View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11809_high_53 (Length: 283)

Name: NF11809_high_53
Description: NF11809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11809_high_53
NF11809_high_53
[»] scaffold0017 (7 HSPs)
scaffold0017 (6-283)||(40089-40386)
scaffold0017 (127-283)||(180592-180754)
scaffold0017 (6-169)||(58750-58932)
scaffold0017 (127-283)||(175680-175842)
scaffold0017 (6-64)||(175539-175599)
scaffold0017 (6-64)||(180451-180511)
scaffold0017 (204-236)||(58714-58746)
[»] scaffold0185 (1 HSPs)
scaffold0185 (1-283)||(9330-9631)
[»] scaffold0012 (4 HSPs)
scaffold0012 (6-280)||(7395-7691)
scaffold0012 (150-283)||(141183-141320)
scaffold0012 (173-283)||(128032-128144)
scaffold0012 (127-197)||(128001-128074)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-283)||(17582-17883)
[»] chr2 (51 HSPs)
chr2 (89-283)||(22755598-22755791)
chr2 (118-282)||(20646331-20646496)
chr2 (114-283)||(19312737-19312909)
chr2 (156-283)||(19297376-19297506)
chr2 (139-283)||(24275385-24275534)
chr2 (139-283)||(17968926-17969074)
chr2 (110-283)||(967222-967400)
chr2 (6-89)||(21025463-21025547)
chr2 (156-266)||(23392467-23392577)
chr2 (173-283)||(19497726-19497839)
chr2 (139-283)||(21172185-21172333)
chr2 (173-280)||(19356701-19356811)
chr2 (134-283)||(24425271-24425423)
chr2 (173-283)||(24414759-24414870)
chr2 (171-283)||(26867469-26867581)
chr2 (201-283)||(36784540-36784623)
chr2 (173-283)||(18768642-18768754)
chr2 (6-76)||(19497940-19498011)
chr2 (171-283)||(20417381-20417493)
chr2 (6-88)||(20646545-20646627)
chr2 (173-283)||(28721052-28721164)
chr2 (173-283)||(28731640-28731752)
chr2 (171-283)||(26880058-26880170)
chr2 (139-236)||(6081537-6081638)
chr2 (139-283)||(22764017-22764165)
chr2 (139-247)||(27978137-27978249)
chr2 (139-247)||(28064666-28064778)
chr2 (1-88)||(24814567-24814655)
chr2 (6-76)||(19299959-19300030)
chr2 (201-283)||(28374233-28374313)
chr2 (6-64)||(967464-967523)
chr2 (6-64)||(19312978-19313037)
chr2 (6-64)||(24275234-24275293)
chr2 (201-283)||(28379572-28379652)
chr2 (139-283)||(22774721-22774869)
chr2 (139-283)||(22780099-22780247)
chr2 (29-88)||(24793992-24794052)
chr2 (240-283)||(6081625-6081668)
chr2 (201-236)||(9762551-9762586)
chr2 (201-236)||(9773087-9773122)
chr2 (6-64)||(17969170-17969229)
chr2 (201-236)||(34789998-34790033)
chr2 (201-236)||(34804141-34804176)
chr2 (201-230)||(16777266-16777295)
chr2 (173-282)||(44840625-44840731)
chr2 (6-68)||(19356528-19356592)
chr2 (117-169)||(19356660-19356712)
chr2 (6-64)||(22774567-22774627)
chr2 (6-64)||(22779945-22780005)
chr2 (204-280)||(31967845-31967920)
chr2 (157-229)||(34321748-34321818)
[»] chr3 (84 HSPs)
chr3 (89-283)||(31113691-31113886)
chr3 (115-283)||(21736472-21736644)
chr3 (139-283)||(2246752-2246901)
chr3 (139-283)||(16077315-16077464)
chr3 (1-89)||(17022060-17022148)
chr3 (139-283)||(1064524-1064673)
chr3 (139-283)||(8739827-8739976)
chr3 (139-283)||(9092065-9092214)
chr3 (1-89)||(10529379-10529466)
chr3 (139-283)||(29905888-29906035)
chr3 (139-283)||(29947053-29947200)
chr3 (139-283)||(29996207-29996354)
chr3 (6-88)||(51989062-51989145)
chr3 (139-283)||(17281132-17281281)
chr3 (156-282)||(37412813-37412937)
chr3 (150-283)||(16665826-16665965)
chr3 (173-283)||(23680117-23680229)
chr3 (173-283)||(24052354-24052466)
chr3 (201-283)||(15650788-15650871)
chr3 (173-283)||(15662423-15662536)
chr3 (188-283)||(27173245-27173341)
chr3 (201-283)||(8758198-8758281)
chr3 (204-283)||(13977956-13978035)
chr3 (204-283)||(15833627-15833706)
chr3 (204-283)||(15851173-15851252)
chr3 (121-283)||(17961710-17961876)
chr3 (139-236)||(13198990-13199091)
chr3 (4-89)||(22151282-22151368)
chr3 (187-283)||(934049-934145)
chr3 (135-283)||(9006207-9006361)
chr3 (139-282)||(14581524-14581664)
chr3 (173-283)||(19887071-19887183)
chr3 (173-283)||(29933283-29933394)
chr3 (173-283)||(29982437-29982548)
chr3 (1-89)||(13148299-13148388)
chr3 (139-283)||(16391315-16391462)
chr3 (201-283)||(1054144-1054227)
chr3 (204-283)||(9536031-9536109)
chr3 (204-283)||(10529567-10529646)
chr3 (173-283)||(11216439-11216550)
chr3 (201-283)||(29460931-29461011)
chr3 (201-283)||(29471783-29471863)
chr3 (139-236)||(16670892-16670993)
chr3 (173-283)||(17909719-17909831)
chr3 (201-283)||(23636147-23636228)
chr3 (127-236)||(27883757-27883870)
chr3 (1-89)||(15833437-15833526)
chr3 (1-89)||(15851043-15851132)
chr3 (134-236)||(16348380-16348487)
chr3 (121-253)||(18006655-18006790)
chr3 (5-76)||(27173064-27173135)
chr3 (204-283)||(28169504-28169581)
chr3 (150-254)||(11167871-11167980)
chr3 (6-68)||(21736343-21736406)
chr3 (6-88)||(31113905-31113988)
chr3 (204-282)||(9699908-9699985)
chr3 (173-283)||(48337647-48337759)
chr3 (6-89)||(41045780-41045865)
chr3 (157-229)||(14955650-14955720)
chr3 (6-76)||(2246600-2246671)
chr3 (139-283)||(7794307-7794455)
chr3 (201-283)||(14321399-14321479)
chr3 (201-283)||(18851409-18851489)
chr3 (129-236)||(1783816-1783928)
chr3 (139-230)||(4457302-4457398)
chr3 (150-236)||(4404670-4404761)
chr3 (6-76)||(13199173-13199244)
chr3 (201-236)||(13372432-13372467)
chr3 (201-236)||(13383026-13383061)
chr3 (201-236)||(13393620-13393655)
chr3 (201-236)||(14254141-14254176)
chr3 (240-283)||(16670862-16670905)
chr3 (201-236)||(39672645-39672680)
chr3 (183-236)||(6490111-6490165)
chr3 (183-236)||(6500765-6500819)
chr3 (201-251)||(13558012-13558062)
chr3 (204-282)||(40851197-40851274)
chr3 (171-236)||(10626703-10626771)
chr3 (6-64)||(17281375-17281435)
chr3 (112-169)||(23680218-23680275)
chr3 (112-169)||(24052455-24052512)
chr3 (202-235)||(38315153-38315186)
chr3 (183-230)||(9981654-9981702)
chr3 (183-230)||(9993662-9993710)
[»] chr4 (64 HSPs)
chr4 (118-282)||(18006792-18006957)
chr4 (6-283)||(19244030-19244313)
chr4 (112-283)||(8996985-8997160)
chr4 (112-283)||(23509495-23509670)
chr4 (173-283)||(16819096-16819208)
chr4 (127-283)||(10300927-10301088)
chr4 (139-283)||(11536250-11536399)
chr4 (139-283)||(39525866-39526015)
chr4 (139-283)||(11515439-11515588)
chr4 (173-280)||(18774403-18774512)
chr4 (1-89)||(36210053-36210141)
chr4 (173-283)||(55651747-55651860)
chr4 (6-88)||(14778388-14778471)
chr4 (201-283)||(49001702-49001785)
chr4 (134-283)||(14835810-14835962)
chr4 (6-88)||(14710724-14710807)
chr4 (171-283)||(19581682-19581794)
chr4 (157-282)||(17700597-17700719)
chr4 (6-89)||(17993737-17993822)
chr4 (171-283)||(4987714-4987826)
chr4 (171-283)||(5873810-5873922)
chr4 (201-283)||(47151802-47151882)
chr4 (6-88)||(18007006-18007088)
chr4 (171-283)||(15207120-15207232)
chr4 (201-283)||(17198145-17198225)
chr4 (150-283)||(24713847-24713977)
chr4 (173-283)||(25657561-25657672)
chr4 (157-283)||(3499448-3499571)
chr4 (201-283)||(8182598-8182679)
chr4 (201-283)||(18077628-18077709)
chr4 (6-89)||(16819296-16819381)
chr4 (1-89)||(33378439-33378528)
chr4 (204-283)||(9751348-9751426)
chr4 (204-283)||(15474950-15475029)
chr4 (6-76)||(18774613-18774684)
chr4 (201-283)||(40454072-40454152)
chr4 (6-64)||(55651576-55651635)
chr4 (204-282)||(27188467-27188544)
chr4 (6-58)||(49001933-49001986)
chr4 (188-283)||(16305547-16305642)
chr4 (204-283)||(40470328-40470405)
chr4 (201-283)||(31266520-31266603)
chr4 (187-236)||(10696081-10696131)
chr4 (187-236)||(10909850-10909900)
chr4 (112-169)||(16819197-16819254)
chr4 (188-283)||(16317772-16317867)
chr4 (201-236)||(451033-451068)
chr4 (201-236)||(461614-461649)
chr4 (204-279)||(1672652-1672727)
chr4 (204-279)||(1675127-1675202)
chr4 (201-236)||(14843421-14843456)
chr4 (201-236)||(17918509-17918544)
chr4 (171-236)||(19944078-19944145)
chr4 (201-236)||(30926262-30926297)
chr4 (201-236)||(30936840-30936875)
chr4 (183-236)||(18752257-18752311)
chr4 (183-236)||(18762867-18762921)
chr4 (201-251)||(20648387-20648437)
chr4 (39-76)||(8997214-8997251)
chr4 (6-64)||(11536097-11536157)
chr4 (205-282)||(39419544-39419621)
chr4 (205-282)||(40860907-40860983)
chr4 (171-229)||(3390895-3390955)
chr4 (224-283)||(11519560-11519620)
[»] chr8 (57 HSPs)
chr8 (110-283)||(19461317-19461492)
chr8 (110-283)||(19558995-19559170)
chr8 (112-276)||(22166766-22166934)
chr8 (139-276)||(23783711-23783852)
chr8 (139-283)||(23370945-23371093)
chr8 (156-283)||(3833139-3833271)
chr8 (173-276)||(22135617-22135723)
chr8 (173-283)||(3843938-3844051)
chr8 (173-283)||(22211139-22211252)
chr8 (5-89)||(8032063-8032147)
chr8 (174-283)||(20259369-20259481)
chr8 (174-283)||(21045999-21046111)
chr8 (6-89)||(23271156-23271240)
chr8 (189-283)||(7018151-7018246)
chr8 (201-279)||(23380769-23380848)
chr8 (129-283)||(18768872-18769029)
chr8 (171-283)||(16747434-16747546)
chr8 (139-283)||(31215413-31215561)
chr8 (89-283)||(28903591-28903788)
chr8 (1-86)||(40003255-40003341)
chr8 (201-283)||(3844259-3844342)
chr8 (6-76)||(19461193-19461264)
chr8 (6-76)||(19558871-19558942)
chr8 (173-283)||(19418769-19418881)
chr8 (173-283)||(19429346-19429458)
chr8 (200-283)||(22623118-22623203)
chr8 (174-283)||(23269644-23269753)
chr8 (204-283)||(1745382-1745460)
chr8 (201-283)||(20160981-20161061)
chr8 (201-283)||(20196406-20196486)
chr8 (201-283)||(30314448-30314528)
chr8 (173-283)||(19225351-19225463)
chr8 (204-282)||(21288625-21288703)
chr8 (6-70)||(7018352-7018417)
chr8 (1-89)||(17519094-17519183)
chr8 (211-283)||(26734766-26734836)
chr8 (1-89)||(29379604-29379693)
chr8 (189-283)||(40212910-40213004)
chr8 (173-282)||(43774085-43774192)
chr8 (155-197)||(43774082-43774124)
chr8 (6-64)||(3843767-3843826)
chr8 (201-283)||(18158704-18158784)
chr8 (6-76)||(22135823-22135894)
chr8 (6-76)||(22166988-22167059)
chr8 (6-76)||(23370793-23370864)
chr8 (204-282)||(13430479-13430556)
chr8 (112-169)||(22211241-22211298)
chr8 (157-229)||(36105411-36105481)
chr8 (201-236)||(3221081-3221116)
chr8 (171-236)||(18154170-18154237)
chr8 (6-64)||(20259594-20259653)
chr8 (6-64)||(21046224-21046283)
chr8 (158-282)||(15335887-15336007)
chr8 (158-282)||(15424952-15425072)
chr8 (158-282)||(15516256-15516376)
chr8 (112-169)||(22135712-22135769)
chr8 (157-197)||(17797638-17797677)
[»] scaffold0254 (1 HSPs)
scaffold0254 (6-283)||(22078-22359)
[»] chr5 (64 HSPs)
chr5 (112-280)||(36096932-36097103)
chr5 (112-280)||(36095475-36095646)
chr5 (112-283)||(13523349-13523524)
chr5 (112-283)||(13534076-13534251)
chr5 (139-283)||(32754240-32754388)
chr5 (173-283)||(20167903-20168014)
chr5 (171-283)||(35542930-35543044)
chr5 (139-283)||(20624585-20624733)
chr5 (1-89)||(20215135-20215223)
chr5 (134-283)||(21414485-21414639)
chr5 (139-283)||(24983713-24983861)
chr5 (1-89)||(1915447-1915535)
chr5 (6-89)||(40228693-40228776)
chr5 (173-283)||(20416739-20416852)
chr5 (127-283)||(37406476-37406635)
chr5 (9-89)||(40032789-40032869)
chr5 (201-283)||(105954-106037)
chr5 (6-88)||(13405150-13405233)
chr5 (139-283)||(20562160-20562308)
chr5 (171-283)||(23392536-23392649)
chr5 (139-283)||(17457604-17457752)
chr5 (134-283)||(19477822-19477974)
chr5 (187-283)||(36084298-36084394)
chr5 (187-283)||(43622198-43622294)
chr5 (5-76)||(20168115-20168187)
chr5 (204-282)||(21660454-21660532)
chr5 (173-283)||(24926451-24926563)
chr5 (139-283)||(17446988-17447136)
chr5 (204-283)||(21703458-21703535)
chr5 (201-283)||(1109488-1109568)
chr5 (173-283)||(8521679-8521790)
chr5 (201-283)||(21706319-21706399)
chr5 (201-283)||(20551652-20551733)
chr5 (201-283)||(20797532-20797613)
chr5 (201-283)||(23406283-23406364)
chr5 (201-283)||(34051796-34051877)
chr5 (173-283)||(36228576-36228688)
chr5 (134-283)||(19463792-19463944)
chr5 (139-283)||(30070198-30070345)
chr5 (139-283)||(31418482-31418629)
chr5 (139-283)||(31448373-31448520)
chr5 (201-283)||(1122246-1122326)
chr5 (6-68)||(13533950-13534013)
chr5 (6-76)||(36095701-36095772)
chr5 (6-76)||(36097158-36097229)
chr5 (173-283)||(23478575-23478684)
chr5 (201-283)||(34062457-34062538)
chr5 (201-283)||(43044014-43044095)
chr5 (6-64)||(20416964-20417023)
chr5 (129-236)||(21519925-21520037)
chr5 (157-199)||(23478574-23478616)
chr5 (112-169)||(35543065-35543122)
chr5 (6-68)||(13523223-13523286)
chr5 (201-236)||(15993672-15993707)
chr5 (201-236)||(16004234-16004269)
chr5 (1-71)||(23478399-23478470)
chr5 (201-236)||(27623110-27623145)
chr5 (6-64)||(32754084-32754143)
chr5 (204-282)||(3245267-3245344)
chr5 (183-236)||(10754376-10754430)
chr5 (201-251)||(34771779-34771829)
chr5 (201-251)||(34782724-34782774)
chr5 (6-64)||(106180-106240)
chr5 (240-283)||(42394835-42394876)
[»] chr7 (52 HSPs)
chr7 (112-283)||(24882201-24882376)
chr7 (110-283)||(3476121-3476299)
chr7 (139-283)||(18419486-18419635)
chr7 (173-283)||(6044008-6044121)
chr7 (173-283)||(8933910-8934023)
chr7 (173-283)||(13682710-13682823)
chr7 (173-283)||(15216706-15216819)
chr7 (173-283)||(26209346-26209459)
chr7 (1-85)||(13174606-13174690)
chr7 (155-283)||(48805702-48805828)
chr7 (139-283)||(589584-589732)
chr7 (173-283)||(38593533-38593644)
chr7 (139-283)||(18441567-18441716)
chr7 (6-85)||(8998935-8999015)
chr7 (6-86)||(11087045-11087125)
chr7 (173-283)||(12733964-12734077)
chr7 (173-283)||(29590382-29590495)
chr7 (134-283)||(48382512-48382665)
chr7 (173-283)||(1368020-1368132)
chr7 (173-283)||(21769740-21769852)
chr7 (157-282)||(4428902-4429025)
chr7 (188-283)||(25201381-25201475)
chr7 (171-283)||(9160118-9160232)
chr7 (171-283)||(9170573-9170687)
chr7 (171-283)||(9171374-9171488)
chr7 (173-283)||(19193290-19193401)
chr7 (6-76)||(29590211-29590282)
chr7 (201-283)||(44280918-44280998)
chr7 (157-282)||(4411786-4411909)
chr7 (205-282)||(24794588-24794664)
chr7 (139-256)||(15888135-15888257)
chr7 (201-283)||(3166156-3166236)
chr7 (6-76)||(3476351-3476422)
chr7 (6-68)||(24882439-24882502)
chr7 (6-76)||(13682539-13682610)
chr7 (6-64)||(26209571-26209630)
chr7 (201-283)||(31116308-31116389)
chr7 (6-64)||(8933738-8933798)
chr7 (6-64)||(48382364-48382424)
chr7 (201-236)||(454642-454677)
chr7 (201-236)||(467424-467459)
chr7 (171-236)||(9444248-9444317)
chr7 (201-236)||(11096477-11096512)
chr7 (6-64)||(12734189-12734248)
chr7 (171-236)||(20990041-20990110)
chr7 (171-236)||(21002851-21002920)
chr7 (171-236)||(23264434-23264503)
chr7 (201-251)||(14745497-14745547)
chr7 (204-282)||(19339105-19339182)
chr7 (173-283)||(40054551-40054662)
chr7 (204-280)||(5826199-5826274)
chr7 (185-236)||(9433669-9433721)
[»] chr6 (80 HSPs)
chr6 (112-283)||(12952842-12953017)
chr6 (114-283)||(31931734-31931907)
chr6 (139-283)||(11235835-11235982)
chr6 (112-281)||(11206255-11206427)
chr6 (173-283)||(18498975-18499088)
chr6 (173-283)||(18555625-18555738)
chr6 (139-283)||(18825949-18826098)
chr6 (139-283)||(25519024-25519173)
chr6 (6-88)||(7586186-7586269)
chr6 (173-283)||(30401327-30401439)
chr6 (129-283)||(18925473-18925631)
chr6 (110-236)||(9933430-9933560)
chr6 (29-88)||(11525647-11525706)
chr6 (173-283)||(20635932-20636041)
chr6 (110-283)||(17741413-17741592)
chr6 (204-283)||(17608154-17608233)
chr6 (173-283)||(21128435-21128545)
chr6 (173-283)||(20029632-20029744)
chr6 (173-283)||(20062383-20062495)
chr6 (139-283)||(25675499-25675647)
chr6 (139-283)||(25679575-25679723)
chr6 (139-283)||(29765871-29766019)
chr6 (173-275)||(19289117-19289221)
chr6 (112-197)||(19289180-19289267)
chr6 (6-89)||(21128264-21128348)
chr6 (188-283)||(30119975-30120070)
chr6 (6-76)||(19289322-19289393)
chr6 (150-283)||(22309138-22309276)
chr6 (139-283)||(32761643-32761791)
chr6 (127-236)||(4293050-4293163)
chr6 (201-283)||(12828080-12828161)
chr6 (173-283)||(22387011-22387120)
chr6 (139-283)||(25722668-25722816)
chr6 (139-283)||(25735268-25735416)
chr6 (201-283)||(25788088-25788169)
chr6 (139-236)||(31572750-31572851)
chr6 (188-283)||(17047916-17048013)
chr6 (201-283)||(5845487-5845567)
chr6 (171-283)||(8654034-8654146)
chr6 (171-280)||(11146963-11147073)
chr6 (6-68)||(11206129-11206192)
chr6 (201-283)||(7375486-7375567)
chr6 (201-283)||(10402829-10402910)
chr6 (129-283)||(17577508-17577665)
chr6 (1-85)||(20635753-20635838)
chr6 (205-282)||(17043011-17043090)
chr6 (158-282)||(19482964-19483085)
chr6 (172-283)||(25686445-25686557)
chr6 (171-283)||(25986453-25986565)
chr6 (155-282)||(26589815-26589939)
chr6 (135-278)||(17064527-17064675)
chr6 (201-266)||(18834379-18834445)
chr6 (134-254)||(17745505-17745629)
chr6 (139-283)||(27166155-27166303)
chr6 (6-65)||(11235682-11235742)
chr6 (6-89)||(17608334-17608418)
chr6 (5-64)||(17047737-17047795)
chr6 (6-68)||(18555453-18555516)
chr6 (6-68)||(31931606-31931669)
chr6 (204-282)||(19065860-19065937)
chr6 (6-64)||(9933624-9933684)
chr6 (189-283)||(16123254-16123348)
chr6 (112-169)||(18498929-18498986)
chr6 (5-76)||(25675343-25675416)
chr6 (157-197)||(22387010-22387050)
chr6 (171-236)||(9112268-9112337)
chr6 (171-236)||(9122905-9122974)
chr6 (6-68)||(12953080-12953143)
chr6 (201-236)||(13913435-13913470)
chr6 (201-236)||(13928574-13928609)
chr6 (6-76)||(18498803-18498874)
chr6 (1-60)||(22386836-22386895)
chr6 (6-64)||(25518873-25518932)
chr6 (6-64)||(4292909-4292969)
chr6 (241-282)||(17316389-17316429)
chr6 (6-58)||(17741662-17741715)
chr6 (5-64)||(25679419-25679480)
chr6 (5-64)||(25735511-25735572)
chr6 (204-236)||(16877452-16877484)
chr6 (6-64)||(25686702-25686762)
[»] chr1 (61 HSPs)
chr1 (6-275)||(28474264-28474538)
chr1 (112-283)||(20883625-20883801)
chr1 (112-283)||(45070398-45070572)
chr1 (112-283)||(20799226-20799402)
chr1 (189-283)||(23927268-23927364)
chr1 (110-283)||(18310715-18310893)
chr1 (139-283)||(675760-675908)
chr1 (156-283)||(22609736-22609868)
chr1 (173-283)||(46180639-46180752)
chr1 (135-283)||(12947026-12947180)
chr1 (6-88)||(23064986-23065069)
chr1 (6-88)||(19038044-19038127)
chr1 (10-89)||(20251815-20251894)
chr1 (127-283)||(11194811-11194971)
chr1 (1-89)||(26548215-26548304)
chr1 (157-282)||(34255278-34255400)
chr1 (110-283)||(14387869-14388047)
chr1 (6-89)||(28380032-28380115)
chr1 (173-283)||(39193854-39193966)
chr1 (129-283)||(47195567-47195724)
chr1 (6-74)||(5929740-5929809)
chr1 (188-283)||(9050231-9050325)
chr1 (1-89)||(22019369-22019458)
chr1 (1-89)||(22642928-22643017)
chr1 (110-249)||(41132393-41132537)
chr1 (6-89)||(52350644-52350729)
chr1 (1-88)||(44201044-44201132)
chr1 (157-283)||(17371249-17371374)
chr1 (173-266)||(19170113-19170206)
chr1 (1-89)||(22655510-22655599)
chr1 (203-283)||(26576986-26577065)
chr1 (201-283)||(147975-148055)
chr1 (201-283)||(154050-154130)
chr1 (201-283)||(5974130-5974210)
chr1 (134-283)||(7689199-7689354)
chr1 (204-283)||(21544252-21544331)
chr1 (201-283)||(39587335-39587415)
chr1 (201-283)||(20441077-20441158)
chr1 (173-282)||(19215808-19215914)
chr1 (204-283)||(37642478-37642556)
chr1 (6-68)||(46180861-46180924)
chr1 (5-70)||(45070633-45070699)
chr1 (189-283)||(17957603-17957697)
chr1 (6-68)||(20799101-20799164)
chr1 (6-64)||(14388111-14388171)
chr1 (1-89)||(17371075-17371164)
chr1 (6-64)||(18310957-18311017)
chr1 (171-236)||(18381709-18381777)
chr1 (6-64)||(675608-675667)
chr1 (201-236)||(12730913-12730948)
chr1 (201-236)||(12741506-12741541)
chr1 (201-283)||(21895568-21895648)
chr1 (171-236)||(35013254-35013323)
chr1 (6-64)||(41132601-41132660)
chr1 (114-169)||(46180741-46180796)
chr1 (1-59)||(19170324-19170381)
chr1 (159-197)||(21204748-21204786)
chr1 (204-282)||(23024998-23025075)
chr1 (9-89)||(21544070-21544151)
chr1 (171-230)||(23580138-23580201)
chr1 (204-236)||(12897789-12897821)
[»] scaffold0163 (2 HSPs)
scaffold0163 (112-283)||(29816-29992)
scaffold0163 (187-283)||(36538-36634)
[»] scaffold0774 (2 HSPs)
scaffold0774 (112-283)||(6104-6279)
scaffold0774 (6-68)||(6342-6405)
[»] scaffold0752 (2 HSPs)
scaffold0752 (112-283)||(2161-2335)
scaffold0752 (5-76)||(2034-2106)
[»] scaffold0016 (1 HSPs)
scaffold0016 (139-283)||(163493-163641)
[»] scaffold0154 (2 HSPs)
scaffold0154 (112-283)||(35877-36053)
scaffold0154 (6-76)||(35752-35823)
[»] scaffold0042 (2 HSPs)
scaffold0042 (139-283)||(13058-13207)
scaffold0042 (173-283)||(5682-5795)
[»] scaffold0547 (3 HSPs)
scaffold0547 (173-283)||(1106-1218)
scaffold0547 (6-89)||(933-1018)
scaffold0547 (112-169)||(1060-1117)
[»] scaffold0604 (1 HSPs)
scaffold0604 (110-283)||(84-262)
[»] scaffold0063 (1 HSPs)
scaffold0063 (110-283)||(15205-15383)
[»] scaffold0497 (1 HSPs)
scaffold0497 (139-283)||(10027-10176)
[»] scaffold0407 (3 HSPs)
scaffold0407 (139-283)||(11855-12004)
scaffold0407 (127-283)||(15686-15847)
scaffold0407 (6-64)||(12097-12157)
[»] scaffold0739 (2 HSPs)
scaffold0739 (110-283)||(2332-2509)
scaffold0739 (6-76)||(2209-2280)
[»] scaffold0084 (1 HSPs)
scaffold0084 (150-283)||(56520-56658)
[»] scaffold0040 (1 HSPs)
scaffold0040 (110-283)||(69935-70113)
[»] scaffold0410 (2 HSPs)
scaffold0410 (172-283)||(6942-7056)
scaffold0410 (6-64)||(15944-16003)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-89)||(61766-61854)
[»] scaffold0481 (2 HSPs)
scaffold0481 (139-283)||(12564-12713)
scaffold0481 (6-76)||(12795-12866)
[»] scaffold0007 (2 HSPs)
scaffold0007 (173-283)||(59048-59161)
scaffold0007 (6-76)||(59262-59333)
[»] scaffold0422 (2 HSPs)
scaffold0422 (204-283)||(11984-12063)
scaffold0422 (1-85)||(11794-11879)
[»] scaffold0201 (3 HSPs)
scaffold0201 (127-283)||(7586-7745)
scaffold0201 (201-283)||(7108-7188)
scaffold0201 (6-64)||(7445-7505)
[»] scaffold0073 (3 HSPs)
scaffold0073 (201-283)||(58718-58801)
scaffold0073 (6-68)||(58516-58579)
scaffold0073 (112-169)||(58642-58699)
[»] scaffold0005 (1 HSPs)
scaffold0005 (6-88)||(61259-61342)
[»] scaffold0077 (1 HSPs)
scaffold0077 (129-283)||(34899-35056)
[»] scaffold0047 (2 HSPs)
scaffold0047 (134-283)||(32644-32796)
scaffold0047 (201-236)||(40255-40290)
[»] scaffold0090 (4 HSPs)
scaffold0090 (204-283)||(1048-1128)
scaffold0090 (204-283)||(5428-5508)
scaffold0090 (6-76)||(861-932)
scaffold0090 (6-76)||(5241-5312)
[»] scaffold0226 (2 HSPs)
scaffold0226 (171-283)||(18958-19070)
scaffold0226 (171-283)||(28352-28464)
[»] scaffold0216 (1 HSPs)
scaffold0216 (171-283)||(343-455)
[»] scaffold0177 (2 HSPs)
scaffold0177 (204-283)||(20185-20264)
scaffold0177 (1-60)||(20395-20454)
[»] scaffold0072 (1 HSPs)
scaffold0072 (129-283)||(36475-36632)
[»] scaffold0655 (1 HSPs)
scaffold0655 (1-89)||(5151-5240)
[»] scaffold0414 (2 HSPs)
scaffold0414 (188-283)||(2709-2803)
scaffold0414 (173-282)||(6936-7042)
[»] scaffold1204 (1 HSPs)
scaffold1204 (201-283)||(2174-2254)
[»] scaffold0391 (1 HSPs)
scaffold0391 (171-283)||(1976-2089)
[»] scaffold1477 (1 HSPs)
scaffold1477 (188-283)||(1434-1528)
[»] scaffold0151 (1 HSPs)
scaffold0151 (155-283)||(11583-11709)
[»] scaffold0002 (4 HSPs)
scaffold0002 (1-89)||(156614-156703)
scaffold0002 (1-89)||(481758-481847)
scaffold0002 (201-257)||(347428-347484)
scaffold0002 (171-283)||(117502-117614)
[»] scaffold2108 (1 HSPs)
scaffold2108 (188-283)||(2-97)
[»] scaffold0068 (2 HSPs)
scaffold0068 (204-283)||(10375-10452)
scaffold0068 (201-283)||(7511-7591)
[»] scaffold0544 (1 HSPs)
scaffold0544 (186-247)||(9695-9758)
[»] scaffold0272 (2 HSPs)
scaffold0272 (171-283)||(13042-13154)
scaffold0272 (171-283)||(13347-13459)
[»] scaffold0267 (1 HSPs)
scaffold0267 (201-283)||(5959-6040)
[»] scaffold1321 (1 HSPs)
scaffold1321 (1-88)||(924-1012)
[»] scaffold1263 (1 HSPs)
scaffold1263 (1-88)||(1117-1205)
[»] scaffold0767 (1 HSPs)
scaffold0767 (204-283)||(5013-5090)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-88)||(6511-6599)
[»] scaffold0133 (1 HSPs)
scaffold0133 (139-283)||(42260-42408)
[»] scaffold0050 (1 HSPs)
scaffold0050 (204-266)||(35456-35518)
[»] scaffold0387 (1 HSPs)
scaffold0387 (206-283)||(7628-7704)
[»] scaffold0056 (1 HSPs)
scaffold0056 (155-197)||(25522-25563)
[»] scaffold0747 (1 HSPs)
scaffold0747 (187-251)||(3203-3268)
[»] scaffold0570 (3 HSPs)
scaffold0570 (3-56)||(1694-1747)
scaffold0570 (241-278)||(1470-1507)
scaffold0570 (157-197)||(1524-1565)
[»] scaffold0314 (2 HSPs)
scaffold0314 (201-254)||(20558-20611)
scaffold0314 (224-283)||(20514-20571)
[»] scaffold0069 (1 HSPs)
scaffold0069 (205-282)||(5142-5219)
[»] scaffold0471 (1 HSPs)
scaffold0471 (157-229)||(3528-3598)
[»] scaffold0217 (1 HSPs)
scaffold0217 (157-229)||(21948-22018)
[»] scaffold0083 (1 HSPs)
scaffold0083 (183-230)||(53435-53483)
[»] scaffold0028 (1 HSPs)
scaffold0028 (155-236)||(14950-15038)
[»] scaffold0001 (1 HSPs)
scaffold0001 (32-68)||(28774-28810)
[»] scaffold1102 (1 HSPs)
scaffold1102 (240-283)||(2834-2877)
[»] scaffold0386 (1 HSPs)
scaffold0386 (201-236)||(12775-12810)
[»] scaffold0334 (1 HSPs)
scaffold0334 (171-236)||(19595-19664)
[»] scaffold0527 (2 HSPs)
scaffold0527 (204-282)||(107-184)
scaffold0527 (204-282)||(8170-8247)
[»] scaffold0102 (1 HSPs)
scaffold0102 (139-254)||(51869-51989)
[»] scaffold0099 (1 HSPs)
scaffold0099 (139-230)||(19623-19721)
[»] scaffold0178 (1 HSPs)
scaffold0178 (240-283)||(27179-27220)


Alignment Details
Target: scaffold0017 (Bit Score: 159; Significance: 1e-84; HSPs: 7)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 6 - 283
Target Start/End: Complemental strand, 40386 - 40089
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct---------------- 88  Q
    ||||||||||||||||||  || ||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||                    
T  40386 ttgtactttgtcaactcttcaacaaaagataagcacccagtgcttttcaaatgaacgttggcaccttcctttgagtctttcactctcttagatgaggtta 40287  T
Q  89 --tccaataaacagccattttatacttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatgaact 186  Q
      |||||||||||||||||| | |||||||||||||||| |||||| | || |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  40286 aatccaataaacagccatttgaaacttcagattgaatcttctgatcaactgtagcttctggtaatgatatagcttctgacgaagttgcttctgatgaact 40187  T
Q  187 ttgcttctgataagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40186 ttgcttctgatgagttctgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcactttaaaacttcagacgcagttttcttcagat 40089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 283
Target Start/End: Original strand, 180592 - 180754
Alignment:
Q  127 ctgatcgattgaagcttctgataatgatatagcttctgat--gaagttgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcatt 222  Q
    |||||| |||| |||||||| | |||||||||||||||||   ||  |||||||||||  ||| |||||||||| || ||||||||||||||||||||||    
T  180592 ctgatcaattgcagcttctggtgatgatatagcttctgataaaaatgtgcttctgatgctcttctgcttctgatgaacttctgcttctgatgacgtcatt 180691  T
Q  223 acttcagaggcac--tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
     ||||||||||||  ||  ||||||||||||||||    ||||||||||||||||||||||||    
T  180692 tcttcagaggcactttgttacttcagaagcacttcttggcttcagacgcagttttcttcagat 180754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 58932 - 58750
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct---------------- 88  Q
    ||||||||||||||||||  || ||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||||||                    
T  58932 ttgtactttgtcaactcttcaacaaaagataagcacccagtgcttttcaaatgaacgttggcaccttcgtttgagtctttcgctctcttagacgaggtta 58833  T
Q  89 --tccaataaacagccattttatacttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa 169  Q
      |||||||||||||||||| | |||||||||||||||| |||||| | || |||||||| | | ||||||||||||||||||    
T  58832 aatccaataaacagccatttgaaacttcagattgaatcttctgatcaactgtagcttctggtgacgatatagcttctgatgaa 58750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 283
Target Start/End: Original strand, 175680 - 175842
Alignment:
Q  127 ctgatcgattgaagcttctgataatgatatagcttctgatgaagttg--cttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcatt 222  Q
    |||||| |||| |||||||| | |||||| |||||||||| ||  ||  |||||||||  ||| |||||||||| || ||||||||||||||||||||||    
T  175680 ctgatcaattgcagcttctggtgatgatacagcttctgataaaaatgtccttctgatgctcttctgcttctgatgaacttctgcttctgatgacgtcatt 175779  T
Q  223 acttcagaggcac--tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
     ||||||||||||  ||  |||| |||||||||||    ||||||| ||||||||||||||||    
T  175780 tcttcagaggcactttgttactttagaagcacttcttggcttcagatgcagttttcttcagat 175842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 175539 - 175599
Alignment:
Q  6 ttgtactttgtcaactctgaataa--aggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  ||  |||||||| | |||||||||||||||||| |||||    
T  175539 ttgtactttgtcaactctgatgaagaaggacaagtatccaatgcttttcaaatgaccgttg 175599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 180451 - 180511
Alignment:
Q  6 ttgtactttgtcaactctgaataa--aggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  ||  |||||||| | |||||||||||||||||| |||||    
T  180451 ttgtactttgtcaactctgatgaagaaggacaagtatccaatgcttttcaaatgaccgttg 180511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 58746 - 58714
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||| |||||||||||||||||||||||||    
T  58746 tgcttctaatgacgtcattacttcagaggcact 58714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 9330 - 9631
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt----------- 89  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||               
T  9330 acactttgtactttgtcaactctcaatgaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccatttagtctttcgctttcttagatgag 9429  T
Q  90 -------ccaataaacagccattttatacttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatg 182  Q
           |||||||||||| |||| | ||||||| | |||||| || ||| | || |||||||| | |||||||||||||||||||||||||||||||||    
T  9430 gttgaatccaataaacagctatttgaaacttcaggtagaatctactaatcaactgtagcttctggtgatgatatagcttctgatgaagttgcttctgatg 9529  T
Q  183 aactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcag 281  Q
    ||||||||||||| | |||||||||||||||||||||||  | |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  9530 aactttgcttctggtgagttctgcttctgatgacgtcatctcatcagaggcacttgaaacttcagaagcacttcaaaacttcagacacagttttcttcag 9629  T
Q  282 at 283  Q
    ||    
T  9630 at 9631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 147; Significance: 1e-77; HSPs: 4)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 6 - 280
Target Start/End: Complemental strand, 7691 - 7395
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt--------------- 89  Q
    ||||||||||||||||||  || |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||                   
T  7691 ttgtactttgtcaactcttcaacaaaggataagcacccagtgcttttcaaatgaacgttggcaccttcctttgagtctttcgctttcttagacaaggtta 7592  T
Q  90 ---ccaataaacagccattttatacttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatgaact 186  Q
       |||||||||| |||||| | |||||||||||||||| |||||| | || |||||||||| | |||||||||||||||||||||||||||||||||||    
T  7591 aatccaataaacaaccatttgaaacttcagattgaatcttctgatcaactgtagcttctgatgacgatatagcttctgatgaagttgcttctgatgaact 7492  T
Q  187 ttgcttctgataagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaa--acttcagacgcagttttcttca 280  Q
    ||||||||||| |||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  7491 ttgcttctgatgagttttgcttctgatgatgtcattacttcagaggcacttgaaacttcagaagcacttcaaaagacttcagacgcagttttcttca 7395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 150 - 283
Target Start/End: Original strand, 141183 - 141320
Alignment:
Q  150 atgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcac--tgaaactt 243  Q
    |||||||||||||||||||| |  ||||||||||| |||| |||||||||| || ||||||||||||||||||||| |||||| ||||||  |||   ||    
T  141183 atgatatagcttctgatgaaatattgcttctgatggacttctgcttctgatgaacttctgcttctgatgacgtcatcacttcacaggcactttgagggtt 141282  T
Q  244 cagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||   | ||||||||||||||||||||||||    
T  141283 cagaagcactt--gagcttcagacgcagttttcttcagat 141320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 128032 - 128144
Alignment:
Q  173 gcttctgatgaact-ttgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcac--tgaaacttcagaagcacttcaaaacttcagacg 268  Q
    |||||||||||| | ||||||||||| || ||||||||||||||||||||| |||||||||||||  |||   |||||||||||||   | |||||||||    
T  128032 gcttctgatgaaatattgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcactttgagggttcagaagcactt--tagcttcagacg 128129  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  128130 cagttttcttcagat 128144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 128001 - 128074
Alignment:
Q  127 ctgatcgattgaagcttctgataatgatatagcttctgatgaa--gttgcttctgatgaactt-tgcttctgat 197  Q
    |||||| |||| |||||||| | ||||||||||||||||||||   ||||||||||||||||| ||||||||||    
T  128001 ctgatcaattgtagcttctggtgatgatatagcttctgatgaaatattgcttctgatgaacttctgcttctgat 128074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 17883 - 17582
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt----------- 89  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||               
T  17883 acactttgtactttgtcaactctcaatgaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttttagtctttcgctttcttagatgag 17784  T
Q  90 -------ccaataaacagccattttatacttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatg 182  Q
           |||||||||| | |||| | ||||||| | |||||| || ||| | || |||||||| | ||||||| |||| ||||||||||||||||||||    
T  17783 gttgaatccaataaacaactatttgaaacttcaggtagaatctactaatcaactgtagcttctggtgatgatattgcttatgatgaagttgcttctgatg 17684  T
Q  183 aactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcag 281  Q
    ||||||||||||| | ||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17683 aactttgcttctggtgagttctgcttctgatgatgtcatctcttcagaggcacttgaaacttcagaagcacttcaaaacttcagacgcagttttcttcag 17584  T
Q  282 at 283  Q
    ||    
T  17583 at 17582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 9e-73; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 89 - 283
Target Start/End: Original strand, 22755598 - 22755791
Alignment:
Q  89 tccaataaacagccattttatacttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatgaacttt 188  Q
    ||||||||||||||| || | ||||||||| ||||| || |||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  22755598 tccaataaacagccaattgaaacttcagat-gaatcagcagatcgattgaagcttctggtgatgatataacttctgatgaagttgcttctgatgaacttt 22755696  T
Q  189 gcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22755697 gcttctgatgggttctgcttctgatgacgtcattacttcagaggcattgaaacttcagaagcacttcaaaacttcagacgtagttttcttcagat 22755791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 118 - 282
Target Start/End: Complemental strand, 20646496 - 20646331
Alignment:
Q  118 ttgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacg 217  Q
    |||||||| |||||| | || |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  20646496 ttgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaagttgcttctgatgaactttgcttctgatgagttttgcttctgatgacg 20646397  T
Q  218 tcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  20646396 tcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcaggcgcagttttcttcaga 20646331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 114 - 283
Target Start/End: Complemental strand, 19312909 - 19312737
Alignment:
Q  114 cagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagtt--gcttctgatgaactttgcttctgataagttctgcttctg 211  Q
    |||||||||||| |||||  | || |||||||| | |||||||||||||||||||| ||  |||||||||||||||||||| |||| | |||||||||||    
T  19312909 cagattgaatcttctgattaactgtagcttctggtgatgatatagcttctgatgaaattttgcttctgatgaactttgcttatgatgacttctgcttctg 19312810  T
Q  212 atgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||| ||||||||||||||||||| ||| ||||||||| ||||||| | ||| ||||||||||||||||||||    
T  19312809 atgatgtcattacttcagaggcacttgacacttcagaaacacttcatagcttaagacgcagttttcttcagat 19312737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 156 - 283
Target Start/End: Complemental strand, 19297506 - 19297376
Alignment:
Q  156 tagcttctgatgaagtt--gcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcac 252  Q
    |||||||||||||| ||  ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||| |||    
T  19297506 tagcttctgatgaaattttgcttctgatgaactttgcttctgatgacttctgcttctgatgacgtcattacttcagaggcacttgacacttcagaaacac 19297407  T
Q  253 ttcaaaacttcagacgcagttttcttcagat 283  Q
    |||| | ||||||||||||||| ||||||||    
T  19297406 ttcatagcttcagacgcagtttccttcagat 19297376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 24275385 - 24275534
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  ||||||||||| |||| |||||||||| || ||||||||||||||||||||| ||||||||||||    
T  24275385 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggacttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggca 24275484  T
Q  235 ct-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |||||||||||||||||||| | |||||||||| |||||||||||||    
T  24275485 cttgaaacttcagaagcacttcatagcttcagacgctgttttcttcagat 24275534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 17969074 - 17968926
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcac 235  Q
    |||||||| | |||| | ||||||||||||| |  ||||||||||| |||||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  17969074 agcttctggtgatgacacagcttctgatgaaatcttgcttctgatggactttgcttctgatgatcttctgcttctgatgacgtcatcacttcagaggcac 17968975  T
Q  236 t-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | |||||||||||||||||||| | ||||||||||||||||||||||||    
T  17968974 ttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagat 17968926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 110 - 283
Target Start/End: Complemental strand, 967400 - 967222
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctg 205  Q
    ||||||| || ||| | |||||| | || |||||||| | |||||||||||||||||||| |  ||||||||||| | || ||||||||||  | |||||    
T  967400 acttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatggatttctgcttctgatggacttctg 967301  T
Q  206 cttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||| | ||||||||||||||||||| ||||    
T  967300 cttctgatgacgtcattacttcagaggcacttgtaacttcagaagcacttcatagcttcagacgcagttttctttagat 967222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 21025547 - 21025463
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21025547 ttgtactttgtcaactcttcaatgaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttttagtctttcgctt 21025463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 266
Target Start/End: Complemental strand, 23392577 - 23392467
Alignment:
Q  156 tagcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttc 255  Q
    |||||||||||||| ||||||||||||||||||||||||||| | || |||||||||||||||||| |||| |||||||||    |||||| ||||||||    
T  23392577 tagcttctgatgaacttgcttctgatgaactttgcttctgatgaattttgcttctgatgacgtcatcactttagaggcactttgtcttcaggagcacttc 23392478  T
Q  256 aaaacttcaga 266  Q
    | |||||||||    
T  23392477 ataacttcaga 23392467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 19497839 - 19497726
Alignment:
Q  173 gcttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | |||||||||||  | ||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||| | ||||||||||    
T  19497839 gcttctgatgaaatcttgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcaaaagcacttcatagcttcagacgc 19497740  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  19497739 agttttcttcagat 19497726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 21172333 - 21172185
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaacttt-gcttctgat-aagttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||||| ||||||||||||    ||||||||||||| |||| ||||||||| || |||||||||||||||| |||| |||||||| ||    
T  21172333 agcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgaccttttgcttctgatgaacttctgcttctgatgacatcatcacttcagatgc 21172234  T
Q  234 actgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  21172233 acttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 21172185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 280
Target Start/End: Original strand, 19356701 - 19356811
Alignment:
Q  173 gcttctgatgaact-ttgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcactga-aacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | ||||||||||| || |||||||||||||||||||||||||||| ||||||| | ||||||| || ||||||| | ||||||||||    
T  19356701 gcttctgatgaaatcttgcttctgatgaacttctgcttctgatgacgtcattacttcaaaggcacttataacttcaaaaacacttcatagcttcagacgc 19356800  T
Q  270 agttttcttca 280  Q
    |||||||||||    
T  19356801 agttttcttca 19356811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 134 - 283
Target Start/End: Complemental strand, 24425423 - 24425271
Alignment:
Q  134 attgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttca 228  Q
    |||| |||||||| | ||||| | ||||||||||||    ||||||||||||| ||| |||||||||| || |||| |||||||||||||||| ||||||    
T  24425423 attgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgagcttctacttctgatgacgtcatcacttca 24425324  T
Q  229 gaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  24425323 gaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 24425271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 24414870 - 24414759
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| ||||||||||||||  | ||||||||||||||   | ||||||||||    
T  24414870 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagcactt--tagcttcagacgc 24414773  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  24414772 agttttcttcagat 24414759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 26867469 - 26867581
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| |||||||||| || ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | |||||||||    
T  26867469 ttgcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagcactccagcttcagaagcactt--tagcttcagacg 26867566  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  26867567 cagttttcttcagat 26867581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 36784623 - 36784540
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||||||||||||| |||| |  ||||||||||||||||  | ||||||||||||||||||||||||    
T  36784623 ttctgcttctgatgacgtcattacttcagagacacttggtacttcagaagcacttcttagcttcagacgcagttttcttcagat 36784540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 18768754 - 18768642
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||  || ||||||||||    
T  18768754 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt-taagcttcagacgc 18768656  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  18768655 agttttcttcagat 18768642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 19498011 - 19497940
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  19498011 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcacctcccttt 19497940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 20417493 - 20417381
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| |||||||||| || ||||||| ||||||||||||| ||||||||||||||  | ||||||||||| ||   | |||||||||    
T  20417493 ttgcttctgatgaccttctgcttctgatgagcttctgctcctgatgacgtcatcacttcagaggcacttcagcttcagaagcattt--tagcttcagacg 20417396  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  20417395 cagttttcttcagat 20417381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 20646627 - 20646545
Alignment:
Q  6 ttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||||||  |  ||||||||||||||| |||||||||||| ||||||||||||| ||||| |||| ||||||    
T  20646627 ttgtactttgtcaactcttcaacaaggacaagcacccagtgcttttcaaattaacgttggcacctcccttttagtccttcgct 20646545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 28721164 - 28721052
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| ||| |||| |||||  | ||||||||||||||  || ||||||||||    
T  28721164 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcactccagatgcacttcagcttcagaagcactt-taagcttcagacgc 28721066  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  28721065 agttttcttcagat 28721052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 28731752 - 28731640
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| ||| |||| |||||  | ||||||||||||||  || ||||||||||    
T  28731752 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcactccagatgcacttcagcttcagaagcactt-taagcttcagacgc 28731654  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  28731653 agttttcttcagat 28731640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 26880058 - 26880170
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    |||||| |||||| ||| |||||||||| || ||||||||||||||||||||| |||||||| |||||  | ||||| ||||||||   | |||||||||    
T  26880058 ttgcttatgatgatcttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagcactccagcttcaaaagcactt--tagcttcagacg 26880155  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  26880156 cagttttcttcagat 26880170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 6081537 - 6081638
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | ||||||||||||||| |||| |  |||||||||||  ||| |||||||||| || |||||||||||||||||||||||||||||| |||    
T  6081537 agcttctggtgatgatatagcttctggtgaaatcttgcttctgatggtcttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaagca 6081636  T
Q  235 ct 236  Q
    ||    
T  6081637 ct 6081638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 22764017 - 22764165
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | ||||||||||||||||  || |  ||||||||||| |||| |||||||||| || |||| |||||||||||||||| ||||||||||||    
T  22764017 agcttctggtgatgatatagcttctgaaaaaatattgcttctgatggacttctgcttctgatgaacttctacttctgatgacgtcatcacttcagaggca 22764116  T
Q  235 ct-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |  | |||||||||||||  |  |||||||||| |||||||||||||    
T  22764117 cttgttagttcagaagcactttcag-cttcagacgctgttttcttcagat 22764165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 27978249 - 27978137
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag--ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | ||||||| ||||||||||||   ||||||||||||  ||| ||||||||||  | |||||||||||||||||||||||||||||| |||    
T  27978249 agcttctggtgatgatatcgcttctgatgaaaccttgcttctgatggtcttctgcttctgatgggcttctgcttctgatgacgtcattacttcagaagca 27978150  T
Q  235 ctgaaacttcaga 247  Q
    ||  |||||||||    
T  27978149 ctttaacttcaga 27978137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 28064778 - 28064666
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag--ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | ||||||| ||||||||||||   ||||||||||||  ||| ||||||||||  | |||||||||||||||||||||||||||||| |||    
T  28064778 agcttctggtgatgatatcgcttctgatgaaaccttgcttctgatggtcttctgcttctgatgggcttctgcttctgatgacgtcattacttcagaagca 28064679  T
Q  235 ctgaaacttcaga 247  Q
    ||  |||||||||    
T  28064678 ctttaacttcaga 28064666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24814655 - 24814567
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgct 88  Q
    |||||| ||||||||||||||||   | | ||||||||||||||||||||||||||||| ||||| |||||| | || |||||||||||    
T  24814655 acacttcgtactttgtcaactctctttgatggacaagcacccaatgcttttcaaatgaaccgttgccacctttcctttagtctttcgct 24814567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 19300030 - 19299959
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  ||| |||||||| |||||| |||||||||||||||||||| ||||| |||||    
T  19300030 ttgtactttgtcaactcttcaatgaaggacaaacacccagtgcttttcaaatgaacgttgacacctcccttt 19299959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 28374313 - 28374233
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||| ||||||   | ||||||||||||||||||||||||    
T  28374313 ttctgcttctgatgacgtcatcacttcagaagcactccagcttcagacgcactt--tagcttcagacgcagttttcttcagat 28374233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 967523 - 967464
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||| |||||    
T  967523 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttg 967464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 19313037 - 19312978
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  ||| |||||||||||| || ||||||||||||||||||||    
T  19313037 ttgtactttgtcaactcttcaatgaaggacaagcacacagtgcttttcaaatgaacgttg 19312978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 24275234 - 24275293
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||| |||||    
T  24275234 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttg 24275293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 28379652 - 28379572
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||| ||||| |||||||| |||||  | ||||||| ||||||   | ||||||||||||||||||||||||    
T  28379652 ttctgcttctgatgatgtcatcacttcagaagcactccagcttcagacgcactt--tagcttcagacgcagttttcttcagat 28379572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 22774721 - 22774869
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaa--gttgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | ||||||||||||||||  ||   |||||||||||| |||| |||||||||| || ||||||||||||||| |||||  ||||||||| |    
T  22774721 agcttctggtgatgatatagcttctgacaaaatattgcttctgatggacttctgcttctgatgaacttctgcttctgatgatgtcatcgcttcagaggta 22774820  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  | |||||||||||||   | |||||||||| |||||||||||||    
T  22774821 cttgttagttcagaagcactt-ttagcttcagacgctgttttcttcagat 22774869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 22780099 - 22780247
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaa--gttgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | ||||||||||||||||  ||   |||||||||||| |||| |||||||||| || ||||||||||||||| |||||  ||||||||| |    
T  22780099 agcttctggtgatgatatagcttctgacaaaatattgcttctgatggacttctgcttctgatgaacttctgcttctgatgatgtcatcgcttcagaggta 22780198  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  | |||||||||||||   | |||||||||| |||||||||||||    
T  22780199 cttgttagttcagaagcactt-ttagcttcagacgctgttttcttcagat 22780247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 24794052 - 24793992
Alignment:
Q  29 aaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||   || |||||||||||    
T  24794052 aaggacaagcacccaatgcttttcaaatgaaccgttgccaccttttctttagtctttcgct 24793992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 6081625 - 6081668
Alignment:
Q  240 acttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||  | ||||||||||||||||||||||||    
T  6081625 acttcagaagcacttcttagcttcagacgcagttttcttcagat 6081668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 9762586 - 9762551
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  9762586 ttctgcttctgatgacgtcattacttcagaagcact 9762551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 9773122 - 9773087
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  9773122 ttctgcttctgatgacgtcattacttcagaagcact 9773087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 17969229 - 17969170
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  ||| |||||| |||||||| |||||||||||||| |||||    
T  17969229 ttgtactttgtcaactcttcaatgaaggacgagcacccagtgcttttcaaatgaccgttg 17969170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 34790033 - 34789998
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  34790033 ttctgcttctgatgacgtcattacttcagaagcact 34789998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 34804176 - 34804141
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  34804176 ttctgcttctgatgacgtcattacttcagaagcact 34804141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 230
Target Start/End: Original strand, 16777266 - 16777295
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcaga 230  Q
    ||||||||||||||||||||||||||||||    
T  16777266 ttctgcttctgatgacgtcattacttcaga 16777295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 44840625 - 44840731
Alignment:
Q  173 gcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagt 272  Q
    |||||||||||| |||||||||||| |  | |||||||||||||||||| |||||||  |||||    |||||| |||||||| | |||||||  |||||    
T  44840625 gcttctgatgaa-tttgcttctgatgatct-tgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcacttc-agacttcaggagcagt 44840721  T
Q  273 tttcttcaga 282  Q
    ||||||||||    
T  44840722 tttcttcaga 44840731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 19356528 - 19356592
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgctttt-caaatgaacgttggcac 68  Q
    |||||||||| |||||||  ||| | ||||||||||||| ||||||| |||||||||||||||||    
T  19356528 ttgtactttgccaactcttcaatgagggacaagcacccagtgctttttcaaatgaacgttggcac 19356592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 19356660 - 19356712
Alignment:
Q  117 attgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa 169  Q
    ||||||||| |||||| | || |||||||| | ||||||||||||||||||||    
T  19356660 attgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaa 19356712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 22774567 - 22774627
Alignment:
Q  6 ttgtactttgtcaactc-tgaataaaggacaagcacccaatgctt-ttcaaatgaacgttg 64  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||| ||||||||| |||||    
T  22774567 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttcttcaaatgaccgttg 22774627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 22779945 - 22780005
Alignment:
Q  6 ttgtactttgtcaactc-tgaataaaggacaagcacccaatgctt-ttcaaatgaacgttg 64  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||| ||||||||| |||||    
T  22779945 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttcttcaaatgaccgttg 22780005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 31967920 - 31967845
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttca 280  Q
    |||||||||||| ||||| |||||||  |||||    |||||| ||||||||||| ||||||| |||||||||||||    
T  31967920 tgcttctgatgatgtcatcacttcaggagcactttgtcttcaggagcacttcaaa-cttcagaagcagttttcttca 31967845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 34321818 - 34321748
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcag 229  Q
    |||||||||| || ||||||||||||||| |||||| |||| |  || ||||||||||||||||| |||||||    
T  34321818 agcttctgataaacttgcttctgatgaac-ttgcttatgatgatctc-gcttctgatgacgtcatcacttcag 34321748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 5e-71; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 89 - 283
Target Start/End: Complemental strand, 31113886 - 31113691
Alignment:
Q  89 tccaataaacagccattttatacttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatgaacttt 188  Q
    |||||||||||||||||| |   |||||||||||||| |||||| | || |||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  31113886 tccaataaacagccatttgagctttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaagttgcttctgatgaatttt 31113787  T
Q  189 gcttctgataagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
     |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31113786 tcttctgatgagttctgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 31113691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 115 - 283
Target Start/End: Original strand, 21736472 - 21736644
Alignment:
Q  115 agattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgat-aagttctgcttctg 211  Q
    ||||||||||| |||||| | || |||||||| | |||||||||||||||||||| |  |||||||||||||||||||||||||| || |||||||||||    
T  21736472 agattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatgaactttgcttctgatgaacttctgcttctg 21736571  T
Q  212 atgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||||||||| || |||||||||| ||||||| | ||||||||||||||||||||||||    
T  21736572 atgacgtcattacttcagaggcacttgtaacttcagaaacacttcatagcttcagacgcagttttcttcagat 21736644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 2246752 - 2246901
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  ||||||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  2246752 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggacttatgcttctgatgaacttctgcttctgatgacgtcattacttcagaggca 2246851  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  |||| |||| ||||||| | ||||||||||||||||||||||||    
T  2246852 cttgttacttaagaaccacttcatagcttcagacgcagttttcttcagat 2246901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 16077315 - 16077464
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  |||||||||||  ||| |||||||||| || |||||||||||||||| |||||||||||||||||    
T  16077315 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggtcttctgcttctgatgaacttctgcttctgatgacttcattacttcagaggca 16077414  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  ||||||||||||||||  | ||||||||||||||||||||||||    
T  16077415 cttgttacttcagaagcacttcttagcttcagacgcagttttcttcagat 16077464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17022060 - 17022148
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||    
T  17022060 acactttgtactttgtcaactctcaatgaaggacaagcacctaatgcttttcaaacgaacgttggcaccttccctttagtctttcgctt 17022148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 1064524 - 1064673
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  |||||||||||  ||| ||||||||||  | |||||||||| |||||||||||||||||||||||    
T  1064524 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggtcttctgcttctgatggacttctgcttctaatgacgtcattacttcagaggca 1064623  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  ||||||||||||||||  | ||||||||||||||||||||||||    
T  1064624 cttgttacttcagaagcacttcttagcttcagacgcagttttcttcagat 1064673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 8739976 - 8739827
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | ||||| |||||||||||||| |  |||||||||||   || |||||||||| || ||||||||||||||||||||||||||||||||||    
T  8739976 agcttctggtgatgatgtagcttctgatgaaatcttgcttctgatggtattctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggca 8739877  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  ||||||||||||||||  | ||||||||||||||||||||||||    
T  8739876 cttgttacttcagaagcacttctgagcttcagacgcagttttcttcagat 8739827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 9092214 - 9092065
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | ||||| |||||||||||||| |  |||||||||||   || |||||||||| || ||||||||||||||||||||||||||||||||||    
T  9092214 agcttctggtgatgatgtagcttctgatgaaatcttgcttctgatggtattctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggca 9092115  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  ||||||||||||||||  | ||||||||||||||||||||||||    
T  9092114 cttgttacttcagaagcacttctgagcttcagacgcagttttcttcagat 9092065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10529379 - 10529466
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    |||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  10529379 acacttcgtactttgtcaactctcaatgaaggacaagcacccaatgcttttcaaacgaacgttggcactttccttt-agtctttcgctt 10529466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 29906035 - 29905888
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  ||||||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  29906035 agcttctggtgatgatatagcttctgatgaaatattgcttctgatggacttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggca 29905936  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  | |||||| ||||||   | ||||||||||||||||||||||||    
T  29905935 cttgttagttcagaggcactt--tagcttcagacgcagttttcttcagat 29905888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 29947200 - 29947053
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  ||||||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  29947200 agcttctggtgatgatatagcttctgatgaaatattgcttctgatggacttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggca 29947101  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  | |||||| ||||||   | ||||||||||||||||||||||||    
T  29947100 cttgttagttcagaggcactt--tagcttcagacgcagttttcttcagat 29947053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 29996354 - 29996207
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  ||||||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  29996354 agcttctggtgatgatatagcttctgatgaaatattgcttctgatggacttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggca 29996255  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  | |||||| ||||||   | ||||||||||||||||||||||||    
T  29996254 cttgttagttcagaggcactt--tagcttcagacgcagttttcttcagat 29996207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 51989145 - 51989062
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  51989145 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcaccttccttttagtctttcgct 51989062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 17281281 - 17281132
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  |||||||||||  ||| ||||||||||  | || ||||||||||||||||||||||||||| |||    
T  17281281 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggtcttctgcttctgatggacttttgcttctgatgacgtcattacttcagatgca 17281182  T
Q  235 ct-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |  ||||||||||||||||  | ||||||||||||||||||||||||    
T  17281181 cttgttacttcagaagcacttcttagcttcagacgcagttttcttcagat 17281132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 37412813 - 37412937
Alignment:
Q  156 tagcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttc 255  Q
    ||||||||||| || ||||||||||||||||| ||||||||  || | |||||||||||||||||| ||||||||||||||    |||||| ||||||||    
T  37412813 tagcttctgataaacttgcttctgatgaactt-gcttctgacgagctttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttc 37412911  T
Q  256 aaaacttcagacgcagttttcttcaga 282  Q
     |||||||||| |||||||||||||||    
T  37412912 -aaacttcagatgcagttttcttcaga 37412937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 283
Target Start/End: Complemental strand, 16665965 - 16665826
Alignment:
Q  150 atgatatagcttctgatgaagtt---gcttctgatgaa-ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcac-tgaaactt 243  Q
    ||||||||||||||||||| | |   |||||||||||| | |||||||||||    ||||||||||||||||||||||||||||||||||| ||  ||||    
T  16665965 atgatatagcttctgatgatgatatagcttctgatgaaaccttgcttctgatggtcttctgcttctgatgacgtcattacttcagaggcacttgttactt 16665866  T
Q  244 cagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||  | ||||||||||||||||||||||||    
T  16665865 cagaagcacttcttagcttcagacgcagttttcttcagat 16665826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 23680229 - 23680117
Alignment:
Q  173 gcttctgatgaact-ttgcttctgataagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgca 270  Q
    |||||||||||| | ||||||||||| |  | |||||||||||| ||||| ||||||||| |||| |||||||||||||||||||| | |||||||||||    
T  23680229 gcttctgatgaaatcttgcttctgatgaactttgcttctgatgatgtcatcacttcagagacacttgaaacttcagaagcacttcatagcttcagacgca 23680130  T
Q  271 gttttcttcagat 283  Q
    |||||||||||||    
T  23680129 gttttcttcagat 23680117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 24052466 - 24052354
Alignment:
Q  173 gcttctgatgaact-ttgcttctgataagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgca 270  Q
    |||||||||||| | ||||||||||| |  | |||||||||||| ||||| ||||||||| |||| |||||||||||||||||||| | |||||||||||    
T  24052466 gcttctgatgaaatcttgcttctgatgaactttgcttctgatgatgtcatcacttcagagacacttgaaacttcagaagcacttcatagcttcagacgca 24052367  T
Q  271 gttttcttcagat 283  Q
    |||||||||||||    
T  24052366 gttttcttcagat 24052354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 15650871 - 15650788
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | | ||||||||| | ||||||||||||    
T  15650871 ttctgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcactttatagcttcagacgtacttttcttcagat 15650788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 15662536 - 15662423
Alignment:
Q  173 gcttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | |||||||||||  | |||||||||||||||| |||||||||| |||||||| |||||||||||||||||| | | |||||||| |    
T  15662536 gcttctgatgaaatcttgcttctgatggacttctgcttctgatgacatcattacttcggaggcacttgaaacttcagaagcactttatagcttcagacac 15662437  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  15662436 agttttcttcagat 15662423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 283
Target Start/End: Original strand, 27173245 - 27173341
Alignment:
Q  188 tgcttctgataagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||   ||||||||||||||||||||| | ||||||||| || |||||||||||||||||||  | ||||||||||||||||||||||||    
T  27173245 tgcttctgatgtcttctgcttctgatgacgtcatcatttcagaggctcttgaaacttcagaagcacttcttagcttcagacgcagttttcttcagat 27173341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 8758281 - 8758198
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||||| |||||  | ||||||||||||||||||||||||    
T  8758281 ttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagaacttcttagcttcagacgcagttttcttcagat 8758198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 13977956 - 13978035
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| ||||||||||||||    |||||| ||||||||| ||||||||||||||||||||||||||    
T  13977956 tgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttcataacttcagacgcagttttcttcagat 13978035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 15833627 - 15833706
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| ||||||||||||||    |||||| ||||||||| ||||||||||||||||||||||||||    
T  15833627 tgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttcataacttcagacgcagttttcttcagat 15833706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 15851173 - 15851252
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| ||||||||||||||    |||||| ||||||||| ||||||||||||||||||||||||||    
T  15851173 tgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttcataacttcagacgcagttttcttcagat 15851252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 283
Target Start/End: Original strand, 17961710 - 17961876
Alignment:
Q  121 aatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgataagttctgcttctgatgacgt 218  Q
    |||||| |||||  ||| |||||||| | ||||| |||||||||| ||| |  ||||||||||||  | ||||||||||   ||||||||||||||||||    
T  17961710 aatctgttgatcacttgtagcttctggtgatgatctagcttctgacgaaatattgcttctgatgacttctgcttctgatgccttctgcttctgatgacgt 17961809  T
Q  219 cattacttcagaggcac-tgaaacttcagaagcacttc-aaaacttcagacgcagttttcttcagat 283  Q
    ||| | ||||||||||| ||| |||||||||||||| |  || ||||||||| ||||||||||||||    
T  17961810 catcatttcagaggcacttgatacttcagaagcactccttaatcttcagacgtagttttcttcagat 17961876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 13199091 - 13198990
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  ||||||||||| |||| |||||||||| || |||||||||||||||| |||||||||||||||||    
T  13199091 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggacttctgcttctgatgaacttctgcttctgatgacatcattacttcagaggca 13198992  T
Q  235 ct 236  Q
    ||    
T  13198991 ct 13198990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 22151282 - 22151368
Alignment:
Q  4 ctttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgctt 89  Q
    |||||||||||||||||||| | | ||||||||||||||||||||||||||||||| ||||| |||||| | || ||||||||||||    
T  22151282 ctttgtactttgtcaactctcattgaaggacaagcacccaatgcttttcaaatgaaccgttgccacctttcctttagtctttcgctt 22151368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 934049 - 934145
Alignment:
Q  187 ttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  934049 ttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 934145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 283
Target Start/End: Complemental strand, 9006361 - 9006207
Alignment:
Q  135 ttgaagcttctgataatgatatagcttctgatgaagttg--cttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcaga 230  Q
    |||||||||||| | |||||||||||||||||||| |||  |||||||||  ||| |||||||||| |  |||||||| ||||||||||||| |||||||    
T  9006361 ttgaagcttctggtgatgatatagcttctgatgaaattgtgcttctgatggtcttctgcttctgatgatcttctgcttttgatgacgtcatttcttcaga 9006262  T
Q  231 ggcac--tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||  ||  ||||||||||||||||     || ||||||||||||||||||||    
T  9006261 ggcactttgtcacttcagaagcacttcttggttttagacgcagttttcttcagat 9006207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 282
Target Start/End: Original strand, 14581524 - 14581664
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||| | |||||||||||||||||||| |  ||||||||||||  | ||||||||||        |||||||||||||||| ||||||||||||||    
T  14581524 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatgacttctgcttctgatgc------cttctgatgacgtcatcacttcagaggcact 14581617  T
Q  237 -gaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
     |  ||||||||||||||||  | |||||||||||||||||||||||    
T  14581618 tgttacttcagaagcacttcttagcttcagacgcagttttcttcaga 14581664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 19887183 - 19887071
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||||| |||||  || ||||||||||    
T  19887183 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaatcactt-taagcttcagacgc 19887085  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  19887084 agttttcttcagat 19887071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 29933394 - 29933283
Alignment:
Q  173 gcttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | |||||||||||  | ||||||||||||||||||||||||||||||||||| ||  | |||||||||||||   | ||||||||||    
T  29933394 gcttctgatgaaatattgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgttagttcagaagcactt--tagcttcagacgc 29933297  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  29933296 agttttcttcagat 29933283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 29982548 - 29982437
Alignment:
Q  173 gcttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | |||||||||||  | ||||||||||||||||||||||||||||||||||| ||  | |||||||||||||   | ||||||||||    
T  29982548 gcttctgatgaaatattgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgttagttcagaagcactt--tagcttcagacgc 29982451  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  29982450 agttttcttcagat 29982437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13148299 - 13148388
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||||||| | | |||||||||||||||| ||| |||||||||| ||||| |||||| | || ||||||||||||    
T  13148299 acactttgtactttgtcaactctcattgaaggacaagcacccaaagctattcaaatgaatcgttgccacctttcctttagtctttcgctt 13148388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 16391462 - 16391315
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||| | ||||||||||||    ||||||||||||| ||| |||||||||| || ||||||||||||||||||||| |||||||| ||    
T  16391462 agcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagc 16391363  T
Q  234 actgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||  | |||||||||||||    | |||||||| |||||||||||||||    
T  16391362 acttcagcttcagaagcact--ctagcttcagacacagttttcttcagat 16391315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 1054144 - 1054227
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||| ||||||||||||||||||| ||  |||||||||||||||   | |||||||| |||||||||||||||    
T  1054144 ttctgcttctgatgatgtcattacttcagaggcacttgttacttcagaagcacttattagcttcagacacagttttcttcagat 1054227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 9536031 - 9536109
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| |||||||| |||||  | |||||| |||||||| || ||||||||||||||||||||||||    
T  9536031 tgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagcacttc-aagcttcagacgcagttttcttcagat 9536109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 10529567 - 10529646
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| ||||||||||||||    |||||| |||||| || ||||||| ||||||||||||||||||    
T  10529567 tgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcactccataacttcacacgcagttttcttcagat 10529646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 11216550 - 11216439
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataagtt-ctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  ||||||||||||| | || ||||||||||||||||||| |||||||| | |||  | ||||||||||||||   | ||||||||||    
T  11216550 gcttctgatgaaaactttgcttctgatgactttctgcttctgatgacgtcatcacttcagaagaacttcagcttcagaagcactt--tagcttcagacgc 11216453  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  11216452 agttttcttcagat 11216439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 29461011 - 29460931
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  29461011 ttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 29460931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 29471863 - 29471783
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  29471863 ttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 29471783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 16670993 - 16670892
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag--ttgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | ||||||||||||||||||||   ||||||||||||  ||| ||||| |||| || |||||||||||||||||||||||||||||| |||    
T  16670993 agcttctggtgatgatatagcttctgatgaaaccttgcttctgatggtcttctgcttttgatgaacttctgcttctgatgacgtcattacttcagaagca 16670894  T
Q  235 ct 236  Q
    ||    
T  16670893 ct 16670892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 17909831 - 17909719
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||| ||||| || ||||||| |||||    
T  17909831 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcactttagcttcaggagcac-tccaaacttctgacgc 17909733  T
Q  270 agttttcttcagat 283  Q
    ||||||||| ||||    
T  17909732 agttttctttagat 17909719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 23636147 - 23636228
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||  |||||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  23636147 ttctgcttctgatgacgtcatcacttcaggagcacttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 23636228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 27883757 - 27883870
Alignment:
Q  127 ctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcatt 222  Q
    |||||| |||| |||||||| | ||||||| |||||||||||| |  |||||||||||  ||| ||||||||||  | ||||||||||||||||||||||    
T  27883757 ctgatcaattgtagcttctggtgatgatatcgcttctgatgaaatcttgcttctgatggtcttctgcttctgatggacttctgcttctgatgacgtcatt 27883856  T
Q  223 acttcagaggcact 236  Q
    |||||||| |||||    
T  27883857 acttcagaagcact 27883870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15833437 - 15833526
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgctt 89  Q
    |||||||||||||||||||||||   | ||||||||||| ||||||| ||||||||||| ||||| |||||| | || ||||||||||||    
T  15833437 acactttgtactttgtcaactctctttgaaggacaagcatccaatgcctttcaaatgaaccgttgccacctttcctttagtctttcgctt 15833526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15851043 - 15851132
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgctt 89  Q
    |||||||||||||||||||||||   | ||||||||||| ||||||| ||||||||||| ||||| |||||| | || ||||||||||||    
T  15851043 acactttgtactttgtcaactctctttgaaggacaagcatccaatgcctttcaaatgaaccgttgccacctttcctttagtctttcgctt 15851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 236
Target Start/End: Complemental strand, 16348487 - 16348380
Alignment:
Q  134 attgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataagtt-ctgcttctgatgacgtcattacttca 228  Q
    |||| |||||||| | ||||| | ||||||||||||    ||||||||||||| ||| |||||||||| |||| ||||||||||||||||||| ||||||    
T  16348487 attgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgagtttctgcttctgatgacgtcatcacttca 16348388  T
Q  229 gaggcact 236  Q
    ||||||||    
T  16348387 gaggcact 16348380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 253
Target Start/End: Original strand, 18006655 - 18006790
Alignment:
Q  121 aatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgataagttctgcttctgatgacgt 218  Q
    |||||| |||||  ||| |||||||| | ||||| |||||||||| ||| |  ||||||||||||  | |||||| |||   ||||||||||||||||||    
T  18006655 aatctgttgatcacttgtagcttctggtgatgatctagcttctgacgaaatattgcttctgatgacttctgcttcggatgccttctgcttctgatgacgt 18006754  T
Q  219 cattacttcagaggcac-tgaaacttcagaagcact 253  Q
    ||| | ||||||||||| ||| ||||||||||||||    
T  18006755 catcatttcagaggcacttgatacttcagaagcact 18006790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 27173064 - 27173135
Alignment:
Q  5 tttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    |||||||||||||||||||  ||||||| ||||||||||| |||||||||||||| ||||||||||| |||||    
T  27173064 tttgtactttgtcaactcttcaataaag-acaagcacccagtgcttttcaaatgaccgttggcacctcccttt 27173135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 28169504 - 28169581
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||||||||| |||||  | ||||| ||||||||   | ||||||||||||||||||||||||    
T  28169504 tgcttctgatgacgtcattacttcagaagcactccagcttcataagcactt--tagcttcagacgcagttttcttcagat 28169581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 254
Target Start/End: Original strand, 11167871 - 11167980
Alignment:
Q  150 atgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttc 244  Q
    ||||||| ||||||||||||    |||||||||||||  || |||||||||| || ||||||||||||||||||||| |||||||| |||||  | ||||    
T  11167871 atgatatcgcttctgatgaaaaccttgcttctgatgactttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagcacttcagcttc 11167970  T
Q  245 agaagcactt 254  Q
    ||||||||||    
T  11167971 agaagcactt 11167980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 21736343 - 21736406
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    ||||||||||||||||||  ||| | ||||||||||||| ||||||||||||||||||||||||    
T  21736343 ttgtactttgtcaactcttcaatgagggacaagcacccagtgcttttcaaatgaacgttggcac 21736406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 31113988 - 31113905
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||||||  ||| ||||||||||||| | |||||||||||||||| ||| ||| | ||||| |||||||||||    
T  31113988 ttgtactttgtcaactcttcaatgaaggacaagcacctagtgcttttcaaatgaacattgtcacttcccttttagtctttcgct 31113905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 9699985 - 9699908
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    |||||||||||||||||  |||||||| |||||    |||||||||||||||||| ||| |||||||||||||||||||    
T  9699985 tgcttctgatgacgtcaacacttcagaagcactttgtcttcagaagcacttcaaa-ctttagacgcagttttcttcaga 9699908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 48337647 - 48337759
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || || |||||||||||| ||||| ||||| || |||||  | |||||| ||||||||||  ||||||||||    
T  48337647 gcttctgatgaaaaccttgcttctgatgagcttatgcttctgatgatgtcatcacttctgatgcacttcagcttcaggagcacttcaag-cttcagacgc 48337745  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  48337746 agttttcttcagat 48337759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 41045780 - 41045865
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcacctt-cctttgagtctttcgctt 89  Q
    ||||||||||||||||||  ||| |||||||| |||||| ||||||||||  ||||||||||| ||| ||||| ||||||||||||    
T  41045780 ttgtactttgtcaactcttcaatgaaggacaaacacccagtgcttttcaagcgaacgttggcatcttcccttttagtctttcgctt 41045865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 14955650 - 14955720
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcag 229  Q
    |||||||||| || ||||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||||    
T  14955650 agcttctgataaacttgcttctgatgaactt-gcttctgatgacct-tgcttctgatgacgtcattacttcag 14955720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 2246600 - 2246671
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  ||| |||||||| |||| | ||||||||||||||||||||| |||| |||||    
T  2246600 ttgtactttgtcaactcttcaatgaaggacaaacacctagtgcttttcaaatgaacgttggtacctcccttt 2246671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 7794455 - 7794307
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||||| |||| |||||||    ||||||||||||| ||| |||||||||| || |||||| |||||||||||||| |||||||| |     
T  7794455 agcttctggtgatgatattgcttttgatgaaaaccttgcttctgatgagcttctgcttctgatgagcttctgcctctgatgacgtcatcacttcagatgt 7794356  T
Q  234 actgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||  | |||| | |||||||| || ||||||||  ||||||||||||||    
T  7794355 acttcagcttctggagcacttc-aagcttcagacatagttttcttcagat 7794307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 14321479 - 14321399
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||| |||||||||||||||| |||||  | ||||||| ||||||   | |||||||| |||||||||||||||    
T  14321479 ttctgcttctgataacgtcattacttcagaagcactccagcttcagatgcactt--tagcttcagacacagttttcttcagat 14321399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 18851489 - 18851409
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | |||||||||||||  |   ||||||||||||||||||| ||||    
T  18851489 ttctgcttctgatgacgtcatcacttcagaagcacttcagcttcagaagcact--attgcttcagacgcagttttctttagat 18851409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 1783928 - 1783816
Alignment:
Q  129 gatcgattgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcatta 223  Q
    |||| |||| |||||||| | ||||| | ||||||||||||    ||||||||||||| | | |||||||||| || ||||||||||||||||||||| |    
T  1783928 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccatctgcttctgatgagcttctgcttctgatgacgtcatca 1783829  T
Q  224 cttcagaggcact 236  Q
    ||||||| |||||    
T  1783828 cttcagaagcact 1783816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 4457302 - 4457398
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcaga 230  Q
    |||||||| | ||||||| ||||||||||||    |||||||||| || ||| |||||||||| || ||||||||||||||||||||| ||||||||    
T  4457302 agcttctggtgatgatatcgcttctgatgaaaaccttgcttctgacgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttcaga 4457398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 4404670 - 4404761
Alignment:
Q  150 atgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||| ||||||||||||    ||||||||||||| ||| ||||| |||| || ||||||||||||||||||||| |||||||| |||||    
T  4404670 atgatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttttgatgagcttctgcttctgatgacgtcatcacttcagaagcact 4404761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 13199244 - 13199173
Alignment:
Q  6 ttgtactttgtcaactctgaata-aaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  | | |||||||| |||||| |||||||||||||| |||||| |||| |||||    
T  13199244 ttgtactttgtcaactcttcaaagaaggacaaacacccagtgcttttcaaatgaccgttggtacctcccttt 13199173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 13372467 - 13372432
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  13372467 ttctgcttctgatgacgtcattacttcagaagcact 13372432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 13383061 - 13383026
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  13383061 ttctgcttctgatgacgtcattacttcagaagcact 13383026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 13393655 - 13393620
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  13393655 ttctgcttctgatgacgtcattacttcagaagcact 13393620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 14254176 - 14254141
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  14254176 ttctgcttctgatgacgtcattacttcagaagcact 14254141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 16670905 - 16670862
Alignment:
Q  240 acttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||  | ||||||||||||||||||||||||    
T  16670905 acttcagaagcacttcttagcttcagacgcagttttcttcagat 16670862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 39672680 - 39672645
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  39672680 ttctgcttctgatgacgtcattacttcagaagcact 39672645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 6490165 - 6490111
Alignment:
Q  183 aactttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  6490165 aactttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 6490111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 6500819 - 6500765
Alignment:
Q  183 aactttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  6500819 aactttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 6500765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 13558012 - 13558062
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagca 251  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||| ||||    
T  13558012 ttctgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagca 13558062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 40851197 - 40851274
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    |||||||||||||||||| |||||||  |||||    |||||| |||||||| |||||||||  |||||||||||||||    
T  40851197 tgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcacttc-aaacttcaggagcagttttcttcaga 40851274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 10626771 - 10626703
Alignment:
Q  171 ttgcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||  | ||||||||||| |  |||||||||||||||||||||  |||||||||||||    
T  10626771 ttgcttctgatgaaaaccttgcttctgatgatcttctgcttctgatgacgtcatctcttcagaggcact 10626703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 17281435 - 17281375
Alignment:
Q  6 ttgtactttgtcaactctgaata--aaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  |  ||||||||| ||||| |||||||||||||| |||||    
T  17281435 ttgtactttgtcaactctgataacgaaggacaagtacccagtgcttttcaaatgaccgttg 17281375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 23680275 - 23680218
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa 169  Q
    |||||||||||||| |||||| | || ||||| || | ||||||||||||||||||||    
T  23680275 ttcagattgaatcttctgatccactgtagcttttggtgatgatatagcttctgatgaa 23680218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 24052512 - 24052455
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa 169  Q
    |||||||||||||| |||||| | || ||||| || | ||||||||||||||||||||    
T  24052512 ttcagattgaatcttctgatccactgtagcttttggtgatgatatagcttctgatgaa 24052455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 38315153 - 38315186
Alignment:
Q  202 tctgcttctgatgacgtcattacttcagaggcac 235  Q
    |||||||||||||||||||| |||||||||||||    
T  38315153 tctgcttctgatgacgtcatcacttcagaggcac 38315186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 9981702 - 9981654
Alignment:
Q  183 aactttgcttctgataag-ttctgcttctgatgacgtcattacttcaga 230  Q
    ||||||||||||||| |  ||||||||||||||||||||| ||||||||    
T  9981702 aactttgcttctgatgaccttctgcttctgatgacgtcatcacttcaga 9981654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 9993710 - 9993662
Alignment:
Q  183 aactttgcttctgataag-ttctgcttctgatgacgtcattacttcaga 230  Q
    ||||||||||||||| |  ||||||||||||||||||||| ||||||||    
T  9993710 aactttgcttctgatgaccttctgcttctgatgacgtcatcacttcaga 9993662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 118 - 282
Target Start/End: Complemental strand, 18006957 - 18006792
Alignment:
Q  118 ttgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacg 217  Q
    |||||||| |||||| | || |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  18006957 ttgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaagttgcttctgatgaactttgcttctgatgagttttgcttctgatgacg 18006858  T
Q  218 tcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  18006857 tcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcaggcgcagttttcttcaga 18006792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 6 - 283
Target Start/End: Original strand, 19244030 - 19244313
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct---------------- 88  Q
    ||||||||||||||||||  || |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||                    
T  19244030 ttgtactttgtcaactcttcaacaaaggacaagcacccagtgcttttcaaatgaacgttgacaccttcctttgagtctttcgctctcttagacgaggtta 19244129  T
Q  89 ---tccaataa-acagccattttatacttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatgaa 184  Q
        | ||||| |||||||||| | |||||| ||||||||| |||||| | || |||||||| | |||||||||||||||||||||||||||||||||||    
T  19244130 aaaccaaataaaacagccatttgaaacttcaaattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaagttgcttctgatgaa 19244229  T
Q  185 ctttgcttctgataagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||                |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19244230 ctt----------------tgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 19244313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 112 - 283
Target Start/End: Complemental strand, 8997160 - 8996985
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgat-aagttctgctt 208  Q
    ||||||||| |||| |||||| | || |||||||| | |||||||||||||||||||| |  |||||||||||||||||||||||||| || ||||||||    
T  8997160 ttcagattggatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatgaactttgcttctgatgaacttctgctt 8997061  T
Q  209 ctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||||||| | ||||||||||||||||||||||||    
T  8997060 ctgatgacgtcatcacttcagaggcacttgaaactttagaagcacttcatagcttcagacgcagttttcttcagat 8996985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 112 - 283
Target Start/End: Original strand, 23509495 - 23509670
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgat-aagttctgctt 208  Q
    |||||||||||||| |||||| | || |||||||| | |||||||||||||||||||| |  ||||| ||||||||||||||| |||| || ||||||||    
T  23509495 ttcagattgaatcttctgatccactgtagcttctggtgatgatatagcttctgatgaaatcttgcttatgatgaactttgcttttgatgaacttctgctt 23509594  T
Q  209 ctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  23509595 ctgatgacgtcactacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagat 23509670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 16819208 - 16819096
Alignment:
Q  173 gcttctgatgaact-ttgcttctgataagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgca 270  Q
    |||||||||||| | ||||||||||| | |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| | |||||||||||    
T  16819208 gcttctgatgaaatcttgcttctgatgacttctgcttctgatgacgtcatttcttcagaggcacttgaaacttcagaagcacttcatagcttcagacgca 16819109  T
Q  271 gttttcttcagat 283  Q
    |||||||||||||    
T  16819108 gttttcttcagat 16819096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 283
Target Start/End: Original strand, 10300927 - 10301088
Alignment:
Q  127 ctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcatt 222  Q
    |||||| |||| |||||||| | |||||||||||||||||||| |  |||||||||||  ||| |||||||||| || ||||||||||||||||||||||    
T  10300927 ctgatcaattgtagcttctggtgatgatatagcttctgatgaaatcgtgcttctgatggtcttctgcttctgatgaacttctgcttctgatgacgtcatt 10301026  T
Q  223 acttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
     |||||||||||| ||  |||||| |||||||||  ||||||||||||||||||||||||||    
T  10301027 gcttcagaggcacttgttacttcataagcacttcttaacttcagacgcagttttcttcagat 10301088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 11536250 - 11536399
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  |||||||||||  ||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  11536250 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggtcttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggca 11536349  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  ||||||||||||||||  | ||||||||||||||||||||||||    
T  11536350 cttgttacttcagaagcacttcttagcttcagacgcagttttcttcagat 11536399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 39526015 - 39525866
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  |||||||||||  ||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  39526015 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggtcttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggca 39525916  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  ||||||||||||||||  | ||||||||||||||||||||||||    
T  39525915 cttgttacttcagaagcacttcttagcttcagacgcagttttcttcagat 39525866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 11515439 - 11515588
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  |||||||||||  ||| ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  11515439 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggtcttctgcttctgatggacttctgcttctgatgacgtcattacttcagaggca 11515538  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  |||||||||||| |||  | ||||||||||||||||||||||||    
T  11515539 cttgttacttcagaagcatttcttagcttcagacgcagttttcttcagat 11515588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 173 - 280
Target Start/End: Complemental strand, 18774512 - 18774403
Alignment:
Q  173 gcttctgatgaacttt-gcttctgataagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgca 270  Q
    |||||||||||| ||| ||||||||| |  | ||||||||||||||||||||||||||||||||| |||||||||||| ||||||| | |||||||||||    
T  18774512 gcttctgatgaaattttgcttctgatgaactttgcttctgatgacgtcattacttcagaggcactcgaaacttcagaaacacttcatagcttcagacgca 18774413  T
Q  271 gttttcttca 280  Q
    ||||||||||    
T  18774412 gttttcttca 18774403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36210141 - 36210053
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||  |||||||||||||||| || ||||||||||||    
T  36210141 acactttgtactttgtcaactctcaatgaaggacaaacacccaatgcttttcaaacaaacgttggcaccttccctttagtctttcgctt 36210053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 55651747 - 55651860
Alignment:
Q  173 gcttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | |||||||||||  | ||||||||||||||||||| |||||||||||||||| |  ||||||||||||||||| | ||||||||||    
T  55651747 gcttctgatgaaatcttgcttctgatggacttctgcttctgatgacgtcgttacttcagaggcacttgttacttcagaagcacttcatagcttcagacgc 55651846  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  55651847 agttttcttcagat 55651860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 14778471 - 14778388
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  14778471 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttctaatgaacgttggcaccttccttttagtctttcgct 14778388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 49001785 - 49001702
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||| ||||||||||||||||||||||| |  ||||||||||||||||| | ||||||||||||||||||||||||    
T  49001785 ttctgcttctgacgacgtcattacttcagaggcacttgttacttcagaagcacttcatagcttcagacgcagttttcttcagat 49001702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 134 - 283
Target Start/End: Complemental strand, 14835962 - 14835810
Alignment:
Q  134 attgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataagtt-ctgcttctgatgacgtcattacttca 228  Q
    |||| |||||||| | ||||| | ||||||||||||    ||||||||||||| ||| |||||||||| |||| ||||||||||||||||||| ||||||    
T  14835962 attgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgagtttctgcttctgatgacgtcatcacttca 14835863  T
Q  229 gaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||  | || |||||||||||   | ||||||||||||||||||||||||    
T  14835862 gaggcacttcatctgcagaagcactt--tagcttcagacgcagttttcttcagat 14835810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 14710807 - 14710724
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||||||  ||| ||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||||    
T  14710807 ttgtactttgtcaactcttcaatgaaggacaagcacctagtgcttttctaatgaacgttggcaccttccttttagtctttcgct 14710724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 19581682 - 19581794
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| | | |||||||||| || ||||||||||||||||||||| ||||||||||||||  | ||||||||||||||   | |||||||||    
T  19581682 ttgcttctgatgaccatctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagcactt--tagcttcagacg 19581779  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  19581780 cagttttcttcagat 19581794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 282
Target Start/End: Complemental strand, 17700719 - 17700597
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttca 256  Q
    |||||||| |||| ||||||||||||||| |||||||||||||  | |||||||||||||||||| |||| ||| |||||    |||||| ||||||||     
T  17700719 agcttctggtgaacttgcttctgatgaac-ttgcttctgataaact-tgcttctgatgacgtcatcactttagaagcactttgtcttcaggagcacttc- 17700623  T
Q  257 aaacttcagacgcagttttcttcaga 282  Q
    ||||||||||| ||||||||||||||    
T  17700622 aaacttcagacacagttttcttcaga 17700597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 17993822 - 17993737
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcacctt-cctttgagtctttcgctt 89  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||||||||||    
T  17993822 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaagtgaacgttggcaccttcccttttagtctttcgctt 17993737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 4987714 - 4987826
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| |||||||||| || ||||||||||||||||||||| ||||||||||||||  | ||||||||||| ||   |  ||||||||    
T  4987714 ttgcttctgatgaccttctgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagcattt--tagtttcagacg 4987811  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  4987812 cagttttcttcagat 4987826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 5873810 - 5873922
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||  ||| |||||||||| || |||||||||||||||||||||||||||| | |||||  | ||||||||||||||   | |||||||||    
T  5873810 ttgcttctgatggtcttctgcttctgatcagcttctgcttctgatgacgtcattacttcataagcactccagcttcagaagcactt--tagcttcagacg 5873907  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  5873908 cagttttcttcagat 5873922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 47151882 - 47151802
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| ||||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  47151882 ttctgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 47151802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 18007088 - 18007006
Alignment:
Q  6 ttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||||||  |  ||||||||||||||| |||||||||||| ||||||||||||| ||||| |||| ||||||    
T  18007088 ttgtactttgtcaactcttcaacaaggacaagcacccagtgcttttcaaattaacgttggcacctcccttttagtccttcgct 18007006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 15207232 - 15207120
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| ||||||||||  | |||||||||||||||| |||| || |||||||||||  | ||||||||||||||   | |||||||||    
T  15207232 ttgcttctgatgagcttctgcttctgatgggcttctgcttctgatgacatcatcacatcagaggcacttcagcttcagaagcactt--tagcttcagacg 15207135  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  15207134 cagttttcttcagat 15207120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 17198225 - 17198145
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| ||||||||||||||  | ||||||||||||||   | |||||||| |||||||||||||||    
T  17198225 ttctgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagcactt--tagcttcagacacagttttcttcagat 17198145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 283
Target Start/End: Original strand, 24713847 - 24713977
Alignment:
Q  150 atgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggcactgaaacttca 245  Q
    ||||||| |||||||||||| |  |||||||||||  ||| ||||||||||  | |||||||||||||||||||||||||||||| |||||     ||||    
T  24713847 atgatatcgcttctgatgaaatcttgcttctgatggtcttctgcttctgatggacttctgcttctgatgacgtcattacttcagaagcact-----ttca 24713941  T
Q  246 gaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||   | ||||||||||||||||||||||||    
T  24713942 gaagcactt--tagcttcagacgcagttttcttcagat 24713977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 25657561 - 25657672
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | |||||||||||||  ||||||||||||||||||||| ||| |||| |||||  | ||||||||||||||   | ||||||||||    
T  25657561 gcttctgatgaaaaccttgcttctgataaccttctgcttctgatgacgtcatcactccagatgcacttcagcttcagaagcactt--tagcttcagacgc 25657658  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  25657659 agttttcttcagat 25657672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 283
Target Start/End: Complemental strand, 3499571 - 3499448
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttca 256  Q
    |||||||| |||| ||||||||||| ||||| ||||||||| |  | ||||||||||||| |||| |||||||| |||||    ||||||  ||||||||    
T  3499571 agcttctggtgaacttgcttctgataaactt-gcttctgatgaact-tgcttctgatgacatcatcacttcagaagcactttgtcttcaggtgcacttca 3499474  T
Q  257 aaacttcagacgcagttttcttcagat 283  Q
    || ||||||||||||||||||||||||    
T  3499473 aa-cttcagacgcagttttcttcagat 3499448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 8182679 - 8182598
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||  |||||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  8182679 ttctgcttctgatgacgtcatcacttcaggagcacttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 8182598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 18077709 - 18077628
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||  |||||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  18077709 ttctgcttctgatgacgtcatcacttcaggagcacttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 18077628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 16819381 - 16819296
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgc-ttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||| || |||||   ||||||||||    
T  16819381 ttgtactttgtcaactcttcaataaaggacaagcacccagtgctttttcaaatgaacgttggcaactccctttcgatctttcgctt 16819296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33378439 - 33378528
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgctt 89  Q
    |||||||||||||||||||||||   | ||||||||||| ||||||| ||||||||||| ||||| |||||| | || ||||||||||||    
T  33378439 acactttgtactttgtcaactctctttgaaggacaagcatccaatgcctttcaaatgaatcgttgccacctttcctttagtctttcgctt 33378528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 9751426 - 9751348
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| |||||| | |||||    |||||| ||||||||||| ||||||||||||||||||||||||    
T  9751426 tgcttctgatgacgtcatcacttcataagcactttgtcttcaggagcacttcaaa-cttcagacgcagttttcttcagat 9751348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 15475029 - 15474950
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| |||||| | |||||    |||||| ||||||||| ||||||||||| ||||||||||||||    
T  15475029 tgcttctgatgacgtcatcacttcataagcactttgtcttcaggagcacttcataacttcagacgtagttttcttcagat 15474950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 18774684 - 18774613
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||| ||||||||||||  ||| |||||||| |||||| |||||||||||||||||||||||||| |||||    
T  18774684 ttgtattttgtcaactcttcaatgaaggacaaacacccagtgcttttcaaatgaacgttggcacctcccttt 18774613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 40454152 - 40454072
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| ||| |||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  40454152 ttctgcttctgatgacgtcatcactccagatgcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 40454072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 55651576 - 55651635
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||    
T  55651576 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttg 55651635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 27188544 - 27188467
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    |||||||||||||||||  |||||||| |||||    |||||||||||||||||| ||| |||||||||||||||||||    
T  27188544 tgcttctgatgacgtcaacacttcagaagcactttgtcttcagaagcacttcaaa-ctttagacgcagttttcttcaga 27188467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 49001986 - 49001933
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatga 58  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  49001986 ttgtactttgtcaactcttcaatgaaggacaagcacccaatgcttttcaaatga 49001933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 283
Target Start/End: Original strand, 16305547 - 16305642
Alignment:
Q  188 tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||| || |||| ||||||||||||| || |||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  16305547 tgcttctgatgagcttctacttctgatgacgttatcacttcagaagcactccagcttcagaagcactt-ttagcttcagacgcagttttcttcagat 16305642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 40470405 - 40470328
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| ||| |||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  40470405 tgcttctgatgacgtcatcactccagatgcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 40470328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 31266603 - 31266520
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||| |||||||||| ||||||||||||||| |||| |  |||| |||||||||||  | |||||||||||||||| |||||||    
T  31266603 ttctacttctgatgatgtcattacttcagagacacttgttactttagaagcacttcttagcttcagacgcagttttattcagat 31266520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 10696081 - 10696131
Alignment:
Q  187 ttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  10696081 ttgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcact 10696131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 10909850 - 10909900
Alignment:
Q  187 ttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  10909850 ttgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcact 10909900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 16819254 - 16819197
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa 169  Q
    |||||||||||||| |||||| | || |||||||| | ||||||||||||||||||||    
T  16819254 ttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaa 16819197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 283
Target Start/End: Original strand, 16317772 - 16317867
Alignment:
Q  188 tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||| || |||| |||||||||||||||| |||||||| |||||  | ||||||||||||||   | ||||||||||| |||| |||||||    
T  16317772 tgcttctgatgagcttctacttctgatgacgtcatcacttcagaagcactccagcttcagaagcactt-ttagcttcagacgcaatttttttcagat 16317867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 451033 - 451068
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  451033 ttctgcttctgatgacgtcattacttcagaagcact 451068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 461614 - 461649
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  461614 ttctgcttctgatgacgtcattacttcagaagcact 461649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 1672652 - 1672727
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttc 279  Q
    |||||||||||||||||| ||| |||| ||||| | ||||||| |||||||  | |||||| | ||||||||||||    
T  1672652 tgcttctgatgacgtcataactacagaagcactaagacttcaggagcacttttatacttcaaaggcagttttcttc 1672727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 1675127 - 1675202
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttc 279  Q
    |||||||||||||||||| ||| |||| ||||| | ||||||| |||||||  | |||||| | ||||||||||||    
T  1675127 tgcttctgatgacgtcataactacagaagcactaagacttcaggagcacttttatacttcaaaggcagttttcttc 1675202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 14843456 - 14843421
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  14843456 ttctgcttctgatgacgtcattacttcagaagcact 14843421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 17918509 - 17918544
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  17918509 ttctgcttctgatgacgtcattacttcagaagcact 17918544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 19944145 - 19944078
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||| ||| |||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  19944145 ttgcttctgatgaccttctgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 19944078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 30926297 - 30926262
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  30926297 ttctgcttctgatgacgtcattacttcagaagcact 30926262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 30936875 - 30936840
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  30936875 ttctgcttctgatgacgtcattacttcagaagcact 30936840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 18752311 - 18752257
Alignment:
Q  183 aactttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  18752311 aactttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 18752257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 18762921 - 18762867
Alignment:
Q  183 aactttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  18762921 aactttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 18762867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 20648437 - 20648387
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagca 251  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||| ||||    
T  20648437 ttctgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagca 20648387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 8997251 - 8997214
Alignment:
Q  39 acccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  8997251 acccagtgcttttcaaatgaacgttggcactttccttt 8997214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 11536097 - 11536157
Alignment:
Q  6 ttgtactttgtcaactctgaata--aaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  |  ||||||||| ||||| |||||||||||||| |||||    
T  11536097 ttgtactttgtcaactctgataacgaaggacaagtacccagtgcttttcaaatgaccgttg 11536157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 39419621 - 39419544
Alignment:
Q  205 gcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    ||||||||||||||||| |||||||| |||||    ||| || ||||||||| ||| ||||  |||||||||||||||    
T  39419621 gcttctgatgacgtcatcacttcagaagcactttgtctttaggagcacttcataacatcaggagcagttttcttcaga 39419544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 40860907 - 40860983
Alignment:
Q  205 gcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    ||||||||||||||||| |||||||| |||||    |||||| |||||||| | |||||||  |||||||||||||||    
T  40860907 gcttctgatgacgtcatcacttcagaagcactttgtcttcaggagcacttc-acacttcaggagcagttttcttcaga 40860983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 3390895 - 3390955
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcag 229  Q
    ||||||||||||| ||| |||||||||| || ||||||||||||||| ||||| |||||||    
T  3390895 ttgcttctgatgaccttctgcttctgatgagcttctgcttctgatgatgtcatcacttcag 3390955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 11519560 - 11519620
Alignment:
Q  224 cttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||| |  |||||||||||| |||  | ||||||||||||||||||||||||    
T  11519560 cttcagaggcacttgttacttcagaagcatttcttagcttcagacgcagttttcttcagat 11519620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 5e-59; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 19461317 - 19461492
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatgaactttgcttctgataagttct-gctt 208  Q
    ||||||| |||||||| |||||| | || |||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||    
T  19461317 acttcaggttgaatcttctgatcaactgtagcttctggtgatgatatagcttctaatgaagttgcttctgatgaactttgcttctgatgagttttggctt 19461416  T
Q  209 ctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19461417 ctgatgatgtcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 19461492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 19558995 - 19559170
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatgaactttgcttctgataagttct-gctt 208  Q
    ||||||| |||||||| |||||| | || |||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||    
T  19558995 acttcaggttgaatcttctgatcaactgtagcttctggtgatgatatagcttctaatgaagttgcttctgatgaactttgcttctgatgagttttggctt 19559094  T
Q  209 ctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19559095 ctgatgatgtcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 19559170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 112 - 276
Target Start/End: Complemental strand, 22166934 - 22166766
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgat-aagttctgctt 208  Q
    |||||||||||||| |||||| | || | |||||| | |||||||||||||||||||| |  ||||||| |||||||||||||||||| || ||||||||    
T  22166934 ttcagattgaatcttctgatcaactgtaacttctggtgatgatatagcttctgatgaaatcttgcttcttatgaactttgcttctgatgaacttctgctt 22166835  T
Q  209 ctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttc 276  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  22166834 ctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttc 22166766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 139 - 276
Target Start/End: Original strand, 23783711 - 23783852
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcac 235  Q
    |||||||| | |||||||||||||||||||| |  |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  23783711 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatgaactttgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcac 23783810  T
Q  236 -tgaaacttcagaagcacttcaaaacttcagacgcagttttc 276  Q
     |||| ||||| || ||||||| | |||||||||||||||||    
T  23783811 ttgaagcttcataaacacttcatagcttcagacgcagttttc 23783852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 23370945 - 23371093
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcac 235  Q
    |||||||| | |||||||||||||||||||| |  ||||||||||| |||||||||||||| |  ||||||||||||||||||||| ||||||||||||     
T  23370945 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggactttgcttctgatgatcttctgcttctgatgacgtcatcacttcagaggcat 23371044  T
Q  236 t-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | |||||||||||||||||||| | ||||||||| ||||||||||||||    
T  23371045 ttgaaacttcagaagcacttcatagcttcagacgtagttttcttcagat 23371093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 3833139 - 3833271
Alignment:
Q  156 tagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagc 250  Q
    |||||||||||||| |  ||||| ||||| |||| ||||||||||  | |||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  3833139 tagcttctgatgaaatcttgcttttgatggacttctgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgtaacttcagaagc 3833238  T
Q  251 acttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||| | ||||||||||||||||||||||||    
T  3833239 acttcatagcttcagacgcagttttcttcagat 3833271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 276
Target Start/End: Complemental strand, 22135723 - 22135617
Alignment:
Q  173 gcttctgatgaact-ttgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | ||||||||||| || ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||    
T  22135723 gcttctgatgaaatcttgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgc 22135624  T
Q  270 agttttc 276  Q
    |||||||    
T  22135623 agttttc 22135617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 3843938 - 3844051
Alignment:
Q  173 gcttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | |||||||||||  | ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||    
T  3843938 gcttctgatgaaatcttgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcatagcttcagacgc 3844037  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  3844038 agttttcttcagat 3844051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 22211252 - 22211139
Alignment:
Q  173 gcttctgatgaact-ttgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | ||||||||||| || |||| |||||||||||||||| | |||||||||||| |||||||||||||||||||| | ||||||||||    
T  22211252 gcttctgatgaattcttgcttctgatgaacttctacttctgatgacgtcatcatttcagaggcacttgaaacttcagaagcacttcatagcttcagacgc 22211153  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  22211152 agttttcttcagat 22211139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 8032063 - 8032147
Alignment:
Q  5 tttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||    
T  8032063 tttgtactttgtcaactctcaaggaaggacaagcacccaatgcttttcaaacgaacgttggcaccttccctttagtctttcgctt 8032147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 283
Target Start/End: Complemental strand, 20259481 - 20259369
Alignment:
Q  174 cttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgca 270  Q
    ||||||||||| | |||||||||||  | |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| | |||||||||||    
T  20259481 cttctgatgaaatcttgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcatagcttcagacgca 20259382  T
Q  271 gttttcttcagat 283  Q
    |||||||||||||    
T  20259381 gttttcttcagat 20259369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 174 - 283
Target Start/End: Complemental strand, 21046111 - 21045999
Alignment:
Q  174 cttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgca 270  Q
    ||||||||||| | |||||||||||  | |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| | |||||||||||    
T  21046111 cttctgatgaaatcttgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcatagcttcagacgca 21046012  T
Q  271 gttttcttcagat 283  Q
    |||||||||||||    
T  21046011 gttttcttcagat 21045999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 23271240 - 23271156
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  23271240 ttgtactttgtcaactcttcaatgaaggacaagcacccaatgtttttcaaatgaacgttggcaccttccttttagtctttcgctt 23271156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 189 - 283
Target Start/End: Complemental strand, 7018246 - 7018151
Alignment:
Q  189 gcttctgataagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||| ||| |||||||||  |||||| | ||||||||||||||||||||||||    
T  7018246 gcttctgatgacttctgcttctgatgacgtcattacttcagaggcacttgagacttcagaaaaacttcatagcttcagacgcagttttcttcagat 7018151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 23380769 - 23380848
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttc 279  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  23380769 ttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttc 23380848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 129 - 283
Target Start/End: Complemental strand, 18769029 - 18768872
Alignment:
Q  129 gatcgattgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcatta 223  Q
    |||| |||| |||||||| | ||||| | ||||||||||||    ||||||||||||| ||| |||||||||| || ||||||||||||||||||||| |    
T  18769029 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatca 18768930  T
Q  224 cttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  18768929 cttcagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 18768872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 16747434 - 16747546
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataagtt-ctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| |||||||||| |||| ||||||||||||||||||| ||||||||||||||  | ||||||||||||||   | |||||||||    
T  16747434 ttgcttctgatgaccttctgcttctgatgagtttctgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagcactt--tagcttcagacg 16747531  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  16747532 cagttttcttcagat 16747546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 31215413 - 31215561
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||||| ||||||||||||    ||||||||||||| ||| |||||||||| || ||||||||||||||||||||| |||||||| ||    
T  31215413 agcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagc 31215512  T
Q  234 actgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||  | |||||||||||| |  || ||||||||||||||||||||||||    
T  31215513 acttcagcttcagaagcac-tataagcttcagacgcagttttcttcagat 31215561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 283
Target Start/End: Original strand, 28903591 - 28903788
Alignment:
Q  89 tccaataaacagccattttatacttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagtt-gcttctgatgaactt 187  Q
    ||||||||||| | |||| | |||| || ||| |||| |||||  |||| |||||||| | ||  |||||||||||||||| || |||||||||||  ||    
T  28903591 tccaataaacaactatttgaaactttaggttgcatcttctgatgaattgtagcttctggtgattttatagcttctgatgaattttgcttctgatgatttt 28903690  T
Q  188 t--gcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
       ||||||||| | || ||||||||||||| |||| ||||||||||| ||    |||||| ||||||||| ||||||||||||||||||||||||||    
T  28903691 atagcttctgatgaattttgcttctgatgacatcatcacttcagaggcccttggtcttcaggagcacttcataacttcagacgcagttttcttcagat 28903788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40003255 - 40003341
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcg 86  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| ||||| |||||||| || |||||||||    
T  40003255 acactttgtactttgtcaactctcattgaaggacaagcacccaatgcttttcaaatgaaccgttgccaccttccctttagtctttcg 40003341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 3844259 - 3844342
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| | || ||||| |||||||||||||||    
T  3844259 ttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcatagctccagactcagttttcttcagat 3844342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 19461193 - 19461264
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  19461193 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcacctcccttt 19461264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 19558871 - 19558942
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  19558871 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcacctcccttt 19558942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 19418769 - 19418881
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||| || ||||| || ||||||||||    
T  19418769 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagtacttc-aagcttcagacgc 19418867  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  19418868 agttttcttcagat 19418881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 19429346 - 19429458
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||| || ||||| || ||||||||||    
T  19429346 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagtacttc-aagcttcagacgc 19429444  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  19429445 agttttcttcagat 19429458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 22623203 - 22623118
Alignment:
Q  200 gttctgcttctgatgacgtcattacttcagaggcac--tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||||| ||||||||||||  ||  ||||||||||||||||    ||||||||||||||||||||||||    
T  22623203 gttctgcttctgatgacgtcatttcttcagaggcactttgttacttcagaagcacttcttggcttcagacgcagttttcttcagat 22623118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 283
Target Start/End: Complemental strand, 23269753 - 23269644
Alignment:
Q  174 cttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcag 271  Q
    |||||||||| ||| |||||| ||| || ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | ||||||||||||    
T  23269753 cttctgatgaccttctgcttccgatgagcttctgcttctgatgacgtcatcacttcagaagcacttcagcttcagaagcactt--tagcttcagacgcag 23269656  T
Q  272 ttttcttcagat 283  Q
    ||||||||||||    
T  23269655 ttttcttcagat 23269644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 1745382 - 1745460
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| ||||||||||||||    |||||| ||||| || |||||||||||||||||||||||||||    
T  1745382 tgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcac-tccaaacttcagacgcagttttcttcagat 1745460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 20161061 - 20160981
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  20161061 ttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 20160981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 20196406 - 20196486
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  20196406 ttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 20196486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 30314528 - 30314448
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||| ||||||||| |||||||| |||||  | |||||||||||||||  | ||||||||||||||||||||||||    
T  30314528 ttctgcttctgttgacgtcatcacttcagatgcacttcagcttcagaagcacttc--agcttcagacgcagttttcttcagat 30314448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 19225351 - 19225463
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||||| ||| |  || ||||||||||    
T  19225351 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagcacttcagcttcagaaacac-tataagcttcagacgc 19225449  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  19225450 agttttcttcagat 19225463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 21288625 - 21288703
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    |||||||||||||||||| |||||||| |||||    |||||| ||||||||| ||||||||| |||||||||||||||    
T  21288625 tgcttctgatgacgtcatcacttcagaagcactttttcttcaggagcacttcataacttcagaagcagttttcttcaga 21288703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 7018417 - 7018352
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcacct 70  Q
    ||||||||||||||||||  ||| |||||||| |||||| ||||||||||||||||||||||||||    
T  7018417 ttgtactttgtcaactcttcaatgaaggacaaacacccagtgcttttcaaatgaacgttggcacct 7018352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17519183 - 17519094
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgctt 89  Q
    |||||||||||||||| |||||| | | | |||||| || ||||||||||||||||||| ||||| |||||||| || ||||||||||||    
T  17519183 acactttgtactttgttaactctcattgagggacaaacatccaatgcttttcaaatgaaccgttgccaccttccctttagtctttcgctt 17519094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 26734836 - 26734766
Alignment:
Q  211 gatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  26734836 gatgacgtcattacttcagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 26734766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29379604 - 29379693
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||| ||||||||||||||| | | | |||||||| |||||||||||||||||||| ||||| |||||||  || ||||||||||||    
T  29379604 acactttctactttgtcaactctcattgagggacaagcgcccaatgcttttcaaatgaaccgttgccaccttctctttagtctttcgctt 29379693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 283
Target Start/End: Complemental strand, 40213004 - 40212910
Alignment:
Q  189 gcttctgataag-ttctgcttctgatgacgtcatt-acttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||| || |||||||||||||||||||||| |||||||| ||||| || ||||||||||||||   | ||||||||||| ||||||||||||    
T  40213004 gcttctgatgagcttctgcttctgatgacgtcatttacttcagaagcactcaagcttcagaagcactt--tagcttcagacgcaattttcttcagat 40212910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 43774085 - 43774192
Alignment:
Q  173 gcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagt 272  Q
    ||||||||||||||| ||||||||| |  | |||||||||||||||||| |||||||| |||||    ||| || |||||||| |||||||||||||||     
T  43774085 gcttctgatgaactt-gcttctgatgaactttgcttctgatgacgtcatcacttcagaagcactttgtctttaggagcacttc-aaacttcagacgcaga 43774182  T
Q  273 tttcttcaga 282  Q
    ||||||||||    
T  43774183 tttcttcaga 43774192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 43774082 - 43774124
Alignment:
Q  155 atagcttctgatgaagttgcttctgatgaactttgcttctgat 197  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  43774082 atagcttctgatgaacttgcttctgatgaactttgcttctgat 43774124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 3843767 - 3843826
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||| |||||    
T  3843767 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttg 3843826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 18158704 - 18158784
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| ||||||   |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  18158704 ttctgcttctgatgacgtcatcacttcatgagcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 18158784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 22135894 - 22135823
Alignment:
Q  6 ttgtactttgtcaactct-gaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    |||||||||||||||||| |||  | | ||||||||||| |||||||||||||||| ||||||| |||||||    
T  22135894 ttgtactttgtcaactcttgaacgaggtacaagcacccagtgcttttcaaatgaactttggcactttccttt 22135823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 22167059 - 22166988
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  ||| | | ||||||||||| ||||||||||||||||||||| || |||||||    
T  22167059 ttgtactttgtcaactcttcaatgaggtacaagcacccagtgcttttcaaatgaacgttggaactttccttt 22166988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 23370793 - 23370864
Alignment:
Q  6 ttgtactttgtcaactctgaata-aaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  | | ||||||||||||||| |||||||||||||| |||||| |||| |||||    
T  23370793 ttgtactttgtcaactcttcaaagaaggacaagcacccagtgcttttcaaatgaccgttggtacctcccttt 23370864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 13430556 - 13430479
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    ||||||||||||||||||||||||||  |||||    |||||| |||||||| |||||||||  |||||||||||||||    
T  13430556 tgcttctgatgacgtcattacttcaggagcactttgtcttcaggagcacttc-aaacttcaggagcagttttcttcaga 13430479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 22211298 - 22211241
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa 169  Q
    |||||||||||||| |||||| | || |||||||| | ||||||||||||||||||||    
T  22211298 ttcagattgaatcttctgatccactgtagcttctggtgatgatatagcttctgatgaa 22211241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 36105411 - 36105481
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcag 229  Q
    |||||||||| || ||||||||||||||| ||||||||||| |  | |||||||||||||||||| |||||||    
T  36105411 agcttctgataaacttgcttctgatgaac-ttgcttctgatgacct-tgcttctgatgacgtcatcacttcag 36105481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 3221081 - 3221116
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  3221081 ttctgcttctgatgacgtcattacttcagaagcact 3221116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 18154170 - 18154237
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||| ||| ||||| |||| || ||||||||||||||||||||| |||||||| |||||    
T  18154170 ttgcttctgatgaccttctgcttatgatgagcttctgcttctgatgacgtcatcacttcagaagcact 18154237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 20259653 - 20259594
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||| ||||||||  ||| ||||||||||||||| |||||||||||||| |||||    
T  20259653 ttgtactttttcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttg 20259594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 21046283 - 21046224
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||| ||||||||  ||| ||||||||||||||| |||||||||||||| |||||    
T  21046283 ttgtactttttcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttg 21046224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 15336007 - 15335887
Alignment:
Q  158 gcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaa 257  Q
    |||||||||||  ||||||||||||| ||| ||||||||| |  | |||||||||||||||||| | |||||| ||||||   |||||| ||| |||       
T  15336007 gcttctgatgactttgcttctgatgacctt-gcttctgatcacct-tgcttctgatgacgtcatcatttcagaagcactgtgtcttcaggagcgctt--t 15335912  T
Q  258 aacttcagacgcagttttcttcaga 282  Q
    ||||||||  |||||||||||||||    
T  15335911 aacttcaggagcagttttcttcaga 15335887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 15425072 - 15424952
Alignment:
Q  158 gcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaa 257  Q
    |||||||||||  ||||||||||||| ||| ||||||||| |  | |||||||||||||||||| | |||||| ||||||   |||||| ||| |||       
T  15425072 gcttctgatgactttgcttctgatgacctt-gcttctgatcacct-tgcttctgatgacgtcatcatttcagaagcactgtgtcttcaggagcgctt--t 15424977  T
Q  258 aacttcagacgcagttttcttcaga 282  Q
    ||||||||  |||||||||||||||    
T  15424976 aacttcaggagcagttttcttcaga 15424952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 15516376 - 15516256
Alignment:
Q  158 gcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaa 257  Q
    |||||||||||  ||||||||||||| ||| ||||||||| |  | |||||||||||||||||| | |||||| ||||||   |||||| ||| |||       
T  15516376 gcttctgatgactttgcttctgatgacctt-gcttctgatcacct-tgcttctgatgacgtcatcatttcagaagcactgtgtcttcaggagcgctt--t 15516281  T
Q  258 aacttcagacgcagttttcttcaga 282  Q
    ||||||||  |||||||||||||||    
T  15516280 aacttcaggagcagttttcttcaga 15516256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 22135769 - 22135712
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa 169  Q
    |||||||||||||| |||||| | || | |||||| | ||||||||||||||||||||    
T  22135769 ttcagattgaatcttctgatcaactgtaacttctggtgatgatatagcttctgatgaa 22135712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 17797638 - 17797677
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgat 197  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  17797638 agcttctgatgaacttgcttctgatgaa-tttgcttctgat 17797677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 6 - 283
Target Start/End: Original strand, 22078 - 22359
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt--------------- 89  Q
    ||||||||||||||||||  || |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||                    
T  22078 ttgtactttgtcaactcttcaacaaaggacaagcacccagtgcttttcaaatgaacgttgacaccttcctttgagtctttcgctctcttagacgaggtta 22177  T
Q  90 ---ccaataaacagccattttatacttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatgaact 186  Q
       ||||||||||||||||| | |||||| ||||||||| |||||| | || |||||||| | |||||||||||||||||||||||||||||||||||||    
T  22178 aaaccaataaacagccatttgaaacttcaaattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaagttgcttctgatgaact 22277  T
Q  187 ttgcttctgataagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||                ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22278 ttgcttctgat----------------gacgtcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 22359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 112 - 280
Target Start/End: Complemental strand, 36097103 - 36096932
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgataagttctgcttc 209  Q
    |||||||||||||| |||||| | || |||||| | | |||||||||||||||||||| |  |||||||||||||||||||||||||| | |||||||||    
T  36097103 ttcagattgaatcttctgatcaactgtagcttccggtgatgatatagcttctgatgaaatcttgcttctgatgaactttgcttctgatgacttctgcttc 36097004  T
Q  210 tgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttca 280  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  36097003 tgatgacgtcattacttcagaggcactcgaaacttcagaagcacttcatagcttcagacgcagttttcttca 36096932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 112 - 280
Target Start/End: Complemental strand, 36095646 - 36095475
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgataagttctgcttc 209  Q
    |||||||||||||| |||||| | || |||||| | | |||||||||||||||||||| |  |||||||||||||||||||||||||| | |||||||||    
T  36095646 ttcagattgaatcttctgatcaactgtagcttccggtgatgatatagcttctgatgaaatcttgcttctgatgaactttgcttctgatgacttctgcttc 36095547  T
Q  210 tgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttca 280  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| |||||||||||||||    
T  36095546 tgatgacgtcattacttcagaggcactcgaaacttcagaagcacttcatagcttcaaacgcagttttcttca 36095475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 112 - 283
Target Start/End: Original strand, 13523349 - 13523524
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgat-aagttctgctt 208  Q
    |||||||||||||| |||||| | || | |||||| | |||||||||||||||||||| |  | ||||||| |||||||||||||||| || ||||||||    
T  13523349 ttcagattgaatcttctgatcaactgtatcttctggtgatgatatagcttctgatgaaatctttcttctgaagaactttgcttctgatgaacttctgctt 13523448  T
Q  209 ctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||||||||| || |||||||||| ||||||| | ||||||||||||||||||||||||    
T  13523449 ctgatgacgtcattacttcagaggcacttgtaacttcagaaacacttcatagcttcagacgcagttttcttcagat 13523524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 112 - 283
Target Start/End: Original strand, 13534076 - 13534251
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgat-aagttctgctt 208  Q
    |||||||||||||| |||||| | || |||||||| | |||||||||||| ||||||| |  ||||| ||| |||||||||||||||| || ||||||||    
T  13534076 ttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttatgatgaaatcttgcttatgaagaactttgcttctgatgaacttctgctt 13534175  T
Q  209 ctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||||||||| || |||||||||| ||||||| | ||||||||||||||||||||||||    
T  13534176 ctgatgacgtcattacttcagaggcacttgtaacttcagaaacacttcatagcttcagacgcagttttcttcagat 13534251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 32754240 - 32754388
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaa--gttgcttctgatgaactttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcac 235  Q
    |||||||| | |||||| |||||||||||||  ||||||||||||| |||||||||||||| |  |||||||||||||||| |||| |||||||||||||    
T  32754240 agcttctggtgatgatacagcttctgatgaaatgttgcttctgatggactttgcttctgatgatcttctgcttctgatgacatcatcacttcagaggcac 32754339  T
Q  236 t-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  32754340 ttgaaacttcagaagcacttcataacttcagatgcagttttcttcagat 32754388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 20168014 - 20167903
Alignment:
Q  173 gcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcag 271  Q
    ||||||||||||||||||||||||| | |||||||||||||||| |||| ||||||||||||| ||||||||||||| ||||||| ||||||||| ||||    
T  20168014 gcttctgatgaactttgcttctgatgacttctgcttctgatgacatcatcacttcagaggcacttgaaacttcagaaacacttcataacttcagatgcag 20167915  T
Q  272 ttttcttcagat 283  Q
    ||||||||||||    
T  20167914 ttttcttcagat 20167903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 35543044 - 35542930
Alignment:
Q  171 ttgcttctgatgaactttgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||| | |||||||||    
T  35543044 ttgcttctgatgaactttgcttctgatgaacttctgcttctgatgacgtcataacttcagaggcacttgtaacttcagaaacacttcatagcttcagacg 35542945  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  35542944 cagttttcttcagat 35542930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 20624733 - 20624585
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagttg--cttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |||  |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  20624733 agcttctggtgatgatatagcttctgatgaaattgtgcttctgatgaacttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggca 20624634  T
Q  235 ct-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |  ||||||||| |||||  |  ||||||||||||||||||||||||    
T  20624633 cttgttacttcagaaacacttttag-cttcagacgcagttttcttcagat 20624585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20215223 - 20215135
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||| || ||||||||||||    
T  20215223 acactttgtactttgtcaactctcaatgaaggacaagcacccaatgcttttcaaacaaacgttggcaccttccctttagtctttcgctt 20215135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 283
Target Start/End: Original strand, 21414485 - 21414639
Alignment:
Q  134 attgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcag 229  Q
    |||| |||||||| | ||||||||| |||||||||| |  |||||||||||  ||| | ||||||||  | |||||||||||||||||||||||||||||    
T  21414485 attgtagcttctggtgatgatataggttctgatgaaatcttgcttctgatggtcttctacttctgatggacttctgcttctgatgacgtcattacttcag 21414584  T
Q  230 aggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||| ||  ||||||||||||||||  | ||||||||||||||||||||||||    
T  21414585 aggcacatgttacttcagaagcacttcttagcttcagacgcagttttcttcagat 21414639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 24983713 - 24983861
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||||| ||||||||||||    ||||||||||||| ||| |||||||||| || ||||||||||||||||||||| |||||||| ||    
T  24983713 agcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgc 24983812  T
Q  234 actgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||  | |||||| |||||||| || ||||||||||||||||||||||||    
T  24983813 actttagcttcaggagcacttc-aagcttcagacgcagttttcttcagat 24983861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1915447 - 1915535
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||||||| ||  |||||||| |||||||||||||||||| |||||||||||||||||||  || |||||||||    
T  1915447 acactttgtactttgtcaactctcaaagaaggacaaacacccaatgcttttcaaacgaacgttggcaccttccttatagactttcgctt 1915535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 40228693 - 40228776
Alignment:
Q  6 ttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||| |||| ||| |||||||| |||||||||||||||||| ||||||||||||||||| || ||||||||||||    
T  40228693 ttgtactttgtcagctctcaatgaaggacaatcacccaatgcttttcaaacgaacgttggcaccttccctttagtctttcgctt 40228776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 20416852 - 20416739
Alignment:
Q  173 gcttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | |||||||||||  | |||||||||||||||||||||||||||| ||||||| |  ||||||||||||||| | | ||||||||||    
T  20416852 gcttctgatgaaatcttgcttctgatggacttctgcttctgatgacgtcattacttcaaaggcacttgttacttcagaagcactttatagcttcagacgc 20416753  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  20416752 agttttcttcagat 20416739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 283
Target Start/End: Complemental strand, 37406635 - 37406476
Alignment:
Q  127 ctgatcgattgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcat 221  Q
    |||||| |||| |||||||| | ||||| | ||||||||||||    ||||||||||||  ||| |||||||||| || |||||||||||||||||||||    
T  37406635 ctgatcaattgtagcttctggtgatgatgttgcttctgatgaaaaccttgcttctgatggtcttctgcttctgatgagcttctgcttctgatgacgtcat 37406536  T
Q  222 tacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||| |||||  | ||||||||||||||   | ||||||||||||||||||| ||||    
T  37406535 tacttcagaagcactccagcttcagaagcactt--tagcttcagacgcagttttcttgagat 37406476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 40032869 - 40032789
Alignment:
Q  9 tactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||| ||  ||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||    
T  40032869 tactttgtcaactctcaaagaaggacaagcaccaaatgcttttcaaacgaacgttggcaccttccctttagtctttcgctt 40032789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 106037 - 105954
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggca-ctgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||  | ||||||||||||||||||||||||    
T  106037 ttctgcttctgatgacgtcattacttcagaggcatttgttacttcagaagcacttcttagcttcagacgcagttttcttcagat 105954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 13405150 - 13405233
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||    
T  13405150 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttctaatgaacgttggcaccttccttttagtatttcgct 13405233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 20562308 - 20562160
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||||| ||||||||||||    ||||||||||||| ||| |||||||||| || ||||||||||||||||||||| |||||||| ||    
T  20562308 agcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgc 20562209  T
Q  234 actgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||  | |||||| |||||||  || ||||||||| ||||||||||||||    
T  20562208 acttcagcttcaggagcactt-taagcttcagacgtagttttcttcagat 20562160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 23392649 - 23392536
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| ||||| |||| || ||||||||||||||||||||| ||||||||||||||  | ||||||||||||||   | |||||||||    
T  23392649 ttgcttctgatgaccttctgcttttgatgagcttctgcttctgatgacgtcatcacttcagaggcactccagcttcagaagcactt-ttagcttcagacg 23392551  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  23392550 cagttttcttcagat 23392536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 17457604 - 17457752
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||||| ||||||||||||    ||||||||||||| ||| |||||||||| || ||||||||||||||||||||| |||||||| ||    
T  17457604 agcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagc 17457703  T
Q  234 ac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |  | ||||||||||||||   | ||||||||||||||||||||||||    
T  17457704 acttttagcttcagaagcactt--tagcttcagacgcagttttcttcagat 17457752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 283
Target Start/End: Complemental strand, 19477974 - 19477822
Alignment:
Q  134 attgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttca 228  Q
    |||| |||||||| |  |||||| ||||||||||||    ||||||||||||| ||| |||||||||  || ||||||||||||||||||||| ||||||    
T  19477974 attgtagcttctggtgttgatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgacgagcttctgcttctgatgacgtcatcacttca 19477875  T
Q  229 gaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||  | |||||||||||||  | | ||||||| ||||||||||||||||    
T  19477874 gaggcactctagcttcagaagcact--atagcttcagatgcagttttcttcagat 19477822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 36084394 - 36084298
Alignment:
Q  187 ttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  36084394 ttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 36084298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 43622198 - 43622294
Alignment:
Q  187 ttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||| || |||||||||||||||||| || |||||||| ||||| || |||||| |||||||| || ||||||||||||||||||||||||    
T  43622198 ttgcttctgatgagcttctgcttctgatgacgttatcacttcagatgcacttaagcttcaggagcacttc-aagcttcagacgcagttttcttcagat 43622294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 20168187 - 20168115
Alignment:
Q  5 tttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    |||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  20168187 tttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcacctcccttt 20168115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 21660454 - 21660532
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    |||||||||||||||||| |||||||| |||||    |||||| ||||||||| |||||||||||||||||||||||||    
T  21660454 tgcttctgatgacgtcatcacttcagatgcactttgtcttcaggagcacttcataacttcagacgcagttttcttcaga 21660532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 24926451 - 24926563
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||| |||||||| || ||||||||||    
T  24926451 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcactttagcttcaggagcacttc-aagcttcagacgc 24926549  T
Q  270 agttttcttcagat 283  Q
    | ||||||||||||    
T  24926550 aattttcttcagat 24926563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 17446988 - 17447136
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | |||||||  |||||||||||    ||||||||||||| ||| |||||||||| || ||||||||||||||||||||| |||||||| ||    
T  17446988 agcttctggtgatgatatcacttctgatgaaaaccttgcttctgatgaccttctgcttctgatgaacttctgcttctgatgacgtcatcacttcagaagc 17447087  T
Q  234 ac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |  | ||||||||||||||   | ||||||||||||||||||||||||    
T  17447088 acttttagcttcagaagcactt--tagcttcagacgcagttttcttcagat 17447136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 21703458 - 21703535
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| ||||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  21703458 tgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 21703535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 1109488 - 1109568
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  1109488 ttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 1109568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 8521790 - 8521679
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  ||||||||||||| |  ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | |||||||| |    
T  8521790 gcttctgatgaaaactttgcttctgattaccttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt--tagcttcagacac 8521693  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  8521692 agttttcttcagat 8521679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 21706319 - 21706399
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||| |||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  21706319 ttctgcttctgatgacgtcatcactttagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 21706399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 20551733 - 20551652
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | |||||| |||||||  || ||||||||||||||||||||||||    
T  20551733 ttctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagcactt-taagcttcagacgcagttttcttcagat 20551652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 20797613 - 20797532
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||  |||||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  20797613 ttctgcttctgatgacgtcatcacttcaggagcacttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 20797532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 23406364 - 23406283
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||| |||| ||||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  23406364 ttctgcttctgatgacatcatcacttcagaggcactccagcttcagaagcactt-ttagcttcagacgcagttttcttcagat 23406283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 34051877 - 34051796
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  34051877 ttctgcttctgatgacgtcatcacttcagaagcactccagcttcagaagcactt-ttagcttcagacgcagttttcttcagat 34051796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 36228688 - 36228576
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || |||||||||||||| |||||| |||||||| |||||  | ||||||||||||||  || ||||||||||    
T  36228688 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatggcgtcatcacttcagatgcacttcagcttcagaagcactt-taagcttcagacgc 36228590  T
Q  270 agttttcttcagat 283  Q
    |||||||| |||||    
T  36228589 agttttctacagat 36228576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 283
Target Start/End: Complemental strand, 19463944 - 19463792
Alignment:
Q  134 attgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttca 228  Q
    |||| |||||||| |  |||||| ||||||||||||    |||||| |||||| ||| |||||||||  || ||||||||||||||||||||| ||||||    
T  19463944 attgtagcttctggtgttgatatcgcttctgatgaaaaccttgcttttgatgaccttctgcttctgacgagcttctgcttctgatgacgtcatcacttca 19463845  T
Q  229 gaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||| |||  | |||||||||||||  | | ||||||| ||||||||||||||||    
T  19463844 gaggtactctagcttcagaagcact--atagcttcagatgcagttttcttcagat 19463792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 30070198 - 30070345
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | | ||||| ||||||||||||    ||||||||||||| ||| |||||||||| || ||||||||||||||||||||| |||||||| ||    
T  30070198 agcttctggtgaagatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagc 30070297  T
Q  234 actgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||  | |||||| ||||||    | |||||||| |||||||||||||||    
T  30070298 acttcagcttcaggagcact--ctagcttcagacacagttttcttcagat 30070345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 31418629 - 31418482
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||| | ||||||||||||    ||||||||||||| ||| |||||||||| || ||||||||||||||||||||| |||||||| ||    
T  31418629 agcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagc 31418530  T
Q  234 actgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||  | |||||| ||||||    | ||||||||||| ||||||||||||    
T  31418529 acttcagcttcaggagcact--ctagcttcagacgcaattttcttcagat 31418482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 31448520 - 31448373
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||| | ||||||||||||    ||||||||||||| ||| |||||||||| || |||| |||||||||||||||| |||||||| ||    
T  31448520 agcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgagcttctacttctgatgacgtcatcacttcagaagc 31448421  T
Q  234 actgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||  | |||||| ||||||    | ||||||||||||||||||||||||    
T  31448420 acttcagcttcaggagcact--ctagcttcagacgcagttttcttcagat 31448373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 1122246 - 1122326
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | |||||||||| |||||||||||||    
T  1122246 ttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt--tagcttcagacgcggttttcttcagat 1122326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 13533950 - 13534013
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    ||||||||||||||||||  ||| | ||||||||||||| ||||||||||||||||||||||||    
T  13533950 ttgtactttgtcaactcttcaatgagggacaagcacccagtgcttttcaaatgaacgttggcac 13534013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 36095772 - 36095701
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  |||||||||||||||| || ||||||||||| ||||||||||| || |||||    
T  36095772 ttgtactttgtcaactcttcaataaaggacaagcacgcagtgcttttcaaaagaacgttggcaactcccttt 36095701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 36097229 - 36097158
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  |||||||||||||||| || ||||||||||| ||||||||||| || |||||    
T  36097229 ttgtactttgtcaactcttcaataaaggacaagcacgcagtgcttttcaaaagaacgttggcaactcccttt 36097158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 23478575 - 23478684
Alignment:
Q  173 gcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagt 272  Q
    ||||||||||||||| ||||||| | |  | |||||||||| ||||||| ||||||||| ||||    |||||| ||||||||||  ||| |||||||||    
T  23478575 gcttctgatgaactt-gcttctgttgaactttgcttctgataacgtcatcacttcagagacactttgtcttcaggagcacttcaacgcttgagacgcagt 23478673  T
Q  273 tttcttcagat 283  Q
    |||||||||||    
T  23478674 tttcttcagat 23478684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 34062538 - 34062457
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | |||||||||||| |   | ||||||||||||||||||||||||    
T  34062538 ttctgcttctgatgacgtcatcacttcagaagcactccagcttcagaagcacgt-ttagcttcagacgcagttttcttcagat 34062457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 43044014 - 43044095
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| | |||||| |||||  | ||||||||||||||  || ||||||||| ||||||||||||||    
T  43044014 ttctgcttctgatgacgtcatcatttcagaagcacttcagcttcagaagcactt-taagcttcagacgtagttttcttcagat 43044095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 20417023 - 20416964
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||| |||||    
T  20417023 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttg 20416964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 21520037 - 21519925
Alignment:
Q  129 gatcgattgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcatta 223  Q
    |||| |||| |||||||| | ||||| | ||||||||||||    ||||||||||||| | | |||||||||| || ||||||||||||||||||||| |    
T  21520037 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccatctgcttctgatgagcttctgcttctgatgacgtcatca 21519938  T
Q  224 cttcagaggcact 236  Q
    ||||||| |||||    
T  21519937 cttcagaagcact 21519925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 23478574 - 23478616
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgataa 199  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  23478574 agcttctgatgaacttgcttctgttgaactttgcttctgataa 23478616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 35543122 - 35543065
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa 169  Q
    |||||||||||||| |||||| | || |||||||| | ||||||||||||||||||||    
T  35543122 ttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaa 35543065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 13523223 - 13523286
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    ||||||||||||||||||  ||| | |||||| |||||| | ||||||||||||||||||||||    
T  13523223 ttgtactttgtcaactctttaatgagggacaatcacccagtacttttcaaatgaacgttggcac 13523286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 15993672 - 15993707
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  15993672 ttctgcttctgatgacgtcattacttcagaagcact 15993707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 16004234 - 16004269
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  16004234 ttctgcttctgatgacgtcattacttcagaagcact 16004269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23478399 - 23478470
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcacctt 71  Q
    |||||||||||||||||||||||   | |||||||||||  | |||||||||||||||| ||||| ||||||    
T  23478399 acactttgtactttgtcaactctctttgaaggacaagcattccatgcttttcaaatgaatcgttgccacctt 23478470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 27623110 - 27623145
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  27623110 ttctgcttctgatgacgtcattacttcagaagcact 27623145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 32754084 - 32754143
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  ||| |||||| |||| |||||||||||||||||| |||||    
T  32754084 ttgtactttgtcaactcttcaatgaaggacgagcatccaatgcttttcaaatgaccgttg 32754143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 3245344 - 3245267
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    ||||||| |||||||||| |||| ||| |||||    |||||||||||||||||| ||||||  |||||||||||||||    
T  3245344 tgcttctaatgacgtcatcactttagaagcactttgtcttcagaagcacttcaaa-cttcaggagcagttttcttcaga 3245267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 10754430 - 10754376
Alignment:
Q  183 aactttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  10754430 aactttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 10754376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 34771829 - 34771779
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagca 251  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||| ||||    
T  34771829 ttctgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagca 34771779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 34782774 - 34782724
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagca 251  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||| ||||    
T  34782774 ttctgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagca 34782724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 106240 - 106180
Alignment:
Q  6 ttgtactttgtcaactctgaata--aaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  |  ||||||||| ||||| |||||||||||||| |||||    
T  106240 ttgtactttgtcaactctgataacgaaggacaagtacccagtgcttttcaaatgaccgttg 106180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 42394876 - 42394835
Alignment:
Q  240 acttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||   ||||||||||||||||||||||||    
T  42394876 acttcagaagcacttcag--cttcagacgcagttttcttcagat 42394835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 112 - 283
Target Start/End: Complemental strand, 24882376 - 24882201
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa--gttgcttctgatgaactttgcttctgat-aagttctgctt 208  Q
    |||||||||||||| |||||| | || |||||||| | ||||||||||||||||||||   ||||||||||||||||||||||||||| || ||||||||    
T  24882376 ttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatgaactttgcttctgatgaacttctgctt 24882277  T
Q  209 ctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||||| |||||| || |||||||||| ||||||| | ||||||||||||||||||||||||    
T  24882276 ctgatgacgtcattacttcaaaggcacttgtaacttcagaaacacttcatagcttcagacgcagttttcttcagat 24882201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 283
Target Start/End: Complemental strand, 3476299 - 3476121
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctg 205  Q
    ||||||| |||||| | |||||| | || |||||||| | |||||||||||||||||||| |  ||||||||||| |||| || ||||||| || |||||    
T  3476299 acttcagtttgaatatactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatggacttctggttctgatgaacttctg 3476200  T
Q  206 cttctgatgacgtcattacttcagaggcac--tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||||| ||| | |||||||| |||||||||||||||    
T  3476199 cttctgatgacgtcatcacttcagaggcactttgaaacttcagaagcac-tcatagcttcagacacagttttcttcagat 3476121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 18419486 - 18419635
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  |||||||||||  ||| ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  18419486 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggtcttctgcttctgatggacttctgcttctgatgacgtcattacttcagaggca 18419585  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  ||||||||||||||||  | ||||||||||||||||||||||||    
T  18419586 cttgttacttcagaagcacttcttagcttcagacgcagttttcttcagat 18419635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 6044121 - 6044008
Alignment:
Q  173 gcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||  | ||||||||||    
T  6044121 gcttctgatgaaattgtgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcttagcttcagacgc 6044022  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  6044021 agttttcttcagat 6044008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 8933910 - 8934023
Alignment:
Q  173 gcttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | |||||||||||  | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||||||| ||    
T  8933910 gcttctgatgaaatcttgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgagacttcagaagcacttcatagcttcagatgc 8934009  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  8934010 agttttcttcagat 8934023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 13682710 - 13682823
Alignment:
Q  173 gcttctgatgaacttt-gcttctgat-aagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| ||| ||||||||| || |||||||||| |||||||||| |||||||||||||| |||||||||||| ||||||| | ||||||||||    
T  13682710 gcttctgatgaaattttgcttctgatgaacttctgcttctaatgacgtcatcacttcagaggcacttgaaacttcagaaccacttcatagcttcagacgc 13682809  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  13682810 agttttcttcagat 13682823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 15216706 - 15216819
Alignment:
Q  173 gcttctgatgaacttt-gcttctgata-agttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| ||| |||||||||  | |||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||    
T  15216706 gcttctgatgaaatttcgcttctgatggacttctgcttctaatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgc 15216805  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  15216806 agttttcttcagat 15216819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 26209459 - 26209346
Alignment:
Q  173 gcttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | |||||||||||  | |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| | ||||||||||    
T  26209459 gcttctgatgaaatcttgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcatagcttcagacgc 26209360  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  26209359 agttttcttcagat 26209346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13174690 - 13174606
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttc 85  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||| || ||||||||    
T  13174690 acactttgtactttgtcaactctcaatgaaggagaagcacccaatgcttttcaaacgaacgttggcaccttccctttagtctttc 13174606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 283
Target Start/End: Complemental strand, 48805828 - 48805702
Alignment:
Q  155 atagcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcactt 254  Q
    ||||||||||||||| || |||||||||||||| ||||||||| |  | |||||||||||||||||| |||||||| |||||    |||||| |||||||    
T  48805828 atagcttctgatgaactttcttctgatgaactt-gcttctgatgaactttgcttctgatgacgtcatcacttcagaagcactttgtcttcaggagcactt 48805730  T
Q  255 caaaacttcagacgcagttttcttcagat 283  Q
    |||| ||||||||||||||||||||||||    
T  48805729 caaa-cttcagacgcagttttcttcagat 48805702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 589584 - 589732
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaacttt-gcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||||| ||||||||||||    ||||||||||||| |||| ||||||||| || ||||||||||||||||||||| |||||||| ||    
T  589584 agcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgaccttttgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagc 589683  T
Q  234 actgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  589684 acttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 589732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 38593644 - 38593533
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || |||||||||||||||||||||||||||||| ||||| |||||||||||||||||   | ||||||||||    
T  38593644 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcattacttcagaagcactcaaacttcagaagcactt--tagcttcagacgc 38593547  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  38593546 agttttcttcagat 38593533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 18441567 - 18441716
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  |||||||||||  ||| ||||||||||  | || ||||||||||||||||||||||||||| |||    
T  18441567 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggtcttctgcttctgatggacttttgcttctgatgacgtcattacttcagatgca 18441666  T
Q  235 ct-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |  ||||||||||||||||  | ||||||||||||||||||||||||    
T  18441667 cttgttacttcagaagcacttcttagcttcagacgcagttttcttcagat 18441716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 8999015 - 8998935
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttc 85  Q
    ||||||||||||||||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8999015 ttgtactttgtcaactcttcaatgaaagacaagcacccaatgcttttcaaatgaacgttggcaccttccttttagtctttc 8998935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 11087125 - 11087045
Alignment:
Q  6 ttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcg 86  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  11087125 ttgtactttgtcaactttcaatgaaggacaagcacccaatgcttttcaaacgaacgttggtaccttccttttagtctttcg 11087045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 12734077 - 12733964
Alignment:
Q  173 gcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||| |||| ||||||||||  | |||||||||||||||||||||||||||| ||||||| |  ||||||||||||||||| | ||||||||||    
T  12734077 gcttctgatggacttctgcttctgatggacttctgcttctgatgacgtcattacttcaaaggcacttgttacttcagaagcacttcatagcttcagacgc 12733978  T
Q  270 agttttcttcagat 283  Q
    ||||||||| ||||    
T  12733977 agttttctttagat 12733964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 29590382 - 29590495
Alignment:
Q  173 gcttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | |||||||||||  | ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| | ||||| | ||    
T  29590382 gcttctgatgaaatcttgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcatagcttcatatgc 29590481  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  29590482 agttttcttcagat 29590495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 134 - 283
Target Start/End: Original strand, 48382512 - 48382665
Alignment:
Q  134 attgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcag 229  Q
    |||| |||||||| | |||||||||||||||||||| |  ||||||||| | |||| |||||||||| || || ||||||||||||||||||||||||||    
T  48382512 attgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgacggacttctgcttctgatgaacttttgcttctgatgacgtcattacttcag 48382611  T
Q  230 aggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||| ||  ||||||||||||| ||  | |||||||| || ||||||||||||    
T  48382612 aggcacttgttacttcagaagcac-tcctagcttcagacacaattttcttcagat 48382665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 1368020 - 1368132
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||| |||||||| || ||||||||||    
T  1368020 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagcacttc-aagcttcagacgc 1368118  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  1368119 agttttcttcagat 1368132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 21769852 - 21769740
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||| |||||||| || ||||||||||    
T  21769852 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagcacttc-aagcttcagacgc 21769754  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  21769753 agttttcttcagat 21769740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 282
Target Start/End: Complemental strand, 4429025 - 4428902
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttca 256  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |  | |||||||||||| ||||| |||||||| ||| |    ||||| | |||||||     
T  4429025 agcttctgatgaatttgcttctgatgaac-ttgcttctgatgaactttgcttctgatgatgtcatcacttcagaagcattttgtcttcaaaggcacttc- 4428928  T
Q  257 aaacttcagacgcagttttcttcaga 282  Q
    ||||||||||||||||||||||||||    
T  4428927 aaacttcagacgcagttttcttcaga 4428902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 283
Target Start/End: Complemental strand, 25201475 - 25201381
Alignment:
Q  188 tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||| || |||||||||||||||||||||||||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  25201475 tgcttctgatgagcttctgcttctgatgacgtcattacttcagaagcactccagcttcagaagcactt--tagcttcagacgcagttttcttcagat 25201381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 9160118 - 9160232
Alignment:
Q  171 ttgcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagac 267  Q
    ||||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||| |||||||  || ||||||||    
T  9160118 ttgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagcactt-taagcttcagac 9160216  T
Q  268 gcagttttcttcagat 283  Q
    ||||||||||||||||    
T  9160217 gcagttttcttcagat 9160232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 9170573 - 9170687
Alignment:
Q  171 ttgcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagac 267  Q
    ||||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||| |||||||  || ||||||||    
T  9170573 ttgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagcactt-taagcttcagac 9170671  T
Q  268 gcagttttcttcagat 283  Q
    ||||||||||||||||    
T  9170672 gcagttttcttcagat 9170687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 9171374 - 9171488
Alignment:
Q  171 ttgcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagac 267  Q
    ||||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||| |||||||  || ||||||||    
T  9171374 ttgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagcactt-taagcttcagac 9171472  T
Q  268 gcagttttcttcagat 283  Q
    ||||||||||||||||    
T  9171473 gcagttttcttcagat 9171488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 19193290 - 19193401
Alignment:
Q  173 gcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| || |||||||||| || |||||||||||||||||||||||||||||| |||| ||  |||||| ||||||||   | ||||||||||    
T  19193290 gcttctgatgaaattctgcttctgatgaacttctgcttctgatgacgtcattacttcagaagcacttgttacttcataagcactt--tagcttcagacgc 19193387  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  19193388 agttttcttcagat 19193401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 29590211 - 29590282
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||| |||| |||||    
T  29590211 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggtacctcccttt 29590282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 44280918 - 44280998
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  44280918 ttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 44280998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 282
Target Start/End: Complemental strand, 4411909 - 4411786
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttca 256  Q
    ||||||||||||| |||||||| |||||| |||||||||||||  | |||| || |||| ||||| |||||||| |||||    ||| ||| |||||||     
T  4411909 agcttctgatgaatttgcttctaatgaac-ttgcttctgataaactttgctcctaatgatgtcatcacttcagaagcactttgtctttagaggcacttc- 4411812  T
Q  257 aaacttcagacgcagttttcttcaga 282  Q
    |||||| |||||||||||||||||||    
T  4411811 aaactttagacgcagttttcttcaga 4411786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 24794664 - 24794588
Alignment:
Q  205 gcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    ||||||||||||||||| |||||||| |||||    ||||||||||||||| |||||||||||||| |||||||||||    
T  24794664 gcttctgatgacgtcatcacttcagaagcactttttcttcagaagcacttc-aaacttcagacgcatttttcttcaga 24794588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 15888257 - 15888135
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||| | ||||||||||||    ||||||||||||| ||| |||||||||| || |||||||||||||||||||||  ||||||| ||    
T  15888257 agcttctggtgatgatttcgcttctgatgaaaactttgcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatcccttcagaagc 15888158  T
Q  234 actgaaacttcagaagcacttca 256  Q
    |||  | ||||||||||||||||    
T  15888157 acttcagcttcagaagcacttca 15888135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 3166156 - 3166236
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||| | |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  3166156 ttctgcttctgatgacgtcatcacttcaaatgcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 3166236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 3476422 - 3476351
Alignment:
Q  6 ttgtactttgtcaactctgaata-aaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  | | ||||||||||||||| ||||||||||||||||||||| |||| |||||    
T  3476422 ttgtactttgtcaactcttcagagaaggacaagcacccagtgcttttcaaatgaacgttggtacctcccttt 3476351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 24882502 - 24882439
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    ||||||||||||||||||  ||| | ||||||||||||| ||||||||||||||||||||||||    
T  24882502 ttgtactttgtcaactctttaatgagggacaagcacccattgcttttcaaatgaacgttggcac 24882439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 13682539 - 13682610
Alignment:
Q  6 ttgtactttgtcaactctgaata-aaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  | | ||||||||||||||| || |||||||||||||||||| |||| |||||    
T  13682539 ttgtactttgtcaactcttcagagaaggacaagcacccagtgattttcaaatgaacgttggtacctcccttt 13682610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 26209630 - 26209571
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||| |||||    
T  26209630 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttg 26209571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 31116389 - 31116308
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||| | ||| |  | ||||||| |||||| ||  ||||||||||||||||||||||||    
T  31116389 ttctgcttctgatgacgtcatcacttcaaaagcatttcagcttcagacgcactttaag-cttcagacgcagttttcttcagat 31116308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 8933738 - 8933798
Alignment:
Q  6 ttgtactttgtcaactctgaataa--aggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  ||  |||||||||||||| |||||||||||||| |||||    
T  8933738 ttgtactttgtcaactctgataaagaaggacaagcacccagtgcttttcaaatgaccgttg 8933798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 48382364 - 48382424
Alignment:
Q  6 ttgtactttgtcaactctgaataa--aggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  ||  |||||||||||||| |||||||||||||| |||||    
T  48382364 ttgtactttgtcaactctgataaagaaggacaagcacccagtgcttttcaaatgaccgttg 48382424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 454677 - 454642
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  454677 ttctgcttctgatgacgtcattacttcagaagcact 454642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 467459 - 467424
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  467459 ttctgcttctgatgacgtcattacttcagaagcact 467424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 9444248 - 9444317
Alignment:
Q  171 ttgcttctgatgaa---ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||   ||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  9444248 ttgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 9444317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 11096477 - 11096512
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  11096477 ttctgcttctgatgacgtcattacttcagaagcact 11096512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 12734248 - 12734189
Alignment:
Q  6 ttgtactttgtcaactctgaata-aaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  | | ||||||||||||||| |||||||||||||| |||||    
T  12734248 ttgtactttgtcaactcttcagagaaggacaagcacccagtgcttttcaaatgaccgttg 12734189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 20990041 - 20990110
Alignment:
Q  171 ttgcttctgatgaa---ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||   ||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  20990041 ttgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 20990110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 21002920 - 21002851
Alignment:
Q  171 ttgcttctgatgaa---ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||   ||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  21002920 ttgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 21002851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 23264503 - 23264434
Alignment:
Q  171 ttgcttctgatgaa---ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||   ||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  23264503 ttgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 23264434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 14745547 - 14745497
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagca 251  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||| ||||    
T  14745547 ttctgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagca 14745497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 19339182 - 19339105
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    ||||||||| |||||||| |||||||| |||||    |||||| ||||||||||| ||||||  |||||||||||||||    
T  19339182 tgcttctgaggacgtcatcacttcagaagcactttgtcttcaggagcacttcaaa-cttcaggagcagttttcttcaga 19339105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 40054662 - 40054551
Alignment:
Q  173 gcttctgatgaa-ctttgcttctgataag-ttctgcttctgatgacgtcatt-acttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | |||||||||||  | |||||||| ||||||||||||| |||| ||| |||||  | |||||||||||||| |   ||||||||||    
T  40054662 gcttctgatgaaaccttgcttctgatgggcttctgcttatgatgacgtcatttactttagaagcactccagcttcagaagcactttag--cttcagacgc 40054565  T
Q  270 agttttcttcagat 283  Q
    | ||||||||||||    
T  40054564 aattttcttcagat 40054551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 5826199 - 5826274
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttca 280  Q
    ||||||||||||| ||||||||||||  |||||    |||||| |||||||| |||||||||  |||||||||||||    
T  5826199 tgcttctgatgacttcattacttcaggagcactttgtcttcaggagcacttc-aaacttcaggagcagttttcttca 5826274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 9433669 - 9433721
Alignment:
Q  185 ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  9433669 ctttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 9433721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 80)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 112 - 283
Target Start/End: Complemental strand, 12953017 - 12952842
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgat-aagttctgctt 208  Q
    |||||||||||||| |||||| | || |||||||| | |||||||||||||||||||| |  |||||||||||||||||||||||||| || ||||||||    
T  12953017 ttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatgaactttgcttctgatgaacttctgctt 12952918  T
Q  209 ctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||| || || |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  12952917 ctgatgatgtaatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagat 12952842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 114 - 283
Target Start/End: Original strand, 31931734 - 31931907
Alignment:
Q  114 cagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgat-aagttctgcttct 210  Q
    |||||||||||| |||||| | || |||||||| | |||||||||||||||||||| |  ||||||||||||| |||||||||||| || ||||||||||    
T  31931734 cagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatgaattttgcttctgatgaacttctgcttct 31931833  T
Q  211 gatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||||||| || ||||||  || ||||||| | ||||||||||||||||||||||||    
T  31931834 gatgacgtcattacttcagaggcacttgtaacttcgaaaacacttcatagcttcagacgcagttttcttcagat 31931907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 11235835 - 11235982
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagtt-gcttctgatgaactttgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcac- 235  Q
    |||||||| | |||||||||||| ||||||| || |||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||     
T  11235835 agcttctggtgatgatatagcttttgatgaaatttgcttctgatgaactttgcttatgatgaacttctgcttctgatgacgtcattacttcagaggcact 11235934  T
Q  236 tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |||||||||| ||||||| | |||||||| |||||||||||||||    
T  11235935 tgtaacttcagaaacacttcatagcttcagacacagttttcttcagat 11235982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 281
Target Start/End: Original strand, 11206255 - 11206427
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagtt-gcttctgatgaactttgcttctgat-aagttctgcttc 209  Q
    ||||||||||||||  ||||| | || |||||||| | ||||||||| |||||||||| || |||  || ||||||||||||||||| || |||||||||    
T  11206255 ttcagattgaatcttttgatcaactgtagcttctggtgatgatatagtttctgatgaaatttgctgttgctgaactttgcttctgatgaacttctgcttc 11206354  T
Q  210 tgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcag 281  Q
    |||| ||||||||||||||||||||| |||||||||| || ||||||| | ||||||||| ||||||||||||    
T  11206355 tgataacgtcattacttcagaggcacttgaaacttcataatcacttcatagcttcagacgtagttttcttcag 11206427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 18498975 - 18499088
Alignment:
Q  173 gcttctgatgaacttt-gcttctgat-aagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| ||| ||||||||| || |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| | ||||||||||    
T  18498975 gcttctgatgaaattttgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgtaacttcagaagcacttcatagcttcagacgc 18499074  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  18499075 agttttcttcagat 18499088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 18555625 - 18555738
Alignment:
Q  173 gcttctgatgaacttt-gcttctgat-aagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| ||| ||||||||| || ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||    
T  18555625 gcttctgatgaaattttgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgc 18555724  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  18555725 agttttcttcagat 18555738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 18826098 - 18825949
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag--ttgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | ||||||||||||||||||||   ||||||||||||  ||| |||||||||| || |||||||||||||||||||| |||||||||||||    
T  18826098 agcttctggtgatgatatagcttctgatgaaaccttgcttctgatggtcttctgcttctgatgaacttctgcttctgatgacgtcactacttcagaggca 18825999  T
Q  235 ctgaa-acttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||    ||||||||||||||||  | ||||||||||||||||||||||||    
T  18825998 ctttttacttcagaagcacttcttagcttcagacgcagttttcttcagat 18825949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 25519024 - 25519173
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  |||||||||||  ||| ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  25519024 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggtcttctgcttctgatggacttctgcttctgatgacgtcattacttcagaggca 25519123  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  |||||| |||||||||  | ||||||||||||||||||||||||    
T  25519124 cttgttacttcataagcacttcttagcttcagacgcagttttcttcagat 25519173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 7586269 - 7586186
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  7586269 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcaccttccttttagtctttcgct 7586186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 30401439 - 30401327
Alignment:
Q  173 gcttctgatgaacttt-gcttctgata-agttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| ||| |||||||||  | ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| | ||||||||||    
T  30401439 gcttctgatgaaatttcgcttctgatggacttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcac-tcatagcttcagacgc 30401341  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  30401340 agttttcttcagat 30401327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 129 - 283
Target Start/End: Complemental strand, 18925631 - 18925473
Alignment:
Q  129 gatcgattgaagcttctgataatgatatagcttctgatgaag----ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcatt 222  Q
    |||| |||| |||||||| | ||||| | ||||||||||||     ||||||||||||| ||| |||||||||| || |||||||||||||||||||||     
T  18925631 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaactttgcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatc 18925532  T
Q  223 acttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  18925531 acttcagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 18925473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 9933560 - 9933430
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctg 205  Q
    ||||||| || ||| | |||||| |||| |||||||| | |||||||||||||||||||| |  ||||||||||| |||| |||||||||| || |||||    
T  9933560 acttcagtttaaatttactgatcaattgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatggacttctgcttctgatgaacttctg 9933461  T
Q  206 cttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||||||||||||| |||||    
T  9933460 cttctgatgacgtcattacttcagaagcact 9933430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 11525706 - 11525647
Alignment:
Q  29 aaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11525706 aaggacaagcacccagtgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 11525647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 20635932 - 20636041
Alignment:
Q  173 gcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagt 272  Q
    ||||||||||||||| ||||||||| |  | |||||||||||||||||| ||||||||||||||    |||||| ||||||||| |||||||||||||||    
T  20635932 gcttctgatgaactt-gcttctgatgaactttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttcataacttcagacgcagt 20636030  T
Q  273 tttcttcagat 283  Q
    | |||||||||    
T  20636031 tctcttcagat 20636041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 283
Target Start/End: Complemental strand, 17741592 - 17741413
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctg 205  Q
    ||||||| || ||| | |||||| | || |||||||| | |||||||||||||||||||| |  ||||||||||| | || | ||||||||  | |||||    
T  17741592 acttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatggaattctacttctgatggacttctg 17741493  T
Q  206 cttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcag-ttttcttcagat 283  Q
    ||||||||||||||||||||||| |||||| ||  ||||||||||||||||| | ||||||||| || ||||||||||||    
T  17741492 cttctgatgacgtcattacttcaaaggcacttgttacttcagaagcacttcatagcttcagacgtagtttttcttcagat 17741413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 17608233 - 17608154
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| ||||||||||||||    |||||| ||||||||||||||||||||| ||||||||||||||    
T  17608233 tgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttcaaaacttcagacgtagttttcttcagat 17608154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 21128435 - 21128545
Alignment:
Q  173 gcttctgatgaactttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcag 271  Q
    ||||||||||||||  ||||||||| || || |||||||||||||||||| ||||||||| ||||  | |||||| ||||||| |||||||||||| |||    
T  21128435 gcttctgatgaactc-gcttctgatgagcttttgcttctgatgacgtcatcacttcagagacactttatcttcaggagcacttaaaaacttcagacacag 21128533  T
Q  272 ttttcttcagat 283  Q
    ||||||||||||    
T  21128534 ttttcttcagat 21128545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 20029744 - 20029632
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||| |||||||| || ||||||||||    
T  20029744 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagcacttc-aagcttcagacgc 20029646  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  20029645 agttttcttcagat 20029632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 20062495 - 20062383
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||| |||||||| || ||||||||||    
T  20062495 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagcacttc-aagcttcagacgc 20062397  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  20062396 agttttcttcagat 20062383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 25675499 - 25675647
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaa--gttgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||| | |||||||||||  ||||||||||||  |||| |||||||||| || ||||||||||||||||||||| ||||||||||||    
T  25675499 agcttctggtgatgatagatcttctgatgaaatgttgcttctgatagacttctgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggca 25675598  T
Q  235 ct-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |  | |||||||||||||  |  ||||||||||||||||||||||||    
T  25675599 cttgttagttcagaagcacttttag-cttcagacgcagttttcttcagat 25675647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 25679575 - 25679723
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaa--gttgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||| | |||||||||||  ||||||||||||  |||| |||||||||| || ||||||||||||||||||||| ||||||||||||    
T  25679575 agcttctggtgatgatagatcttctgatgaaatgttgcttctgatagacttctgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggca 25679674  T
Q  235 ct-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |  | |||||||||||||  |  ||||||||||||||||||||||||    
T  25679675 cttgttagttcagaagcacttttag-cttcagacgcagttttcttcagat 25679723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 29765871 - 29766019
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag--ttgcttctgatgaactt-tgcttctgataag--ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||| ||||||||||||||||   ||||||||||||  ||| |||||||||| |   |||||||||||||||||||||  ||||||||||    
T  29765871 agcttctggtgatggtatagcttctgatgaaaccttgcttctgatggtcttctgcttctgatgaactttctgcttctgatgacgtcat--cttcagaggc 29765968  T
Q  234 act-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||| |  ||||||||||||||||  | ||||||||||||||||||||||||    
T  29765969 acttgttacttcagaagcacttcttagcttcagacgcagttttcttcagat 29766019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 275
Target Start/End: Complemental strand, 19289221 - 19289117
Alignment:
Q  173 gcttctgatgaacttt-gcttctgataagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgca 270  Q
    |||||||||||| ||| ||||||||| |  | |||||||||||||||||||||||||||||||| |||||||||||||  |||||| | |||||| ||||    
T  19289221 gcttctgatgaaattttgcttctgatgaactttgcttctgatgacgtcattacttcagaggcacttgaaacttcagaaatacttcatagcttcagtcgca 19289122  T
Q  271 gtttt 275  Q
    |||||    
T  19289121 gtttt 19289117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 19289267 - 19289180
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa--gttgcttctgatgaactttgcttctgat 197  Q
    |||||||||||||| |||||| | || |||||||| | ||||||||||||||||||||   |||||||||||||||||||||||||||    
T  19289267 ttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaattttgcttctgatgaactttgcttctgat 19289180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 21128264 - 21128348
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||| |||||| | || ||||||||||||    
T  21128264 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttgccacctttcctttagtctttcgctt 21128348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 283
Target Start/End: Complemental strand, 30120070 - 30119975
Alignment:
Q  188 tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||| || ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  30120070 tgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 30119975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 19289393 - 19289322
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  19289393 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcacctcccttt 19289322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 283
Target Start/End: Original strand, 22309138 - 22309276
Alignment:
Q  150 atgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggcac-tgaaacttc 244  Q
    |||||||| ||||||||||| |  |||||||||||  ||| ||||||||||  | |||| |||||||||||||||||||| ||||||||| ||  |||||    
T  22309138 atgatataacttctgatgaaatcttgcttctgatggtcttctgcttctgatggacttcttcttctgatgacgtcattactccagaggcacttgttacttc 22309237  T
Q  245 agaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||| |||||  | ||||||||||||||||||||||||    
T  22309238 agaagtacttcttagcttcagacgcagttttcttcagat 22309276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 32761791 - 32761643
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaacttt-gcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||||| ||||||||||||    ||||||||||||| |||| ||||||||  || ||||||||||||||| ||||| |||||| | ||    
T  32761791 agcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgaccttttgcttctgacgagcttctgcttctgatgatgtcatcacttcaaatgc 32761692  T
Q  234 actgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  32761691 acttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 32761643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 4293050 - 4293163
Alignment:
Q  127 ctgatcgattgaagcttctgataatgatatagcttctgatgaagttg--cttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcatt 222  Q
    |||||| |||| |||||||| | ||||||||||||||||||||  ||  |||||||||  ||| |||||||||| || ||||||||||||||||||||||    
T  4293050 ctgatcaattgcagcttctggtgatgatatagcttctgatgaaaatgtgcttctgatgctcttctgcttctgatgaacttctgcttctgatgacgtcatt 4293149  T
Q  223 acttcagaggcact 236  Q
     |||||||||||||    
T  4293150 tcttcagaggcact 4293163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 12828080 - 12828161
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||| |||| ||||||||||||||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  12828080 ttctgcttctgatgacatcatcacttcagaggcacttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 12828161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 22387011 - 22387120
Alignment:
Q  173 gcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagt 272  Q
    |||| |||||||||| ||||||||| |  | |||||||||||||||||| |||||| |||||||    |||||| ||||||||| || ||||||||||||    
T  22387011 gcttatgatgaactt-gcttctgatgaactttgcttctgatgacgtcatcacttcaaaggcactttgtcttcaggagcacttcataatttcagacgcagt 22387109  T
Q  273 tttcttcagat 283  Q
    |||||||||||    
T  22387110 tttcttcagat 22387120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 25722816 - 25722668
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaa--gttgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||| |||||||||||||  ||||||||||||  |||| |||||||||| || ||||||||||||||||||||| ||||||| ||||    
T  25722816 agcttctggtgatgatacagcttctgatgaaatgttgcttctgatagacttctgcttctgatgaacttctgcttctgatgacgtcatcacttcagtggca 25722717  T
Q  235 ct-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |  | |||||||||||||  |  |||||||| |||||||||||||||    
T  25722716 cttgttagttcagaagcacttttag-cttcagacccagttttcttcagat 25722668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 25735416 - 25735268
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaa--gttgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||| | |||||||||||  ||||||||||||  |||| |||||||||| || ||||||||||||||||||||| ||||||| ||||    
T  25735416 agcttctgctgatgatacaacttctgatgaaatgttgcttctgatagacttctgcttctgatgaacttctgcttctgatgacgtcatcacttcagtggca 25735317  T
Q  235 ct-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |  | |||||||||||||  |  ||||||||||||||||||||||||    
T  25735316 cttgttagttcagaagcacttttag-cttcagacgcagttttcttcagat 25735268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 25788088 - 25788169
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  25788088 ttctgcttctgatgacgtcatcacttcagaagcacttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 25788169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 31572750 - 31572851
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagtt--gcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | ||||||| |||||||||||| ||  ||||||||||||||| |||||||||| || |||| ||||||||||||||||||||||||| |||    
T  31572750 agcttctggtgatgatatcgcttctgatgaaattctgcttctgatgaacttctgcttctgatgaacttctacttctgatgacgtcattacttcagaagca 31572849  T
Q  235 ct 236  Q
    ||    
T  31572850 ct 31572851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 283
Target Start/End: Original strand, 17047916 - 17048013
Alignment:
Q  188 tgcttctgataagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcag-ttttcttcagat 283  Q
    |||||||||| | || ||||||||||||||| || | ||||||||| || ||||||||||||||||||| || |||||||||||| ||||||||||||    
T  17047916 tgcttctgatgacttatgcttctgatgacgttatcatttcagaggcccttgaaacttcagaagcacttctaagcttcagacgcagtttttcttcagat 17048013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 5845487 - 5845567
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||||||||||||  ||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  5845487 ttctgcttctgatgacgtcattacttcagaatcactttagcttcagaagcactt--tagcttcagacgcagttttcttcagat 5845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 8654034 - 8654146
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| |||||||||| || |||||||||| |||||||||| |||||||| |||||  | ||||||| |||||| |   |||||||||    
T  8654034 ttgcttctgatgaccttctgcttctgatgagcttctgcttctaatgacgtcatcacttcagaagcactccagcttcagaggcactttag--cttcagacg 8654131  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  8654132 cagttttcttcagat 8654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 280
Target Start/End: Complemental strand, 11147073 - 11146963
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| ||| |||||| || |||||||||||||||| |||| |||||||| |||||  | ||||||||||||||  || |||||||||    
T  11147073 ttgcttctgatgaccttctgcatctgatgagcttctgcttctgatgacatcatcacttcagaagcacttcagcttcagaagcactt-taagcttcagacg 11146975  T
Q  269 cagttttcttca 280  Q
    ||||||||||||    
T  11146974 cagttttcttca 11146963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 11206129 - 11206192
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    ||||||||||||||||||  ||| | ||||||||||||||||||||||||||||||||||||||    
T  11206129 ttgtactttgtcaactcttcaatgatggacaagcacccaatgcttttcaaatgaacgttggcac 11206192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 7375567 - 7375486
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||  ||||||| || ||||||||||||||||||||||||    
T  7375567 ttctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggggcacttc-aagcttcagacgcagttttcttcagat 7375486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 10402910 - 10402829
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||||||  ||||||| |||||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  10402910 ttctgcttctgatgacgtcatcccttcagaagcacttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 10402829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 283
Target Start/End: Complemental strand, 17577665 - 17577508
Alignment:
Q  129 gatcgattgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcatta 223  Q
    |||| |||| |||||||| | ||||| | ||||||||||||    ||||||||||||| | | |||||||||| || || |||||||||| || |||| |    
T  17577665 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccatctgcttctgatgagcttatgcttctgataacatcatca 17577566  T
Q  224 cttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  17577565 cttcagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 17577508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20635753 - 20635838
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttc 85  Q
    |||||||||||||||||||||||   | ||||||||||| ||||||||||||||||||| ||||| |||||| | || ||||||||    
T  20635753 acactttgtactttgtcaactctctttgaaggacaagcatccaatgcttttcaaatgaaccgttgccacctttcctttagtctttc 20635838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 17043011 - 17043090
Alignment:
Q  205 gcttctgatgacgtcattacttcagaggcactgaaac--ttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    ||||||||||||||||  |||||||| || || ||||  ||||||||||||||  |||||||||||||||||||||||||    
T  17043011 gcttctgatgacgtcacaacttcagatgctcttaaacacttcagaagcacttcctaacttcagacgcagttttcttcaga 17043090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 19482964 - 19483085
Alignment:
Q  158 gcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaa 257  Q
    |||||||||||| |||| |||||||||||| ||||||||  |  | ||||||| |||||||||| |||||||| |||||    |||||| ||||||||||    
T  19482964 gcttctgatgaacttgcatctgatgaactt-gcttctgacgaact-tgcttctaatgacgtcatcacttcagaagcactttgtcttcaggagcacttcaa 19483061  T
Q  258 aacttcagacgcagttttcttcaga 282  Q
    | ||||||||| |||||||||||||    
T  19483062 a-cttcagacgtagttttcttcaga 19483085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 283
Target Start/End: Complemental strand, 25686557 - 25686445
Alignment:
Q  172 tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||| ||||| |||| |||||||||| || ||||||||||||||||||||| ||||||||||| | ||  | |||||||||||||   | |||||||||    
T  25686557 tgcttttgatggacttctgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcgcttgttagttcagaagcactt--tagcttcagacg 25686460  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  25686459 cagttttcttcagat 25686445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 25986453 - 25986565
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| |||||||||| |  ||||||||||||||||||||| |||||||| |||||  | |||||| ||||||    | |||||||||    
T  25986453 ttgcttctgatgaccttctgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcact--ctagcttcagacg 25986550  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  25986551 cagttttcttcagat 25986565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 26589815 - 26589939
Alignment:
Q  155 atagcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcactt 254  Q
    |||||||| |||||| ||||||||||||| ||| ||||||||| |  | ||||||||||||||||||||||||||| |||||    |||||| |||| ||    
T  26589815 atagcttcagatgaacttgcttctgatgacctt-gcttctgatgaact-tgcttctgatgacgtcattacttcagaagcactttgtcttcaggagcagtt 26589912  T
Q  255 caaaacttcagacgcagttttcttcaga 282  Q
    | |||||||||  | |||||||||||||    
T  26589913 c-aaacttcaggagtagttttcttcaga 26589939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 278
Target Start/End: Original strand, 17064527 - 17064675
Alignment:
Q  135 ttgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgataagttct-gcttctgatgacgtcattacttcagag 231  Q
    |||||||||||| | ||||||||| |||||||||  |  ||| ||||||||  | ||||||||||   |||| ||||||||||||||||   |||||||     
T  17064527 ttgaagcttctggtgatgatatagtttctgatgatatcttgcatctgatgacttctgcttctgatgtcttctagcttctgatgacgtcacagcttcagat 17064626  T
Q  232 gcactgaa--acttcagaagcacttcaaaacttcagacgcagttttctt 278  Q
    || || ||  ||||||||||||||||  |||||||||||||||||||||    
T  17064627 gctcttaagcacttcagaagcacttcctaacttcagacgcagttttctt 17064675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 18834445 - 18834379
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcaga 266  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||  |||||||||    
T  18834445 ttctgcttctgatgacgtcattacttcagaggcacttgttacttcaaaagcacttcttaacttcaga 18834379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 254
Target Start/End: Complemental strand, 17745629 - 17745505
Alignment:
Q  134 attgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcag 229  Q
    |||| |||||||| | ||||||| |||||||||||| |  |||||||||||  ||| ||||||||||  | |||||||||||||||| |||||||| |||    
T  17745629 attgtagcttctggtgatgatatcgcttctgatgaaatattgcttctgatggtcttctgcttctgatggacttctgcttctgatgacttcattactccag 17745530  T
Q  230 aggcactgaaacttcagaagcactt 254  Q
    | |||||  | ||||||||||||||    
T  17745529 aagcactttagcttcagaagcactt 17745505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 27166303 - 27166155
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag--ttgcttctgatgaactt-tgcttctgataag--ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | |||||||| |||||||||||   |||||||||||   ||| |||||||||| |   |||||||||||||||||||||  ||||||||||    
T  27166303 agcttctggtgatgatataacttctgatgaaaccttgcttctgatagtcttctgcttctgatgaactttctgcttctgatgacgtcat--cttcagaggc 27166206  T
Q  234 act-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||| |  |||||| |||||||||  | ||||||| ||||||||||||||||    
T  27166205 acttgttacttcataagcacttcttagcttcagatgcagttttcttcagat 27166155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 11235682 - 11235742
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttgg 65  Q
    ||||| ||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||    
T  11235682 ttgtaatttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttgg 11235742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 17608418 - 17608334
Alignment:
Q  6 ttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||   | ||||||||||| || |||||||||||||||| ||||| |||||| | || ||||||||||||    
T  17608418 ttgtactttgtcaactctttttgaaggacaagcatcccatgcttttcaaatgaatcgttgccacctttcctttagtctttcgctt 17608334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 17047737 - 17047795
Alignment:
Q  5 tttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||| || |||| ||||||||||| |||||||||||||| |||||    
T  17047737 tttgtactttgtcaactcttaaaaaag-acaagcacccagtgcttttcaaatgaccgttg 17047795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 18555453 - 18555516
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    ||||||||||||||||||  ||| | | ||||||||||| ||||||||||||||||||||||||    
T  18555453 ttgtactttgtcaactcttcaatgaggtacaagcacccagtgcttttcaaatgaacgttggcac 18555516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 31931606 - 31931669
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    ||||||||||||||||||  ||| | ||||||||||||| ||||||||||||||||||| ||||    
T  31931606 ttgtactttgtcaactcttcaatgagggacaagcacccagtgcttttcaaatgaacgttcgcac 31931669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 19065937 - 19065860
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    |||||||||||||||||| |||||||| |||||    |||||| |||||||| |||||||||  |||||||||||||||    
T  19065937 tgcttctgatgacgtcatcacttcagaagcactttgtcttcaggagcacttc-aaacttcaggagcagttttcttcaga 19065860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 9933684 - 9933624
Alignment:
Q  6 ttgtactttgtcaactctgaataa--aggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  ||  |||||||||||||| |||||||||||||| |||||    
T  9933684 ttgtactttgtcaactctgataaagaaggacaagcacccagtgcttttcaaatgaccgttg 9933624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 283
Target Start/End: Complemental strand, 16123348 - 16123254
Alignment:
Q  189 gcttctgataag-ttctgcttctgatgacgtca-ttacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||| || |||||||||||||||||||| |||||||||| |||||  | |||||||| |||||   | ||||||||||| ||||||||||||    
T  16123348 gcttctgatgagcttctgcttctgatgacgtcatttacttcagaagcactccagcttcagaaacactt--tagcttcagacgcaattttcttcagat 16123254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 18498929 - 18498986
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa 169  Q
    |||||||||||||| |||||| | || |||||||| | ||||||||||||||||||||    
T  18498929 ttcagattgaatcttctgatccactgtagcttctggtgatgatatagcttctgatgaa 18498986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 25675343 - 25675416
Alignment:
Q  5 tttgtactttgtcaactc-tgaataaaggacaagcacccaatgc-ttttcaaatgaacgttggcaccttccttt 76  Q
    |||||||||||||||||| | ||| ||||||||||||||| ||| ||||||||||| |||||  ||||||||||    
T  25675343 tttgtactttgtcaactcttcaatgaaggacaagcacccagtgctttttcaaatgaccgttgataccttccttt 25675416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 22387010 - 22387050
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgat 197  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  22387010 agcttatgatgaacttgcttctgatgaactttgcttctgat 22387050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 9112337 - 9112268
Alignment:
Q  171 ttgcttctgatgaa---ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||   ||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  9112337 ttgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 9112268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 9122974 - 9122905
Alignment:
Q  171 ttgcttctgatgaa---ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||   ||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  9122974 ttgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 9122905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 12953143 - 12953080
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    ||||||||||||||||||  ||| | | ||||||||| | ||||||||||||||||||||||||    
T  12953143 ttgtactttgtcaactcttcaatgaggtacaagcacctagtgcttttcaaatgaacgttggcac 12953080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 13913435 - 13913470
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  13913435 ttctgcttctgatgacgtcattacttcagaagcact 13913470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 13928574 - 13928609
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  13928574 ttctgcttctgatgacgtcattacttcagaagcact 13928609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 18498803 - 18498874
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  ||| | | | ||||||||| |||||||||||||||||||| ||| |||||||    
T  18498803 ttgtactttgtcaactcttcaatgatgtataagcacccagtgcttttcaaatgaacgttgtcactttccttt 18498874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 22386836 - 22386895
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaac 60  Q
    |||||| ||||||||||||||||   | ||||||||||| ||||||| ||||||||||||    
T  22386836 acacttggtactttgtcaactctctttgaaggacaagcatccaatgcctttcaaatgaac 22386895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 25518873 - 25518932
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  ||| ||||||||||||||| ||||||||| |||| |||||    
T  25518873 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcagatgaccgttg 25518932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 4292909 - 4292969
Alignment:
Q  6 ttgtactttgtcaactctgaataa--aggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  ||  |||||||| | |||||||||||||||||| |||||    
T  4292909 ttgtactttgtcaactctgatgaagaaggacaagtatccaatgcttttcaaatgaccgttg 4292969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 17316429 - 17316389
Alignment:
Q  241 cttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  17316429 cttcaggagcacttcaaa-cttcagacgcagttttcttcaga 17316389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 17741715 - 17741662
Alignment:
Q  6 ttgtactttgtcaactctgaata-aaggacaagcacccaatgcttttcaaatga 58  Q
    ||||||||||||||||||  | | ||||||||||||||| ||||||||||||||    
T  17741715 ttgtactttgtcaactctttagagaaggacaagcacccagtgcttttcaaatga 17741662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 25679419 - 25679480
Alignment:
Q  5 tttgtactttgtcaactc-tgaataaaggacaagcacccaatgc-ttttcaaatgaacgttg 64  Q
    |||||||||||||||||| | ||| ||||||||||||||| ||| ||||||||||| |||||    
T  25679419 tttgtactttgtcaactcttcaatgaaggacaagcacccagtgctttttcaaatgaccgttg 25679480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 25735572 - 25735511
Alignment:
Q  5 tttgtactttgtcaactctg-aataaaggacaagcacccaatgc-ttttcaaatgaacgttg 64  Q
    |||||||||||||||||||  ||| ||||||||||||||| ||| ||||||||||| |||||    
T  25735572 tttgtactttgtcaactcttcaatgaaggacaagcacccagtgctttttcaaatgaccgttg 25735511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 16877452 - 16877484
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||||||||||||||| |||||    
T  16877452 tgcttctgatgacgtcattacttcagaagcact 16877484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 25686762 - 25686702
Alignment:
Q  6 ttgtactttgtcaactc-tgaataaaggacaagcacccaatgctt-ttcaaatgaacgttg 64  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||| ||||||||| |||||    
T  25686762 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttcttcaaatgaccgttg 25686702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 6 - 275
Target Start/End: Original strand, 28474264 - 28474538
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct---------------- 88  Q
    ||||||||||||||||||  || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||                    
T  28474264 ttgtactttgtcaactcttcaacaaaggacaagcacccagtgcttttcaaatgaacgttggcaccttcctttgagtctttcgctctcttagacgaggtta 28474363  T
Q  89 --tccaataaacagccattttatacttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagttgcttctgatgaact 186  Q
      |||||||||||||||||| | |||||||||||||||| |||||| | || |||||||| | || |||||||||               ||||||||||    
T  28474364 aatccaataaacagccatttgaaacttcagattgaatcttctgatcaactgtagcttctggtgatcatatagctt---------------ctgatgaact 28474448  T
Q  187 ttgcttctgataagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagtttt 275  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| ||||||| |||||||    
T  28474449 ttgcttctgatgagttctgcttctgatgacgtcattactttagatgcacttgaaacttcagaagcacttcaaaatttcagacacagtttt 28474538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 112 - 283
Target Start/End: Complemental strand, 20883801 - 20883625
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgct 207  Q
    |||||||||||||| |||||| | || |||||||| | |||||||||||||||||||| |  ||||||||||| |||| || ||||||| || |||||||    
T  20883801 ttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatggacttctggttctgatgaacttctgct 20883702  T
Q  208 tctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  20883701 tctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagat 20883625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 112 - 283
Target Start/End: Complemental strand, 45070572 - 45070398
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagtt--gcttctgatgaactttgcttctgataagttctgcttc 209  Q
    |||||||||||||| |||| | | |  | |||||| | |||||||||||||||||||| ||  |||||| ||||||||||||||||||   |||||||||    
T  45070572 ttcagattgaatcttctgaacaactttaacttctggtgatgatatagcttctgatgaaattttgcttcttatgaactttgcttctgatgtcttctgcttc 45070473  T
Q  210 tgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  45070472 tgatgacgtcatcacttcagaggcacttgaaacttcagaaacacttcatagcttcagacgcagttttcttcagat 45070398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 112 - 283
Target Start/End: Original strand, 20799226 - 20799402
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgataag-ttctgctt 208  Q
    |||||||||||||| |||||| | ||  ||||||| | ||||| |||||||||||||| |  ||||||||||||||||| |||||||| |  ||||||||    
T  20799226 ttcagattgaatctcctgatcaactgttgcttctggtgatgatgtagcttctgatgaaatcttgcttctgatgaactttacttctgatgatcttctgctt 20799325  T
Q  209 ctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcag-ttttcttcagat 283  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  20799326 ctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagtttttcttcagat 20799402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 189 - 283
Target Start/End: Original strand, 23927268 - 23927364
Alignment:
Q  189 gcttctgat-aagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||| || ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  23927268 gcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagat 23927364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 283
Target Start/End: Complemental strand, 18310893 - 18310715
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctg 205  Q
    |||||| ||| ||| | |||||| |||| |||||||| | |||||||||||||||||||| |  ||||||||||| |||| || ||||||| || |||||    
T  18310893 acttcaaattaaatttactgatcaattgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatggacttctgtttctgatgaacttctg 18310794  T
Q  206 cttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||| |||| ||||||||| |  ||||||||| ||||| | | ||||||||||||||||||||||||    
T  18310793 cttctgatgacgtcatcactttagaggcactagttacttcagaaccactttagagcttcagacgcagttttcttcagat 18310715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 675760 - 675908
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcac 235  Q
    |||||||| | |||||||||||||||||||| |  |||||||| || |||||||||||||| |  |||||||||||||||||||||| ||||||||||||    
T  675760 agcttctggtgatgatatagcttctgatgaaatcttgcttctggtggactttgcttctgatgatcttctgcttctgatgacgtcatttcttcagaggcac 675859  T
Q  236 -tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
     ||  ||||||||| ||||||| | ||| ||||||||||| ||||||||    
T  675860 ttgttacttcagaaacacttcatagctttagacgcagtttccttcagat 675908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 156 - 283
Target Start/End: Complemental strand, 22609868 - 22609736
Alignment:
Q  156 tagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagc 250  Q
    |||||||||||||| |  ||||||||||| |||| ||||||||||| | ||||||||||||||||||||| |||||||| ||||| |  |||||||||||    
T  22609868 tagcttctgatgaaatcttgcttctgatggacttctgcttctgatagacttctgcttctgatgacgtcatcacttcagatgcacttgttacttcagaagc 22609769  T
Q  251 acttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||| | ||||||||||||||||||||||||    
T  22609768 acttcatagcttcagacgcagttttcttcagat 22609736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 46180752 - 46180639
Alignment:
Q  173 gcttctgatgaact-ttgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| | ||||||||||    
T  46180752 gcttctgatgaaatcttgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgtaacttcagaaacacttcatagcttcagacgc 46180653  T
Q  270 agttttcttcagat 283  Q
    | ||||||||||||    
T  46180652 aattttcttcagat 46180639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 283
Target Start/End: Original strand, 12947026 - 12947180
Alignment:
Q  135 ttgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcaga 230  Q
    |||||||||||| | |||||||||||||||||||| |  |||||||||||| ||| ||||||||||||  |||||||||||||||||||||| ||||||     
T  12947026 ttgaagcttctggtgatgatatagcttctgatgaaatcgtgcttctgatgatcttctgcttctgataaacttctgcttctgatgacgtcatttcttcagg 12947125  T
Q  231 ggcac--tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||  ||  ||||||||||||||||    |||||||| |||||||||||||||    
T  12947126 ggcactttgttacttcagaagcacttcttggcttcagacacagttttcttcagat 12947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 23064986 - 23065069
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  23064986 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcaccttccttttagtctttcgct 23065069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 19038044 - 19038127
Alignment:
Q  6 ttgtactttgtcaactctgaa-taaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||||||  | | ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  19038044 ttgtactttgtcaactcttcagtgaaggacaagcacccagtgcttttcaaatgaacgttggcaccttccttttagtctttcgct 19038127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 20251815 - 20251894
Alignment:
Q  10 actttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    |||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||    
T  20251815 actttgtcaactctcaatgaaggacaagcacccaatgtttttcaaacgaacgttggcaccttccctttagtctttcgctt 20251894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 283
Target Start/End: Complemental strand, 11194971 - 11194811
Alignment:
Q  127 ctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcatt 222  Q
    |||||| |||| |||||||| | |||||||||||||||||||| |  |||||||||||   || |||||||||| || ||||||| ||||||||||||||    
T  11194971 ctgatcaattgcagcttctg-tgatgatatagcttctgatgaaatcttgcttctgatggtattctgcttctgatgaacttctgctcctgatgacgtcatt 11194873  T
Q  223 acttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||| |||| |  ||||||||||||||||  | |||| |||||||||||||||||||    
T  11194872 acttcagagacacttgttacttcagaagcacttcttagcttccgacgcagttttcttcagat 11194811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26548304 - 26548215
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaac-gttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||| | || ||||||||||| ||||||||||||    
T  26548304 acactttgtactttgtcaactcttatagaaggacaagcacccaatgcttttcaaatgaactgctgccaccttccttttagtctttcgctt 26548215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 157 - 282
Target Start/End: Complemental strand, 34255400 - 34255278
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttca 256  Q
    |||||||| |||| ||||||||||| ||||| ||||||||| |  | |||||||||||||||||||||||||||||||||    |||||| ||||||||     
T  34255400 agcttctggtgaacttgcttctgataaactt-gcttctgatgaact-tgcttctgatgacgtcattacttcagaggcactttgtcttcaggagcacttc- 34255304  T
Q  257 aaacttcagacgcagttttcttcaga 282  Q
    |||||| |||||||||||||||||||    
T  34255303 aaactttagacgcagttttcttcaga 34255278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 110 - 283
Target Start/End: Complemental strand, 14388047 - 14387869
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctg 205  Q
    ||||||| || ||| | |||||| | || |||||||| | |||||||||||||||||||| |  ||||||||||| |||| ||||| |||| || |||||    
T  14388047 acttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatggacttctgcttttgatgaacttctg 14387948  T
Q  206 cttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||| ||||| |||| ||||||||| |  ||||||||| ||||| | | |||||||| |||||||||||||||    
T  14387947 cttctgatgatgtcatcactttagaggcactagttacttcagaaccactttagagcttcagacacagttttcttcagat 14387869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 28380032 - 28380115
Alignment:
Q  6 ttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    |||||||||||||||||| ||  |||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||    
T  28380032 ttgtactttgtcaactctcaaagaaggacaagcactcaatgcttttcaaacgaacgttggcacattccctttagtctttcgctt 28380115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 39193966 - 39193854
Alignment:
Q  173 gcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    ||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||| ||| ||||| || |||||| |||||||| || ||||||||||    
T  39193966 gcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttaagatgcacttaagcttcaggagcacttc-aagcttcagacgc 39193868  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  39193867 agttttcttcagat 39193854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 283
Target Start/End: Original strand, 47195567 - 47195724
Alignment:
Q  129 gatcgattgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcatta 223  Q
    |||| |||| |||||||| | ||||| | ||||||||||||    ||||||||||||| ||| |||||||||| || || ||||||||||||||| || |    
T  47195567 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgagcttatgcttctgatgacgttatca 47195666  T
Q  224 cttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  47195667 cttcagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 47195724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 5929740 - 5929809
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcct 74  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  5929740 ttgtactttgtcaactcttcaataaaggacaagcacccagtgcttttcaaatgaacgttggcgccttcct 5929809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 283
Target Start/End: Complemental strand, 9050325 - 9050231
Alignment:
Q  188 tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||| || |||||||||||||||||||||||||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  9050325 tgcttctgatgagcttctgcttctgatgacgtcattacttcagaagcactccagcttcagaagcactt--tagcttcagacgcagttttcttcagat 9050231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22019369 - 22019458
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaac-gttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||||||| | | | |||||||||||||||||||||||||||||| || | |||||||| || ||||||||||||    
T  22019369 acactttgtactttgtcaactctcattgagggacaagcacccaatgcttttcaaatgaacagtagccaccttccctttagtctttcgctt 22019458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22642928 - 22643017
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgctt 89  Q
    |||||||||||||||||||||||   | ||||||||||||||||||||||||||||||| ||||| |||||| | || ||||||||||||    
T  22642928 acactttgtactttgtcaactctctttgaaggacaagcacccaatgcttttcaaatgaaccgttgccacctttcctttagtctttcgctt 22643017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 249
Target Start/End: Complemental strand, 41132537 - 41132393
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctg 205  Q
    ||||||| || ||| | |||||| | || |||||||| | |||||||||||||||||||| |  ||||||||||| |||| | ||||||||  | |||||    
T  41132537 acttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatggacttctacttctgatggacttctg 41132438  T
Q  206 cttctgatgacgtcattacttcagaggcac-tgaaacttcagaag 249  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||    
T  41132437 cttctgatgacgtcattactttagaggcacttgaaacttcagaag 41132393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 52350729 - 52350644
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcacctt-cctttgagtctttcgctt 89  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||||||||||    
T  52350729 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaagtgaacgttggcaccttcccttttagtctttcgctt 52350644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44201044 - 44201132
Alignment:
Q  1 acactttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    |||||||||||||||||||||||  ||| |||||||||||| || |||||||||||||||||||||| ||||||| |  ||||||||||    
T  44201044 acactttgtactttgtcaactcttcaatgaaggacaagcactcagtgcttttcaaatgaacgttggcgccttcctctttgtctttcgct 44201132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 283
Target Start/End: Original strand, 17371249 - 17371374
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttca 256  Q
    ||||||||||  | ||||||||||||||||| ||||||||| |  | ||||||| |||||||||| |||||| || ||||    |||||| |||||||||    
T  17371249 agcttctgatagacttgcttctgatgaactt-gcttctgatgaactttgcttctaatgacgtcatcacttcaaagacactttgtcttcaggagcacttca 17371347  T
Q  257 aaacttcagacgcagttttcttcagat 283  Q
     |||||||||| |||||||||||||||    
T  17371348 taacttcagacacagttttcttcagat 17371374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 266
Target Start/End: Complemental strand, 19170206 - 19170113
Alignment:
Q  173 gcttctgatgaactttgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcaga 266  Q
    ||||||||||||||| ||||||||| || || |||||||||||||||||| ||||||||||||||    |||||| |||||||||||||||||||    
T  19170206 gcttctgatgaactt-gcttctgatgaacttttgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttcaaaacttcaga 19170113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22655510 - 22655599
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgctt 89  Q
    |||||||||||||||||||||||   | ||||||||||||||||||||||||||||||| | ||| |||||| | || ||||||||||||    
T  22655510 acactttgtactttgtcaactctctttgaaggacaagcacccaatgcttttcaaatgaaccattgccacctttcctttagtctttcgctt 22655599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 26576986 - 26577065
Alignment:
Q  203 ctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||| |||||||| |||||  | |||||| |||||||| || ||||||||||||||||||||||||    
T  26576986 ctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagcacttc-aagcttcagacgcagttttcttcagat 26577065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 148055 - 147975
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  148055 ttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 147975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 154130 - 154050
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  154130 ttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 154050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 5974130 - 5974210
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  5974130 ttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 5974210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 283
Target Start/End: Complemental strand, 7689354 - 7689199
Alignment:
Q  134 attgaagcttctgataatgatatagcttctgatgaag----ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttc 227  Q
    |||| |||||||| | ||||||| ||||||||||||     | ||||||| ||| ||| |||||||||| || ||||||||||||||||||||| |||||    
T  7689354 attgtagcttctggtgatgatatcgcttctgatgaaaaccttagcttctgttgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttc 7689255  T
Q  228 agaggcactgaaacttcagaagcacttcaaaacttcagacgcag-ttttcttcagat 283  Q
    ||| |||||  | ||||||||||||||  || |||||||||||| ||||||||||||    
T  7689254 agatgcacttcagcttcagaagcactt-taagcttcagacgcagtttttcttcagat 7689199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 21544252 - 21544331
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||| ||||| ||||||||||||||    |||||| ||||||||| ||||||||||||| ||||||||||||    
T  21544252 tgcttctgatgatgtcatcacttcagaggcactttgtcttcaggagcacttcataacttcagacgcatttttcttcagat 21544331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 39587335 - 39587415
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||| ||||||||||| ||||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  39587335 ttctgcttccgatgacgtcatcacttcagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 39587415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 20441158 - 20441077
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||  || ||||| ||||||||||||||||||    
T  20441158 ttctgcttctgatgacgtcatcacttcagaagcactctagcttcagaagcactt-taagcttcaaacgcagttttcttcagat 20441077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 19215808 - 19215914
Alignment:
Q  173 gcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagt 272  Q
    ||||||| |||| |||||||||||| | || |||||||||||||| ||| |||||||| |||||    |||||| ||||||||||| |||||||||||||    
T  19215808 gcttctggtgaa-tttgcttctgatgaatt-tgcttctgatgacgacatcacttcagaagcactttgtcttcaggagcacttcaaa-cttcagacgcagt 19215904  T
Q  273 tttcttcaga 282  Q
    ||||||||||    
T  19215905 tttcttcaga 19215914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 37642478 - 37642556
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||| |||||||||| |||||||| |||||    |||||| ||||||||||| ||||||||||||||||||||||||    
T  37642478 tgcttctaatgacgtcatcacttcagaagcactttgtcttcaggagcacttcaaa-cttcagacgcagttttcttcagat 37642556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 46180924 - 46180861
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    ||||||||||||||||||  ||| | ||||||||||||| ||||||||||||||||||||||||    
T  46180924 ttgtactttgtcaactcttcaatgagggacaagcacccagtgcttttcaaatgaacgttggcac 46180861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 45070699 - 45070633
Alignment:
Q  5 tttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcacct 70  Q
    |||||| ||||||||||||  ||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  45070699 tttgtaatttgtcaactcttcaatgaaggacaggcacccagtgcttttcaaatgaacgttggcacct 45070633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 283
Target Start/End: Original strand, 17957603 - 17957697
Alignment:
Q  189 gcttctgataag-ttctgcttctgatgacgtca-ttacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||| || |||||||||||||||||||| |||||||||| |||||  | ||||||||||||||   | ||||||||||| ||||||||||||    
T  17957603 gcttctgatgagcttctgcttctgatgacgtcatttacttcagatgcactccagcttcagaagcactt--tagcttcagacgcaattttcttcagat 17957697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 20799101 - 20799164
Alignment:
Q  6 ttgtactttgtcaactctgaataaagg-acaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    ||||||||||||||||||  | ||||| ||||||||||| |||||| |||||||||||||||||    
T  20799101 ttgtactttgtcaactcttcaaaaaggtacaagcacccagtgctttccaaatgaacgttggcac 20799164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 14388171 - 14388111
Alignment:
Q  6 ttgtactttgtcaactctgaataa--aggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  ||  |||||||||||||| |||||||||||||| |||||    
T  14388171 ttgtactttgtcaactctgataaagaaggacaagcacccagtgcttttcaaatgaccgttg 14388111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17371075 - 17371164
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaac-gttggcaccttcctttgagtctttcgctt 89  Q
    |||||| ||||||||||||||||   | ||||||||||| ||||||| |||||||||||| |||  |||||| | || ||||||||||||    
T  17371075 acacttcgtactttgtcaactctctttgaaggacaagcatccaatgcctttcaaatgaactgtttccacctttcctttagtctttcgctt 17371164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 18311017 - 18310957
Alignment:
Q  6 ttgtactttgtcaactctgaataa--aggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  ||  |||||||||||||| |||||||||||||| |||||    
T  18311017 ttgtactttgtcaactctgataaagaaggacaagcacccagtgcttttcaaatgaccgttg 18310957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 18381777 - 18381709
Alignment:
Q  171 ttgcttctgatgaa--ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||  | ||||||||||| || ||||||||||||||||||||| |||||||| |||||    
T  18381777 ttgcttctgatgaaaaccttgcttctgattagcttctgcttctgatgacgtcatcacttcagaagcact 18381709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 675608 - 675667
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  ||| ||||||||||||| | |||||||||||||| |||||    
T  675608 ttgtactttgtcaactcttcaatgaaggacaagcaccgagtgcttttcaaatgaccgttg 675667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 12730913 - 12730948
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  12730913 ttctgcttctgatgacgtcattacttcagaagcact 12730948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 12741506 - 12741541
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  12741506 ttctgcttctgatgacgtcattacttcagaagcact 12741541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 21895568 - 21895648
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||||||  ||||||| |||||  | |||||| ||||||||  | ||||||  ||||||||||||||||    
T  21895568 ttctgcttctgatgacgtcatctcttcagaagcacttcagcttcaggagcacttc--agcttcaggagcagttttcttcagat 21895648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 35013254 - 35013323
Alignment:
Q  171 ttgcttctgatgaa---ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||   ||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  35013254 ttgcttctgatgaaaaactttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 35013323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 41132660 - 41132601
Alignment:
Q  6 ttgtactttgtcaactctgaata-aaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||  | | |||||||| ||||||||||||||||||||| |||||    
T  41132660 ttgtactttgtcaactcttcaaagaaggacaaacacccaatgcttttcaaatgaccgttg 41132601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 46180796 - 46180741
Alignment:
Q  114 cagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa 169  Q
    |||||||||||| |||||| | || |||||||| | ||||||||||||||||||||    
T  46180796 cagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaa 46180741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19170381 - 19170324
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa 59  Q
    |||||||||||||||||||||| |  | ||||||||||| || ||||||||||||||||    
T  19170381 acactttgtactttgtcaactc-gcttgaaggacaagcatcccatgcttttcaaatgaa 19170324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 21204786 - 21204748
Alignment:
Q  159 cttctgatgaagttgcttctgatgaactttgcttctgat 197  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  21204786 cttctgatgaacttgcttctgacgaactttgcttctgat 21204748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 23024998 - 23025075
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    |||||||||||||||||| |||||||| |||||    |||||| || ||||| |||||||||  |||||||||||||||    
T  23024998 tgcttctgatgacgtcatcacttcagaagcactttgtcttcaggaggacttc-aaacttcaggagcagttttcttcaga 23025075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 21544070 - 21544151
Alignment:
Q  9 tactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgctt 89  Q
    |||||||||||||||   | ||| ||||||| ||||||||||||||||||| ||||| ||| || | || ||||||||||||    
T  21544070 tactttgtcaactctctttgaagtacaagcatccaatgcttttcaaatgaatcgttgccacttttcctttagtctttcgctt 21544151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 23580201 - 23580138
Alignment:
Q  171 ttgcttctgatgaa---ctttgcttctgataag-ttctgcttctgatgacgtcattacttcaga 230  Q
    ||||||||||||||   ||||||||||||| |  ||||||||||||||||||||| ||||||||    
T  23580201 ttgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttcaga 23580138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 12897821 - 12897789
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||||||||||||||| |||||    
T  12897821 tgcttctgatgacgtcattacttcagaagcact 12897789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 112 - 283
Target Start/End: Original strand, 29816 - 29992
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaacttt-gcttctgat-aagttctgct 207  Q
    |||||||||||| | |||||| | || |||||||| | |||||||||||||||||||| |  ||||||||||||||||| ||||||||| || |||||||    
T  29816 ttcagattgaatattctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatgaacttttgcttctgatgaacttctgct 29915  T
Q  208 tctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  29916 tctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagat 29992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 283
Target Start/End: Complemental strand, 36634 - 36538
Alignment:
Q  187 ttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||| || ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||  || ||||||||||||||||||||||||    
T  36634 ttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcagaagcactt-taagcttcagacgcagttttcttcagat 36538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 112 - 283
Target Start/End: Complemental strand, 6279 - 6104
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgat-aagttctgctt 208  Q
    |||||||||||||| |||||| | || |||||||| | |||||||||||| ||||||| |  |||||||||| ||||||||||||||| || || |||||    
T  6279 ttcagattgaatcttctgatccactgtagcttctggtgatgatatagcttatgatgaaatcttgcttctgattaactttgcttctgatgaacttatgctt 6180  T
Q  209 ctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  6179 ctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagat 6104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 6405 - 6342
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    ||||||||||||||||||  ||| | ||||||||||||| ||||||||||||||||||||||||    
T  6405 ttgtactttgtcaactcttcaatgagggacaagcacccagtgcttttcaaatgaacgttggcac 6342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 112 - 283
Target Start/End: Original strand, 2161 - 2335
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagtt--gcttctgatgaactttgcttctgataagttctgcttc 209  Q
    |||||||||||| | |||||| | || |||||||| | |||||||||||||||||||| ||  ||||||||||||||||||||||||| | |||||||||    
T  2161 ttcagattgaatattctgatcaactgtagcttctggtgatgatatagcttctgatgaaattttgcttctgatgaactttgcttctgatgacttctgcttc 2260  T
Q  210 tgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||| |||||||||||||| |||| | ||||||||||| ||||||| | ||||||||||||||||||||||||    
T  2261 tgatgatgtcattacttcagaagcacttaaaacttcagaaacacttcatagcttcagacgcagttttcttcagat 2335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 2034 - 2106
Alignment:
Q  5 tttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    |||||||||||||||||||  ||| ||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  2034 tttgtactttgtcaactcttcaatgaaggacaggcacccagtgcttttcaaatgaacgttggcacctcccttt 2106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 163493 - 163641
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcac 235  Q
    |||||||| | |||||||||||||||||||| |  ||||||||||||||||||||||||||  | ||||||||||||||||||||||| |||||||||||    
T  163493 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatgaactttgcttctgatggacttctgcttctgatgacgtcattatttcagaggcac 163592  T
Q  236 t-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | |||||||||||||||||||| | ||||||||| ||||||||||||||    
T  163593 ttgaaacttcagaagcacttcatagcttcagacgtagttttcttcagat 163641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 112 - 283
Target Start/End: Original strand, 35877 - 36053
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgct 207  Q
    ||||| |||||| | |||||| | || |||||||| | |||||||||||||||||||| |  ||||||||||| |||| |||||||||| || |||||||    
T  35877 ttcagtttgaatatactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatggacttctgcttctgatgaacttctgct 35976  T
Q  208 tctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||| |||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  35977 tctgatgacatcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagat 36053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 35752 - 35823
Alignment:
Q  6 ttgtactttgtcaactctgaata-aaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  | | ||||||||||||||| ||||||||||||||||||||| |||| |||||    
T  35752 ttgtactttgtcaactcttcaaagaaggacaagcacccagtgcttttcaaatgaacgttggtacctcccttt 35823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 13058 - 13207
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  |||||||||||  ||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  13058 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggtcttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggca 13157  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||||||||||||||||||||  | ||||||||||||||||||||||||    
T  13158 cttgaaacttcagaagcacttcttagcttcagacgcagttttcttcagat 13207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 5682 - 5795
Alignment:
Q  173 gcttctgatgaact-ttgcttctgata-agttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | |||||||||||  | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||||||||||    
T  5682 gcttctgatgaaatcttgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcacttcttagcttcagacgc 5781  T
Q  270 agttttcttcagat 283  Q
    ||||||||||||||    
T  5782 agttttcttcagat 5795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 173 - 283
Target Start/End: Original strand, 1106 - 1218
Alignment:
Q  173 gcttctgatgaact-ttgcttctgataagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgca 270  Q
    |||||||||||| | ||||||||||| | |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| | |||||||||||    
T  1106 gcttctgatgaaatcttgcttctgatgacttctgcttctgatgacgtcatttcttcagaggcacttgaaacttcagaagcacttcatagcttcagacgca 1205  T
Q  271 gttttcttcagat 283  Q
    |||||||||||||    
T  1206 gttttcttcagat 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 933 - 1018
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgc-ttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||| || |||||   ||||||||||    
T  933 ttgtactttgtcaactcttcaataaaggacaagcacccagtgctttttcaaatgaacgttggcaactccctttcgatctttcgctt 1018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 1060 - 1117
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa 169  Q
    |||||||||||||| |||||| | || |||||||| | ||||||||||||||||||||    
T  1060 ttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaa 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 84 - 262
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa--gttgcttctgatgaactt-tgcttctgat-aagttctg 205  Q
    ||||||| |||||| | |||||| | || |||||||| | ||||||||||||||||||||   |||||||||||| |||| |||||||||| || |||||    
T  84 acttcagtttgaatatactgatcaactgtagcttctggtgatgatatagcttctgatgaaatattgcttctgatggacttctgcttctgatgaacttctg 183  T
Q  206 cttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||||   |  ||||||||||||||||||||||||    
T  184 cttctgatgatgtcatcacttcagaggcacttgaaacttcagaagcactcataggcttcagacgcagttttcttcagat 262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 15205 - 15383
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctg 205  Q
    ||||||| || ||| | |||||| | || |||||||| | |||||| ||||||||||||| |  ||||||||||| |||| |||||||||| || |||||    
T  15205 acttcagtttaaatatactgatcaactgtagcttctggtgatgatacagcttctgatgaaatcttgcttctgatggacttctgcttctgatgaacttctg 15304  T
Q  206 cttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||| |||||||||| |||||||||||||| |||||||||||||||||||| | ||||||| ||||||||||||||||    
T  15305 cttctaatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagaagcagttttcttcagat 15383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 10176 - 10027
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | ||||||||| |||||||||| |  |||||||||||  ||| ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  10176 agcttctggtgatgatatagtttctgatgaaatcttgcttctgatggtcttctgcttctgatggacttctgcttctgatgacgtcattacttcagaggca 10077  T
Q  235 ct-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    || |||||||||||||||||| | | ||||||||||||||||||||||||    
T  10076 cttgaaacttcagaagcactttatagcttcagacgcagttttcttcagat 10027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 12004 - 11855
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  |||||||||||  ||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  12004 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggtcttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggca 11905  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  ||||||||||||||||  | ||||||||||||||||||||||||    
T  11904 cttgttacttcagaagcacttcttagcttcagacgcagttttcttcagat 11855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 283
Target Start/End: Complemental strand, 15847 - 15686
Alignment:
Q  127 ctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcatt 222  Q
    |||||| |||| |||||||| | |||||||||||||||||||| |  |||||| ||||  ||| ||||||||||  | |||||||||| |||||||||||    
T  15847 ctgatcaattgcagcttctggtgatgatatagcttctgatgaaatcttgcttcagatggtcttctgcttctgatggacttctgcttcttatgacgtcatt 15748  T
Q  223 acttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||| ||||||| |  |||| |||||||||||  | ||||||||||||||||||||||||    
T  15747 acttcataggcacttggtacttaagaagcacttcttagcttcagacgcagttttcttcagat 15686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 12157 - 12097
Alignment:
Q  6 ttgtactttgtcaactctgaata--aaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  |  ||||||||| ||||| |||||||||||||| |||||    
T  12157 ttgtactttgtcaactctgataacgaaggacaagtacccagtgcttttcaaatgaccgttg 12097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 2332 - 2509
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgataag-ttctg 205  Q
    ||||||| |||||| | |||||| | || |||||||| | |||||||||||| ||| ||| |  ||||||||||| |||| |||||||||| || |||||    
T  2332 acttcagtttgaatatactgatcaactgtagcttctggtgatgatatagcttatgaggaaatactgcttctgatggacttctgcttctgatgagcttctg 2431  T
Q  206 cttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||| ||| | |||||||||||| |||||||||||    
T  2432 cttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcac-tcatagcttcagacgcagctttcttcagat 2509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 2209 - 2280
Alignment:
Q  6 ttgtactttgtcaactctgaata-aaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  | | ||||| | ||||||| ||||||||||||||||||||| |||| |||||    
T  2209 ttgtactttgtcaactcttcaaagaaggaaaggcacccagtgcttttcaaatgaacgttggtacctcccttt 2280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 150 - 283
Target Start/End: Complemental strand, 56658 - 56520
Alignment:
Q  150 atgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttc 244  Q
    |||||||||||||||||||| |  |||||||||||  ||| |||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||    
T  56658 atgatatagcttctgatgaaatcttgcttctgatggtcttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgaaacttc 56559  T
Q  245 agaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |  ||||||||  | ||| ||||||||||||||||||||    
T  56558 aagagcacttcttagcttgagacgcagttttcttcagat 56520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 110 - 283
Target Start/End: Original strand, 69935 - 70113
Alignment:
Q  110 acttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa--gttgcttctgatgaactt-tgcttctgat-aagttctg 205  Q
    ||||||| |||||| | |||||| | || |||||||| | ||||||||||||||||||||   |||||||||||| |||| |||||||||| || || ||    
T  69935 acttcagtttgaatatactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatggacttctgcttctgatgaacttttg 70034  T
Q  206 cttctgatgacgtcattacttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||| || ||||||||||||||||||||| ||  ||||||||| ||||| | | ||||||||||||||||||||||||    
T  70035 cttctaattacgtcattacttcagaggcacttgttacttcagaaccactttatagcttcagacgcagttttcttcagat 70113  T

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Target: scaffold0410 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 6942 - 7056
Alignment:
Q  172 tgcttctgatgaactt-tgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||| |||| |||||||||| || ||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| | ||||||| |    
T  6942 tgcttctgatggacttctgcttctgatgaacttctgcttctgttgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagatg 7041  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  7042 cagttttcttcagat 7056  T

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Target: scaffold0410; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 15944 - 16003
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    |||||| |||||||||||  ||| ||||||||||||||| |||||||||||||| |||||    
T  15944 ttgtaccttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttg 16003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 61766 - 61854
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||| || ||| ||||||||    
T  61766 acactttgtactttgtcaactctcaatgaaggacaagcacccaatgcttttcaaacaaacgttggcaccttccctttagtatttcgctt 61854  T

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Target: scaffold0481 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 12713 - 12564
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgata-agttctgcttctgatgacgtcattacttcagaggca 234  Q
    |||||||| | |||||||||||||||||||| |  ||||||||||| | || ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  12713 agcttctggtgatgatatagcttctgatgaaatcttgcttctgatggatttctgcttctgatggacttctgcttctgatgacgtcattacttcagaggca 12614  T
Q  235 c-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    | ||  ||||||||| |||| ||   ||||||||||||||||||||||||    
T  12613 cttgttacttcagaaccactccatcgcttcagacgcagttttcttcagat 12564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 12866 - 12795
Alignment:
Q  6 ttgtactttgtcaactctgaataaagg-acaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  | | ||| ||||||||||| ||||||||||||||||||||| |||| |||||    
T  12866 ttgtactttgtcaactcttcaaagagggacaagcacccagtgcttttcaaatgaacgttggtacctcccttt 12795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 59161 - 59048
Alignment:
Q  173 gcttctgatgaact-ttgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgc 269  Q
    |||||||||||| | ||||| ||||| || ||||||||||||||||||||| |||||||||||||| | |||||||||||||||||| | ||||||||||    
T  59161 gcttctgatgaaatgttgctcctgatgaacttctgcttctgatgacgtcataacttcagaggcacttgtaacttcagaagcacttcatagcttcagacgc 59062  T
Q  270 agttttcttcagat 283  Q
    | ||||||||||||    
T  59061 aattttcttcagat 59048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 59333 - 59262
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  ||| | | | ||| ||||| |||||||||||||||||||||||| |||||||    
T  59333 ttgtactttgtcaactcttcaatgaggaaaaagaacccagtgcttttcaaatgaacgttggcactttccttt 59262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 11984 - 12063
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| ||||||||||||||    |||||| ||||||||||||||||||||||||||||||||||||    
T  11984 tgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttcaaaacttcagacgcagttttcttcagat 12063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 11794 - 11879
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttc 85  Q
    |||||||||||||||||||||||   | ||||||||||| || |||||||||||||||| ||||| |||||| | || ||||||||    
T  11794 acactttgtactttgtcaactctctttgaaggacaagcatcccatgcttttcaaatgaatcgttgccacctttcctttagtctttc 11879  T

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Target: scaffold0201 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 283
Target Start/End: Original strand, 7586 - 7745
Alignment:
Q  127 ctgatcgattgaagcttctgataatgatatagcttctgatgaagt--tgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcatt 222  Q
    |||||| |||| |||||||| | |||||||||||||||||||| |  ||||||||||| |||| |||||||||| |  |||||||||| ||||||||||     
T  7586 ctgatcaattgtagcttctggtgatgatatagcttctgatgaaatattgcttctgatggacttctgcttctgatgatcttctgcttctaatgacgtcatc 7685  T
Q  223 acttcagaggcac-tgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||| ||  | |||||||||||||   | ||||||||||||||||||||||||    
T  7686 acttcagaggcacttgttagttcagaagcactt--tagcttcagacgcagttttcttcagat 7745  T

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Target: scaffold0201; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 7108 - 7188
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||||||||||||||| |||||  | ||||||||||||||   | ||||||||||||||||||| ||||    
T  7108 ttctgcttctgatgacgtcattacttcagaagcactccagcttcagaagcactt--tagcttcagacgcagttttctttagat 7188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 7445 - 7505
Alignment:
Q  6 ttgtactttgtcaactctgaataa--aggacaagcacccaatgcttttcaaatgaacgttg 64  Q
    ||||||||||||||||||||  ||  |||||||||||||| |||||||||||||| |||||    
T  7445 ttgtactttgtcaactctgataaagaaggacaagcacccagtgcttttcaaatgaccgttg 7505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 283
Target Start/End: Original strand, 58718 - 58801
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||||||||||||| | |||||||||||||||| | | ||||||||||||||||||||||||    
T  58718 ttctgcttctgatgacgtcatcacttcagaggcacttgtaacttcagaagcactttatatcttcagacgcagttttcttcagat 58801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 58516 - 58579
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    ||||||||||||||||||  ||| | | ||||||||||| ||||||||||||||||||||||||    
T  58516 ttgtactttgtcaactcttcaatgaggaacaagcacccagtgcttttcaaatgaacgttggcac 58579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 58642 - 58699
Alignment:
Q  112 ttcagattgaatctgctgatcgattgaagcttctgataatgatatagcttctgatgaa 169  Q
    |||||||||||||| |||||| | || |||||||| | |||||||||| |||||||||    
T  58642 ttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcatctgatgaa 58699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 61259 - 61342
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttcctttgagtctttcgct 88  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  61259 ttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttctaatgaacgttggcaccttccttttagtctttcgct 61342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 283
Target Start/End: Complemental strand, 35056 - 34899
Alignment:
Q  129 gatcgattgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcatta 223  Q
    |||| |||| |||||||| | ||||| | ||||||||||||    ||||||||||||| | | |||||||||| || ||||||||||||||||||||| |    
T  35056 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccatctgcttctgatgagcttctgcttctgatgacgtcatca 34957  T
Q  224 cttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  34956 cttcagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 34899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 134 - 283
Target Start/End: Complemental strand, 32796 - 32644
Alignment:
Q  134 attgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataagtt-ctgcttctgatgacgtcattacttca 228  Q
    |||| |||||||| | ||||| | ||||||||||||    ||||||||||||| ||| |||||||||| |||| ||||||||||||||||||| ||||||    
T  32796 attgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgagtttctgcttctgatgacgtcatcacttca 32697  T
Q  229 gaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||  | || |||||||||||   | ||||||||||||||||||||||||    
T  32696 gaggcacttcatctgcagaagcactt--tagcttcagacgcagttttcttcagat 32644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 40290 - 40255
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  40290 ttctgcttctgatgacgtcattacttcagaagcact 40255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 1048 - 1128
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||| ||||||| | ||||||||||||||||||||||||    
T  1048 tgcttctgatgacttcattacttcagaggcacttgacacttcagaaacacttcatagcttcagacgcagttttcttcagat 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 5428 - 5508
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcact-gaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||| ||||||| | ||||||||||||||||||||||||    
T  5428 tgcttctgatgacttcattacttcagaggcacttgacacttcagaaacacttcatagcttcagacgcagttttcttcagat 5508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 861 - 932
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  ||| |||||||||||| || |||||||||||||||||||| ||||| |||||    
T  861 ttgtactttgtcaactcttcaatgaaggacaagcacacagtgcttttcaaatgaacgttgacacctcccttt 932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 5241 - 5312
Alignment:
Q  6 ttgtactttgtcaactctg-aataaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttt 76  Q
    ||||||||||||||||||  ||| |||||||||||| || |||||||||||||||||||| ||||| |||||    
T  5241 ttgtactttgtcaactcttcaatgaaggacaagcacacagtgcttttcaaatgaacgttgacacctcccttt 5312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 19070 - 18958
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| |||||||| | || |||||||||||||||||||||||||||||| |||||  | ||||||||||||||   | |||||||||    
T  19070 ttgcttctgatgaccttctgcttctggtgagcttctgcttctgatgacgtcattacttcagaagcacttcagcttcagaagcactt--tagcttcagacg 18973  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  18972 cagttttcttcagat 18958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 28464 - 28352
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| |||||||| | || |||||||||||||||||||||||||||||| |||||  | ||||||||||||||   | |||||||||    
T  28464 ttgcttctgatgaccttctgcttctggtgagcttctgcttctgatgacgtcattacttcagaagcacttcagcttcagaagcactt--tagcttcagacg 28367  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  28366 cagttttcttcagat 28352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 343 - 455
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| ||||| |||| || ||||||||||||||||||||| ||||||||||||||  | ||||||||||||||   |||||||||||    
T  343 ttgcttctgatgaccttctgcttttgatgagcttctgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagcactt--taacttcagacg 440  T
Q  269 cagttttcttcagat 283  Q
    || ||||||||||||    
T  441 caattttcttcagat 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 20264 - 20185
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||||||||||||||||||    |||||| ||||||||| ||||||||||| ||||||||||||||    
T  20264 tgcttctgatgacgtcattacttcagaggcactttgtcttcaggagcacttcataacttcagacgtagttttcttcagat 20185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20454 - 20395
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaac 60  Q
    |||||||||||||||||||||||   | ||||||||||| ||||||  ||||||||||||    
T  20454 acactttgtactttgtcaactctctttgaaggacaagcatccaatgtctttcaaatgaac 20395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 283
Target Start/End: Complemental strand, 36632 - 36475
Alignment:
Q  129 gatcgattgaagcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcatta 223  Q
    |||| |||| |||||||| | ||||| | ||||||||||||    ||||||||||||| | | ||||| |||| || ||||||||||||||||||||| |    
T  36632 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccatatgcttttgatgagcttctgcttctgatgacgtcatca 36533  T
Q  224 cttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  36532 cttcagaggcactttagcttcagaagcactt--tagcttcagacgcagttttcttcagat 36475  T

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Target: scaffold0655 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5151 - 5240
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatga-acgttggcaccttcctttgagtctttcgctt 89  Q
    |||||||||||||||||||| || | | ||||||||||||||||||||||||||||||  ||||| |||||||| || ||||||||||||    
T  5151 acactttgtactttgtcaacactcattgaaggacaagcacccaatgcttttcaaatgagtcgttgccaccttccctttagtctttcgctt 5240  T

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Target: scaffold0414 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 283
Target Start/End: Original strand, 2709 - 2803
Alignment:
Q  188 tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  2709 tgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 2803  T

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Target: scaffold0414; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 7042 - 6936
Alignment:
Q  173 gcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagt 272  Q
    ||||||||||||||| |||||||||||  | |||||||||||||||||| |||||||  |||||    |||||| |||||||   ||||||||  |||||    
T  7042 gcttctgatgaactt-gcttctgataacat-tgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcactt-ttaacttcaggagcagt 6946  T
Q  273 tttcttcaga 282  Q
    ||||||||||    
T  6945 tttcttcaga 6936  T

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Target: scaffold1204 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 2254 - 2174
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| ||||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  2254 ttctgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 2174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 2089 - 1976
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| |||||||||| || ||||||||||||||||||||| |||||||| |||||  | |||||| |||||||  || |||||||||    
T  2089 ttgcttctgatgagcttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcagcttcaggagcactt-taagcttcagacg 1991  T
Q  269 cagttttcttcagat 283  Q
     ||||||||||||||    
T  1990 tagttttcttcagat 1976  T

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Target: scaffold1477 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1477
Description:

Target: scaffold1477; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 283
Target Start/End: Complemental strand, 1528 - 1434
Alignment:
Q  188 tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||| || || ||||||||||||||||||||||||||| |||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  1528 tgcttctgatgagcttatgcttctgatgacgtcattacttcagaagcactccagcttcagaagcactt--tagcttcagacgcagttttcttcagat 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 283
Target Start/End: Original strand, 11583 - 11709
Alignment:
Q  155 atagcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcactt 254  Q
    ||||||| ||||||| |||||| |||||||||| ||||||||| |  |  |||||||||||||||||||||||||| |||||    |||||| |||||||    
T  11583 atagcttatgatgaacttgcttttgatgaactt-gcttctgatgaacta-gcttctgatgacgtcattacttcagaagcactttgtcttcaggagcactt 11680  T
Q  255 caaaacttcagacgcag-ttttcttcagat 283  Q
    | ||||||||||||||| ||||||||||||    
T  11681 c-aaacttcagacgcagtttttcttcagat 11709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 156703 - 156614
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||||||| | | |||||||||||||||| ||| |||||||||| ||||| |||||| | || ||||||||||||    
T  156703 acactttgtactttgtcaactctcattgaaggacaagcacccaaagctattcaaatgaatcgttgccacctttcctttagtctttcgctt 156614  T

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Target: scaffold0002; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 481847 - 481758
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaac-gttggcaccttcctttgagtctttcgctt 89  Q
    ||||||||||||||||||||||| | | | ||||||||||||||||||||||||||||||  ||| |||||| | || ||||||||||||    
T  481847 acactttgtactttgtcaactctcattgagggacaagcacccaatgcttttcaaatgaacttttgccacctttcctttagtctttcgctt 481758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 347484 - 347428
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaa 257  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  347484 ttctgcttctgatgacgtcatcacttcagaagcacttcaacttcagaagcacttcaa 347428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 117502 - 117614
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||| ||| ||||||||||  | ||||||||||||||||||||| ||||||||||||||  | |||||||||  |||   | |||||||||    
T  117502 ttgcttctgatgaccttctgcttctgatgggcttctgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagtgctt--tagcttcagacg 117599  T
Q  269 cagttttcttcagat 283  Q
    ||| |||||||||||    
T  117600 cagctttcttcagat 117614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2108 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold2108
Description:

Target: scaffold2108; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 283
Target Start/End: Original strand, 2 - 97
Alignment:
Q  188 tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||| || |||||||||||||||||||||  ||||||| |||||  |||||||| |||||||| || |||||||| |||||||||||||||    
T  2 tgcttctgatgagcttctgcttctgatgacgtcatctcttcagatgcacttcaacttcaggagcacttc-aagcttcagacacagttttcttcagat 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 283
Target Start/End: Complemental strand, 10452 - 10375
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| ||||||||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  10452 tgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 10375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 7591 - 7511
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| |||| |||||||||  | ||||||||||||||   | ||||||||||||||||||||||||    
T  7591 ttctgcttctgatgacgtcatcactttagaggcacttcagcttcagaagcactt--tagcttcagacgcagttttcttcagat 7511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 9758 - 9695
Alignment:
Q  186 tttgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcac-tgaaacttcaga 247  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9758 tttgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgaaacttcaga 9695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 13154 - 13042
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||  ||| |||||||||| || ||||||||||||||||||||| |||||| | |||||  | ||||||||||||||   | |||||||||    
T  13154 ttgcttctgatggtcttctgcttctgatgagcttctgcttctgatgacgtcatcacttcataagcactctagcttcagaagcactt--tagcttcagacg 13057  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  13056 cagttttcttcagat 13042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 13459 - 13347
Alignment:
Q  171 ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacg 268  Q
    ||||||||||||  ||| |||||||||| || ||||||||||||||||||||| |||||| | |||||  | ||||||||||||||   | |||||||||    
T  13459 ttgcttctgatggtcttctgcttctgatgagcttctgcttctgatgacgtcatcacttcaaaagcactccagcttcagaagcactt--tagcttcagacg 13362  T
Q  269 cagttttcttcagat 283  Q
    |||||||||||||||    
T  13361 cagttttcttcagat 13347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 6040 - 5959
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||||||| ||||||||||||||  | |||||| |||||||  || |||||||||| |||||||||||||    
T  6040 ttctgcttctgatgacgtcatcacttcagaggcacttcagcttcaggagcactt-taagcttcagacgcggttttcttcagat 5959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1321 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 1012 - 924
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgct 88  Q
    |||||| ||||||||||||||||   | | ||||||||||||||||||||||||||||| ||||| |||||| | || |||||||||||    
T  1012 acacttcgtactttgtcaactctctttgatggacaagcacccaatgcttttcaaatgaaccgttgccacctttcctttagtctttcgct 924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1263 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 1205 - 1117
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgct 88  Q
    |||||| ||||||||||||||||   | | ||||||||||||||||||||||||||||| ||||| |||||| | || |||||||||||    
T  1205 acacttcgtactttgtcaactctctttgatggacaagcacccaatgcttttcaaatgaaccgttgccacctttcctttagtctttcgct 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 5013 - 5090
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||| ||||||||||||||  | ||||||||||||||   | ||||||| ||||||||||||||||    
T  5013 tgcttctgatgacgtcatcacttcagaggcacttcagcttcagaagcactt--tagcttcagatgcagttttcttcagat 5090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6599 - 6511
Alignment:
Q  1 acactttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaatgaa-cgttggcaccttcctttgagtctttcgct 88  Q
    |||||| ||||||||||||||||   | | ||||||||||||||||||||||||||||| ||||| |||||| | || |||||||||||    
T  6599 acacttcgtactttgtcaactctctttgatggacaagcacccaatgcttttcaaatgaaccgttgccacctttcctttagtctttcgct 6511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 42408 - 42260
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtcattacttcagaggc 233  Q
    |||||||| | ||||||| ||||||||||||    ||||||||||||| ||| |||||||||| || |||||||||||||| | |||| | ||||||  |    
T  42408 agcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgagcttctgcttctgatgccttcatcatttcagatac 42309  T
Q  234 actgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||  | |||||| ||||||| ||  ||||||||||||||||||||||||    
T  42308 acttcagcttcaggagcactttaag-cttcagacgcagttttcttcagat 42260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 35456 - 35518
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcaga 266  Q
    |||||||||||||||||| ||||||||||||||    |||||| |||||||||||||||||||    
T  35456 tgcttctgatgacgtcatcacttcagaggcactttgtcttcaggagcacttcaaaacttcaga 35518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 7628 - 7704
Alignment:
Q  206 cttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||| ||||||||||||| ||||||||    |||||  ||||||||||| ||||||||||||||||||||||||    
T  7628 cttctgataacgtcattacttcggaggcactttgtcttcaagagcacttcaaa-cttcagacgcagttttcttcagat 7704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 25563 - 25522
Alignment:
Q  155 atagcttctgatgaagttgcttctgatgaactttgcttctgat 197  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  25563 atagcttctgatgaagttgcttctgatgaac-ttgcttctgat 25522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 3203 - 3268
Alignment:
Q  187 ttgcttctgat-aagttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagca 251  Q
    ||||||||||| || ||||||||||||||||||||| |||||||| |||||  |||||||| ||||    
T  3203 ttgcttctgatgaacttctgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagca 3268  T

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Target: scaffold0570 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 1747 - 1694
Alignment:
Q  3 actttgtactttgtcaactctgaataaaggacaagcacccaatgcttttcaaat 56  Q
    |||| ||||||||||||||||   | ||||||||||||||||||||||||||||    
T  1747 acttcgtactttgtcaactctttttgaaggacaagcacccaatgcttttcaaat 1694  T

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Target: scaffold0570; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 1507 - 1470
Alignment:
Q  241 cttcagaagcacttcaaaacttcagacgcagttttctt 278  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  1507 cttcaggagcacttcataacttcagacgcagttttctt 1470  T

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Target: scaffold0570; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 1565 - 1524
Alignment:
Q  157 agcttctgatgaagtt-gcttctgatgaactttgcttctgat 197  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  1565 agcttctgatgaactttgcttctgatgaactttgcttctgat 1524  T

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Target: scaffold0314 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 20611 - 20558
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcactt 254  Q
    ||||||||||||||||||||| |||||||| |||||  | ||||||||||||||    
T  20611 ttctgcttctgatgacgtcatcacttcagaagcacttcagcttcagaagcactt 20558  T

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Target: scaffold0314; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 283
Target Start/End: Complemental strand, 20571 - 20514
Alignment:
Q  224 cttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||| |||||  | ||||||||||||||||   ||||||||||||||||||||||||    
T  20571 cttcagaagcactttagcttcagaagcacttcag--cttcagacgcagttttcttcagat 20514  T

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Target: scaffold0069 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 282
Target Start/End: Complemental strand, 5219 - 5142
Alignment:
Q  205 gcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    ||||||||||||||||| |||||||| |||||    |||||| ||||||||||||||| ||  |||||||||| ||||    
T  5219 gcttctgatgacgtcatcacttcagaagcactttgtcttcaggagcacttcaaaactttaggagcagttttctacaga 5142  T

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Target: scaffold0471 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 3528 - 3598
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcag 229  Q
    |||||||||| || ||||||||||||||| ||||||||||| |  | |||||||||||||||||| |||||||    
T  3528 agcttctgataaacttgcttctgatgaac-ttgcttctgatgacct-tgcttctgatgacgtcatcacttcag 3598  T

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Target: scaffold0217 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 22018 - 21948
Alignment:
Q  157 agcttctgatgaagttgcttctgatgaactttgcttctgataagttctgcttctgatgacgtcattacttcag 229  Q
    |||||||||| || ||||||||||||||| ||||||||||| |  | |||||||||||||||||| |||||||    
T  22018 agcttctgataaacttgcttctgatgaac-ttgcttctgatgacct-tgcttctgatgacgtcatcacttcag 21948  T

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Target: scaffold0083 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 53435 - 53483
Alignment:
Q  183 aactttgcttctgat-aagttctgcttctgatgacgtcattacttcaga 230  Q
    ||||||||||||||| || ||||||||||||||||||||| ||||||||    
T  53435 aactttgcttctgatgaacttctgcttctgatgacgtcatcacttcaga 53483  T

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Target: scaffold0028 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 14950 - 15038
Alignment:
Q  155 atagcttctgatgaag---ttgcttctgatgaa---ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||| |||||   ||||||||||||||   ||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  14950 atagcttctggtgaagatattgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 15038  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 28810 - 28774
Alignment:
Q  32 gacaagcacccaatgcttttcaaatgaacgttggcac 68  Q
    |||||||||||| ||||||||||||||||||||||||    
T  28810 gacaagcacccagtgcttttcaaatgaacgttggcac 28774  T

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Target: scaffold1102 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 2877 - 2834
Alignment:
Q  240 acttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    ||||||||||||||||  | ||||||||||||||||||||||||    
T  2877 acttcagaagcacttcttagcttcagacgcagttttcttcagat 2834  T

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Target: scaffold0386 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 12775 - 12810
Alignment:
Q  201 ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    |||||||||||||||||||||||||||||| |||||    
T  12775 ttctgcttctgatgacgtcattacttcagaagcact 12810  T

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Target: scaffold0334 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 19664 - 19595
Alignment:
Q  171 ttgcttctgatgaa---ctttgcttctgataag-ttctgcttctgatgacgtcattacttcagaggcact 236  Q
    ||||||||||||||   ||||||||||||| |  ||||||||||||||||||||| |||||||| |||||    
T  19664 ttgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact 19595  T

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Target: scaffold0527 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 107 - 184
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    |||||||||||||||||| |||||||  |||||    |||||| |||||||| |||||||||  |||||||||||||||    
T  107 tgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcacttc-aaacttcaggagcagttttcttcaga 184  T

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Target: scaffold0527; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 8170 - 8247
Alignment:
Q  204 tgcttctgatgacgtcattacttcagaggcactgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 282  Q
    |||||||||||||||||| |||||||  |||||    |||||| |||||||| |||||||||  |||||||||||||||    
T  8170 tgcttctgatgacgtcatcacttcaggagcactttgtcttcaggagcacttc-aaacttcaggagcagttttcttcaga 8247  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 51989 - 51869
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag--ttgcttctgatgaactt-tgcttctgataag-ttctgcttctgatgacgtca-ttacttcagaggc 233  Q
    |||||||| | ||||| | ||||||||||||   |||||||||||| |||| ||||||||||  | |||| ||||||||||||||| |||||| ||| ||    
T  51989 agcttctggtgatgatttcgcttctgatgaaaccttgcttctgatggacttctgcttctgatgggcttctacttctgatgacgtcatttactttagaagc 51890  T
Q  234 actgaaacttcagaagcactt 254  Q
    |||  | ||||||||||||||    
T  51889 acttcagcttcagaagcactt 51869  T

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Target: scaffold0099 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 19623 - 19721
Alignment:
Q  139 agcttctgataatgatatagcttctgatgaag---ttgcttctgatga-actt-tgcttctgataagtt--ctgcttctgatgacgtcattacttcaga 230  Q
    |||||||| | ||||||| ||||||||||||    ||||||||||||| |||| |||||||||| || |  ||||||||||||||||||| ||||||||    
T  19623 agcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagacttctgcttctgatgagcttactgcttctgatgacgtcatcacttcaga 19721  T

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Target: scaffold0178 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 27179 - 27220
Alignment:
Q  240 acttcagaagcacttcaaaacttcagacgcagttttcttcagat 283  Q
    |||||||||||||||||   ||||||||||||||||||||||||    
T  27179 acttcagaagcacttcag--cttcagacgcagttttcttcagat 27220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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