View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11807_low_16 (Length: 258)

Name: NF11807_low_16
Description: NF11807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11807_low_16
NF11807_low_16
[»] chr3 (19 HSPs)
chr3 (20-247)||(34659094-34659321)
chr3 (60-185)||(31150905-31151031)
chr3 (60-166)||(22775531-22775638)
chr3 (73-186)||(11659591-11659706)
chr3 (87-162)||(19954376-19954451)
chr3 (53-158)||(52724111-52724216)
chr3 (60-169)||(49629683-49629793)
chr3 (95-187)||(4155383-4155476)
chr3 (87-167)||(21809064-21809145)
chr3 (87-187)||(35038353-35038453)
chr3 (127-187)||(54368575-54368636)
chr3 (132-187)||(16926918-16926974)
chr3 (87-192)||(16239645-16239752)
chr3 (87-162)||(20303309-20303384)
chr3 (137-187)||(54567951-54568002)
chr3 (111-169)||(37246801-37246859)
chr3 (143-187)||(1723056-1723101)
chr3 (87-187)||(27670317-27670417)
chr3 (127-192)||(31317282-31317352)
[»] chr8 (21 HSPs)
chr8 (87-187)||(20301320-20301421)
chr8 (87-187)||(21087952-21088053)
chr8 (74-187)||(41790717-41790831)
chr8 (87-187)||(8084186-8084287)
chr8 (87-169)||(7669497-7669579)
chr8 (87-187)||(3157483-3157584)
chr8 (87-207)||(31197654-31197774)
chr8 (30-166)||(18004197-18004332)
chr8 (52-166)||(26208137-26208252)
chr8 (87-192)||(12317100-12317206)
chr8 (95-187)||(24532353-24532446)
chr8 (87-166)||(31079499-31079578)
chr8 (127-169)||(5932148-5932190)
chr8 (132-183)||(27439516-27439568)
chr8 (60-187)||(39052826-39052954)
chr8 (87-185)||(20094719-20094818)
chr8 (90-187)||(37001285-37001386)
chr8 (127-187)||(11232158-11232219)
chr8 (127-187)||(11232393-11232454)
chr8 (87-187)||(12688131-12688232)
chr8 (143-187)||(34842737-34842782)
[»] chr5 (19 HSPs)
chr5 (87-187)||(17150392-17150493)
chr5 (74-187)||(15480381-15480495)
chr5 (87-187)||(18333623-18333724)
chr5 (87-187)||(95425-95526)
chr5 (87-187)||(43117706-43117807)
chr5 (124-187)||(2063695-2063759)
chr5 (63-166)||(9368676-9368779)
chr5 (66-180)||(25258204-25258319)
chr5 (66-180)||(25321994-25322109)
chr5 (87-192)||(26137268-26137375)
chr5 (87-187)||(41666916-41667018)
chr5 (87-187)||(24528599-24528700)
chr5 (137-187)||(6919403-6919454)
chr5 (87-178)||(6413581-6413673)
chr5 (87-169)||(24270029-24270112)
chr5 (87-169)||(24346660-24346743)
chr5 (137-166)||(17352642-17352671)
chr5 (79-209)||(17423785-17423917)
chr5 (127-171)||(30770234-30770278)
[»] chr2 (17 HSPs)
chr2 (87-185)||(2029830-2029929)
chr2 (74-187)||(24395922-24396036)
chr2 (87-166)||(34893506-34893585)
chr2 (132-192)||(5594081-5594141)
chr2 (87-178)||(16533380-16533472)
chr2 (87-185)||(16419328-16419427)
chr2 (85-187)||(40379366-40379469)
chr2 (87-187)||(14466334-14466435)
chr2 (88-160)||(37828782-37828854)
chr2 (40-187)||(40149113-40149261)
chr2 (87-187)||(5711598-5711700)
chr2 (127-187)||(93318-93379)
chr2 (111-187)||(15124731-15124808)
chr2 (60-169)||(2375060-2375169)
chr2 (85-169)||(38629919-38630004)
chr2 (87-159)||(18607168-18607240)
chr2 (87-166)||(19110323-19110403)
[»] chr4 (26 HSPs)
chr4 (87-187)||(40717365-40717466)
chr4 (87-187)||(35796901-35797002)
chr4 (87-190)||(4905660-4905764)
chr4 (91-165)||(7926410-7926484)
chr4 (63-187)||(6218263-6218388)
chr4 (87-187)||(22231232-22231333)
chr4 (87-183)||(28245685-28245782)
chr4 (52-187)||(30305333-30305470)
chr4 (98-166)||(49190114-49190182)
chr4 (63-185)||(6666535-6666658)
chr4 (95-166)||(22445533-22445604)
chr4 (95-162)||(27634248-27634315)
chr4 (87-187)||(35788718-35788820)
chr4 (137-187)||(30530136-30530187)
chr4 (53-108)||(41853514-41853569)
chr4 (60-187)||(50543462-50543592)
chr4 (113-190)||(13555427-13555505)
chr4 (147-204)||(18528441-18528499)
chr4 (60-185)||(21646399-21646524)
chr4 (87-169)||(36686065-36686147)
chr4 (74-166)||(7572618-7572710)
chr4 (143-207)||(9685437-9685502)
chr4 (87-187)||(14783111-14783212)
chr4 (87-187)||(35819052-35819153)
chr4 (62-98)||(4455680-4455716)
chr4 (87-166)||(40716544-40716624)
[»] chr7 (23 HSPs)
chr7 (60-187)||(33834250-33834378)
chr7 (60-187)||(25620195-25620323)
chr7 (60-166)||(31485556-31485662)
chr7 (45-166)||(1596674-1596795)
chr7 (87-192)||(21861348-21861454)
chr7 (132-192)||(21821860-21821921)
chr7 (87-187)||(36277150-36277251)
chr7 (97-207)||(2404342-2404453)
chr7 (95-166)||(36993240-36993311)
chr7 (87-166)||(44874502-44874581)
chr7 (131-169)||(20305368-20305406)
chr7 (52-187)||(33996203-33996336)
chr7 (87-187)||(10882163-10882264)
chr7 (87-187)||(29469664-29469765)
chr7 (132-207)||(4506971-4507047)
chr7 (87-186)||(22574661-22574761)
chr7 (85-144)||(36575093-36575152)
chr7 (87-203)||(3519963-3520081)
chr7 (113-190)||(9689050-9689128)
chr7 (87-187)||(4886388-4886489)
chr7 (87-187)||(34027452-34027553)
chr7 (137-169)||(11743106-11743138)
chr7 (60-203)||(48661452-48661596)
[»] scaffold0692 (1 HSPs)
scaffold0692 (87-187)||(5678-5779)
[»] chr1 (20 HSPs)
chr1 (87-166)||(4112699-4112778)
chr1 (113-207)||(38733190-38733285)
chr1 (87-187)||(30369894-30369995)
chr1 (85-187)||(26176967-26177070)
chr1 (87-187)||(39348276-39348377)
chr1 (82-168)||(52961426-52961512)
chr1 (87-187)||(35772088-35772189)
chr1 (87-166)||(2859551-2859630)
chr1 (112-166)||(26346918-26346972)
chr1 (87-212)||(31496295-31496421)
chr1 (95-187)||(4098335-4098428)
chr1 (85-169)||(5953658-5953743)
chr1 (113-191)||(32783231-32783310)
chr1 (87-187)||(33156792-33156894)
chr1 (87-187)||(4112930-4113031)
chr1 (120-169)||(17402660-17402709)
chr1 (60-157)||(25713248-25713345)
chr1 (87-187)||(51589865-51589966)
chr1 (52-101)||(52676398-52676447)
chr1 (85-169)||(5109328-5109412)
[»] scaffold0045 (1 HSPs)
scaffold0045 (95-185)||(41138-41229)
[»] chr6 (10 HSPs)
chr6 (87-166)||(6237631-6237710)
chr6 (87-187)||(12330103-12330204)
chr6 (87-187)||(13353260-13353361)
chr6 (87-187)||(33796385-33796486)
chr6 (87-187)||(4868736-4868838)
chr6 (95-187)||(33494598-33494691)
chr6 (87-207)||(2736325-2736447)
chr6 (87-165)||(6542867-6542945)
chr6 (87-187)||(9705079-9705181)
chr6 (143-207)||(27653256-27653321)
[»] scaffold0048 (1 HSPs)
scaffold0048 (130-212)||(81876-81959)
[»] scaffold0129 (1 HSPs)
scaffold0129 (87-187)||(14362-14463)
[»] scaffold0092 (1 HSPs)
scaffold0092 (113-236)||(5665-5789)
[»] scaffold0400 (1 HSPs)
scaffold0400 (89-187)||(3904-4003)
[»] scaffold0365 (1 HSPs)
scaffold0365 (89-187)||(4548-4647)
[»] scaffold0519 (1 HSPs)
scaffold0519 (127-187)||(1975-2036)
[»] scaffold0083 (1 HSPs)
scaffold0083 (60-165)||(51355-51460)
[»] scaffold0005 (1 HSPs)
scaffold0005 (87-187)||(56518-56619)


Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 20 - 247
Target Start/End: Original strand, 34659094 - 34659321
Alignment:
Q  20 ttctcaaccaatgtgggacttcttaacacagtctcacgctcaacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaaccta 119  Q
    ||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||    
T  34659094 ttctcaatcaatgtgggacttcttaacatagtctcacgctctacactatttggtttggtgcatggatataaatgatgggtggtccgatagtggaaactta 34659193  T
Q  120 atggcatgtggtccaacggatcttgaagaggctctgataccatcttaaaatcgtagttgagcctaacaaaatcttataaaaccgacttataagatggaga 219  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  34659194 atagcatgtggtccaacggatcttgaagaggctctgataccatcttaaaatcgtagttgagcctaacaaaattttataaaatcgacttataaggtggaga 34659293  T
Q  220 ttaaccgcacttgtaaatatttgttcat 247  Q
    ||||||||||||||||||| ||||||||    
T  34659294 ttaaccgcacttgtaaatacttgttcat 34659321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 185
Target Start/End: Complemental strand, 31151031 - 31150905
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatctt-gaagaggctctgata 158  Q
    |||||||||| || |||||||||||||||||||| || |||  ||||||  | ||||||||| ||| |||| |||||||||||| || ||||||||||||    
T  31151031 caacactattgggcttggtgcatgtatataaatggtgagtgacccgataacggaaacctaatagcaagtggcccaacggatcttggaggaggctctgata 31150932  T
Q  159 ccatcttaaaatcgtagttgagcctaa 185  Q
    |||||||| ||||  ||||| ||||||    
T  31150931 ccatcttataatctgagttgggcctaa 31150905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 22775531 - 22775638
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaag-aggctctgata 158  Q
    |||||||||| || |||||||||| ||||||||| ||||||| |||||||   ||||||||| ||| |||| ||||  |||||||||| |||||||||||    
T  22775531 caacactattgggattggtgcatggatataaatggtgggtggcccgatagcagaaacctaatagcaggtggcccaatagatcttgaaggaggctctgata 22775630  T
Q  159 ccatctta 166  Q
    ||||||||    
T  22775631 ccatctta 22775638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 186
Target Start/End: Original strand, 11659591 - 11659706
Alignment:
Q  73 tttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatctt-gaagaggctctgataccatctta-aaat 170  Q
    ||||| ||||| | ||||||| ||||||||||||||| |||||||| || ||| || |||||||||||||| || |||||||| |||| |||||| | ||    
T  11659591 tttggagcatggacataaatggtgggtggtccgatagcgaaaacctgatagcaggttgtccaacggatcttggaggaggctctaatacgatcttagacat 11659690  T
Q  171 cgtagttgagcctaac 186  Q
    ||| |||||| |||||    
T  11659691 cgtggttgagtctaac 11659706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 19954376 - 19954451
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccat 162  Q
    ||||||| ||||||||| ||||| |||||||| || |||  ||| |||| ||||||||||||||||||||||||||    
T  19954376 ataaatggtgggtggtcagatagcgaaaacctgatagcagatggcccaatggatcttgaagaggctctgataccat 19954451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 52724111 - 52724216
Alignment:
Q  53 tcacgctcaacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggct 152  Q
    ||||| ||||||||||   ||||||| |||| | ||||||| ||||||| ||||||| |||||||| || |||||||  |||| | || |||||||||||    
T  52724111 tcacgatcaacactatcgagtttggttcatggacataaatggtgggtggcccgatagcgaaaacctgatagcatgtgacccaatgaatgttgaagaggct 52724210  T
Q  153 ctgata 158  Q
    ||||||    
T  52724211 ctgata 52724216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 49629793 - 49629683
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatggg-tggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgata 158  Q
    |||||||||| || |||||  ||| | ||||||| |||| || ||||||||   |||||| || ||| ||||||||| |||||||||||||||||| |||    
T  49629793 caacactattgggcttggtttatggacataaatggtgggatgctccgatagcagaaacctgatagcaggtggtccaatggatcttgaagaggctctaata 49629694  T
Q  159 ccatcttaaaa 169  Q
    |||| ||||||    
T  49629693 ccattttaaaa 49629683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 187
Target Start/End: Complemental strand, 4155476 - 4155383
Alignment:
Q  95 tgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    ||||||| ||||||| | |||||| || ||| |||| |||| | |||||| |||| |||||||||||||||| ||||||| |||| ||||||||    
T  4155476 tgggtggcccgatagcggaaacctgatagcaggtggcccaatgaatcttggagagactctgataccatcttagaaatcgtggttgggcctaaca 4155383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 21809064 - 21809145
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaa-gaggctctgataccatcttaa 167  Q
    ||||||||||||| ||||||||| | |||||| || ||| |||  |||| ||||||||||  ||||||||||||||||||||    
T  21809064 ataaatgatgggtagtccgatagcggaaacctgatagcaggtgacccaatggatcttgaaccaggctctgataccatcttaa 21809145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 35038353 - 35038453
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||||| | |||||| || ||| |||| |||| |||||||| |||||| |||||||||||||| || |||| |||| ||||||    
T  35038353 ataaatggtgggtgg-ccgatagcggaaacctgattgcaggtggcccaatggatcttggagaggcactgataccatcttagaagtcgtggttgggcctaa 35038451  T
Q  186 ca 187  Q
    ||    
T  35038452 ca 35038453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 54368636 - 54368575
Alignment:
Q  127 gtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||| |||| | ||||||    
T  54368636 gtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggtctaaca 54368575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 16926918 - 16926974
Alignment:
Q  132 ccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    |||| ||||||||||||| |||||||||||||||| ||||||| ||||||| |||||    
T  16926918 ccaatggatcttgaagagactctgataccatcttagaaatcgtggttgagcttaaca 16926974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 16239752 - 16239645
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaag-aggctctgataccatctta-aaatcgtagttgagccta 184  Q
    ||||||| |||||||  |||||  | |||||| || ||| |||| | ||||||||||| || ||||||||||||||||||| ||||||| |||| |||||    
T  16239752 ataaatggtgggtggctcgataacggaaacctgatagcaggtggccaaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggccta 16239653  T
Q  185 acaaaatc 192  Q
    ||| ||||    
T  16239652 acacaatc 16239645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 20303309 - 20303384
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccat 162  Q
    ||||||| ||||||| ||||||||| |||||| || ||| |||| |||| |||| ||  |||||||||||||||||    
T  20303309 ataaatggtgggtggaccgatagtggaaacctgatagcaggtggcccaatggattttagagaggctctgataccat 20303384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 54568002 - 54567951
Alignment:
Q  137 ggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    |||||||| ||||||||||||||||||||| ||||||| |||| ||||||||    
T  54568002 ggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaaca 54567951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 37246801 - 37246859
Alignment:
Q  111 gaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatcttaaaa 169  Q
    ||||||||||| ||| ||||||||| | |||||||| || || ||||||||||||||||    
T  37246801 gaaaacctaatagcaggtggtccaatgaatcttgaatagactttgataccatcttaaaa 37246859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 1723056 - 1723101
Alignment:
Q  143 tgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||||    
T  1723056 tgaagaggctctgataccatcttagaaatcgtggttgggcctaaca 1723101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 27670317 - 27670417
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatcttaaaatcgtagttgagcctaac 186  Q
    |||||||| |||||||||||||  | |||||| ||  || ||||||||| | | |  ||||||||||||||||||| ||| ||| || |||| |||||||    
T  27670317 ataaatgacgggtggtccgataacggaaacctgataacaggtggtccaaagaaacgcgaagaggctctgataccatattagaatggtggttgggcctaac 27670416  T
Q  187 a 187  Q
    |    
T  27670417 a 27670417  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 31317352 - 31317282
Alignment:
Q  127 gtggtccaacggatcttg-aagaggctctgatacca---tctta-aaatcgtagttgagcctaacaaaatc 192  Q
    |||||||||||||||||| ||||| |||||||||||   ||||| ||||||| ||||||||||||| ||||    
T  31317352 gtggtccaacggatcttggaagagactctgataccaccatcttagaaatcgtggttgagcctaacacaatc 31317282  T

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Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 20301421 - 20301320
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||||||||||| | |||||| || ||| |||| |||| |||||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  20301421 ataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaa 20301322  T
Q  186 ca 187  Q
    ||    
T  20301321 ca 20301320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 21088053 - 21087952
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||||||||||| | |||||| || ||| |||| |||| |||||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  21088053 ataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaa 21087954  T
Q  186 ca 187  Q
    ||    
T  21087953 ca 21087952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 187
Target Start/End: Complemental strand, 41790831 - 41790717
Alignment:
Q  74 ttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcg 172  Q
    ||||| |||| | ||||||| |||||||  |||||| | |||||| || ||| |||| |||| |||||||||||||||||||||||||||||| ||||||    
T  41790831 ttggttcatggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcg 41790732  T
Q  173 tagttgagcctaaca 187  Q
    | |||| ||||||||    
T  41790731 tggttgggcctaaca 41790717  T

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Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 8084287 - 8084186
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| |||||| ||| |||| |||||||| || |||||||| |||| |||||||| ||||||||||||||||||||| ||||||| |||| | ||||    
T  8084287 ataaatggtgggtgatccaatagcgaaaacctgatagcatgtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggtctaa 8084188  T
Q  186 ca 187  Q
    ||    
T  8084187 ca 8084186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 7669579 - 7669497
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatcttaaaa 169  Q
    ||||||| ||||||||||||||||| |||||| || ||| ||||  ||| ||||||||||||| || ||||||||||||||||    
T  7669579 ataaatggtgggtggtccgatagtggaaacctgatagcaggtggctcaatggatcttgaagagactttgataccatcttaaaa 7669497  T

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Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 3157483 - 3157584
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||  ||||||| |||||||| || ||| ||||||||| |||| ||| ||||||||||||| ||||||| |||| || |||||||||||    
T  3157483 ataaatggtgggtgtcccgatagcgaaaacctgatagcaggtggtccaatggattttggagaggctctgatatcatcttataaatggtggttgagcctaa 3157582  T
Q  186 ca 187  Q
    ||    
T  3157583 ca 3157584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 31197774 - 31197654
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||||||||||| | |||||| || ||| |||| |||| |||||| | ||||||||||||||||||||| ||||| | |||| ||||||    
T  31197774 ataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatctcggagaggctctgataccatcttagaaatc-tggttgggcctaa 31197676  T
Q  186 caaaatcttataaaaccgactt 207  Q
    || || | || |||||||||||    
T  31197675 cacaaccctacaaaaccgactt 31197654  T

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Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 18004197 - 18004332
Alignment:
Q  30 atgtgggacttcttaacacagtctcacgctcaacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtg 129  Q
    |||||||||| ||||||||   ||||||  || ||||||| || ||||| | || | ||||||| ||||||| ||||||| | |||||| || ||| |||    
T  18004197 atgtgggact-cttaacaccccctcacgaccagcactattaggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtg 18004295  T
Q  130 gtccaacggatcttgaagaggctctgataccatctta 166  Q
    | |||| |||||||| |||||||||||||||||||||    
T  18004296 gcccaatggatcttggagaggctctgataccatctta 18004332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 166
Target Start/End: Original strand, 26208137 - 26208252
Alignment:
Q  52 ctcacgctcaacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatctt-gaagagg 150  Q
    ||||||| |||||||||| |  ||||  |||| ||||||||| ||||||| ||| ||| |||||||| || ||| |||| |||||||||||| ||  |||    
T  26208137 ctcacgcacaacactattagacttggcacatgaatataaatggtgggtggcccgttagggaaaacctgatagcaggtggcccaacggatcttagagaagg 26208236  T
Q  151 ctctgataccatctta 166  Q
    ||||||||||||||||    
T  26208237 ctctgataccatctta 26208252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 12317206 - 12317100
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||||||||||||||||||  | |||||| ||  || |||| |||| | ||| ||||||| |||||||||||||||| ||||||| |||| ||||||    
T  12317206 ataaatgatgggtggtccgataacggaaacctgataacaggtggcccaaagaatcgtgaagagtctctgataccatcttagaaatcgtggttgggcctaa 12317107  T
Q  186 caaaatc 192  Q
    || ||||    
T  12317106 cacaatc 12317100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 187
Target Start/End: Original strand, 24532353 - 24532446
Alignment:
Q  95 tgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    ||||||| ||||||| | |||||| || ||| |||| |||| ||||||||||| |||||||||||||||||| ||||| | |||| ||||||||    
T  24532353 tgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgaaggggctctgataccatcttagaaatcatggttgggcctaaca 24532446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 31079499 - 31079578
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta 166  Q
    ||||||| ||||||| ||||||||| ||| || ||  |||||||||||| |||||||| ||||| | |||||||||||||    
T  31079499 ataaatggtgggtggcccgatagtggaaatctgataacatgtggtccaatggatcttgtagaggttttgataccatctta 31079578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 5932148 - 5932190
Alignment:
Q  127 gtggtccaacggatcttgaagaggctctgataccatcttaaaa 169  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  5932148 gtggtccaatggatcttggagaggctctgataccatcttaaaa 5932190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 27439516 - 27439568
Alignment:
Q  132 ccaacggatcttgaagaggctctgataccatcttaaaa-tcgtagttgagcct 183  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||||||||    
T  27439516 ccaacggatcttagagagactctgataccatcttaaaactcgtagttgagcct 27439568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 39052826 - 39052954
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgatac 159  Q
    |||||||||| || ||||| | || | ||||||| ||||||| | ||||| | |||||| || ||| | || | || |||||||| ||||||||| ||||    
T  39052826 caacactattgggcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcagggggccaaatggatcttggagaggctctaatac 39052925  T
Q  160 catctta-aaatcgtagttgagcctaaca 187  Q
    ||||||| ||||||| |||| ||||||||    
T  39052926 catcttagaaatcgttgttgggcctaaca 39052954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 20094719 - 20094818
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| | ||||| |||||||| || | | |||| |||| ||||||||||||  ||||||||||| |||| ||||||| |||| ||||||    
T  20094719 ataaatggtgggtggcctgatagcgaaaacctgataggaggtggcccaatggatcttgaagaaactctgataccaacttataaatcgtggttgggcctaa 20094818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 37001386 - 37001285
Alignment:
Q  90 aatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttga---agaggctctgataccatc-ttaaaatcgtagttgagcctaa 185  Q
    |||||||||||| ||||||| | |||||| |  ||| |||| |||| |||||||||   |||||||||||||||||| || ||||||| |||| ||||||    
T  37001386 aatgatgggtggcccgatagcggaaacctgacagcaggtggcccaatggatcttgatgaagaggctctgataccatctttgaaatcgtggttgggcctaa 37001287  T
Q  186 ca 187  Q
    ||    
T  37001286 ca 37001285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 11232158 - 11232219
Alignment:
Q  127 gtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    |||| |||| |||||||| ||||||||||||||||||||| |||| || |||| ||||||||    
T  11232158 gtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaaca 11232219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 11232393 - 11232454
Alignment:
Q  127 gtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    |||| |||| |||||||| ||||||||||||||||||||| |||| || |||| ||||||||    
T  11232393 gtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaaca 11232454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 12688232 - 12688131
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| || ||||   |||||| || ||| |||| |||| |||||||||||||||||| ||| ||||||| |||||||  ||||| ||||    
T  12688232 ataaatggtgggtggcccaatagaagaaacctgatagcaggtggcccaatggatcttgaagaggctctaatatcatcttagaaatcgtgtttgagtctaa 12688133  T
Q  186 ca 187  Q
    ||    
T  12688132 ca 12688131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 34842782 - 34842737
Alignment:
Q  143 tgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||    
T  34842782 tgaagaggctctgataccatattagaaatcgtggttgagcctaaca 34842737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 17150392 - 17150493
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctt-aaaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||||| | |||||| || | | |||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17150392 ataaatggtgggtggcccgatagcggaaacctgatagtaggtggcccaatggatcttgaagaggctctgataccatcttaaaaatcgtagttgagcctaa 17150491  T
Q  186 ca 187  Q
    ||    
T  17150492 ca 17150493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 187
Target Start/End: Complemental strand, 15480495 - 15480381
Alignment:
Q  74 ttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcg 172  Q
    ||||| |||| | ||||||| ||||||| || |||| | |||||| || ||| |||| |||| |||||||||||||||||||||||||||||| ||||||    
T  15480495 ttggttcatggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcg 15480396  T
Q  173 tagttgagcctaaca 187  Q
    | |||| ||||||||    
T  15480395 tggttgggcctaaca 15480381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 18333623 - 18333724
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||||| |||||||| || ||| |||| || | |||||||||||||||||||||||||||||| || |||| |||| ||||||    
T  18333623 ataaatggtgggtggcccgatagcgaaaacctgatagcaggtggcccgatggatcttgaagaggctctgataccatcttagaattcgtggttgggcctaa 18333722  T
Q  186 ca 187  Q
    ||    
T  18333723 ca 18333724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 95425 - 95526
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||| | | |||||| || ||| |||| |||| |||||||| ||||||||||||||||||||| ||||||| |||| ||||||    
T  95425 ataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaa 95524  T
Q  186 ca 187  Q
    ||    
T  95525 ca 95526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 43117807 - 43117706
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||||||||||||||||||| | |||||| || ||| |||| ||||  ||||||| | |||||||||||| |||||| ||||||| |||| ||||||    
T  43117807 ataaatgatgggtggtccgatagcggaaacctgatagcaggtggcccaatagatcttggaaaggctctgatactatcttagaaatcgttgttgggcctaa 43117708  T
Q  186 ca 187  Q
    ||    
T  43117707 ca 43117706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 2063695 - 2063759
Alignment:
Q  124 catgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  2063695 catgtgatccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaaca 2063759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 9368779 - 9368676
Alignment:
Q  63 cactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccat 162  Q
    ||||||| |||||||| | || | ||| ||| |||||||||| |||| | |||||| || ||| |||| |||| |||||||||||||||||||||||||     
T  9368779 cactattgggtttggttcgtggacatacatggtgggtggtccaatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccac 9368680  T
Q  163 ctta 166  Q
    ||||    
T  9368679 ctta 9368676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 25258204 - 25258319
Alignment:
Q  66 tatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctt 165  Q
    ||||||| ||||| | || | ||||||  ||||||||||||||| | |||||| || ||| |||| |||| |||||||| ||| ||||||||||||||||    
T  25258204 tatttggcttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatctt 25258303  T
Q  166 a-aaatcgtagttgag 180  Q
    | ||||||| ||||||    
T  25258304 agaaatcgtggttgag 25258319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 180
Target Start/End: Original strand, 25321994 - 25322109
Alignment:
Q  66 tatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctt 165  Q
    ||||||| ||||| | || | ||||||  ||||||||||||||| | |||||| || ||| |||| |||| |||||||| ||| ||||||||||||||||    
T  25321994 tatttggcttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatctt 25322093  T
Q  166 a-aaatcgtagttgag 180  Q
    | ||||||| ||||||    
T  25322094 agaaatcgtggttgag 25322109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 192
Target Start/End: Original strand, 26137268 - 26137375
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaag-aggctctgataccatctta-aaatcgtagttgagccta 184  Q
    ||||||||||||||| ||||| |||||||||| || ||| |||| |||||  |||||| || |||||||||||||| |||| ||||||| |||| |||||    
T  26137268 ataaatgatgggtggcccgatggtgaaaacctgatagcaggtggcccaacaaatcttggagtaggctctgataccaccttagaaatcgtggttgggccta 26137367  T
Q  185 acaaaatc 192  Q
    ||| ||||    
T  26137368 acataatc 26137375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 41666916 - 41667018
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatctt-gaagaggctctgataccatctta-aaatcgtagttgagccta 184  Q
    ||||||| ||||||| ||||||  | |||||| || ||| |||| |||||||||||| || |||||||||||||||||||| ||||||| |||| |||||    
T  41666916 ataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggccta 41667015  T
Q  185 aca 187  Q
    |||    
T  41667016 aca 41667018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 24528700 - 24528599
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| |||||||| ||||| |  ||| ||||| ||| ||||||||| ||||| || ||||||||||||||||||||| ||||| | |||| ||||||    
T  24528700 ataaatgttgggtggttcgataatagaaaactaatagcaggtggtccaatggatcatggagaggctctgataccatcttagaaatcatggttgggcctaa 24528601  T
Q  186 ca 187  Q
    ||    
T  24528600 ca 24528599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 6919403 - 6919454
Alignment:
Q  137 ggatcttgaagaggctctgataccatctt-aaaatcgtagttgagcctaaca 187  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  6919403 ggatcttgaagaggctttgataccatcttaaaaatcgtggttgagcctaaca 6919454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 6413581 - 6413673
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttg 178  Q
    ||||||| |||||||  |||||||| | |||| || ||| |||| |||| |||||||||||||||| ||||||||| ||| ||||||| ||||    
T  6413581 ataaatggtgggtggctcgatagtggatacctgatagcaggtggcccaatggatcttgaagaggctttgataccatattagaaatcgttgttg 6413673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 24270029 - 24270112
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaag-aggctctgataccatcttaaaa 169  Q
    ||||||| ||||||| ||||||  | |||||| || ||| |||| |||| |||||||| || ||||||||||||||||||||||    
T  24270029 ataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaa 24270112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 24346660 - 24346743
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaag-aggctctgataccatcttaaaa 169  Q
    ||||||| ||||||| ||||||  | |||||| || ||| |||| |||| |||||||| || ||||||||||||||||||||||    
T  24346660 ataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaa 24346743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 166
Target Start/End: Original strand, 17352642 - 17352671
Alignment:
Q  137 ggatcttgaagaggctctgataccatctta 166  Q
    ||||||||||||||||||||||||||||||    
T  17352642 ggatcttgaagaggctctgataccatctta 17352671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 209
Target Start/End: Original strand, 17423785 - 17423917
Alignment:
Q  79 gcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatctt-gaagaggctctgataccatctta-aaatcgtagt 176  Q
    ||||| || |||||| ||||| ||||||||| | |||||  || ||| ||||  |||| |||||| ||||||||| ||||||||||||| || |||| ||    
T  17423785 gcatggatgtaaatggtgggttgtccgatagcggaaaccggatagcaggtggctcaacagatctttgaagaggctttgataccatcttagaagtcgtggt 17423884  T
Q  177 tgagcctaacaaaatcttataaaaccgacttat 209  Q
    |||| |||||| || |  | |||||||||||||    
T  17423885 tgaggctaacataaccccacaaaaccgacttat 17423917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 30770234 - 30770278
Alignment:
Q  127 gtggtccaacggatcttgaagaggctctgataccatcttaaaatc 171  Q
    |||| |||| |||||||| |||||||||||||||||||| |||||    
T  30770234 gtggcccaatggatcttggagaggctctgataccatcttgaaatc 30770278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 2029929 - 2029830
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||||||||||| | ||||||||| ||| |||| |||| |||||||| ||||||||||||||||||||| ||||||| |||| ||||||    
T  2029929 ataaatggtgggtggtccgatagcggaaacctaatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaa 2029830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 187
Target Start/End: Complemental strand, 24396036 - 24395922
Alignment:
Q  74 ttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcg 172  Q
    ||||| |||| | ||||||| |||||||||||||||||||||| | |  ||| ||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  24396036 ttggttcatggacataaatggtgggtggtccgatagtgaaaacatgagagcaggtggtccaatggatcttgaagaggctctgataccctcttagaaatcg 24395937  T
Q  173 tagttgagcctaaca 187  Q
    | |||  ||||||||    
T  24395936 tggtttggcctaaca 24395922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 34893585 - 34893506
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta 166  Q
    ||||||| ||||||||||||||| |||||||| || | | |||| |||| |||||||| |||||||||||||||||||||    
T  34893585 ataaatggtgggtggtccgatagcgaaaacctgatagtaggtggcccaatggatcttggagaggctctgataccatctta 34893506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 5594141 - 5594081
Alignment:
Q  132 ccaacggatcttgaagaggctctgataccatcttaaaatcgtagttgagcctaacaaaatc 192  Q
    |||| ||||||||||||||||||||||| |||||||||||||  |||||||||||| ||||    
T  5594141 ccaatggatcttgaagaggctctgatactatcttaaaatcgtgattgagcctaacacaatc 5594081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 16533472 - 16533380
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttg 178  Q
    ||||||| ||||||| ||||||| |||||||| || ||| || | |||| |||||||||||||||||||||||||| ||| || |||||||||    
T  16533472 ataaatggtgggtggcccgatagcgaaaacctgatagcaggtagcccaatggatcttgaagaggctctgataccattttagaagtcgtagttg 16533380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 16419427 - 16419328
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| |||||||  |||||| | |||||| || ||| |||| |||| |||||||| ||||||||||||||||||||| ||||||| |||| ||||||    
T  16419427 ataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaa 16419328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 40379366 - 40379469
Alignment:
Q  85 atataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcct 183  Q
    ||||||||| ||||||| ||||||| | |||||| || ||| |||| | || |||||||| | ||||||||||||||||||| ||||||| |||| ||||    
T  40379366 atataaatggtgggtggcccgatagaggaaacctgatagcaggtggcctaatggatcttggaaaggctctgataccatcttagaaatcgtggttgggcct 40379465  T
Q  184 aaca 187  Q
    ||||    
T  40379466 aaca 40379469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 14466334 - 14466435
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||||| | |||||| ||  || |||| |||| |||||||| ||||||||||||||||||||| |||| || |||| ||||||    
T  14466334 ataaatggtgggtggcccgatagcggaaacctgataacaagtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaa 14466433  T
Q  186 ca 187  Q
    ||    
T  14466434 ca 14466435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 37828782 - 37828854
Alignment:
Q  88 taaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgatacc 160  Q
    |||||| |||||| |||||||| ||||| ||||| ||| ||| ||||| |||| |||||||||||||||||||    
T  37828782 taaatggtgggtgatccgatagcgaaaatctaatagcaggtgatccaatggatattgaagaggctctgatacc 37828854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 187
Target Start/End: Original strand, 40149113 - 40149261
Alignment:
Q  40 tcttaacacagtctcacgctcaacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacgga 139  Q
    ||||||||||  ||||||  || ||||||| || ||||| | || | ||||||  |||||||||||||||   ||| || || ||| |||  |||| |||    
T  40149113 tcttaacacaccctcacgaccagcactattgggcttggttcgtggacataaatagtgggtggtccgatagctgaaatctgatagcaggtgacccaatgga 40149212  T
Q  140 tcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    ||||||||||||||||||||||||||| |||| || |||| ||||||||    
T  40149213 tcttgaagaggctctgataccatcttagaaattgtggttgggcctaaca 40149261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 5711598 - 5711700
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatctt-gaagaggctctgataccatctta-aaatcgtagttgagccta 184  Q
    ||||||| ||||||| ||||||  | |||||| || ||| ||||||||||||||||| || ||||||||||||| |||||| |||| || |||| |||||    
T  5711598 ataaatggtgggtggcccgataacggaaacctgatagcaggtggtccaacggatcttggaggaggctctgatactatcttagaaatggtggttgggccta 5711697  T
Q  185 aca 187  Q
    |||    
T  5711698 aca 5711700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 93318 - 93379
Alignment:
Q  127 gtggtccaacggatcttgaagaggctctgataccatctt-aaaatcgtagttgagcctaaca 187  Q
    |||| |||| |||||||| |||||||||||||||||||| |||||||| |||| ||||||||    
T  93318 gtggcccaatggatcttggagaggctctgataccatcttaaaaatcgtggttgggcctaaca 93379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 15124731 - 15124808
Alignment:
Q  111 gaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    |||||||| || ||| ||||||||| |||||||| |||| |||||||||||||||| ||||||| |||| | ||||||    
T  15124731 gaaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaatcgtggttgggtctaaca 15124808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 169
Target Start/End: Original strand, 2375060 - 2375169
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgatac 159  Q
    ||||| ||||||| ||| | |||| ||||||||| ||||||||||||||  ||||| || || ||| |||  |||| | ||| |||| || ||||||||     
T  2375060 caacattatttggcttgattcatgaatataaatggtgggtggtccgataacgaaaatctgatagcaggtgacccaatgaatcctgaaaagactctgatat 2375159  T
Q  160 catcttaaaa 169  Q
    ||||||||||    
T  2375160 catcttaaaa 2375169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 38630004 - 38629919
Alignment:
Q  85 atataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaag-aggctctgataccatcttaaaa 169  Q
    |||||||||  ||||| |||||||| | ||||||||| | | |||  ||| ||||||||| || ||||||||||||||||||||||    
T  38630004 atataaatggcgggtgatccgatagcggaaacctaatagaaggtgacccatcggatcttggaggaggctctgataccatcttaaaa 38629919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 18607168 - 18607240
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgatac 159  Q
    ||||||| ||||| | ||||||  | |||||| || |||||||| |||| |||||||| ||||||||||||||    
T  18607168 ataaatggtgggttgcccgataacggaaacctgatagcatgtggcccaatggatcttggagaggctctgatac 18607240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 19110403 - 19110323
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaag-aggctctgataccatctta 166  Q
    ||||||||||  ||| |||||||  |||||||||| ||| |||  ||||||||||||| || ||||| |||||||||||||    
T  19110403 ataaatgatgaatggcccgatagcaaaaacctaatagcaggtgacccaacggatcttggagtaggctttgataccatctta 19110323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 40717365 - 40717466
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||||||||||| | |||||| |||||| |||| |||| |||| ||| ||||||||||||||||||||| ||||||| |||| ||||||    
T  40717365 ataaatggtgggtggtccgatagcggaaacctgatggcaggtggcccaatggatattggagaggctctgataccatcttagaaatcgtggttgggcctaa 40717464  T
Q  186 ca 187  Q
    ||    
T  40717465 ca 40717466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 35796901 - 35797002
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||||| | |||||| || ||| || |||||| |||||| ||||||||||||||||||||||| |||| ||||||| || |||    
T  35796901 ataaatggtgggtggcccgatagcggaaacctgatagcaggtagtccaatggatctcgaagaggctctgataccatcttagaaatggtagttgggcttaa 35797000  T
Q  186 ca 187  Q
    ||    
T  35797001 ca 35797002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 4905660 - 4905764
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| |||||||   ||||||||| ||| |||| |||| ||| |||| ||||||||||||| ||||||| ||||| | |||||||||||    
T  4905660 ataaatggtgggtggcccgatagcagaaacctaatagcaggtggcccaatggagcttggagaggctctgatatcatcttagaaatcatggttgagcctaa 4905759  T
Q  186 caaaa 190  Q
    |||||    
T  4905760 caaaa 4905764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 7926484 - 7926410
Alignment:
Q  91 atgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctt 165  Q
    ||||||||||| || |||||| |||||| || ||| |||| |||| |||||||| ||||||||||||||||||||    
T  7926484 atgatgggtggccctatagtggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatctt 7926410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 187
Target Start/End: Complemental strand, 6218388 - 6218263
Alignment:
Q  63 cactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccat 162  Q
    ||||||| || ||||| | |||| ||||||||||||||  | ||||| | |||||| || | | ||| ||||| |||||||| |||||||||||||||||    
T  6218388 cactattgggcttggttcttgtacataaatgatgggtgacctgatagcggaaacctgatagtaggtgatccaatggatcttggagaggctctgataccat 6218289  T
Q  163 ctta-aaatcgtagttgagcctaaca 187  Q
    |||| ||||||| |||| | ||||||    
T  6218288 cttagaaatcgtggttgtgtctaaca 6218263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 22231232 - 22231333
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| | ||||| ||||||| | |||||| || ||| |||| |||| |||| ||| ||||||||||||||||||||| ||||||| |||| ||||||    
T  22231232 ataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccaatggattttggagaggctctgataccatcttagaaatcgtggttgggcctaa 22231331  T
Q  186 ca 187  Q
    ||    
T  22231332 ca 22231333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 183
Target Start/End: Original strand, 28245685 - 28245782
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcct 183  Q
    ||||||| ||||||| ||||||| | |||||| || ||| |||| |||| |||||||| ||||||||||||||||| ||| ||||||| |||| ||||    
T  28245685 ataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgggcct 28245782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 187
Target Start/End: Complemental strand, 30305470 - 30305333
Alignment:
Q  52 ctcacgctcaacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaa-gagg 150  Q
    ||||||| |||||||||| | ||||||||||  ||||||||| ||||||||||||||  | |||||  || ||| ||| ||||| |||| ||||| ||||    
T  30305470 ctcacgcccaacactattggatttggtgcataaatataaatgttgggtggtccgataacgtaaaccagatagcaggtgatccaaaggattttgaaggagg 30305371  T
Q  151 ctctgataccatctt-aaaatcgtagttgagcctaaca 187  Q
    ||||||  |||| || |||||||| ||||||| |||||    
T  30305370 ctctgacgccatattaaaaatcgtggttgagcataaca 30305333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 49190114 - 49190182
Alignment:
Q  98 gtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta 166  Q
    ||||| |||||| | ||||||||  ||| |||||||||||||||||| | |||||||||||||||||||    
T  49190114 gtggttcgatagcggaaacctaaaagcaggtggtccaacggatcttggataggctctgataccatctta 49190182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 185
Target Start/End: Original strand, 6666535 - 6666658
Alignment:
Q  63 cactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccat 162  Q
    ||||||| || |||||||||| ||||||||| ||||||  |||||||   || ||| || ||| |||| ||||| ||||||| ||||| ||| |||||||    
T  6666535 cactattgggcttggtgcatggatataaatggtgggtgacccgatagaagaatccttatagcaggtggcccaacagatcttgtagaggttctaataccat 6666634  T
Q  163 ctta-aaatcgtagttgagcctaa 185  Q
    |||| ||||||| |||| ||||||    
T  6666635 cttagaaatcgtggttgggcctaa 6666658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 22445604 - 22445533
Alignment:
Q  95 tgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta 166  Q
    ||||| ||||||||||| || |||||| | | ||||  ||| ||||||||||||||||||||||||||||||    
T  22445604 tgggtagtccgatagtgtaatcctaatagtaggtggctcaatggatcttgaagaggctctgataccatctta 22445533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 27634248 - 27634315
Alignment:
Q  95 tgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccat 162  Q
    |||||||||||||||   |||||| || ||| ||||||||| |||||||| |||||||||||||||||    
T  27634248 tgggtggtccgatagcagaaacctgatagcaagtggtccaatggatcttggagaggctctgataccat 27634315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 35788820 - 35788718
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaag-aggctctgataccatctta-aaatcgtagttgagccta 184  Q
    ||||||| ||||||| | ||||  | |||||| || ||| |||| ||||||||||||| || ||||||||||||||||||| ||||||| |||| |||||    
T  35788820 ataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggccta 35788721  T
Q  185 aca 187  Q
    |||    
T  35788720 aca 35788718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 30530136 - 30530187
Alignment:
Q  137 ggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    |||||||| ||||||||||||||||||||| |||| || |||||||||||||    
T  30530136 ggatcttggagaggctctgataccatcttagaaattgtggttgagcctaaca 30530187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 41853569 - 41853514
Alignment:
Q  53 tcacgctcaacactatttggtttggtgcatgtatataaatgatgggtggtccgata 108  Q
    ||||||||| ||||||| || |||||||  | ||||||||||||||||||||||||    
T  41853569 tcacgctcatcactattgggcttggtgcgaggatataaatgatgggtggtccgata 41853514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 50543462 - 50543592
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaac--ggatcttgaagaggctctgat 157  Q
    |||||||||| || ||||| | || | ||||||| ||||||| ||||||  | |||||| || ||| |||||| ||   |||||||| ||||||||||||    
T  50543462 caacactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtcaaatatggatcttggagaggctctgat 50543561  T
Q  158 accatctta-aaatcgtagttgagcctaaca 187  Q
    | ||||||| ||||||| |||| ||||||||    
T  50543562 atcatcttagaaatcgtggttgggcctaaca 50543592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 13555427 - 13555505
Alignment:
Q  113 aaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaacaaaa 190  Q
    |||||| || ||| ||||||||| |||||||| ||||||||||||||||| | | |||| || |||| |||||||||||    
T  13555427 aaacctgatagcaggtggtccaatggatcttggagaggctctgataccatatcagaaattgtggttgggcctaacaaaa 13555505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 18528441 - 18528499
Alignment:
Q  147 gaggctctgataccatctta-aaatcgtagttgagcctaacaaaatcttataaaaccga 204  Q
    |||||||||||||||||||| ||||||| |||| | |||||||||||| | ||||||||    
T  18528441 gaggctctgataccatcttagaaatcgtggttgggtctaacaaaatctcacaaaaccga 18528499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 21646399 - 21646524
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgatac 159  Q
    |||||||||| |  ||||| |||| | ||||||| ||| |||||||||||||||||| | || ||| |||  |||| | |||||| |||| |||| ||||    
T  21646399 caacactattggacttggttcatggacataaatggtgg-tggtccgatagtgaaaacatgatagcaggtgacccaatgaatcttggagagactctaatac 21646497  T
Q  160 catctt-aaaatcgtagttgagcctaa 185  Q
    |||||| |||||||| |||| ||||||    
T  21646498 catcttaaaaatcgtggttgggcctaa 21646524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 36686065 - 36686147
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatcttaaaa 169  Q
    ||||||| ||||||| ||||||| | |||||| || ||| |||| |||  | |||||||||||||||| |||| |||||||||    
T  36686065 ataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccattgaatcttgaagaggctcttatactatcttaaaa 36686147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 7572618 - 7572710
Alignment:
Q  74 ttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatctt-gaagaggctctgataccatctta 166  Q
    |||||||||| ||||||||| ||||||| || |||| | |||||| || | | |||||||||| |||||| |  ||||||||||||||||||||    
T  7572618 ttggtgcatggatataaatggtgggtggcccaatagcggaaacctgatagaaggtggtccaac-gatcttggtggaggctctgataccatctta 7572710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 9685502 - 9685437
Alignment:
Q  143 tgaagaggctctgataccatctta-aaatcgtagttgagcctaacaaaatcttataaaaccgactt 207  Q
    |||||||||||||||||||| ||| ||||||| |||| |||||||| || || | |||||||||||    
T  9685502 tgaagaggctctgataccatattagaaatcgtggttgggcctaacacaacctcacaaaaccgactt 9685437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 14783111 - 14783212
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    |||||||| |||||| ||||||  |||||||| ||  || |||| |||| | ||  |||||||||||||||||||| ||| ||||||| |||| ||||||    
T  14783111 ataaatgacgggtggcccgataacgaaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcctaa 14783210  T
Q  186 ca 187  Q
    ||    
T  14783211 ca 14783212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 35819052 - 35819153
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctt-aaaatcgtagttgagcctaa 185  Q
    ||||||| ||||||  ||||||| | |||||| || ||| |||| |||| |||||||  |||| ||||||| ||||||| |||||||| |||| ||||||    
T  35819052 ataaatggtgggtgacccgatagcggaaacctgatagcaggtggcccaatggatcttagagagactctgatgccatcttaaaaatcgtggttgggcctaa 35819151  T
Q  186 ca 187  Q
    ||    
T  35819152 ca 35819153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 4455680 - 4455716
Alignment:
Q  62 acactatttggtttggtgcatgtatataaatgatggg 98  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  4455680 acactattgggtttggtgcatgaatataaatgatggg 4455716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 40716544 - 40716624
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaa-gaggctctgataccatctta 166  Q
    |||||||| |||||| ||||||  | |||||| || ||| |||| |||||||||| || | ||||||||||||||||||||    
T  40716544 ataaatgacgggtggcccgataacggaaacctgatagcaggtggcccaacggatcgtggatgaggctctgataccatctta 40716624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 33834378 - 33834250
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgatac 159  Q
    |||||||||| || ||||| | || | ||||||| ||||||| ||||||| |||||||| || ||| |||| |||| |||||||| ||||||||||||||    
T  33834378 caacactattgggcttggttcgtggacataaatggtgggtggcccgatagggaaaacctgatagcaggtggcccaatggatcttggagaggctctgatac 33834279  T
Q  160 catctta-aaatcgtagttgagcctaaca 187  Q
    ||||||| |||| || |||| ||||||||    
T  33834278 catcttagaaatggtggttgggcctaaca 33834250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 187
Target Start/End: Complemental strand, 25620323 - 25620195
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgatac 159  Q
    |||||||||| || ||||| | || | ||||||| ||||||| || |||| | |||||| || ||| |||| |||| |||||||| ||||||||||||||    
T  25620323 caacactattgggcttggttcgtggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgatac 25620224  T
Q  160 catctta-aaatcgtagttgagcctaaca 187  Q
    ||||||| ||||||| |||| ||||||||    
T  25620223 catcttagaaatcgtggttgggcctaaca 25620195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 31485556 - 31485662
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgatac 159  Q
    |||||||||| |||||| | | || ||||||||| ||||||| |||||||||||||||| || | | |||| |||| |||||||| || |||||| ||||    
T  31485556 caacactattgggtttgattcgtggatataaatggtgggtggcccgatagtgaaaacctgatagtaggtggcccaatggatcttgtagcggctcttatac 31485655  T
Q  160 catctta 166  Q
    |||||||    
T  31485656 catctta 31485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 166
Target Start/End: Complemental strand, 1596795 - 1596674
Alignment:
Q  45 acacagtctcacgctcaacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttg 144  Q
    ||||| |||||||  || ||||||| || ||||| | || | ||||||| ||||||| ||||||| | |||||| ||  ||||||| |||| ||||||||    
T  1596795 acacactctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacatgtggcccaatggatcttg 1596696  T
Q  145 aagaggctctgataccatctta 166  Q
     |||||||||||||||||||||    
T  1596695 gagaggctctgataccatctta 1596674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 21861454 - 21861348
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||||| | |||||| ||  || |||| |||| |||||||| ||||||||||||||||||||| |||| || |||| ||||||    
T  21861454 ataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaa 21861355  T
Q  186 caaaatc 192  Q
    || ||||    
T  21861354 cacaatc 21861348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 21821921 - 21821860
Alignment:
Q  132 ccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaacaaaatc 192  Q
    |||||| |||||||||||||||||||||||||||| ||||||| |||| |||||||| ||||    
T  21821921 ccaacgtatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaatc 21821860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 36277150 - 36277251
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||||||||||| | |||||| || | | |||| |||| |||||||| ||||||||||||| ||||||| ||||||| |||| | ||||    
T  36277150 ataaatggtgggtggtccgatagcggaaacctgatagtaggtggcccaatggatcttggagaggctctgataacatcttagaaatcgtggttgggactaa 36277249  T
Q  186 ca 187  Q
    ||    
T  36277250 ca 36277251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 2404342 - 2404453
Alignment:
Q  97 ggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaacaaaatctta 195  Q
    |||||||| |||| | |||||| || ||| |||  |||| |||| | ||||||||||||||||||||||| ||||||| ||||||| ||||| |  | ||    
T  2404342 ggtggtccaatagcggaaacctgatagcaggtgacccaatggatttcgaagaggctctgataccatcttagaaatcgtggttgagcttaacacagcccta 2404441  T
Q  196 taaaaccgactt 207  Q
    ||||||||||||    
T  2404442 taaaaccgactt 2404453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 36993240 - 36993311
Alignment:
Q  95 tgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta 166  Q
    |||||||||| |||| | ||| || || ||| |||| |||| ||||||||||||||||||||||||||||||    
T  36993240 tgggtggtccaatagcggaaatctgatagcacgtggcccaatggatcttgaagaggctctgataccatctta 36993311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 44874502 - 44874581
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta 166  Q
    ||||||||||||||  ||||| ||| |||||| || ||| |||  |||| ||||||||||||| ||||||||||||||||    
T  44874502 ataaatgatgggtgacccgattgtggaaacctgatagcaggtgacccaatggatcttgaagagactctgataccatctta 44874581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 20305406 - 20305368
Alignment:
Q  131 tccaacggatcttgaagaggctctgataccatcttaaaa 169  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  20305406 tccaatggatcttgaagaggctctgataccatcttaaaa 20305368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 187
Target Start/End: Original strand, 33996203 - 33996336
Alignment:
Q  52 ctcacgctcaacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggc 151  Q
    |||||| ||||||||||| || ||||| | || | ||||||| ||||||| ||||| | | |||||| || ||| |||| |||| |||   || ||||||    
T  33996203 ctcacgatcaacactattgggcttggttcgtggacataaatggtgggtggcccgattgcggaaacctgatagcaggtggcccaatgga---tggagaggc 33996299  T
Q  152 tctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    ||||||||||||||| ||||||| |||| ||||||||    
T  33996300 tctgataccatcttagaaatcgtggttgggcctaaca 33996336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 10882163 - 10882264
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    |||||||| |||| ||||||||  | |||||| ||  || |||| |||| | ||| |||||||||||||||||||||||| ||||||| |||| ||||||    
T  10882163 ataaatgacgggttgtccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatcttagaaatcgtggttgggcctaa 10882262  T
Q  186 ca 187  Q
    ||    
T  10882263 ca 10882264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 29469765 - 29469664
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||||| | || ||| ||  || |||| |||| |||||||| ||||||||||||||||| ||| ||||||| |||| ||||||    
T  29469765 ataaatggtgggtggcccgatagcggaagcctgataacaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgggcctaa 29469666  T
Q  186 ca 187  Q
    ||    
T  29469665 ca 29469664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 4507047 - 4506971
Alignment:
Q  132 ccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaacaaaatcttataaaaccgactt 207  Q
    |||| |||||||||| |||||||||||| |||||| |||||||||||| | |||||| || |  |||||||||||||    
T  4507047 ccaatggatcttgaaaaggctctgatacaatcttagaaatcgtagttgggtctaacacaaccccataaaaccgactt 4506971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 186
Target Start/End: Complemental strand, 22574761 - 22574661
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| |||||||||||||||   |||||| || ||| |||| |||| |||||||| |||| |||| |||||||| || |||| || |||||||||||    
T  22574761 ataaatggtgggtggtccgatagctgaaacctgatagcaggtggcccaatggatcttggagagactcttataccatcatagaaattgtggttgagcctaa 22574662  T
Q  186 c 186  Q
    |    
T  22574661 c 22574661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 36575093 - 36575152
Alignment:
Q  85 atataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttg 144  Q
    ||||||||| | ||||||| |||||||||||| | || ||||||||||||| ||||||||    
T  36575093 atataaatggtcggtggtcggatagtgaaaacatgatagcatgtggtccaatggatcttg 36575152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 3519963 - 3520081
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||  ||||||| |||||||  || ||| |||| |||| ||||| || |||||||||||||||| || | ||||||| ||||| |||||    
T  3519963 ataaatggtgggtgtcccgatagcgaaaaccagatagcaggtggcccaatggatcatggagaggctctgataccaactaagaaatcgtggttgaacctaa 3520062  T
Q  186 ca-aaatcttataaaaccg 203  Q
    || ||  ||||||||||||    
T  3520063 cacaacccttataaaaccg 3520081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 9689050 - 9689128
Alignment:
Q  113 aaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaacaaaa 190  Q
    |||||| || ||| ||||||||| |||||||| ||||||||||||||||| | | |||| || |||| |||||||||||    
T  9689050 aaacctgatagcaggtggtccaatggatcttggagaggctctgataccatatcagaaattgtggttgggcctaacaaaa 9689128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 4886489 - 4886388
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| |||||||  |||||||  |||| | || ||| |||| |||| |||||||| |||| | |||||||||||||| ||||||| |||| ||||||    
T  4886489 ataaatggtgggtggctcgatagtagaaacttgatagcaggtggcccaatggatcttggagagaccctgataccatcttagaaatcgtggttgggcctaa 4886390  T
Q  186 ca 187  Q
    ||    
T  4886389 ca 4886388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 34027553 - 34027452
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    |||||||| |||||| |||||| || |||||| ||  || |||| |||| | ||| |||||||||||| ||||||| ||| ||||||| |||| ||||||    
T  34027553 ataaatgacgggtggcccgataatggaaacctgataacaggtggcccaaagaatcgtgaagaggctctaataccatattagaaatcgtggttgggcctaa 34027454  T
Q  186 ca 187  Q
    ||    
T  34027453 ca 34027452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 11743138 - 11743106
Alignment:
Q  137 ggatcttgaagaggctctgataccatcttaaaa 169  Q
    |||||||||||||||||||||| ||||||||||    
T  11743138 ggatcttgaagaggctctgatatcatcttaaaa 11743106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 203
Target Start/End: Original strand, 48661452 - 48661596
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgatac 159  Q
    |||||||||| || ||||| | || | ||||||| ||||||| |||| || | |||||| || ||| ||||  ||| || |||| ||||||||||||||     
T  48661452 caacactattgggcttggttcgtggacataaatggtgggtggcccgaaagcggaaacctgatagcaggtggctcaatggttcttaaagaggctctgatat 48661551  T
Q  160 catctta-aaatcgtagttgagcctaacaaaatcttataaaaccg 203  Q
    ||| ||| ||||||| |||| | |||||| ||||| | |||||||    
T  48661552 catattagaaatcgtggttgggtctaacacaatctcacaaaaccg 48661596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 5678 - 5779
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||||||||||| | |||||| || ||| ||||  ||| |||||||| ||||||||||||||||||||| ||||||| |||| ||||||    
T  5678 ataaatggtgggtggtccgatagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaa 5777  T
Q  186 ca 187  Q
    ||    
T  5778 ca 5779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 4112699 - 4112778
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta 166  Q
    ||||||| |||||||| |||||| | |||||| || ||| ||||||||| |||||||| |||||||||||||||||||||    
T  4112699 ataaatggtgggtggttcgatagcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccatctta 4112778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 38733285 - 38733190
Alignment:
Q  113 aaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaacaaaatcttataaaaccgactt 207  Q
    |||||| || ||| ||||||||| |||||||| |||| |||||||||||||||| ||||||| ||||| ||||||| ||||| | |||||||||||    
T  38733285 aaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaatcgtggttgaacctaacacaatctcacaaaaccgactt 38733190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 30369995 - 30369894
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||||||| |||||| || ||| |||  |||| |||||||| |||||||||||||| |||||| ||||||| |||| ||||||    
T  30369995 ataaatggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatcttggagaggctctgatacaatcttagaaatcgtggttgggcctaa 30369896  T
Q  186 ca 187  Q
    ||    
T  30369895 ca 30369894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 187
Target Start/End: Complemental strand, 26177070 - 26176967
Alignment:
Q  85 atataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcct 183  Q
    ||||||||| ||||||||||||||| | ||| || || ||| |||| |||| |||||||| ||||||||||||| ||||||| ||||||  |||| ||||    
T  26177070 atataaatggtgggtggtccgatagcggaaatctgatagcaggtggcccaatggatcttggagaggctctgatatcatcttagaaatcgcggttgggcct 26176971  T
Q  184 aaca 187  Q
    ||||    
T  26176970 aaca 26176967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 39348276 - 39348377
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatctt-gaagaggctctgataccatctta-aaatcgtagttgagccta 184  Q
    ||||||| ||||||||||||||||| |||||| || ||| |||| |||| ||| ||| || |||||||||||||||||||| ||||||| |||| |||||    
T  39348276 ataaatggtgggtggtccgatagtggaaacctgatagcaggtggcccaatggaccttggaggaggctctgataccatcttagaaatcgt-gttgggccta 39348374  T
Q  185 aca 187  Q
    |||    
T  39348375 aca 39348377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 52961512 - 52961426
Alignment:
Q  82 tgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatcttaaa 168  Q
    |||| |||| || ||||||| ||||||| | |||||| || ||| |||| |||| ||||||||||||||||||||||||| ||||||    
T  52961512 tgtacataactggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccaacttaaa 52961426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 35772189 - 35772088
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||||| | |||||| || |||  ||| |||| |||||||||  ||||||||||||||||||| ||||||| |||| ||||||    
T  35772189 ataaatggtgggtggcccgatagcggaaacctgatagcagatggcccaatggatcttgagaaggctctgataccatcttagaaatcgtggttgggcctaa 35772090  T
Q  186 ca 187  Q
    ||    
T  35772089 ca 35772088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 2859551 - 2859630
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta 166  Q
    ||||||| ||||||| |||||||   ||||||||| | | |||| |||| |||||||||||||||||| |||||||||||    
T  2859551 ataaatggtgggtggcccgatagcagaaacctaatagaaggtggcccaatggatcttgaagaggctctaataccatctta 2859630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 26346918 - 26346972
Alignment:
Q  112 aaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta 166  Q
    |||||||||| ||| |||||||||||||| |||| |||||||||||| |||||||    
T  26346918 aaaacctaatagcaggtggtccaacggattttgaggaggctctgatatcatctta 26346972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 31496295 - 31496421
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||||||||||| |  ||||| || ||| ||||||||| ||||||| ||||| |||| |||| |||||| |||||||  ||||| ||||    
T  31496295 ataaatggtgggtggtccgatagcgggaacctgatagcaggtggtccaatggatcttaaagagactctaatactatcttagaaatcgtgattgagtctaa 31496394  T
Q  186 caaaatcttataaaaccgacttataag 212  Q
    || || |  ||||||||| ||| ||||    
T  31496395 cacaaccccataaaaccggcttgtaag 31496421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 187
Target Start/End: Original strand, 4098335 - 4098428
Alignment:
Q  95 tgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    ||||||| |||||||   |||||| || ||| |||| |||| ||||||||||||| ||||||||||| |||| ||||||| |||| ||||||||    
T  4098335 tgggtggcccgatagcagaaacctgattgcaggtggcccaatggatcttgaagagtctctgataccaacttagaaatcgtggttgggcctaaca 4098428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 5953658 - 5953743
Alignment:
Q  85 atataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaa-gaggctctgataccatcttaaaa 169  Q
    ||||||||| ||||||| |||||| || |||||| |  ||| |||| | ||||||||||| | |||||||||||||||||||||||    
T  5953658 atataaatgttgggtggcccgataatggaaacctgaaagcaggtggcctaacggatcttggatgaggctctgataccatcttaaaa 5953743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 32783231 - 32783310
Alignment:
Q  113 aaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaacaaaat 191  Q
    |||||| || ||| ||||| ||| ||||||||||||| |||||||||||||||| ||||||| ||||   ||||||||||    
T  32783231 aaacctgatagcaggtggtacaatggatcttgaagagactctgataccatcttagaaatcgtggttggatctaacaaaat 32783310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 33156894 - 33156792
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaag-aggctctgataccatctta-aaatcgtagttgagccta 184  Q
    ||||||| ||| ||| ||||||| | |||||| || ||| |||  ||||||||||||| || ||||||| ||||||||||| ||||||| |||| |||||    
T  33156894 ataaatggtggatggcccgatagcggaaacctgatagcaggtgaaccaacggatcttggagtaggctctaataccatcttagaaatcgtggttgggccta 33156795  T
Q  185 aca 187  Q
    |||    
T  33156794 aca 33156792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 4112930 - 4113031
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| |||||||||| |||| | |||||| || |   ||||  ||| |||||||| |||||||| |||||||||||| ||||||| |||| ||||||    
T  4112930 ataaatggtgggtggtccaatagcggaaacctgatagatggtggctcaatggatcttggagaggctccgataccatcttagaaatcgtggttgggcctaa 4113029  T
Q  186 ca 187  Q
    ||    
T  4113030 ca 4113031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 17402709 - 17402660
Alignment:
Q  120 atggcatgtggtccaacggatcttgaagaggctctgataccatcttaaaa 169  Q
    |||||| || |||||| |||||||| ||| ||||||||||||||||||||    
T  17402709 atggcaggtagtccaatggatcttggagatgctctgataccatcttaaaa 17402660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 25713345 - 25713248
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgat 157  Q
    |||||||||| || ||||| | || | ||||||| ||||||| ||||||| | |||| | || ||| |||| |||| |||||||| ||||||||||||    
T  25713345 caacactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacttgatagcaggtggcccaatggatcttggagaggctctgat 25713248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 51589966 - 51589865
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    |||||||| |||||| ||||||  | |||||||||   | |||| |||| | ||| |||||||||||||||||||| ||| ||||||| |||| ||||||    
T  51589966 ataaatgacgggtggcccgataacggaaacctaataataggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaa 51589867  T
Q  186 ca 187  Q
    ||    
T  51589866 ca 51589865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 52676398 - 52676447
Alignment:
Q  52 ctcacgctcaacactatttggtttggtgcatgtatataaatgatgggtgg 101  Q
    |||| ||||| ||||||| |||||||||| || |||||||||||||||||    
T  52676398 ctcatgctcatcactattgggtttggtgcgtggatataaatgatgggtgg 52676447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 5109412 - 5109328
Alignment:
Q  85 atataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatcttaaaa 169  Q
    ||||||||| ||||||  |||||| || |||||| || | | ||||  ||||| |||||| |||| |||||||||||||||||||    
T  5109412 atataaatggtgggtgacccgataatggaaacctgatagaaggtggctcaacgaatcttggagagactctgataccatcttaaaa 5109328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 41138 - 41229
Alignment:
Q  95 tgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    |||||||| |||||| | |||| | || ||| |||| |||| | |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  41138 tgggtggttcgatagcgcaaacttgatagcaggtggcccaatgaatcttggagaggctctgataccatcttagaaatcgtagttgagcctaa 41229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 6237631 - 6237710
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta 166  Q
    ||||||| ||||||||||||||| | ||||||  | ||| ||||||||| ||||||||||||| |||| |||||||||||    
T  6237631 ataaatggtgggtggtccgatagcggaaacctggtagcaagtggtccaatggatcttgaagagactctaataccatctta 6237710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 12330103 - 12330204
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||| | | |||||| || ||| |||| |||| |||||||| ||||||||||||||||| ||| ||||||| |||| ||||||    
T  12330103 ataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgggcctaa 12330202  T
Q  186 ca 187  Q
    ||    
T  12330203 ca 12330204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 13353361 - 13353260
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||||| | |||||| ||  || |||| |||| |||||||| ||||||||||||||||||||| |||| || |||| ||||||    
T  13353361 ataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaa 13353262  T
Q  186 ca 187  Q
    ||    
T  13353261 ca 13353260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 33796486 - 33796385
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| ||||||| ||||||| | |||||| ||  || |||| |||| |||||||| ||||||||||||||||||||| |||| || |||| ||||||    
T  33796486 ataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaa 33796387  T
Q  186 ca 187  Q
    ||    
T  33796386 ca 33796385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 4868736 - 4868838
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaag-aggctctgataccatctta-aaatcgtagttgagccta 184  Q
    ||||||| ||||||| ||||||  | |||||| || ||| |||| ||| ||||||||| || ||||||||||||||||||| ||||||| |||| |||||    
T  4868736 ataaatggtgggtggcccgataacggaaacctgatagcaggtggcccagcggatcttggaggaggctctgataccatcttagaaatcgtggttgggccta 4868835  T
Q  185 aca 187  Q
    |||    
T  4868836 aca 4868838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 187
Target Start/End: Complemental strand, 33494691 - 33494598
Alignment:
Q  95 tgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    ||||||| ||||||||| |||||| || ||| |||  |||| |||||| ||||||| ||||||||||||||| |||| || |||| ||||||||    
T  33494691 tgggtggcccgatagtggaaacctgatagcaggtgacccaatggatctcgaagaggttctgataccatcttagaaatggtggttgggcctaaca 33494598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 2736325 - 2736447
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaa-gaggctctgataccatctta-aaatcgtagttgagccta 184  Q
    ||||||||||||||||||||||  | ||||||||| ||| |||| ||||  |||||||||  ||||||||||| ||| ||| ||||||| |||  || ||    
T  2736325 ataaatgatgggtggtccgataacggaaacctaatagcaggtggcccaatagatcttgaatcaggctctgatatcattttagaaatcgtggttaggctta 2736424  T
Q  185 acaaaatcttataaaaccgactt 207  Q
    ||| ||||  | |||||||||||    
T  2736425 acacaatccaacaaaaccgactt 2736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 6542867 - 6542945
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctt 165  Q
    ||||||| ||||||  ||||||  | |||||| || ||| |||  |||| |||||||||||||||||||||||||||||    
T  6542867 ataaatggtgggtgacccgataacggaaacctgatagcaagtgacccaatggatcttgaagaggctctgataccatctt 6542945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 9705181 - 9705079
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaag-aggctctgataccatctta-aaatcgtagttgagccta 184  Q
    ||||||| ||||||| |||||| || |||||| || ||| |||| |||||  |||||| || ||||||||||||||||||| |||| || |||| |||||    
T  9705181 ataaatggtgggtggcccgataatggaaacctgatagcaggtggcccaacaaatcttggaggaggctctgataccatcttagaaatggtggttgggccta 9705082  T
Q  185 aca 187  Q
    |||    
T  9705081 aca 9705079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 27653321 - 27653256
Alignment:
Q  143 tgaagaggctctgataccatctta-aaatcgtagttgagcctaacaaaatcttataaaaccgactt 207  Q
    |||||||||||||||||||| ||| ||||||| |||| |||||||| ||||  | |||||||||||    
T  27653321 tgaagaggctctgataccatattagaaatcgtggttgggcctaacacaatcccacaaaaccgactt 27653256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 81959 - 81876
Alignment:
Q  130 gtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaacaaaatcttataaaaccgacttataag 212  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||| |||| |||||||| || |  | ||||||||||| ||||    
T  81959 gtccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtaag 81876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 14463 - 14362
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    ||||||| | ||||| ||||||| | |||||| ||  ||| ||| |||| |||||||| ||||||||||||||||||||| ||| ||| |||| ||||||    
T  14463 ataaatggtaggtggcccgatagcggaaacctgataacatatggcccaatggatcttggagaggctctgataccatcttagaaaacgtggttgggcctaa 14364  T
Q  186 ca 187  Q
    ||    
T  14363 ca 14362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 236
Target Start/End: Complemental strand, 5789 - 5665
Alignment:
Q  113 aaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaacaaaatcttataaaaccgacttataa 211  Q
    |||||| || ||| |||| |||| |||| ||||||||||||||||||||||||| ||||||| |||| | |||||| || |  | ||||||| ||| |||    
T  5789 aaacctgatagcaggtggcccaatggattttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtaa 5690  T
Q  212 gatggagattaaccgcacttgtaaa 236  Q
    ||||  ||||| || ||||| ||||    
T  5689 gatgaggattacccccacttataaa 5665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 4003 - 3904
Alignment:
Q  89 aaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    ||||||||||||| ||||||| | |||||| || ||| |||| |||  |||||||| ||||| ||||||||||| ||| |||| || |||| ||||||||    
T  4003 aaatgatgggtggcccgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgtgcctaaca 3904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 4647 - 4548
Alignment:
Q  89 aaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    ||||||||||||| ||||||| | |||||| || ||| |||| |||  |||||||| ||||| ||||||||||| ||| |||| || |||| ||||||||    
T  4647 aaatgatgggtggcccgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgtgcctaaca 4548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 2036 - 1975
Alignment:
Q  127 gtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaaca 187  Q
    |||| |||| |||||||| ||||||||||||||||||||| |||| || |||| ||||||||    
T  2036 gtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaaca 1975  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 51460 - 51355
Alignment:
Q  60 caacactatttggtttggtgcatgtatataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgatac 159  Q
    |||||||||| || ||||| | || | ||||||||| ||||| ||||||||  |||||| || ||| | |  |||| |||||||| ||| ||||||||||    
T  51460 caacactattgggcttggttcgtgaacataaatgataggtggcccgatagtagaaacctgatagcaggagacccaatggatcttggagaagctctgatac 51361  T
Q  160 catctt 165  Q
    ||||||    
T  51360 catctt 51355  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 56619 - 56518
Alignment:
Q  87 ataaatgatgggtggtccgatagtgaaaacctaatggcatgtggtccaacggatcttgaagaggctctgataccatctta-aaatcgtagttgagcctaa 185  Q
    |||||||| |||||| ||||||  |||||||| ||  || |||| |||| | ||  |||||||||||||||||||| ||| ||||||| |||| ||||||    
T  56619 ataaatgacgggtggcccgataacgaaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcctaa 56520  T
Q  186 ca 187  Q
    ||    
T  56519 ca 56518  T

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