View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11809_high_56 (Length: 275)
Name: NF11809_high_56
Description: NF11809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11809_high_56 |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 40467286 - 40467543
Alignment:
| Q |
1 |
ccctatcttgttccacccatattgttctttcttgcttgaaaaaattgtcaaatcctaaaatcctaaaggaatggaaactagctactaaactataggtatc |
100 |
Q |
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| T |
40467286 |
ccctatcttgttccacccatattgttcgttcttgcttgaaaaaattgtcaaatcctaaaatcctaaaggaatggaaactagctactaaactataggtatc |
40467385 |
T |
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| Q |
101 |
tttcatttaggttgacttgtttatgccatccaccaactcttatctttctctctctacctgacactgttcattataattctgaaaaaccatgatgatatac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40467386 |
tttcatttaggttgacttgtttatgccatccaccaactcttatctttctctctctacctgacactgttcattataattctgaaaaaccatgatgatatac |
40467485 |
T |
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| Q |
201 |
tatcatataagacattctacctttaatcacacaccacgacacacactagtgcatttgc |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40467486 |
tatcatataagacattctacctttaatcacacaccacgacacacactagtgcatttgc |
40467543 |
T |
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