View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11809_high_39 (Length: 358)
Name: NF11809_high_39
Description: NF11809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11809_high_39 |
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Alignment Details
Target: chr6 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 37 - 345
Target Start/End: Original strand, 14568123 - 14568431
Alignment:
| Q |
37 |
ttttgcaaattgttaacagggccggcctaattattattcaaagaaaataatacgaataagtttgatgatgtgtatataaaataaaattctgtcgtacggt |
136 |
Q |
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| T |
14568123 |
ttttgcaaattgttaacagggccggcctaattattattcaaagaaaataatacgaataagtttgatgatgtgtatataaaataaaattctgtcgaacggt |
14568222 |
T |
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| Q |
137 |
tatgcttcaatttgtctaatgaatgtttctcatataatttccaacaaagcacatatactatatgtatccacattattcaaacacatgcataaccacctgt |
236 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
14568223 |
catgcttcaatttgtctaatgaatgtttctcatataatttccaacaaagcacatatactatatgtattcacattattcaaacacatgcataaccacctgt |
14568322 |
T |
|
| Q |
237 |
taaggtggaaagctgaattatattaatctggcatctaatgcatgcatgtgatgttatatgttccacacaattttgacacgaaagcttatttgtcataatt |
336 |
Q |
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| T |
14568323 |
tcaggtggaaagctgaattatattaatctggcatctaatgcatgcatgtgatgttatatgttccacacaattttgacacgaaagcttatttgtcataatt |
14568422 |
T |
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| Q |
337 |
gatagatct |
345 |
Q |
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||||||||| |
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| T |
14568423 |
gatagatct |
14568431 |
T |
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