View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11807_high_7 (Length: 390)
Name: NF11807_high_7
Description: NF11807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11807_high_7 |
 |  |
|
Alignment Details
Target: chr8 (Bit Score: 361; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 7 - 375
Target Start/End: Original strand, 29156620 - 29156988
Alignment:
| Q |
7 |
caagtttgcttttgtgtatgataattcatcggagacatataaggttgtaatgttattgttggatgtatttgaaaatagaactcatgtgcaagttttaagt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29156620 |
caagtttgcttttgtgtatgataattcatcggagacatataaggttgtaatgttattgttggatgtatttgaaaatagaactcatgtgcaagttttaagt |
29156719 |
T |
 |
| Q |
107 |
gtggcagacaatgtttgaaaaactattccagattttcccgcggttcctcttcctaatatatataccggtcagggtgggagtgatggtgtgtatttgaatg |
206 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29156720 |
gtggcagacaatgtttggaaaactattccagattttcccgcggttcctcttcctaatatatataccggtcagggtgggagtgatggtgtgtatttgaatg |
29156819 |
T |
 |
| Q |
207 |
gtcgtcttaattggttggccattcaagatcgtcccgttagtgttgatgttgatgtttgggaggatattgaggctaaggaatttgtcattgtttcacttga |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29156820 |
gtcgtcttaattggttggccattcaagatcgtcccgttagtgttgatgttgatgtttgggaggatattgaggctaaggaatttgtcattgtttcacttga |
29156919 |
T |
 |
| Q |
307 |
tgtggaaacagagtcatacacacagttgatgcctccctgtgcttttgatgaaatgtcatctattaagcc |
375 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29156920 |
tgtggaaacagagtcatacacacagttgatgtctccctgtgcttttgatgaaatgtcatctattaagcc |
29156988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 233; Significance: 1e-128; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 7 - 375
Target Start/End: Original strand, 2580890 - 2581258
Alignment:
| Q |
7 |
caagtttgcttttgtgtatgataattcatcggagacatataaggttgtaatgttattgttggatgtatttgaaaatagaactcatgtgcaagttttaagt |
106 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| ||||||||||| |||||||| | |
|
|
| T |
2580890 |
caagtttgcttttgtttatgataattcatcggagacatataagcttgtaatgttaatgttggatgtagttgaaaataaaactcatgtgcgagttttaaat |
2580989 |
T |
 |
| Q |
107 |
gtggcagacaatgtttgaaaaactattccagattttcccgcggttcctcttcctaatatatataccggtcagggtgggagtgatggtgtgtatttgaatg |
206 |
Q |
| |
|
||| | || |||||||| ||||||||| || ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
2580990 |
gtgactgataatgtttggaaaactatttcaaattttccggcggttcctcttcctaatatatatactggtcagggtgggagtgatggtgtgtatttaaatg |
2581089 |
T |
 |
| Q |
207 |
gtcgtcttaattggttggccattcaagatcgtcccgttagtgttgatgttgatgtttgggaggatattgaggctaaggaatttgtcattgtttcacttga |
306 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||| ||||||||||| ||||||| ||||| ||||||| |||||||| ||||||||||||| |
|
|
| T |
2581090 |
gtcgtcttaattggttggccattcaggatcgtcctgttagtgatgatgttgatggttgggagaatattaaggctaatgaatttgttgttgtttcacttga |
2581189 |
T |
 |
| Q |
307 |
tgtggaaacagagtcatacacacagttgatgcctccctgtgcttttgatgaaatgtcatctattaagcc |
375 |
Q |
| |
|
| ||| ||| | |||||||| |||||||||||||| |||| ||||||||||||||||||| ||||||| |
|
|
| T |
2581190 |
tctggggacaaaatcatacacgcagttgatgcctccatgtggttttgatgaaatgtcatctgttaagcc |
2581258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 2595579 - 2595947
Alignment:
| Q |
1 |
acattgcaagtttgcttttgtgtatgataattcatcggagacatataaggttgtaatgttattgttggatgtatttgaaaatagaactcatgtgcaagtt |
100 |
Q |
| |
|
||||| ||||||| ||||||| |||||||||||||||||||| |||||||||||| ||||| ||||||||||| || |||||||||||||||||||||| |
|
|
| T |
2595579 |
acattacaagtttacttttgtttatgataattcatcggagacgtataaggttgtattgttaatgttggatgtagttcaaaatagaactcatgtgcaagta |
2595678 |
T |
 |
| Q |
101 |
ttaagtgtggcagacaatgtttgaaaaactattccagattttcccgcggttcctcttcctaatatatataccggtcagggtgggagtgatggtgtgtatt |
200 |
Q |
| |
|
|||| |||||| || |||||||| |||||||||||| ||||||| |||||||||||||||||| ||| || |||||||||||| |||||||||||||| |
|
|
| T |
2595679 |
ttaaatgtggctgataatgtttggaaaactattccaaattttcctgcggttcctcttcctaatcaatacactggtcagggtgggtctgatggtgtgtatt |
2595778 |
T |
 |
| Q |
201 |
tgaatggtcgtcttaattggttggccattcaagatcgtcccgttagtgttgatgttgatgtttgggaggatattgaggctaaggaatttgtcattgtttc |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
2595779 |
tgaatggtcgtcttaattggttggccattcagaatcgtcctgttag------tgttgatggttgggagaatattaaggctaaggaatttgtcattgtttc |
2595872 |
T |
 |
| Q |
301 |
acttgatgtggaaacagagtcatacacacagttgatgcctccctgtgcttttgatgaaatgtcatctattaagcc |
375 |
Q |
| |
|
|||| || ||| ||| ||||| ||||| |||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
2595873 |
actttatatgggaacggagtcgtacacgcagttgatgcctccctctggttttgatgaaatgtcatctattaagcc |
2595947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 4 - 375
Target Start/End: Original strand, 2576457 - 2576822
Alignment:
| Q |
4 |
ttgcaagtttgcttttgtgtatgataattcatcggagacatataaggttgtaatgttattgttggatgtatttgaaaatagaactcatgtgcaagtttta |
103 |
Q |
| |
|
||||||||| || ||| | |||||| |||| || ||||| |||||||||||| ||||| |||||||||| ||||||||| |||||| |||| |||||| |
|
|
| T |
2576457 |
ttgcaagttcgcgtttctttatgatgattcttcagagacttataaggttgtattgttaaagttggatgtagttgaaaataaaactcacgtgcgagttttt |
2576556 |
T |
 |
| Q |
104 |
agtgtggcagacaatgtttgaaaaactattccagattttcccgcggttcctcttcctaatatatataccggtcagggtgggagtgatggtgtgtatttga |
203 |
Q |
| |
|
|||||||| || |||| ||| |||||||||||| ||||||| || ||||||||||||||| |||||| | ||||||||||||| ||||||||||||||| |
|
|
| T |
2576557 |
agtgtggctgataatgcttggaaaactattccaaattttcctgcagttcctcttcctaatcgatatactgatcagggtgggagtcatggtgtgtatttga |
2576656 |
T |
 |
| Q |
204 |
atggtcgtcttaattggttggccattcaagatcgtcccgttagtgttgatgttgatgtttgggaggatattgaggctaaggaatttgtcattgtttcact |
303 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||||| ||||||| ||| ||| ||||||| ||||| || ||||||||||||||||||||||||| |
|
|
| T |
2576657 |
atggtagtcttaattggttggccattcaggatcgtcctgttagtg----tgt--atggttgggagaatattaagtctaaggaatttgtcattgtttcact |
2576750 |
T |
 |
| Q |
304 |
tgatgtggaaacagagtcatacacacagttgatgcctccctgtgcttttgatgaaatgtcatctattaagcc |
375 |
Q |
| |
|
|||| ||| |||| |||| ||||||||||||||||||||| || ||||||||||| ||||||| ||||||| |
|
|
| T |
2576751 |
tgatatgggaacaaagtcgcacacacagttgatgcctccctctggttttgatgaaacgtcatctgttaagcc |
2576822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 26 - 375
Target Start/End: Original strand, 2588534 - 2588872
Alignment:
| Q |
26 |
gataattcatcggagacatataaggttgtaatgttattgttggatgtatttgaaaatagaactcatgtgcaagttttaagtgtggcagacaatgtttgaa |
125 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| || || |||||||| | |
|
|
| T |
2588534 |
gataattcatcgaaaacatataaggttgtaatgttaatgttggatgtagttgaaaatagaactcatgtgcgagttttaagtgtcgctgataatgtttgga |
2588633 |
T |
 |
| Q |
126 |
aaactattccagattttcccgcggttcctcttcctaatatatataccggtcagggtgggagtgatggtgtgtatttgaatggtcgtcttaattggttggc |
225 |
Q |
| |
|
|||| ||| || ||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2588634 |
aaacaatttcaaattttcctgcggttcctcttcctgatagatatactggtcagggtgggagtgatggtgtgtatttgaatggtaatcttaattggttggc |
2588733 |
T |
 |
| Q |
226 |
cattcaagatcgtcccgttagtgttgatgttgatgtttgggaggatattgaggctaaggaatttgtcattgtttcacttgatgtggaaacagagtcatac |
325 |
Q |
| |
|
||| ||| |||| || |||||| | | ||||| ||||| || |||| |||||||| |||||||||||||| || ||||| |||||| |
|
|
| T |
2588734 |
cat---------tcctgtta--attagtgttgacggtcgggagaatattaagcctaatgaatttgttgttgtttcacttgatcagggcacagaatcatac |
2588822 |
T |
 |
| Q |
326 |
acacagttgatgcctccctgtgcttttgatgaaatgtcatctattaagcc |
375 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||||||||||| | ||||||| |
|
|
| T |
2588823 |
acgcagttgatgcctccctgtggttttgatgaaatgtcatatgttaagcc |
2588872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 374
Target Start/End: Original strand, 30398696 - 30399063
Alignment:
| Q |
1 |
acattgcaagtttgcttttgtgtatgataattcatcggagacatataaggttgtaatgttattgttggatgtatttgaaaatagaactcatgtgcaagtt |
100 |
Q |
| |
|
||||| ||||||| ||||||| ||||| ||||||||| |||| |||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||| |
|
|
| T |
30398696 |
acattacaagttttcttttgtttatgacaattcatcgaagacgtataaggttgtaatgttaatgttggatgcagttgaaaatagaactcatgtgcgagtt |
30398795 |
T |
 |
| Q |
101 |
ttaagtgtggcagacaatgtttgaaaaactattccagattttcccgcggttcctcttcctaatatatataccggtcagggtgggagtgatggtgtgtatt |
200 |
Q |
| |
|
||||||||||| | |||||||| |||||||||||| |||||| |||||||||||||||| | |||||| ||||| |||| | ||||||||||||||| |
|
|
| T |
30398796 |
ttaagtgtggctaataatgtttggaaaactattccaaattttcatgcggttcctcttcctactcgatatactggtcaaggtgagtgtgatggtgtgtatt |
30398895 |
T |
 |
| Q |
201 |
tgaatggtcgtcttaattggttggccattcaagatcgtcccgttagtgttgatgttgatgtttgggaggatattgaggctaaggaatttgtcattgtttc |
300 |
Q |
| |
|
||| ||||||||||||||||||||||||||| |||||||| ||||| |||| ||| ||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
30398896 |
tgattggtcgtcttaattggttggccattcaggatcgtcctgttag------tgtttatggttgggagaatattaaggctaaggaatttgtcattgtttc |
30398989 |
T |
 |
| Q |
301 |
acttgatgtggaaacagagtcatacacacagttgatgcctccctgtgcttttgatgaaatgtcatctattaagc |
374 |
Q |
| |
|
||||||| ||| |||||||| |||| || |||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
30398990 |
acttgatatgggaacagagttgtacatgcaaatgatgcctccctctggttttgatgaaatgtcatctattaagc |
30399063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 145; Significance: 3e-76; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 7 - 364
Target Start/End: Original strand, 46768949 - 46769303
Alignment:
| Q |
7 |
caagtttgcttttgtgtatgataattcatcggagacatataaggttgtaatgttattgttggatgtatttgaaaatagaactcatgtgcaagttttaagt |
106 |
Q |
| |
|
||||||||| |||| | |||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| |
|
|
| T |
46768949 |
caagtttgcctttggttttgataattcatcggagacttataaggttgtaatgttaacgttggatgtagttgaaaatagaactcatgtgcaagttttgagt |
46769048 |
T |
 |
| Q |
107 |
gtggcagacaatgtttgaaaaactattccagattttcccgcggttcctcttcctaatatatataccggtcagggtgggagtgatggtgtgtatttgaatg |
206 |
Q |
| |
|
|||| || ||| |||| | |||||||| | |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
46769049 |
gtgggtgataatatttggagaactattcaaagttttcctgcggttcctcttcctaattgctataaaaatcagggtgggagtgatggtgtgtatttgaatg |
46769148 |
T |
 |
| Q |
207 |
gtcgtcttaattggttggccattcaagatcgtcccgttagtgttgatgttgatgtttg--ggaggatattgaggctaaggaatttgtcattgtttcactt |
304 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||||||| ||| ||| | |||| ||||| ||||||||||||||| |||||||||||| |
|
|
| T |
46769149 |
gtcgtcttaattggttggccattcaggatcgtcttgttagtgtttatg-----gttgggaggagaatattaaggctaaggaatttgcgattgtttcactt |
46769243 |
T |
 |
| Q |
305 |
gatgtggaaacagagtcatacacacagttgatgcctccctgtgcttttgatgaaatgtca |
364 |
Q |
| |
|
|| ||||||| | |||| ||| | |||||||||||| ||| |||||||||||||||| |
|
|
| T |
46769244 |
tatacggaaacaaaatcattcacgcggttgatgcctcctcgtggttttgatgaaatgtca |
46769303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 375
Target Start/End: Original strand, 36260106 - 36260196
Alignment:
| Q |
285 |
aatttgtcattgtttcacttgatgtggaaacagagtcatacacacagttgatgcctccctgtgcttttgatgaaatgtcatctattaagcc |
375 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||| || | |||||||||||||||| ||||| |||| |
|
|
| T |
36260106 |
aatttgtgattgtttcacttgatctggaaacagagacatacacaaagttgatgcctccttgcggttttgatgaaatgtcacctattgagcc |
36260196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 36254946 - 36255162
Alignment:
| Q |
8 |
aagtttgcttttgtgtatgataattcatcggagacatataaggttgtaatgttattgttggatgtatttgaaaatagaactcatgtgcaagttttaagtg |
107 |
Q |
| |
|
|||||||| |||| ||| |||||||||| ||||| ||||||||||| |||||| | ||||||| || ||||||||||| | |||||| |||| ||| |
|
|
| T |
36254946 |
aagtttgcgtttggttattataattcatcagagacttataaggttgtgatgttaattttggatgatgttaaaaatagaactgacgtgcaaactttatgtg |
36255045 |
T |
 |
| Q |
108 |
tggcagacaatgtttgaaaaactattccagattttcccgcggttcctcttcctaatatatataccggtcagggtgggagtgatggtgtgtatttgaatgg |
207 |
Q |
| |
|
|| | |||||||| ||| |||||| | ||||||| || |||| ||||||| | | |||| ||| |||| || ||||||||||||||||||||| |
|
|
| T |
36255046 |
tgtgtaataatgtttggaaacctattcaaaattttcctgctgttcttcttccttttgt-gatactagtcctggtgtgaatgatggtgtgtatttgaatgg |
36255144 |
T |
 |
| Q |
208 |
tcgtcttaattggttggc |
225 |
Q |
| |
|
| || ||||||||||||| |
|
|
| T |
36255145 |
tagttttaattggttggc |
36255162 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 364
Target Start/End: Original strand, 36262901 - 36262985
Alignment:
| Q |
280 |
taaggaatttgtcattgtttcacttgatgtggaaacagagtcatacacacagttgatgcctccctgtgcttttgatgaaatgtca |
364 |
Q |
| |
|
|||||| ||||| ||||||||| ||||| | | ||||||| ||||||||||| |||||||| |||| |||||||||||||||| |
|
|
| T |
36262901 |
taaggactttgtgattgtttcatttgatctaggaacagagacatacacacagccaatgcctccgtgtggttttgatgaaatgtca |
36262985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 36255214 - 36255294
Alignment:
| Q |
280 |
taaggaatttgtcattgtttcacttgatgtggaaacagagtcatacacacagttgatgcctccctgtgcttttgatgaaat |
360 |
Q |
| |
|
|||||| ||||| |||||| | |||||| ||| ||||||| ||||||| ||| |||||||||| ||| |||||||||||| |
|
|
| T |
36255214 |
taaggactttgtgattgttgcgcttgatctgggaacagagacatacacgcagctgatgcctccgcgtggttttgatgaaat |
36255294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 20495542 - 20495580
Alignment:
| Q |
187 |
tgatggtgtgtatttgaatggtcgtcttaattggttggc |
225 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
20495542 |
tgatggtgtgtatttgaatggtagtctgaattggttggc |
20495580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 36262632 - 36262685
Alignment:
| Q |
8 |
aagtttgcttttgtgtatgataattcatcggagacatataaggttgtaatgtta |
61 |
Q |
| |
|
|||||||| |||| |||||||||||||| ||||| ||||||||||| |||||| |
|
|
| T |
36262632 |
aagtttgcatttggttatgataattcatcagagacttataaggttgtgatgtta |
36262685 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 21621204 - 21621143
Alignment:
| Q |
313 |
aacagagtcatacacacagttgatgcctccctgtgcttttgatgaaatgtcatctattaagc |
374 |
Q |
| |
|
|||||||| ||||| |||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
21621204 |
aacagagttgtacacgcagttgatgcctccctctggttttgatgaaatgtcatctattaagc |
21621143 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 21642874 - 21642813
Alignment:
| Q |
313 |
aacagagtcatacacacagttgatgcctccctgtgcttttgatgaaatgtcatctattaagc |
374 |
Q |
| |
|
|||||||| ||||| |||||||||||||||| || ||| |||||||||||||||||||||| |
|
|
| T |
21642874 |
aacagagttgtacacgcagttgatgcctccctttggtttggatgaaatgtcatctattaagc |
21642813 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 375
Target Start/End: Original strand, 19358985 - 19359080
Alignment:
| Q |
280 |
taaggaatttgtcattgtttcacttgatgtggaaacagagtcatacacacagttgatgcctccctgtgcttttgatgaaatgtcatctattaagcc |
375 |
Q |
| |
|
|||| ||||||| ||||||||||||||| || |||| || |||||||| ||||||||||||| |||| |||| |||| |||||| ||||||||| |
|
|
| T |
19358985 |
taagaaatttgtgattgtttcacttgattagggaacaaagacatacacaaagttgatgcctccttgtggtttttatgacatgtcacttattaagcc |
19359080 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 19358725 - 19358806
Alignment:
| Q |
23 |
tatgataattcatcggagacatataaggttgtaatgttattgttggatgtatttgaaaatagaactcatgtgcaagttttaa |
104 |
Q |
| |
|
|||||||| |||||| |||| ||||||||||| |||||| | ||||||| | |||||| ||||||| || || |||||||| |
|
|
| T |
19358725 |
tatgataactcatcgcagacttataaggttgtgatgttacttttggatgaagctgaaaacagaactcgtgcgcgagttttaa |
19358806 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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