacaaactctctttgattggttaaaattcacatgggtcccaccaaa-tcatgtgggacccatataatttggggggacccatgtgaa 34437696  T
Q  251 ttttaac 257  Q
    |||||||    
T  34437697 ttttaac 34437703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 939499 - 939390
Alignment:
Q  125 tgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccg 224  Q
    |||||||||||||| | ||| ||| ||||| ||   |||||||||||| |||||||| |||||||||| | |||  || |||||||||||||||||| |     
T  939499 tgagaaatgctagcaagacacattttaacatacgtatttcaacacattatctttgattggttaaaatttacatgggacacaccaaatttatatgggatcc 939400  T
Q  225 acaaaatttg 234  Q
    ||| ||||||    
T  939399 acataatttg 939390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 257
Target Start/End: Original strand, 40374042 - 40374142
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    ||||||||||| ||||  ||||||||||||||||||||||| ||   || || ||||||||||||||||| |||  |||||||||   ||||||||||||    
T  40374042 acacacttttcgacac--tctctttgatcggttaaaattcacataggactcatcaaatttatatgggacccacatgatttggtgg-ggccatgtgaattt 40374138  T
Q  254 taac 257  Q
    ||||    
T  40374139 taac 40374142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 38663790 - 38663684
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaa 250  Q
    ||||| || ||||||||| | ||| ||| || |||||||||||| |||  ||||||||||||||||| ||||| | |  ||||||||| ||| |||||||    
T  38663790 aacacgcatttttcaacatactctttttaattggttaaaattcacatgggacccaccaaatttatataggacccatatgatttggtgggacctatgtgaa 38663691  T
Q  251 ttttaac 257  Q
    || ||||    
T  38663690 ttgtaac 38663684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 249
Target Start/End: Complemental strand, 45215466 - 45215368
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtga 249  Q
    |||||||||||||| ||||||||| |||||| | |||||||||| ||||   |||||||||||||| ||  || |||  ||||||||| || |||||||    
T  45215466 aacacacacttttcgacacattctttttgattgattaaaattcatatgagttccaccaaatttatacggatcctacatgatttggtgggactcatgtga 45215368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 21281461 - 21281521
Alignment:
Q  135 tagcgacacatattctaacacacacttttcaacacattc-tctttgatcggttaaaattca 194  Q
    |||| ||||||||| ||||| |||||||||||||||||| | |||||| ||||||||||||    
T  21281461 tagcaacacatattttaacatacacttttcaacacattcttttttgattggttaaaattca 21281521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 5695662 - 5695699
Alignment:
Q  135 tagcgacacatattctaacacacacttttcaacacatt 172  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  5695662 tagcaacacatattttaacacacacttttcaacacatt 5695699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 5695793 - 5695744
Alignment:
Q  172 tctctttgatcggttaaaattcaaatgaaacccaccaaatttatatggga 221  Q
    |||||||||| | |||||||||| |||| ||||| |||||||||||||||    
T  5695793 tctctttgattgtttaaaattcatatgagacccatcaaatttatatggga 5695744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 33422737 - 33422668
Alignment:
Q  184 gttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    ||||||||||| | ||  |||||||||||| ||||| ||| ||| |||||||||||| |||| |||||||    
T  33422737 gttaaaattcatacgagtcccaccaaatttgtatggaacccacataatttggtggaaaccatatgaattt 33422668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 45925108 - 45925213
Alignment:
Q  151 aacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaa 250  Q
    |||||||||||||||| ||| | | ||| || | |||||||| | ||| |  ||| ||||||||||||||||| ||| |||||||||  || ||| ||||    
T  45925108 aacacacacttttcaatacactttatttaattgattaaaattgatatggagtccatcaaatttatatgggacccacataatttggtgagactcatatgaa 45925207  T
Q  251 ttttaa 256  Q
    ||||||    
T  45925208 ttttaa 45925213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 939306 - 939377
Alignment:
Q  125 tgagaaatgctagcgacacatattctaacacacacttttcaacacat--tctctttgatcggttaaaattca 194  Q
    |||||||||||| | ||| | ||||||| |||||  |||||||||||  |||||||||| ||||||||||||    
T  939306 tgagaaatgctaacaacatacattctaatacacatatttcaacacatattctctttgattggttaaaattca 939377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 16257682 - 16257558
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaa 229  Q
    ||||||||| |||||| ||  |||||||| ||||||||||||| | ||||||  ||||||||| | |||   ||||||||||| | ||||| |   ||||    
T  16257682 aatgctagcaacacatttt--aacacacatttttcaacacattatttttgatatgttaaaattgacatgtgtcccaccaaattcacatgggtctatcaaa 16257585  T
Q  230 atttggtggaacccatgtgaattttaac 257  Q
    ||||  |||| |||||||||||||||||    
T  16257584 attt-ttggatcccatgtgaattttaac 16257558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 34783491 - 34783443
Alignment:
Q  146 attctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    |||||| ||||||||| |||||||| | |||||||| ||||||||||||    
T  34783491 attctagcacacacttctcaacacactatctttgattggttaaaattca 34783443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 40175893 - 40176000
Alignment:
Q  151 aacacacacttttcaacaca-ttctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtga 249  Q
    |||||||||||||||||||| || | ||| || |||||||||||| |||  | ||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  40175893 aacacacacttttcaacacactttttttttattggttaaaattcacatgggatccaccaaatttatatgggacccacataatttggtgggacccatgtga 40175992  T
Q  250 attttaac 257  Q
    ||||||||    
T  40175993 attttaac 40176000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 257
Target Start/End: Original strand, 40694589 - 40694719
Alignment:
Q  127 agaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgac 226  Q
    |||||||||||| |||||  || ||||||||| ||| ||||||| ||| |||||| |||||||||| | |||  ||||||||||| ||||| ||||| ||    
T  40694589 agaaatgctagcaacacacgttttaacacacattttacaacacaatctatttgattggttaaaattaacatgcgacccaccaaatctatataggacccac 40694688  T
Q  227 aaaatttggtggaacccatgtgaattttaac 257  Q
    |  ||||||||| ||||||||||||||||||    
T  40694689 atgatttggtgggacccatgtgaattttaac 40694719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 27072977 - 27072884
Alignment:
Q  128 gaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatggga 221  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||||| |||||| |||||||||| | ||   |||||||||||||||||||||    
T  27072977 gaaatactagcaacacatattttaacacacacttttcaacacattctttttgattggttaaaatttacattggacccaccaaatttatatggga 27072884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 2288763 - 2288632
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    ||||||||||||| ||||| ||||||| | |||||||||||||   |||||||||| |||||||||||| |||  | ||| ||||||||||||||||| |    
T  2288763 gagaaatgctagcaacacacattctaaaagacacttttcaacaatctctctttgattggttaaaattcacatgggatccatcaaatttatatgggaccca 2288664  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
        |||||||| ||||||||| |||||||||    
T  2288663 tgtgatttggtgaaacccatgtaaattttaac 2288632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 257
Target Start/End: Complemental strand, 40696351 - 40696221
Alignment:
Q  127 agaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgac 226  Q
    |||||||||||| |||||  || ||||||||| ||| ||||||| ||||||| || |||||||||| | |||  ||||||||||| ||||| | ||| ||    
T  40696351 agaaatgctagcaacacacgttttaacacacattttgcaacacaatctctttcattggttaaaattaacatgcgacccaccaaatctatatagaacccac 40696252  T
Q  227 aaaatttggtggaacccatgtgaattttaac 257  Q
    |  ||||||||| ||||||||||||||||||    
T  40696251 atgatttggtgggacccatgtgaattttaac 40696221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 34504386 - 34504483
Alignment:
Q  160 ttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    ||||||||||| ||| |||||| |||||||||||| ||| ||| |||||||||||||||||||| |||  ||||||||  ||||||| ||||||||||    
T  34504386 ttttcaacacactctttttgattggttaaaattcacatggaactcaccaaatttatatgggacccacatgatttggtgtgacccatgcgaattttaac 34504483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 35586547 - 35586437
Alignment:
Q  146 attctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccat 245  Q
    ||||||||||||||||||||||||||||||||| || | |||||||||| ||   |||||||||||||||||| |||  |||  ||||||||| | || |    
T  35586547 attctaacacacacttttcaacacattctctttaattgattaaaattcacataggacccaccaaatttatatgagactcacatgatttggtggga-ccgt 35586449  T
Q  246 gtgaattttaac 257  Q
    ||||||||||||    
T  35586448 gtgaattttaac 35586437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 20271177 - 20271044
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatga-----aacccaccaaatttatatggg 220  Q
    |||||||| |||| ||||| ||| |||||| |||||||||||||| ||||||||||  ||||||||||| ||||      |||||  |||||||||||||    
T  20271177 gagaaatgttagcaacacacattttaacacgcacttttcaacacactctctttgattagttaaaattcacatgatttgggacccataaaatttatatggg 20271078  T
Q  221 accgacaaaatttggtggaacccatgtgaatttt 254  Q
    ||| |||  ||||||||| | |||||||||||||    
T  20271077 acccacatgatttggtgggatccatgtgaatttt 20271044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 254
Target Start/End: Complemental strand, 21057805 - 21057672
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatga-----aacccaccaaatttatatggg 220  Q
    |||||||| |||| ||||| ||| |||||| |||||||||||||| ||||||||||  ||||||||||| ||||      |||||  |||||||||||||    
T  21057805 gagaaatgttagcaacacacattttaacacgcacttttcaacacactctctttgattagttaaaattcacatgatttgggacccataaaatttatatggg 21057706  T
Q  221 accgacaaaatttggtggaacccatgtgaatttt 254  Q
    ||| |||  ||||||||| | |||||||||||||    
T  21057705 acccacatgatttggtgggatccatgtgaatttt 21057672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 257
Target Start/End: Original strand, 26018476 - 26018566
Alignment:
Q  165 aacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||| |||| ||||| ||||||||||||   || ||||||||||||||||||||||| ||| |||||| ||| ||||||||||||||||||    
T  26018476 aacacactctcgttgattggttaaaattcac--gagacccaccaaatttatatgggacccacataatttgatgggacccatgtgaattttaac 26018566  T

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Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 4994317 - 4994188
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccga 225  Q
    |||||| |||||| ||||| ||| ||||||||| |||| ||||||  ||||||||| ||||||||||   |||| |||||| |||||||||||||||| |    
T  4994317 gagaaacgctagcaacacacattttaacacacaatttttaacaca--ctctttgattggttaaaatttgtatgagacccacaaaatttatatgggaccca 4994220  T
Q  226 caaaatttggtggaacccatgtgaattttaac 257  Q
    ||  ||||||||| || |||  ||||||||||    
T  4994219 catgatttggtgggactcataagaattttaac 4994188  T

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Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 36009982 - 36009900
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatt 212  Q
    ||||||||| ||| | ||| ||||||||||||| ||||||| |||||||| | |||||||||||| |||| ||||||||||||    
T  36009982 aatgctagcaacaaacattttaacacacactttccaacacactctctttggttggttaaaattcacatgacacccaccaaatt 36009900  T

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Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 2288565 - 2288640
Alignment:
Q  117 tttttatatgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaatt 192  Q
    |||| ||||| | ||||| ||| |||||||||||||||||||||||  |||||| |||||||||| ||||||||||    
T  2288565 ttttaatatgtggaatgccagcaacacatattctaacacacactttcgaacacactctctttgattggttaaaatt 2288640  T

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Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 38357543 - 38357629
Alignment:
Q  125 tgagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaat 211  Q
    |||| ||||||||| ||||| |||||| |||||||||| ||||||| ||||||||||  ||| ||| ||| |||| |||||||||||    
T  38357543 tgaggaatgctagcaacacacattctagcacacactttccaacacactctctttgattagttgaaactcacatgagacccaccaaat 38357629  T

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Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 38835132 - 38835035
Alignment:
Q  160 ttttcaacacattctcttt--gatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaatttta 255  Q
    |||||||||||||||||||  ||| |||||||||||| ||  || | |||||||||||||||||||  ||  ||||||||  ||||||||||||||||    
T  38835132 ttttcaacacattctctttttgattggttaaaattcacatagaatctaccaaatttatatgggacccgcatgatttggtgagacccatgtgaatttta 38835035  T

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Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 36009845 - 36009893
Alignment:
Q  124 atgagaaatgctagcgacacatattctaacacacacttttcaacacatt 172  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  36009845 atgagaaatgctagcaacacacattctaacacacactttccaacacatt 36009893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 40176034 - 40175927
Alignment:
Q  150 taacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgaca-aaatttggtggaacccatgtg 248  Q
    |||||||||||||| |||||| ||  ||| || |||||||||||| |||   ||||||||||| || |||| || | | |||||||||||| ||||||||    
T  40176034 taacacacactttttaacacactccttttaattggttaaaattcacatgggtcccaccaaatt-atgtgggtcccatataaatttggtggatcccatgtg 40175936  T
Q  249 aattttaac 257  Q
    |||||||||    
T  40175935 aattttaac 40175927  T

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Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 2171133 - 2171031
Alignment:
Q  156 acacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgaca-aaatttggtggaacccatgtgaatttt 254  Q
    |||| ||| |||||| ||| ||| || |||||||||||   || | ||||||||||||||||||| |||||| || |||||||| || ||||| ||||||    
T  2171133 acacattttaacacactctttttaattggttaaaattcgcttggaccccaccaaatttatatgggtccgacataattttggtgggacacatgtaaatttt 2171034  T
Q  255 aac 257  Q
    |||    
T  2171033 aac 2171031  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 21124958 - 21125055
Alignment:
Q  158 acttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaa 256  Q
    ||||||| ||||| ||| |||||| |||||||||||| ||| || ||| ||||||||||||||| | |||  ||||| ||  |||||||| ||||||||    
T  21124958 acttttcgacacactct-tttgattggttaaaattcatatggaatccatcaaatttatatgggatccacatgatttgatgagacccatgtaaattttaa 21125055  T

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Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 42072637 - 42072720
Alignment:
Q  126 gagaaatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaat 211  Q
    ||||||||||||| || || ||| ||||||||||  ||||||||| |||||||||| |||||| ||||| |||   ||||||||||    
T  42072637 gagaaatgctagcaacgcacattttaacacacac--ttcaacacactctctttgattggttaacattcacatgggtcccaccaaat 42072720  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 42072767 - 42072693
Alignment:
Q  183 ggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattttaac 257  Q
    |||||||||| | |||  |||||||||||||||||| |||| | |  ||||||||| |||||||||||| |||||    
T  42072767 ggttaaaatttacatgggacccaccaaatttatatgagacccatatgatttggtgggacccatgtgaatgttaac 42072693  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 8402636 - 8402578
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaa 190  Q
    ||||||||| ||||| ||| |||||||||||||||||||||  || |||||| ||||||||    
T  8402636 aatgctagcaacacacattttaacacacacttttcaacaca--ctatttgattggttaaaa 8402578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 13772542 - 13772489
Alignment:
Q  141 cacatattctaacacacacttttcaacacattctctttgatcggttaaaattca 194  Q
    |||| ||| ||||||| |||||| ||||||||||||||||| | ||||||||||    
T  13772542 cacacattttaacacaaacttttaaacacattctctttgattgattaaaattca 13772489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 30262769 - 30262826
Alignment:
Q  162 ttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgg 219  Q
    ||||||||||||| ||| || |||||||||| | ||||  ||||||||||||||||||    
T  30262769 ttcaacacattcttttttattggttaaaatttatatgagtcccaccaaatttatatgg 30262826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 257
Target Start/End: Original strand, 8402483 - 8402584
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaacccatgtgaattt 253  Q
    |||||||||||||||||  ||||||||| | |||||||||| |||   |||| |||||| ||||||| || |||  |||||||||  |||||| || |||    
T  8402483 acacacttttcaacaca--ctctttgattgtttaaaattcacatgggtcccaacaaattaatatgggtcccacatgatttggtggggcccatgagagttt 8402580  T
Q  254 taac 257  Q
    ||||    
T  8402581 taac 8402584  T

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Target: scaffold0137 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 8320 - 8228
Alignment:
Q  150 taacacacacttttcaacacattctctttgatcggttaaaattcaaatgaaacccaccaaatttatatgggaccgacaaaatttggtggaaccc 243  Q
    |||||||||||||||||| |||||| |||||| || ||||||||| ||||| ||||||||| |||| ||||||| |||  ||||||||| ||||    
T  8320 taacacacacttttcaacgcattctttttgattggctaaaattcacatgaatcccaccaaa-ttatgtgggacccacatgatttggtgggaccc 8228  T

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Target: scaffold0620 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 9282 - 9242
Alignment:
Q  154 acacacttttcaacacattctctttgatcggttaaaattca 194  Q
    ||||||||||||||| | |||||||||| ||||||||||||    
T  9282 acacacttttcaacataatctctttgattggttaaaattca 9242  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 136481 - 136421
Alignment:
Q  130 aatgctagcgacacatattctaacacacacttttcaacacattctctttgatcggttaaaa 190  Q
    ||||||||| | ||| ||| ||||||||| ||||||||||| ||| |||||| ||||||||    
T  136481 aatgctagcaatacacattttaacacacatttttcaacacactctttttgattggttaaaa 136421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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