View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11809_high_86 (Length: 241)

Name: NF11809_high_86
Description: NF11809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11809_high_86
NF11809_high_86
[»] chr3 (39 HSPs)
chr3 (1-223)||(54635233-54635455)
chr3 (1-223)||(45283095-45283318)
chr3 (1-223)||(6716608-6716832)
chr3 (1-223)||(25637536-25637763)
chr3 (1-223)||(3617559-3617783)
chr3 (1-223)||(7779843-7780063)
chr3 (1-223)||(4598358-4598582)
chr3 (1-223)||(4600579-4600803)
chr3 (41-223)||(801201-801379)
chr3 (1-223)||(10211504-10211728)
chr3 (1-223)||(10209284-10209508)
chr3 (45-222)||(23200020-23200196)
chr3 (1-223)||(10056328-10056552)
chr3 (1-223)||(10058550-10058774)
chr3 (1-223)||(10060772-10060996)
chr3 (1-223)||(10062994-10063218)
chr3 (1-223)||(10065216-10065440)
chr3 (47-222)||(23197823-23197997)
chr3 (1-203)||(10067435-10067639)
chr3 (48-211)||(19683774-19683936)
chr3 (46-223)||(5258028-5258203)
chr3 (48-223)||(9636010-9636185)
chr3 (52-223)||(37408567-37408737)
chr3 (45-223)||(5260206-5260382)
chr3 (48-211)||(9581403-9581565)
chr3 (48-210)||(7764586-7764747)
chr3 (48-211)||(7762386-7762548)
chr3 (48-211)||(45095284-45095445)
chr3 (157-210)||(43401794-43401847)
chr3 (157-210)||(43403737-43403790)
chr3 (160-211)||(34491333-34491383)
chr3 (157-210)||(49199462-49199515)
chr3 (164-211)||(4570073-4570120)
chr3 (164-211)||(6095600-6095646)
chr3 (48-90)||(9634707-9634750)
chr3 (48-90)||(29811107-29811150)
chr3 (157-211)||(40913414-40913467)
chr3 (50-90)||(51399053-51399094)
chr3 (48-133)||(5236343-5236431)
[»] chr8 (25 HSPs)
chr8 (1-223)||(3439612-3439832)
chr8 (1-223)||(25690063-25690286)
chr8 (1-223)||(42575160-42575383)
chr8 (1-223)||(15290633-15290857)
chr8 (1-223)||(15471002-15471226)
chr8 (1-223)||(2627845-2628065)
chr8 (46-217)||(31218372-31218541)
chr8 (48-211)||(42498315-42498477)
chr8 (48-223)||(17982762-17982935)
chr8 (46-223)||(19945243-19945418)
chr8 (48-211)||(34254217-34254378)
chr8 (48-211)||(34256393-34256554)
chr8 (48-223)||(44303964-44304137)
chr8 (48-223)||(1746105-1746278)
chr8 (164-211)||(42434992-42435038)
chr8 (48-223)||(27811387-27811560)
chr8 (48-211)||(33352271-33352432)
chr8 (160-223)||(1345368-1345430)
chr8 (160-223)||(3303667-3303729)
chr8 (164-211)||(18655521-18655567)
chr8 (48-90)||(30143579-30143622)
chr8 (160-211)||(43036544-43036594)
chr8 (164-209)||(11384108-11384152)
chr8 (52-133)||(4731852-4731936)
chr8 (71-107)||(32902096-32902132)
[»] chr1 (28 HSPs)
chr1 (1-223)||(40282486-40282708)
chr1 (1-223)||(20622075-20622296)
chr1 (1-223)||(9987310-9987530)
chr1 (1-223)||(21054067-21054286)
chr1 (1-223)||(9036525-9036748)
chr1 (1-223)||(44203741-44203965)
chr1 (45-223)||(51765506-51765684)
chr1 (46-223)||(13316236-13316411)
chr1 (48-211)||(8550670-8550834)
chr1 (48-211)||(20762793-20762950)
chr1 (70-211)||(3189451-3189590)
chr1 (70-211)||(3198268-3198407)
chr1 (70-211)||(3207107-3207246)
chr1 (157-223)||(42297968-42298034)
chr1 (164-211)||(29136368-29136415)
chr1 (48-211)||(3156986-3157147)
chr1 (164-211)||(13547090-13547136)
chr1 (164-211)||(13549001-13549047)
chr1 (164-211)||(37168419-37168465)
chr1 (164-211)||(11348819-11348865)
chr1 (164-211)||(28242425-28242472)
chr1 (168-223)||(34603686-34603740)
chr1 (164-211)||(47255340-47255387)
chr1 (160-210)||(37033068-37033118)
chr1 (160-209)||(834164-834212)
chr1 (52-107)||(44455381-44455438)
chr1 (48-87)||(10925464-10925504)
chr1 (48-133)||(49918544-49918632)
[»] chr5 (28 HSPs)
chr5 (2-223)||(29720473-29720693)
chr5 (2-223)||(29722633-29722853)
chr5 (1-223)||(29750997-29751219)
chr5 (1-223)||(10593367-10593591)
chr5 (1-216)||(22536130-22536342)
chr5 (1-223)||(25078230-25078454)
chr5 (1-223)||(25136199-25136423)
chr5 (1-223)||(9789064-9789283)
chr5 (1-223)||(18441484-18441707)
chr5 (1-223)||(40380200-40380424)
chr5 (1-223)||(40382411-40382635)
chr5 (1-223)||(16409584-16409805)
chr5 (1-223)||(16544518-16544744)
chr5 (1-223)||(26177991-26178212)
chr5 (1-223)||(16546740-16546966)
chr5 (41-223)||(26170871-26171055)
chr5 (46-223)||(30182697-30182872)
chr5 (46-223)||(13343169-13343344)
chr5 (46-223)||(36073927-36074102)
chr5 (48-211)||(25412881-25413042)
chr5 (65-211)||(13239872-13240016)
chr5 (160-211)||(37439262-37439313)
chr5 (164-211)||(213586-213633)
chr5 (162-211)||(28278437-28278485)
chr5 (48-133)||(30682809-30682897)
chr5 (164-211)||(40147382-40147428)
chr5 (65-211)||(32636945-32637088)
chr5 (164-211)||(5058166-5058212)
[»] chr7 (30 HSPs)
chr7 (1-223)||(20344006-20344228)
chr7 (1-223)||(18388595-18388819)
chr7 (1-223)||(18392031-18392255)
chr7 (1-223)||(6594393-6594617)
chr7 (1-223)||(1560500-1560725)
chr7 (1-223)||(6592175-6592399)
chr7 (1-223)||(32060157-32060381)
chr7 (1-222)||(43503994-43504212)
chr7 (45-223)||(39731478-39731656)
chr7 (98-223)||(24789950-24790075)
chr7 (52-223)||(35854023-35854194)
chr7 (1-103)||(24790230-24790330)
chr7 (48-211)||(23555161-23555323)
chr7 (49-223)||(4178882-4179054)
chr7 (47-223)||(25766842-25767019)
chr7 (48-211)||(25615974-25616137)
chr7 (48-211)||(29991174-29991335)
chr7 (45-223)||(48408913-48409092)
chr7 (160-211)||(34310712-34310763)
chr7 (65-211)||(19502299-19502443)
chr7 (52-211)||(27347938-27348095)
chr7 (164-211)||(22270094-22270140)
chr7 (164-211)||(32358055-32358101)
chr7 (164-211)||(48599335-48599381)
chr7 (157-211)||(2390403-2390456)
chr7 (50-211)||(48489552-48489711)
chr7 (48-133)||(43864438-43864526)
chr7 (164-211)||(3259116-3259162)
chr7 (164-211)||(8359316-8359363)
chr7 (48-211)||(18126765-18126928)
[»] chr6 (35 HSPs)
chr6 (1-223)||(27647969-27648184)
chr6 (1-223)||(16578355-16578577)
chr6 (1-223)||(16616803-16617025)
chr6 (1-223)||(16653221-16653443)
chr6 (1-223)||(16554978-16555200)
chr6 (1-223)||(16631534-16631756)
chr6 (1-223)||(25421415-25421639)
chr6 (1-223)||(6027356-6027579)
chr6 (1-223)||(6097289-6097510)
chr6 (1-223)||(34167189-34167413)
chr6 (65-217)||(412217-412369)
chr6 (1-223)||(13154024-13154248)
chr6 (1-223)||(33341938-33342164)
chr6 (1-222)||(3072599-3072817)
chr6 (1-223)||(34164967-34165191)
chr6 (1-223)||(2171369-2171591)
chr6 (48-223)||(16452214-16452388)
chr6 (46-223)||(30834418-30834595)
chr6 (48-211)||(5408956-5409116)
chr6 (48-211)||(5413281-5413441)
chr6 (48-211)||(31404561-31404722)
chr6 (1-78)||(6136138-6136216)
chr6 (70-211)||(5406109-5406247)
chr6 (70-211)||(5410434-5410572)
chr6 (157-211)||(3808701-3808755)
chr6 (65-211)||(33160254-33160399)
chr6 (164-211)||(17763111-17763158)
chr6 (164-211)||(21589052-21589098)
chr6 (164-211)||(21593785-21593831)
chr6 (1-39)||(13159066-13159104)
chr6 (48-211)||(9182917-9183078)
chr6 (160-211)||(16569143-16569193)
chr6 (160-211)||(33211182-33211232)
chr6 (1-45)||(412371-412415)
chr6 (164-224)||(5043735-5043795)
[»] chr2 (19 HSPs)
chr2 (1-223)||(6266800-6267020)
chr2 (1-223)||(12647221-12647445)
chr2 (1-223)||(13655864-13656091)
chr2 (1-211)||(32289685-32289894)
chr2 (40-223)||(30833455-30833638)
chr2 (45-223)||(4484211-4484389)
chr2 (46-223)||(4503017-4503192)
chr2 (48-223)||(45099863-45100036)
chr2 (48-211)||(36987961-36988123)
chr2 (48-223)||(36205551-36205724)
chr2 (48-211)||(6594890-6595053)
chr2 (52-211)||(5723146-5723303)
chr2 (160-211)||(2334414-2334465)
chr2 (48-211)||(17057255-17057416)
chr2 (48-211)||(17085238-17085399)
chr2 (164-211)||(45727050-45727096)
chr2 (164-208)||(35446885-35446928)
chr2 (166-211)||(1631735-1631779)
chr2 (48-133)||(38312434-38312522)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-223)||(2439-2663)
[»] chr4 (21 HSPs)
chr4 (1-223)||(8395712-8395937)
chr4 (1-223)||(8393503-8393728)
chr4 (1-223)||(7125011-7125235)
chr4 (1-223)||(31495146-31495375)
chr4 (1-223)||(7122792-7123016)
chr4 (1-223)||(5136174-5136399)
chr4 (1-223)||(5138399-5138624)
chr4 (45-223)||(13992174-13992352)
chr4 (48-211)||(5369968-5370130)
chr4 (48-211)||(56178522-56178684)
chr4 (48-211)||(48143164-48143330)
chr4 (70-211)||(29999719-29999853)
chr4 (157-210)||(2209836-2209889)
chr4 (48-211)||(52095248-52095409)
chr4 (48-208)||(52082549-52082708)
chr4 (157-211)||(50262694-50262748)
chr4 (167-211)||(41964537-41964580)
chr4 (164-211)||(8648260-8648306)
chr4 (164-211)||(41639547-41639593)
chr4 (164-211)||(50673848-50673894)
chr4 (52-133)||(34570304-34570388)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-223)||(3561-3785)
[»] scaffold0137 (1 HSPs)
scaffold0137 (4-223)||(6382-6605)
[»] scaffold1808 (1 HSPs)
scaffold1808 (1-193)||(4-198)
[»] scaffold0491 (2 HSPs)
scaffold0491 (45-223)||(11042-11220)
scaffold0491 (45-223)||(8616-8794)
[»] scaffold0002 (1 HSPs)
scaffold0002 (52-223)||(434642-434812)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-223)||(11666-11892)
[»] scaffold1519 (1 HSPs)
scaffold1519 (46-223)||(1024-1200)
[»] scaffold0016 (1 HSPs)
scaffold0016 (52-211)||(114723-114881)
[»] scaffold0066 (1 HSPs)
scaffold0066 (48-211)||(20301-20462)
[»] scaffold0236 (1 HSPs)
scaffold0236 (164-223)||(10598-10656)
[»] scaffold0176 (1 HSPs)
scaffold0176 (164-211)||(18004-18051)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 54635455 - 54635233
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54635455 atgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 54635356  T
Q  101 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctgg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  54635355 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctactctgg 54635256  T
Q  201 aggagagattgtactcttcaatc 223  Q
    ||||||| ||||||||| |||||    
T  54635255 aggagagtttgtactctccaatc 54635233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 45283318 - 45283095
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45283318 atgtgtggagcgacggagagcggtaaccaccaaacaaagtgtttgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaactagtgaga 45283219  T
Q  101 aacacaatacacaatcacaagataa--aaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  45283218 aacacaatacacaatcacaagataaacaaggagagggaagaagaaaacaaaagcacc-aagagattgttcactcagttcggtccaaacttgacctactct 45283120  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||||||||||||| |||||    
T  45283119 ggaggagagattgtactctccaatc 45283095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 6716832 - 6716608
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaac-aaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  6716832 atgtgtggagcaacggaaagcggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaaccaaaacaccacctagatctaatctaggaaacaagtgtg 6716733  T
Q  100 aaacacaatac-acaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
    |||| ||| |  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6716732 aaactcaaaaatacaatcacaagataaaaggggagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctactct 6716633  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||| ||||||||| |||||    
T  6716632 ggaggagagtttgtactctccaatc 6716608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 25637763 - 25637536
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||||| | |||||||||  || ||||||||||||||||||||||||||||||||||||||| |    
T  25637763 atgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgtgcaagcaggaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 25637664  T
Q  100 aaacacaataca--caatcacaagataaa--aggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgc 195  Q
    ||||||||  ||  |||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  25637663 aaacacaaagcaaacaatcacaagataaacaaggagagggaagaagaaaacaaaagcaccaaagagattggtcacccagttcggtccaaacttgacctac 25637564  T
Q  196 tctggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||||| |||||    
T  25637563 tctggaggagagattgtactctccaatc 25637536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 3617783 - 3617559
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||| | | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |    
T  3617783 atgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 3617684  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  3617683 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 3617585  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  3617584 tggaggagagattgtactctccaatc 3617559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 7779843 - 7780063
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaa-caccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||  ||||||||||||||||||| || |||||||||||||||||||||||||||||     
T  7779843 atgtgtggagcaaaggagagtggtaaccaccaa-caaagtgtgtg--caagcaataatcaacaaaaacagcacctagatctaatctaggaaacaagtgaa 7779939  T
Q  100 aaa-cacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
    ||| |||||||||||| |||||||||||||||||||||||| |||||||||  |||||| ||||||||||||||| || |||||||||||||||| ||||    
T  7779940 aaaacacaatacacaagcacaagataaaaggagagggaagaggaaaacaaagacaccaa-gagattgttcacccactttggtccaaacttgacctactct 7780038  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||||||| ||||| |||||    
T  7780039 ggaggagagattgaactctccaatc 7780063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 4598358 - 4598582
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||  | | | |||||||| || ||| ||||||||||||||||| ||||||||||||||||| |    
T  4598358 atgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaataaaacaccacctagatccaatctaggaaacaagtgtg 4598457  T
Q  100 aaacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||| |  | ||||||||||||||||  |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| ||    
T  4598458 aaacaaagca-acaatcacaagataaacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctact 4598555  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||| ||||||||| |||||    
T  4598556 ctggaggagagtttgtactctccaatc 4598582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 4600579 - 4600803
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||  | | | |||||| | || ||||||||||||||||||||| ||||||||||||||||| |    
T  4600579 atgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagccagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtg 4600678  T
Q  100 aaacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||| |||  ||||||||||||||||  |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| ||    
T  4600679 aaaca-aatcaacaatcacaagataaacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctact 4600776  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    || |||||||| ||||||||| |||||    
T  4600777 ctagaggagagtttgtactctccaatc 4600803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 41 - 223
Target Start/End: Complemental strand, 801379 - 801201
Alignment:
Q  41 gtgtgtgcaagcaataatcaacaaaacac--cacctagatctaatctaggaaacaagtg-agaaacacaatacacaatcacaagataaaaggagagggaa 137  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| | |||||||||||||||      |||||||||||||||||    
T  801379 gtgtgtgcaagcaataatcaacaaaaaacagcacctagatctaatctaggaaacaagtggaaaaacacaatacacaa------gataaaaggagagggaa 801286  T
Q  138 gaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  801285 gaagaaaacaaagacaccaa-gagattgttcacccagttcggtccaaacttgacctactctggaggagagattgtactctccaatc 801201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10211728 - 10211504
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||||| |||||  | | | |||||||| || ||||||||||||||||||||| ||||||||||||||||| |    
T  10211728 atgtgtggagcgacggagagtggtaaccaccaatcaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtg 10211629  T
Q  100 aaacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||| |  | ||||||||||||||||  ||||||||||||| |||||||| || ||| |||||||||| ||||||||||||||||||||||||||| ||    
T  10211628 aaacaaagca-acaatcacaagataaacaaggagagggaagatgaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctact 10211531  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||| ||||||||| |||||    
T  10211530 ctggaggagagtttgtactctccaatc 10211504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10209508 - 10209284
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||| |||||||||||||||||||||| |||||  | | | |||||||| || ||||||||||||||||||||| ||||||||||||||||| |    
T  10209508 atgtgtggagtgacggagagtggtaaccaccaatcaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtg 10209409  T
Q  100 aaacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||| |  | ||||||||||||||||  ||||||||||||| |||||||| || ||| |||||||||| |||||||||| |||||||||||||||| ||    
T  10209408 aaacaaagca-acaatcacaagataaacaaggagagggaagatgaaaacaataaacac-aaagagattggtcacccagtttggtccaaacttgacctact 10209311  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||| ||||||||| |||||    
T  10209310 ctggaggagagtttgtactctccaatc 10209284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 23200020 - 23200196
Alignment:
Q  45 gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaag-tgagaaacacaatacacaatcacaagataaaaggagagggaagaagaa 143  Q
    |||||||||||||||||||| | | |||||||||||||||||||||||||  ||| ||||||||  ||||| || |||||||||||||||||||||||||    
T  23200020 gtgcaagcaataatcaacaataaaacacctagatctaatctaggaaacaaaatgaaaaacacaaaccacaagcataagataaaaggagagggaagaagaa 23200119  T
Q  144 aacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaat 222  Q
    ||||||  |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  23200120 aacaaagacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaat 23200196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10056552 - 10056328
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||||||| |||  | | | |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |    
T  10056552 atgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtg 10056454  T
Q  100 aaacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||| |  |   || |||||||||||  |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| ||    
T  10056453 aaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctact 10056355  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||| ||||||||| |||||    
T  10056354 ctggaggagagtttgtactctccaatc 10056328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10058774 - 10058550
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||||||| |||  | | | |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |    
T  10058774 atgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtg 10058676  T
Q  100 aaacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||| |  |   || |||||||||||  |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| ||    
T  10058675 aaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctact 10058577  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||| ||||||||| |||||    
T  10058576 ctggaggagagtttgtactctccaatc 10058550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10060996 - 10060772
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||||||| |||  | | | |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |    
T  10060996 atgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtg 10060898  T
Q  100 aaacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||| |  |   || |||||||||||  |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| ||    
T  10060897 aaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctact 10060799  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||| ||||||||| |||||    
T  10060798 ctggaggagagtttgtactctccaatc 10060772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10063218 - 10062994
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||||||| |||  | | | |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |    
T  10063218 atgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtg 10063120  T
Q  100 aaacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||| |  |   || |||||||||||  |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| ||    
T  10063119 aaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctact 10063021  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||| ||||||||| |||||    
T  10063020 ctggaggagagtttgtactctccaatc 10062994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10065440 - 10065216
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||||||| |||  | | | |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |    
T  10065440 atgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtg 10065342  T
Q  100 aaacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||| |  |   || |||||||||||  |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| ||    
T  10065341 aaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctact 10065243  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||| ||||||||| |||||    
T  10065242 ctggaggagagtttgtactctccaatc 10065216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 47 - 222
Target Start/End: Original strand, 23197823 - 23197997
Alignment:
Q  47 gcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaag-tgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    |||||||||||||||||| | | ||| |||||||||||||||||||||  ||| ||||||||  ||||| |||||||||||||||||| ||||| |||||    
T  23197823 gcaagcaataatcaacaataaaacacatagatctaatctaggaaacaaaatgaaaaacacaaaccacaagcacaagataaaaggagagagaagaggaaaa 23197922  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaat 222  Q
    ||||  |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  23197923 caaagacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaat 23197997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10067639 - 10067435
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||||||| |||  | | | |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |    
T  10067639 atgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtg 10067541  T
Q  100 aaacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||| |  |   || |||||||||||  |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| ||    
T  10067540 aaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctact 10067442  T
Q  197 ctggagg 203  Q
    |||||||    
T  10067441 ctggagg 10067435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 19683774 - 19683936
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaa-acaagtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| |||||||| || |||| || |||||||||||||||  ||||   ||    
T  19683774 caagcaataatcaacaataacagcacctagatctaatctaggaataaaagtgaaaaacacaaaaccacaagcaaaagataaaaggagag--aagagagaa 19683871  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  |||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  19683872 acaaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactatggaggagagattg 19683936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 5258028 - 5258203
Alignment:
Q  46 tgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaa 143  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| || |||||  ||||| || || ||||||||||||  ||||   |    
T  5258028 tgcaagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaccacaagcaaaatataaaaggagag--aagagaga 5258125  T
Q  144 aacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||||  |||||||||  ||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||| |||||    
T  5258126 aacaaacacaccaaaga--ttgttcaccaagttcggtccaaacttgacctactctggagaagagattgaactctccaatc 5258203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 223
Target Start/End: Original strand, 9636010 - 9636185
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| || || ||  ||||| |||||||||||||| ||| | |||   |||    
T  9636010 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcataaatcacaagcacaagataaaagg-gagagcagagagaaa 9636108  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||  |||| |||||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||| |||||    
T  9636109 caaacacacc-aagagattgttcacccagttcggttcaaacttgacctactttggaggagagattgaactctccaatc 9636185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 37408737 - 37408567
Alignment:
Q  52 caataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaaacaa 148  Q
    ||||||||||||| |||| ||||||||||||||||||||| ||| |||| || ||| | | ||||| || |||||||||||||||  ||||   ||||||    
T  37408737 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcactaaatcacaagcaaaagataaaaggagag--aagagagaaacaa 37408640  T
Q  149 aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |  |||||||||  |||||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||||    
T  37408639 acacaccaaaga--ttgttcacccagttcgatccaaacttgacctactctggaggagagattgatctcttcaatc 37408567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 45 - 223
Target Start/End: Original strand, 5260206 - 5260382
Alignment:
Q  45 gtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaaga 142  Q
    |||||||||||||||||||| |||| |||||||||||||| |||||| ||| |||| || |||||  ||||| || || ||||||||||||  ||||       
T  5260206 gtgcaagcaataatcaacaataacaacacctagatctaatttaggaatcaaagtgaaaagcacaaaccacaagcaaaatataaaaggagag--aagagag 5260303  T
Q  143 aaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||||||  |||||||||  ||||||||| ||||||||||||||||||||| || ||||| |||||||| ||||| |||||    
T  5260304 aaacaaacacaccaaaga--ttgttcaccaagttcggtccaaacttgacctactttggagaagagattgaactctccaatc 5260382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 9581565 - 9581403
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||| ||| |||| || ||||| || |||| ||||| ||||| ||||||  ||||   ||    
T  9581565 caagcaataatcaacaataacagcacctagatctaatctatgaatcaaagtgaaaagcacaaaaccacaagcacaaaataaagggagag--aagagagaa 9581468  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  || ||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9581467 acaaacacatcaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattg 9581403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 210
Target Start/End: Complemental strand, 7764747 - 7764586
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| |||||||||||||||| |||| ||| |||| || ||||| || |||| || |||||||||||||||  ||||   ||    
T  7764747 caagcaataatcaacaataacagcacctagatctaatcttggaatcaaagtgaaaagcacaaaaccacaaacaaaagataaaaggagag--aagagagaa 7764650  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagatt 210  Q
    |||||  |||||||||  ||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  7764649 acaaacacaccaaaga--ttgttcacccagttcggtctaaatttgacctactctggaggagagatt 7764586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 7762548 - 7762386
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    |||| |||||||||||| |||| |||||||||||||| |||||| ||| |||| || ||||| || |||| || |||||||||||||||  ||||   ||    
T  7762548 caagtaataatcaacaataacaacacctagatctaatttaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagag--aagagagaa 7762451  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  || || |||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7762450 acaaacacatcataga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattg 7762386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 45095445 - 45095284
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| ||| ||||||||||||| ||| ||| | |  ||||||||  ||||| || |||||||||||||||   |||   |||    
T  45095445 caagcaataatcaacaataacagcacatagatctaatctatgaatcaaagagtaaaacacaaaccacaagcaaaagataaaaggagagaatagag--aaa 45095348  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||  | |||||||  ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  45095347 caaatacgccaaaga--ttgttcacccagttcggtccaaacttgacctactctagaggagagattg 45095284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 43401794 - 43401847
Alignment:
Q  157 aagagattgttcacccagttcggtccaaacttgacctgctctggaggagagatt 210  Q
    |||||||||||||||||||||||||||| | |||||| ||||||||||||||||    
T  43401794 aagagattgttcacccagttcggtccaaccatgacctactctggaggagagatt 43401847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 43403737 - 43403790
Alignment:
Q  157 aagagattgttcacccagttcggtccaaacttgacctgctctggaggagagatt 210  Q
    |||||||||||||||||||||||||||| | |||||| ||||||||||||||||    
T  43403737 aagagattgttcacccagttcggtccaaccatgacctactctggaggagagatt 43403790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 34491383 - 34491333
Alignment:
Q  160 agattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  34491383 agattgttcacccagttcggtcc-aacttgacctactctggaggagagattg 34491333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 49199462 - 49199515
Alignment:
Q  157 aagagattgttcacccagttcggtccaaacttgacctgctctggaggagagatt 210  Q
    |||||||||||||||||||||||||||| | ||||||  |||||||||||||||    
T  49199462 aagagattgttcacccagttcggtccaaccatgacctagtctggaggagagatt 49199515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 4570120 - 4570073
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||| |||||||||||||||||||| |||| |||||||| ||||||||    
T  4570120 tgttgacccagttcggtccaaacttcacctactctggagtagagattg 4570073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 6095600 - 6095646
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  6095600 tgttcacacagttcggtccaa-cttgacctactctggaggagagattg 6095646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 9634707 - 9634750
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaa 90  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  9634707 caagcaataatcaacaataacagcacctagatctaatctaggaa 9634750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 29811150 - 29811107
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaa 90  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  29811150 caagcaataatcaacaataacagcacctagatctaatctaggaa 29811107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 40913467 - 40913414
Alignment:
Q  157 aagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||| |||||||||||||| ||||||||||  ||||| ||||||||||    
T  40913467 aagagattgttgacccagttcggtcc-aacttgacctaatctgggggagagattg 40913414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 51399094 - 51399053
Alignment:
Q  50 agcaataatcaacaa-aacaccacctagatctaatctaggaa 90  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  51399094 agcaataatcaacaataacagcacctagatctaatctaggaa 51399053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 5236343 - 5236431
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacac-aatacacaatcacaagataaaaggagag 133  Q
    ||||||||||||||||| || | | ||||||||||||||||||| | |||||| || ||| ||| ||||| || |||||||||||||||    
T  5236343 caagcaataatcaacaataagagctcctagatctaatctaggaatcaaagtgaaaagcacaaatccacaagcaaaagataaaaggagag 5236431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 3439832 - 3439612
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3439832 atgtgtggagcgacggagagcggtaaccaccaaacaaagtgtgtg--caagcaacaatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 3439735  T
Q  101 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctgg 200  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  3439734 aactcaaaacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcatccagttcggtccaaacttgacctactctgg 3439635  T
Q  201 aggagagattgtactcttcaatc 223  Q
    ||||||||||||||||| |||||    
T  3439634 aggagagattgtactctccaatc 3439612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 25690286 - 25690063
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25690286 atgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaagaatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 25690187  T
Q  101 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctg 199  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  25690186 aacacaaaacacactcacaagataaaaggggagggaagaagaaaacaacaaacaccaaagagattgttcacccagttcggtccaaacttgacctactctg 25690087  T
Q  200 gaggagagattgtactcttcaatc 223  Q
    |||||||| ||||||||| |||||    
T  25690086 gaggagagtttgtactctccaatc 25690063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 42575160 - 42575383
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||  | | | |||||||| || ||||||||||||||||||||| ||||||||||||||||| |    
T  42575160 atgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtg 42575259  T
Q  100 aaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
    ||||| |  |  ||| ||||||||| ||||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  42575260 aaacaaagcaaccaaacacaagatacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctactct 42575358  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||| ||||||||| |||||    
T  42575359 ggaggagagtttgtactctccaatc 42575383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 15290857 - 15290633
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||  | | | |||||||| || |||||| |||||||||||||| |||||||||| |||||| |    
T  15290857 atgtgtggagcgacggagagtggtaaccacctaacaaagcttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtgtg 15290758  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||| || ||| ||||||||||  |||||||||||||||||||||||||| |||    
T  15290757 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaacac-aaagagattggacacccagttcggtccaaacttgacctactc 15290659  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||| ||||||||| |||||    
T  15290658 tggaggagagtttgtactctccaatc 15290633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 15471226 - 15471002
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||  | | | |||||||| || |||||| |||||||||||||| |||||||||| |||||| |    
T  15471226 atgtgtggagcgacggagagtggtaaccacctaacaaagcttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtgtg 15471127  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||| || ||| ||||||||||  |||||||||||||||||||||||||| |||    
T  15471126 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaacac-aaagagattggacacccagttcggtccaaacttgacctactc 15471028  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||| ||||||||| |||||    
T  15471027 tggaggagagtttgtactctccaatc 15471002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 2628065 - 2627845
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataa-tcaacaa-aacaccacctagatctaatctaggaaacaagtga 98  Q
    ||||||||||| | ||| ||| |||||||| || ||||||| |||  ||||||| || ||||||| |||| |||||||||||||||||||||||||||||    
T  2628065 atgtgtggagcaaaggaaagtagtaaccactaa-caaagtgggtg--caagcaaaaaatcaacaataacaacacctagatctaatctaggaaacaagtga 2627969  T
Q  99 gaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
     || || || |||||| |||||||||||||||||||||||| |||||||||  |||| |||||||| |||||||||||||||||||||||||||| ||||    
T  2627968 aaagcataaaacacaagcacaagataaaaggagagggaagaggaaaacaaagacacc-aagagattattcacccagttcggtccaaacttgacctactct 2627870  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||||||| ||||| |||||    
T  2627869 ggaggagagattgaactctccaatc 2627845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 46 - 217
Target Start/End: Complemental strand, 31218541 - 31218372
Alignment:
Q  46 tgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaa 143  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| || ||||| ||| || ||||||||||||||||||  ||||   |    
T  31218541 tgcaagcaataatcaacaataacagcacctagatctaatctaggaaacaaagtgaaaagcacaaaacataagcacaagataaaaggagag--aagagaga 31218444  T
Q  144 aacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactct 217  Q
    ||||||  |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  31218443 aacaaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactct 31218372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 42498477 - 42498315
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||| ||| |||| |||||||| || |||| || |||||||||||||||  |||| | ||    
T  42498477 caagcaataattaacaataacaacacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaaaggagag--aagagggaa 42498380  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  |||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42498379 acaaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattg 42498315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 223
Target Start/End: Complemental strand, 17982935 - 17982762
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| || |||||  ||||| || || ||||||||||||  ||||   |||    
T  17982935 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaccacaagcaaaatataaaaggagag--aagagagaaa 17982838  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||  |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  17982837 caaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 17982762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 19945243 - 19945418
Alignment:
Q  46 tgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaa 143  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| | |||||| || |||||  ||||| || || ||||||||||||  ||||   |    
T  19945243 tgcaagcaataatcaacaataacagcacctagatctaatctaggaatcgaagtgaaaagcacaaaccacaagcaaaatataaaaggagag--aagagaga 19945340  T
Q  144 aacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||||  |||||||||  |||||||||||||||||| |||||||||||| |||| |||||||||||| ||||| |||||    
T  19945341 aacaaacacaccaaaga--ttgttcacccagttcggttcaaacttgacctactctcgaggagagattgaactctccaatc 19945418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 34254217 - 34254378
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| | || || |||||  ||||| || |||||||||||||||  ||||   |||    
T  34254217 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagagaaaagcacaaaccacaagcaaaagataaaaggagag--aagagagaaa 34254314  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||  |||||||||  ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  34254315 caaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctagaggagagattg 34254378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 34256393 - 34256554
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| | || || |||||  ||||| || |||||||||||||||  ||||   |||    
T  34256393 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagagaaaagcacaaaccacaagcaaaagataaaaggagag--aagagagaaa 34256490  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||  |||||||||  ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  34256491 caaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctagaggagagattg 34256554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 223
Target Start/End: Complemental strand, 44304137 - 44303964
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| |||||||||||||||||| || ||| |||| || |||||  ||||| || |||||||||||||||  ||||   |||    
T  44304137 caagcaataatcaacaataacaacacctagatctaatctagaaatcaaagtgaaaagcacaaaccacaagcaaaagataaaaggagag--aagagagaaa 44304040  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||  |||||||||  ||||||||| |||||| |||||||||||||| ||||||||||||||||| ||||| |||||    
T  44304039 caaacacaccaaaga--ttgttcacctagttcgatccaaacttgacctactctggaggagagattgaactctccaatc 44303964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 223
Target Start/End: Original strand, 1746105 - 1746278
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| || | || | |||  ||||| || || ||||||||||||  ||||   |||    
T  1746105 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtcaaaagcgcaaaccacaagcaaaatataaaaggagag--aagagagaaa 1746202  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||  |||||| ||  ||||||||||||||||||||||||||||||| || |||||||||||||| ||||| |||||    
T  1746203 caaacacaccaacga--ttgttcacccagttcggtccaaacttgacctactatggaggagagattgaactctccaatc 1746278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 42434992 - 42435038
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  42434992 tgttcacccagttcggtccaa-cttgacctactctggaggagagattg 42435038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 223
Target Start/End: Complemental strand, 27811560 - 27811387
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| |||||||||||||| |||||| ||| |||| || ||||| | ||||| || ||||||||   ||||  |||| |  |    
T  27811560 caagcaataatcaacaataacaacacctagatctaatttaggaatcaaagtgaaaagcacaaaatcacaagcaaaagataaagcaagag--aagagggga 27811463  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    | |||  |||||||||  ||||| |||||||||||||| ||||||||||  ||||| ||||||||||  ||||||||||    
T  27811462 aaaaacacaccaaaga--ttgttgacccagttcggtcc-aacttgacctaatctgggggagagattgatctcttcaatc 27811387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 33352432 - 33352271
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacac-aatacacaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| |||||| ||||||||||| || | |||||| |||||| ||| ||||| || ||||||||||||||   ||||    |    
T  33352432 caagcaataatcaacaataacaacacctaaatctaatctagaaatcaaagtgaaaaacacaaatccacaagcaaaagataaaaggaga--taagagagga 33352335  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  || |||  |||||||| |||||||||||||| ||||||||||  ||||| ||||||||||    
T  33352334 acaaacacatcaa--agattgttgacccagttcggtcc-aacttgacctaatctgggggagagattg 33352271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 1345368 - 1345430
Alignment:
Q  160 agattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||||||| ||| ||||||||| || |||||||| |||||| |||||||||| |||||||||||    
T  1345368 agattgttgacctagttcggtctaa-cttgacctactctgggggagagattgaactcttcaatc 1345430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 3303667 - 3303729
Alignment:
Q  160 agattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||||||| |||||||||||||| |||||||||| || ||| ||||||||||  ||||||||||    
T  3303667 agattgtttacccagttcggtcc-aacttgacctactgtgggggagagattgatctcttcaatc 3303729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 18655567 - 18655521
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||||    
T  18655567 tgttcacccagttcggtcc-aacttgacctactttggaggagagattg 18655521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 30143622 - 30143579
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaa 90  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  30143622 caagcaataatcaacaataacaacacctagatctaatctaggaa 30143579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 43036594 - 43036544
Alignment:
Q  160 agattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||| |||||||||||||| ||||||||||  ||||||||||||||||    
T  43036594 agattgttgacccagttcggtcc-aacttgacctaatctggaggagagattg 43036544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 11384152 - 11384108
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagat 209  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  11384152 tgttcacccagttcggtcc-aacttaacctactctggaggagagat 11384108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 4731936 - 4731852
Alignment:
Q  52 caataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagataaaaggagag 133  Q
    ||||||||||||| |||| ||||||||||||||||||||| | |||||| || ||||| | ||||| || |||||||| ||||||    
T  4731936 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagag 4731852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 32902096 - 32902132
Alignment:
Q  71 acctagatctaatctaggaaacaagtgagaaacacaa 107  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  32902096 acctagatctaatctaggaaccaagtgaaaaacacaa 32902132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 184; Significance: 1e-99; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 40282708 - 40282486
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaa-caaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40282708 atgtgtggagcaaaggagagtggtaaccaccaaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 40282609  T
Q  100 aaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctg 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| |||||    
T  40282608 aaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaagacacc-aagagattgttcacccagttcggtccaaacttgacctactctg 40282510  T
Q  200 gaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||| |||||    
T  40282509 gaggagagattgtactctccaatc 40282486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 20622075 - 20622296
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20622075 atgtgtggagcaaaggaaagtagtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 20622174  T
Q  101 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctgg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  20622175 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaagacacc-aagagattgttcacccagttcggtccaaacttgacctactctgg 20622273  T
Q  201 aggagagattgtactcttcaatc 223  Q
    ||||||||||||||||| |||||    
T  20622274 aggagagattgtactctccaatc 20622296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 9987530 - 9987310
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9987530 atgtgtggagcaaaggagagtggtaaccaccaatcaaagtgtgtg--caagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 9987433  T
Q  101 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaag-caccaaagagattgttcacccagttcggtccaaacttgacctgctctg 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  9987432 aacactatacacaatcacaagataaaaggagagggaagaagaaaacaaaagacaccaa-gagattgttcacccagttcggtccaaacttgacctactctg 9987334  T
Q  200 gaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||| |||||    
T  9987333 gaggagagattgtactctccaatc 9987310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 21054286 - 21054067
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21054286 atgtgtggagcaaaggagagtggtaaccaccaaactaagtgtgtg--caagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 21054189  T
Q  101 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctgg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  21054188 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaatacacc-aagagattggtcacccagttcggtccaaacttgacctactctgg 21054090  T
Q  201 aggagagattgtactcttcaatc 223  Q
    ||||||| ||||||||| |||||    
T  21054089 aggagagtttgtactctccaatc 21054067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 9036748 - 9036525
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||    
T  9036748 atgtgtggagctaaggagagtggtaaccaccaaacaaagtgtttgtgcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtga 9036649  T
Q  101 aacacaatacacaatcacaagataa--aaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
    |||||||  ||||||||||||||||  ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  9036648 aacacaaagcacaatcacaagataaacaaggagagggaagaagaaaacaaatacacc-aagagattgttcacccagttcggtccaaacttgacctactct 9036550  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
     ||||||||||||||||||||||||    
T  9036549 cgaggagagattgtactcttcaatc 9036525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 44203965 - 44203741
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |    
T  44203965 atgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 44203866  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  44203865 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 44203767  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  44203766 tggaggagagattgtactctccaatc 44203741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 51765684 - 51765506
Alignment:
Q  45 gtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaaga 142  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| || |||||  ||||| |||||||||||||||||||||||| ||    
T  51765684 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaccacaagcacaagataaaaggagagggaagagga 51765585  T
Q  143 aaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||||||  |||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| |||||    
T  51765584 aaacaaagacaccaaaga--ttgttcacccagttcggtccaaacttgtcctactctggaggagagattgaactctccaatc 51765506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 13316236 - 13316411
Alignment:
Q  46 tgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaa 143  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| ||||||||  ||||| || || ||||||||||||  ||||   |    
T  13316236 tgcaagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaccacaagcaaaatataaaaggagag--aagagaga 13316333  T
Q  144 aacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||||  ||| |||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  13316334 aacaaactcactaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 13316411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 8550670 - 8550834
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaata-cacaatcacaagataaaaggagagggaaga-agaa 143  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| |||||||| | ||||| |||||||||||  |||| | |||| ||||    
T  8550670 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaaacacaaaatcacaagcacaagataaagagagaag-aagagagaa 8550768  T
Q  144 aacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||  |||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8550769 aacaaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattg 8550834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 20762950 - 20762793
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaagtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    |||| || ||||| || |||| || |||||||||||||||  ||||   |||    
T  20762950 caagcaataatcaacaataacagcacctagatctaatctaggaa----gtgaaaagcacaaaaccacaagcaaaagataaaaggagag--aagagagaaa 20762857  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||  |||||||||  ||| ||||| ||||||||||||||||||||| ||||| |||||||||||    
T  20762856 caaacacaccaaaga--ttggtcacctagttcggtccaaacttgacctactctgtaggagagattg 20762793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 211
Target Start/End: Complemental strand, 3189590 - 3189451
Alignment:
Q  70 cacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgtt 167  Q
    |||||||||||||||||| || ||| |||| || ||||| || |||| || |||||||||||||||  ||||   |||||||  |||||||||  |||||    
T  3189590 cacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagag--aagagagaaacaaacacaccaaaga--ttgtt 3189495  T
Q  168 cacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    
T  3189494 cacccagttcggtccaaacttgacctactctggatgagagattg 3189451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 211
Target Start/End: Complemental strand, 3198407 - 3198268
Alignment:
Q  70 cacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgtt 167  Q
    |||||||||||||||||| || ||| |||| || ||||| || |||| || |||||||||||||||  ||||   |||||||  |||||||||  |||||    
T  3198407 cacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagag--aagagagaaacaaacacaccaaaga--ttgtt 3198312  T
Q  168 cacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    
T  3198311 cacccagttcggtccaaacttgacctactctggatgagagattg 3198268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 211
Target Start/End: Complemental strand, 3207246 - 3207107
Alignment:
Q  70 cacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgtt 167  Q
    |||||||||||||||||| || ||| |||| || ||||| || |||| || |||||||||||||||  ||||   |||||||  |||||||||  |||||    
T  3207246 cacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagag--aagagagaaacaaacacaccaaaga--ttgtt 3207151  T
Q  168 cacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    
T  3207150 cacccagttcggtccaaacttgacctactctggatgagagattg 3207107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 42297968 - 42298034
Alignment:
Q  157 aagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||||||||||| | |||||| |||||||||||||||||  ||||||||||    
T  42297968 aagagattgttcacccagttcggtccaaccatgacctactctggaggagagattgatctcttcaatc 42298034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 29136415 - 29136368
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||    
T  29136415 tgttcacctagttcggtccaaacttgacctactctggaggagagattg 29136368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 3157147 - 3156986
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| || ||||| | ||||| || |||||||| |||||  |||||    |    
T  3157147 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggaga--gaagagagga 3157050  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  ||||||  |||||||| |||||||||||||| ||||||||||  | ||| ||||||||||    
T  3157049 acaaacacaccaa--agattgttgacccagttcggtcc-aacttgacctaatatgggggagagattg 3156986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 13547090 - 13547136
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  13547090 tgttcacccagttcggtccaa-cttgacctactctggaggagagattg 13547136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 13549001 - 13549047
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  13549001 tgttcacccagttcggtccaa-cttgacctactctggaggagagattg 13549047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 37168465 - 37168419
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  37168465 tgttcacccagttcggtccaa-cttgacctactctggaggagagattg 37168419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 11348865 - 11348819
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  11348865 tgttcactcagttcggtccaa-cttgacctactctggaggagagattg 11348819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 28242472 - 28242425
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||||||||||||   |||||| |||||||||||||||||    
T  28242472 tgttcacccagttcggtccaacaatgacctactctggaggagagattg 28242425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 34603740 - 34603686
Alignment:
Q  168 cacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||| |||||||||||| |||||||| |||||||||||||||||  ||||||||||    
T  34603740 cacctagttcggtccaa-cttgacctactctggaggagagattgatctcttcaatc 34603686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 47255340 - 47255387
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||||||||||||   |||||| |||||||||||||||||    
T  47255340 tgttcacccagttcggtccaacaatgacctactctggaggagagattg 47255387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 37033068 - 37033118
Alignment:
Q  160 agattgttcacccagttcggtccaaacttgacctgctctggaggagagatt 210  Q
    ||||||||||||||||||||||||| | |||||| || ||||| |||||||    
T  37033068 agattgttcacccagttcggtccaaccatgacctactatggagaagagatt 37033118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 834164 - 834212
Alignment:
Q  160 agattgttcacccagttcggtccaaacttgacctgctctggaggagagat 209  Q
    |||||||| |||||||||||||| |||||||||| |||||| ||||||||    
T  834164 agattgttgacccagttcggtcc-aacttgacctactctgggggagagat 834212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 44455438 - 44455381
Alignment:
Q  52 caataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaa 107  Q
    ||||||||||||| |||| ||||||||||||||||||||| | |||||| ||||||||    
T  44455438 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaa 44455381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 10925504 - 10925464
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctag 87  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  10925504 caagcaataatcaacaataacaacacctagatctaatctag 10925464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 49918632 - 49918544
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacac-aatacacaatcacaagataaaaggagag 133  Q
    ||||||||||||||||| |||| |||||| |||||||||||||| | || ||| || ||| ||| ||||| || |||||||||||||||    
T  49918632 caagcaataatcaacaataacagcacctatatctaatctaggaatcaaaatgaaaagcacaaatccacaagcaaaagataaaaggagag 49918544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 182; Significance: 2e-98; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 29720693 - 29720473
Alignment:
Q  2 tgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaa 101  Q
    |||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29720693 tgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgtacaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaa 29720594  T
Q  102 acacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctgga 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| |||| ||    
T  29720593 acacaatacacaatcacaagataaaaggagagggaagaagaaaacaaagacacc-aagagattgttcacccagttcggtccaaacttgacctactctaga 29720495  T
Q  202 ggagagattgtactcttcaatc 223  Q
    |||||||||||||||| |||||    
T  29720494 ggagagattgtactctccaatc 29720473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 29722853 - 29722633
Alignment:
Q  2 tgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaa 101  Q
    |||||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29722853 tgtgtggagcaaagtagagtggtaaccaccaaacaaagtgtgtgtacaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaa 29722754  T
Q  102 acacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctgga 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||| ||||||| |||||||    
T  29722753 acacaatacacaatcacaagataaaaggagagggaagaagaaaacaaagacacc-aagagattgttcacccagttcggtccaaatttgacctactctgga 29722655  T
Q  202 ggagagattgtactcttcaatc 223  Q
    |||||||||||||||| |||||    
T  29722654 ggagagattgtactctccaatc 29722633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 29750997 - 29751219
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  29750997 atgtgtggagcaaaggagagtggtaaccaccaaacaatgtgtgtgtgcaagcaataatcaacaaaacaccacctagatataatctagaaaacaagtgaga 29751096  T
Q  101 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaag-caccaaagagattgttcacccagttcggtccaaacttgacctgctctg 199  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||    
T  29751097 aacacagtacacaatcacaagataaaaggagagggaagaagaaaacaaaagacacc-aagagattgttcacccagttcggtccaaacttgacctactctg 29751195  T
Q  200 gaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||| |||||    
T  29751196 gaggagagattgtactctccaatc 29751219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 10593591 - 10593367
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |    
T  10593591 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtattgtgcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 10593492  T
Q  100 aaacacaatacacaatcacaagataa--aaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  ||||||||||||||||  ||||||||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||||| |||    
T  10593491 aaacacaaagcacaatcacaagataaacaaggagagggaagtagaaaacaaatacacc-aagagattgttcacccagttcggtccaaacttgacctactc 10593393  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  10593392 tggaggagagattgtactctccaatc 10593367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 22536130 - 22536342
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaa-caaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||| ||||||||||||| |||||||| ||  ||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  22536130 atgtgtggagcgacggagagcggtaaccaccaaagcaaagtgtatg--caagcaacaatcaacaaaaaac-acctagatctaatctaggaaacaagtgag 22536226  T
Q  100 aaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctg 199  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  22536227 aaactcaaaacacaatcacaagataaaaggggagggaagaagaaaacaaaagcacc-aagagattgttcacccagttcggtccaaacttgacctactctg 22536325  T
Q  200 gaggagagattgtactc 216  Q
    |||||||||||||||||    
T  22536326 gaggagagattgtactc 22536342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 25078454 - 25078230
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||| | | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |    
T  25078454 atgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 25078355  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  25078354 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 25078256  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  25078255 tggaggagagattgtactctccaatc 25078230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 25136423 - 25136199
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||| | | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |    
T  25136423 atgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 25136324  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  25136323 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 25136225  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  25136224 tggaggagagattgtactctccaatc 25136199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 9789064 - 9789283
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | ||| ||| ||||||||||| ||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||| |||||| |    
T  9789064 atgtgtggagcaaaggaaagtagtaaccaccaa-caaagtgt--gtgcaagcaaaaatcaacaaaacagcacctagatctaatctaggaaagaagtgaaa 9789160  T
Q  101 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctgg 200  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9789161 aacacaatacacaagcacaagataaacggagagggaagaggaaaacaaagacaccaaagagattgttcacccagttcggtccaaacttgacctactctgg 9789260  T
Q  201 aggagagattgtactcttcaatc 223  Q
    ||||||||||| ||||| |||||    
T  9789261 aggagagattgaactctccaatc 9789283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18441484 - 18441707
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | ||| ||| ||||||||||| |||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| |||||| |    
T  18441484 atgtgtggagcaaaggaaagtagtaaccaccaa-caaagtgtgtg--caagcaataatcaacaaaacagcacctagatctaatctaggaaagaagtgaaa 18441580  T
Q  101 aa----cacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||    |||||||||||| ||||||||||| |||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||    
T  18441581 aaaaaacacaatacacaagcacaagataaacggagagggaagaggaaaacaaagacaccaaagagattgttcacccagttcggtccaaacttgacctact 18441680  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    || |||||||||||| ||||| |||||    
T  18441681 ctagaggagagattgaactctccaatc 18441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 40380424 - 40380200
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  40380424 atgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 40380325  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || |||||||||||||||    |||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  40380324 aaacacaaagcaacaatcacaagataaacaaggagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 40380226  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||| ||| ||||| |||||    
T  40380225 tggaggagagtttgaactctccaatc 40380200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 40382635 - 40382411
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||| ||||||||||||||||||||||||||| | | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  40382635 atgtgtggagcggcggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 40382536  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || |||||||||||||||    |||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  40382535 aaacacaaagcaacaatcacaagataaacaaggagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 40382437  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||| ||| ||||| |||||    
T  40382436 tggaggagagtttgaactctccaatc 40382411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 16409805 - 16409584
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtga 98  Q
    ||||||||||| | ||| ||| |||||||| || ||||||| |||  ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  16409805 atgtgtggagcaaaggaaagtagtaaccactaa-caaagtgggtg--caagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtga 16409709  T
Q  99 gaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
     || || || |||||| |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  16409708 aaagcataaaacacaagcacaagataaaaggagagggaagaggaaaacaaagacaccaaagagattgttcacccagttcggtccaaacttgacctactct 16409609  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||||||| ||||| |||||    
T  16409608 ggaggagagattgaactctccaatc 16409584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 16544744 - 16544518
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||  | | | |||||||| || ||||||||||||||||||||| ||||||||||||||||| |    
T  16544744 atgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtgtg 16544645  T
Q  100 aaacacaatacacaatcacaagataaa---aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgc 195  Q
    ||||| |  |   || |||||||||||   |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| |    
T  16544644 aaacaaagcaactaaacacaagataaacaaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctac 16544546  T
Q  196 tctggaggagagattgtactcttcaatc 223  Q
    |||||||||||| ||||||||| |||||    
T  16544545 tctggaggagagtttgtactctccaatc 16544518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 26178212 - 26177991
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtga 98  Q
    ||||||||||| | ||| ||| |||||||| || |||||||||||  ||||||||||||||  | |||| ||||||||||||||||||||| ||| ||||    
T  26178212 atgtgtggagcaaaggaaagtagtaaccactaa-caaagtgtgtg--caagcaataatcaatgataacaacacctagatctaatctaggaatcaaagtga 26178116  T
Q  99 gaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
     || || || |||||| |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  26178115 aaagcataaaacacaagcacaagataaaaggagagggaagaggaaaacaaagacaccaaagagattgttcacccagttcggtccaaacttgacctactct 26178016  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||||||| ||||| |||||    
T  26178015 ggaggagagattgaactctccaatc 26177991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 16546966 - 16546740
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||| ||||||||||||||||  | | | |||||||| || ||||||||||||||||| ||| ||||||||||||||||| |    
T  16546966 atgtgtggagcgacggagagtgataaccaccaaacaaagcttattgagcaagcaagaaacaacaaaacaccacctaaatccaatctaggaaacaagtgtg 16546867  T
Q  100 aaacacaatacacaatcacaagataaa---aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgc 195  Q
    ||||| |  |   || |||||||||||   |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| |    
T  16546866 aaacaaagcaactaaacacaagataaacaaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctac 16546768  T
Q  196 tctggaggagagattgtactcttcaatc 223  Q
    |||||||||||| ||||||||| |||||    
T  16546767 tctggaggagagtttgtactctccaatc 16546740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 41 - 223
Target Start/End: Complemental strand, 26171055 - 26170871
Alignment:
Q  41 gtgtgtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaag-tgagaaacacaatacacaatcacaagataaaaggagagggaag 138  Q
    ||||||||||||||||||| |  | |||| ||||||||||||||||||||| |||  ||| || || || |||||| |||||||||||||||||||||||    
T  26171055 gtgtgtgcaagcaataatcgatgataacaacacctagatctaatctaggaatcaaaatgaaaagcataaaacacaagcacaagataaaaggagagggaag 26170956  T
Q  139 aagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    | |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  26170955 aggaaaacaaagacaccaaagagattgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 26170871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 30182872 - 30182697
Alignment:
Q  46 tgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaa 143  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||||||| |||| || ||||| |||||| ||||||||||||||||||  ||||   |    
T  30182872 tgcaaacaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaacacaagcacaagataaaaggagag--aagagaga 30182775  T
Q  144 aacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||||  |||||||||  ||||||| ||||||||||||||||||||| | ||||||||||||||||| ||||| |||||    
T  30182774 aacaaacacaccaaaga--ttgttcatccagttcggtccaaacttgacatactctggaggagagattgaactctccaatc 30182697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 13343344 - 13343169
Alignment:
Q  46 tgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaa 143  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| || |||||  ||||| || || ||||||||||||  ||||   |    
T  13343344 tgcaagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaccacaagcaaaatataaaaggagag--aagagaga 13343247  T
Q  144 aacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||||  || ||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||||    
T  13343246 aacaaacacatcaaaga--ttgttcacccagttcggtccaaacatgacctactctggaggagagattgaactctccaatc 13343169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 36073927 - 36074102
Alignment:
Q  46 tgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaa 143  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| || |||||  ||||| || || ||||||||||||  ||||   |    
T  36073927 tgcaagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaatcacaagcaaaacataaaaggagag--aagagaga 36074024  T
Q  144 aacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||||  |||||||||  ||||||| ||||||||||||||||||||||| || |||||||||||||| ||||| |||||    
T  36074025 aacaaacacaccaaaga--ttgttcatccagttcggtccaaacttgacctactttggaggagagattgaactctccaatc 36074102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 25413042 - 25412881
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| |||||| |||||||||||||| ||| | || || |||||  ||||| || |||||||||||||||  ||||   |||    
T  25413042 caagcaataatcaacaataacagcacctatatctaatctaggaatcaaagagaaaagcacaaaccacaagcaaaagataaaaggagag--aagagagaaa 25412945  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||  |||||||||  ||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  25412944 caaacacaccaaaga--ttgttcacccagttcagtccaaacttgacctactctggaggagagattg 25412881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 211
Target Start/End: Complemental strand, 13240016 - 13239872
Alignment:
Q  65 aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagaga 162  Q
    |||| |||||||||||||||||| || ||| |||| |||||||| || |||| || |||||||||||||||  ||||   |||||||  ||||||| |      
T  13240016 aacaacacctagatctaatctagtaatcaaagtgaaaaacacaaaaccacaagcaaaagataaaaggagag--aagagagaaacaaacacaccaaaaa-- 13239921  T
Q  163 ttgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  13239920 ttgttcacccagttcggtccaaatttgacctactctggaggagagattg 13239872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 37439313 - 37439262
Alignment:
Q  160 agattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37439313 agattgttcacccagttcggtccaaacttgacctactctggaggagagattg 37439262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 213633 - 213586
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||    
T  213633 tgttcacccagttcggtccaaacttgacctactatggaggagagattg 213586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 28278485 - 28278437
Alignment:
Q  162 attgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  28278485 attgttcacccagttcggtccaa-cttgacctactctggaggagagattg 28278437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 30682809 - 30682897
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacac-aatacacaatcacaagataaaaggagag 133  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| || ||| ||| ||||| || |||||||||||||||    
T  30682809 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaattcacaagcaaaagataaaaggagag 30682897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 40147428 - 40147382
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  40147428 tgttcacccagttcggtccaa-cttgacctactctggaggagagattg 40147382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 211
Target Start/End: Complemental strand, 32637088 - 32636945
Alignment:
Q  65 aacaccacctagatctaatctaggaaacaa-gtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagaga 162  Q
    |||| |||||||||||||||||| || ||| |||| |||| ||| | ||||| ||||||||||| ||||  ||||||   |||||||  |||||||||      
T  32637088 aacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaatcacaagcacaagataaagggag--ggaagagagaaacaaacacaccaaaga-- 32636993  T
Q  163 ttgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||| |||||||||||||| ||||||||||  ||||| ||||||||||    
T  32636992 ttgttgacccagttcggtcc-aacttgacctaatctgggggagagattg 32636945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 5058212 - 5058166
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  5058212 tgttcacccagttcggtcc-aacttgacctactctagaggagagattg 5058166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 161; Significance: 5e-86; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 20344228 - 20344006
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacacca---cctagatctaatctaggaaacaagtg 97  Q
    ||||||||||| | |||||||||||||||||||||||||||||||  ||||||| |||| |||||| ||||   ||||||||||||||||||||||||||    
T  20344228 atgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaatcgacaaaaaaccagcacctagatctaatctaggaaacaagtg 20344131  T
Q  98 agaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  20344130 agaaacacaaaacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtcc-aacttgacctactc 20344032  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  20344031 tggaggagagattgtactctccaatc 20344006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18388595 - 18388819
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||| | | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |    
T  18388595 atgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 18388694  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| || |||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  18388695 aaacacaaagcaacaatcacaagatacaaagagagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 18388793  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  18388794 tggaggagagattgtactctccaatc 18388819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18392031 - 18392255
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||| |||||||||||||||| |||||||| | | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |    
T  18392031 atgtgtggagcgacagagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 18392130  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  18392131 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 18392229  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  18392230 tggaggagagattgtactctccaatc 18392255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 6594393 - 6594617
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  6594393 atgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 6594492  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || |||||||||||||||    |||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  6594493 aaacacaaagcaacaatcacaagataaacaaggagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 6594591  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||| ||||||||| |||||    
T  6594592 tggaggagagtttgtactctccaatc 6594617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 1560500 - 1560725
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||| ||| | | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  1560500 atgtgtggagcgacggagagtggtaaccaccgaacagagtatattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 1560599  T
Q  100 aaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||||||  || |||||||||||||||  |||||||||||||||||||||||  |||||| ||||||| | ||||||||||||||||||||||||| ||    
T  1560600 aaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaa-gagattggttacccagttcggtccaaacttgacctact 1560698  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||||||||||||| |||||    
T  1560699 ctggaggagagattgtactctccaatc 1560725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 6592175 - 6592399
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  6592175 atgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 6592274  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||| |||    |||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  6592275 aaacacaaagcaacaatcacaagaaaaacaaggagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 6592373  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||| ||||||||| |||||    
T  6592374 tggaggagagtttgtactctccaatc 6592399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 32060157 - 32060381
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||| | | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  32060157 atgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 32060256  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || |||||||||||||||    |||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||| |||    
T  32060257 aaacacaaagcaacaatcacaagataaacaaggagggaagaagaaaacaataaacac-aaagagattgttcaccaagttcggtccaaacttgacctactc 32060355  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  32060356 tggaggagagattgtactctccaatc 32060381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 43503994 - 43504212
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaa-gtgag 99  Q
    ||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||   || |||||||||||||||||| ||| ||||     
T  43503994 atgtgtggagcaaaggagagtggtaaccaccaa-caaagtgtgtgtgcaagcaataatcaacaaaaa--cagctagatctaatctaggaatcaaagtgaa 43504090  T
Q  100 aaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctg 199  Q
    || || || |||||| |||||||||||||||||||||||| |||||||||  |||||| |||||||||||||||||||| |||||||||||||| || ||    
T  43504091 aagcataaaacacaagcacaagataaaaggagagggaagaggaaaacaaagacaccaa-gagattgttcacccagttcgatccaaacttgacctactatg 43504189  T
Q  200 gaggagagattgtactcttcaat 222  Q
    |||||||||||| ||||| ||||    
T  43504190 gaggagagattgaactctccaat 43504212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 39731656 - 39731478
Alignment:
Q  45 gtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaaga 142  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| || |||||  ||||| |||||||||||||||||||||||| ||    
T  39731656 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaccacaagcacaagataaaaggagagggaagagga 39731557  T
Q  143 aaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||||||  |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  39731556 aaacaaagacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 39731478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 24790075 - 24789950
Alignment:
Q  98 agaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaag-caccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  |||| |||||| ||||||||||||||||||||||||||||||||||| ||    
T  24790075 agaaacacaatgcacaatcacaagataaaaggagagggaagaagaaaaacaaagacaccaa-gagattgttcacccagttcggtccaaacttgacctact 24789977  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||||| ||||||| |||||    
T  24789976 ctggaggagagatagtactctccaatc 24789950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 35854194 - 35854023
Alignment:
Q  52 caataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaa 149  Q
    ||||||||||||| |||| ||||||||||||||||||||| ||| |||| || || || |||||| |||||||||||||| ||| |||||   |||||||    
T  35854194 caataatcaacaataacagcacctagatctaatctaggaagcaaagtgaaaagcataaaacacaagcacaagataaaagg-gagagaagagagaaacaaa 35854096  T
Q  150 agcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
      |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  35854095 cacaccaa-gagattgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 35854023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 24790330 - 24790230
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24790330 atgtgtggagcaacggaaagtggtaaccaccaaacaaagtgcgtg--caagtaataatcaacaaaacaccacctagatctaatctaggaaacaggtgaga 24790233  T
Q  101 aac 103  Q
    |||    
T  24790232 aac 24790230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 23555323 - 23555161
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| || | ||||||||||| |||| || |||||||||||||||  ||||   ||    
T  23555323 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtaaaaaacacaataccacaagcaaaagataaaaggagag--aagagagaa 23555226  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  || ||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23555225 acaaacacatcaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattg 23555161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 223
Target Start/End: Complemental strand, 4179054 - 4178882
Alignment:
Q  49 aagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaac 146  Q
    |||||||||||||||| |||| ||||||||||||||||||||| ||| |||| ||||||||  ||||| || || ||||||||||||  ||||   ||||    
T  4179054 aagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaccacaagcaaaatataaaaggagag--aagagagaaac 4178957  T
Q  147 aaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||  |||||||||  ||||||||| |||| ||| |||||||||||||||||||||||||||||| ||| |||||||    
T  4178956 aaacacaccaaaga--ttgttcacctagtttggttcaaacttgacctgctctggaggagagattgaactgttcaatc 4178882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 223
Target Start/End: Original strand, 25766842 - 25767019
Alignment:
Q  47 gcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaa-gataaaaggagagggaagaagaa 143  Q
    |||||||||||||||||| |||| ||||||||||||||||||| | ||| |||| ||||||||  ||||| || || ||||||||| ||| ||| |   |    
T  25766842 gcaagcaataatcaacaataacagcacctagatctaatctaggtatcaaagtgaaaaacacaaatcacaagcaaaaagataaaagg-gagagaatagaga 25766940  T
Q  144 aacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||||  |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||    
T  25766941 aacaaacacaccaa-gagattgttcacccagttcggtctaaacttgacctactctggaggagagattgaactctccaatc 25767019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 25616137 - 25615974
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| || ||||| || |||| |||||||||||  |||| | ||||   ||    
T  25616137 caagcaataatcaacaataacaacacctagatctaatctaggaatcgaagtgaaaagcacaaaaccacaagcacaagataaagagagaag-aagagagaa 25616039  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  |||||||||  |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  25616038 acaaacacaccaaaga--ttgttcgcccagttcggtccaaacttgacctactctggaggagagattg 25615974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 29991335 - 29991174
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    |||| |||||||||||| |||| |||||||||||||| |||||| ||| | || || |||||  ||||| || |||||||||||||||  ||||   |||    
T  29991335 caagtaataatcaacaataacaacacctagatctaatataggaatcaaagagaaaagcacaaaccacaagcaaaagataaaaggagag--aagagagaaa 29991238  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||  |||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29991237 caaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattg 29991174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 223
Target Start/End: Complemental strand, 48409092 - 48408913
Alignment:
Q  45 gtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaa-gataaaaggagagggaagaag 141  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| | ||| |||| || |||||  ||||| || || ||||||||| ||| |||||      
T  48409092 gtgcaagcaataatcaacaataacagcacctagatctaatctaggtatcaaagtgaaaagcacaaatcacaagcaaaaagataaaagg-gagagaagaga 48408994  T
Q  142 aaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
     |||||||  |||||| || |||||||||||||||||||| ||||||||| | ||||||||||||||||  ||||| |||||    
T  48408993 gaaacaaacacaccaa-gaaattgttcacccagttcggtctaaacttgacatactctggaggagagattaaactctccaatc 48408913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 34310712 - 34310763
Alignment:
Q  160 agattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34310712 agattgttcacccagttcggtccaaacttgacctactctggaggagagattg 34310763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 211
Target Start/End: Complemental strand, 19502443 - 19502299
Alignment:
Q  65 aacaccacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagaga 162  Q
    |||| |||||||||||||||||| || | |||||| |||| ||| | ||||| ||||| ||||| |||||  |||||   |||||||  ||||||  |||    
T  19502443 aacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcacaaaataaagggaga--gaagagagaaacaaacacaccaa--aga 19502348  T
Q  163 ttgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||| |||| |||||||||||| | |||||||||||||||||    
T  19502347 ttgttcacccacttcgttccaaacttgacttactctggaggagagattg 19502299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 211
Target Start/End: Complemental strand, 27348095 - 27347938
Alignment:
Q  52 caataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaaacaa 148  Q
    ||||||||||||| |||| ||||||||||||||||||||| | |||||| |||||||| | ||||| || ||||||||  | ||| |||||    |||||    
T  27348095 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaa--gtgagagaagagaggaacaa 27347998  T
Q  149 aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |  ||||||  |||||||| |||||||||||||| ||||||||||  ||||| ||||||||||    
T  27347997 acacaccaa--agattgttgacccagttcggtcc-aacttgacctaatctgggggagagattg 27347938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 22270140 - 22270094
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  22270140 tgttcacccagttcggtccaa-cttgacctactctggaggagagattg 22270094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 32358055 - 32358101
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  32358055 tgttcacccagttcggtccaa-cttgacctactctggaggagagattg 32358101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 48599335 - 48599381
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  48599335 tgttcacccagttcggtccaa-cttgatctgctctggaggagagattg 48599381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 2390456 - 2390403
Alignment:
Q  157 aagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||| |||||| |||||||||||| |||||||| |||||||||||||||||    
T  2390456 aagagattattcacctagttcggtccaa-cttgacctactctggaggagagattg 2390403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 211
Target Start/End: Complemental strand, 48489711 - 48489552
Alignment:
Q  50 agcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaaac 146  Q
    ||||||||||||||| |||| ||||||||||||||||||||| | |||||| || ||||| | ||||| || |||||||| || ||  |||||    |||    
T  48489711 agcaataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggcga--gaagagaggaac 48489614  T
Q  147 aaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||  ||||||  |||||||| |||||||||||||| ||||||||||  ||||| ||||||||||    
T  48489613 aaacacaccaa--agattgtttacccagttcggtcc-aacttgacctaatctgggggagagattg 48489552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 43864526 - 43864438
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagataaaaggagag 133  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| || ||||| | ||||| || |||||||| ||||||    
T  43864526 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagag 43864438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 3259162 - 3259116
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  3259162 tgttcacccagttcggttcaa-cttgacctactctggaggagagattg 3259116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 8359316 - 8359363
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||||||||||||   |||||| |||||||||||||||||    
T  8359316 tgttcacccagttcggtccaacaatgacctactctggaggagagattg 8359363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 18126928 - 18126765
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaa 144  Q
    |||||||||||||| || |||| ||||||||||||||||||||| | |||||| || ||||| | ||||| || |||||||| ||||||  || |    |    
T  18126928 caagcaataatcaagaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaaaatagagga 18126829  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  ||||||  |||||||| |||||| ||||| ||||||||||||  ||||| ||||||||||    
T  18126828 acaaacacaccaa--agattgttgacccaggtcggt-caaacttgacctagtctgggggagagattg 18126765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 2e-85; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 27648184 - 27647969
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27648184 atgtgtggagcaaaggagagtggtaaccaccgaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 27648085  T
Q  101 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctgg 200  Q
    ||| |||||      |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||    
T  27648084 aactcaata------cacaagataaaaggagagggaagaagaaaacaaaagcacc-aagagattgttcacccagttcggtccaaacttgatctactctgg 27647992  T
Q  201 aggagagattgtactcttcaatc 223  Q
    ||||||| ||||||||| |||||    
T  27647991 aggagagtttgtactctccaatc 27647969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 16578355 - 16578577
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | |||||||||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||||||||||||||||||| ||    
T  16578355 atgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtga 16578452  T
Q  101 aacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
    |||||||  |||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  16578453 aacacaaagcacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgttcacccagttcggtccaaacttgacctactct 16578552  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||| ||| ||||| |||||    
T  16578553 ggaggagagtttgcactctccaatc 16578577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 16617025 - 16616803
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | |||||||||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||||||||||||||||||| ||    
T  16617025 atgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtga 16616928  T
Q  101 aacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
    |||||||  |||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  16616927 aacacaaagcacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgttcacccagttcggtccaaacttgacctactct 16616828  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||| ||| ||||| |||||    
T  16616827 ggaggagagtttgcactctccaatc 16616803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 16653443 - 16653221
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | |||||||||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||||||||||||||||||| ||    
T  16653443 atgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtga 16653346  T
Q  101 aacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
    |||||||  |||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  16653345 aacacaaagcacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgttcacccagttcggtccaaacttgacctactct 16653246  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||| ||| ||||| |||||    
T  16653245 ggaggagagtttgcactctccaatc 16653221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 16555200 - 16554978
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | |||||||||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||||||||||||||||||| ||    
T  16555200 atgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtga 16555103  T
Q  101 aacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
    |||||||  |||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || |    
T  16555102 aacacaaagcacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgttcacccagttcggtccaaacttgacctacttt 16555003  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||| ||| ||||| |||||    
T  16555002 ggaggagagtttgcactctccaatc 16554978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 16631756 - 16631534
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | |||||||||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||||||||||||||||||| ||    
T  16631756 atgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgtg--caagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtgtga 16631659  T
Q  101 aacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
    |||||||  |||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || |    
T  16631658 aacacaaagcacaatcacaagataaacaaggagagggaagaagaaaacaaatacaccaaagagattgttcacccagttcggtccaaacttgacctacttt 16631559  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||| ||| ||||| |||||    
T  16631558 ggaggagagtttgcactctccaatc 16631534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 25421639 - 25421415
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||| | | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  25421639 atgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 25421540  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || |||||||||||||||    |||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  25421539 aaacacaaagcaacaatcacaagataaacaaggagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 25421441  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  25421440 tggaggagagattgtactctccaatc 25421415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 6027579 - 6027356
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||| |||||||||| ||||| |||| | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  6027579 atgtgtggagcgacggagaggggtaaccacctaacaaggtgtattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 6027480  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || |||||||||||||||| | |||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||| | |||    
T  6027479 aaacacaaagcaacaatcacaagataaaatg-gagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacatactc 6027382  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  6027381 tggaggagagattgtactctccaatc 6027356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 6097289 - 6097510
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaa-caccacctagatctaatctaggaaacaagtg-a 98  Q
    ||||||||||| ||||| ||| |||||||| || |||||||||||  ||||| ||||||||||||| || ||||| ||||||||||||| |||||||| |    
T  6097289 atgtgtggagcaacggaaagtagtaaccactaa-caaagtgtgtg--caagctataatcaacaaaaacagcaccttgatctaatctaggtaacaagtgga 6097385  T
Q  99 gaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
     ||||||||||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  6097386 aaaacacaatacacaatcacaagatacaaggagagggaagaggaaaacaaagacaccaaagagattgttcacccagttcggtccaaacttgacctactct 6097485  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||||||| ||||| |||||    
T  6097486 ggaggagagattgaactctccaatc 6097510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 34167413 - 34167189
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||||||||||   | | | |||||||| || ||||||||||||||||||||| |||||||||| |||||| |    
T  34167413 atgtgtggagcgacggagagtggtaaccaccaaacaaaaaatattgagcaagcaaaaaacaacaaaacaccacctagatcaaatctaggaaccaagtgtg 34167314  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  34167313 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 34167215  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||| ||||||||| |||||    
T  34167214 tggaggagagtttgtactctccaatc 34167189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 65 - 217
Target Start/End: Complemental strand, 412369 - 412217
Alignment:
Q  65 aacaccacctagatctaatctaggaaacaagtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagatt 164  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  412369 aacagcacctagatctaatctaggtaacaagtgaaaaacacaatacacaagcacaagataaaaggagagggaagaagaaaacaaatacaccaaagagatt 412270  T
Q  165 gttcacccagttcggtccaaacttgacctgctctggaggagagattgtactct 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  412269 gttcacccagttcggtccaaacttgacctactctggaggagagattgaactct 412217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 13154248 - 13154024
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||  | | | |||||||| || |||||| |||||||||||||| |||||||||| |||||| |    
T  13154248 atgtgtggagcgacggagagtggtaaccacctaacaaagcttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtgtg 13154149  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| |||    
T  13154148 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctactc 13154050  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||| ||||||||| |||||    
T  13154049 tggaggagagtttgtactctccaatc 13154024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 33341938 - 33342164
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||  | | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  33341938 atgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 33342037  T
Q  100 aaacacaatacacaatcacaagata---aaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgc 195  Q
    ||||| |  |   || |||||||||   |||||||||||||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||| |    
T  33342038 aaacaaagcaactaaacacaagataaacaaaggagagggaagaagaaaacaataaaca-caaagagattggtcacccagttcggtccaaacttgacctac 33342136  T
Q  196 tctggaggagagattgtactcttcaatc 223  Q
    |||||||||||| ||||||||| |||||    
T  33342137 tctggaggagagtttgtactctccaatc 33342164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 3072599 - 3072817
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaac-accacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||| | ||| ||| |||||||| || |||||||||||  |||||||||||||||||||  | ||| |||||||||||||||||||||||||     
T  3072599 atgtgtggagcaaaggaaagtagtaaccactaa-caaagtgtgtg--caagcaataatcaacaaaaatagcacatagatctaatctaggaaacaagtgaa 3072695  T
Q  100 aaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctg 199  Q
    || || || |||||| |||||||||||||||||||||||| |||||||||  |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  3072696 aagcataaaacacaagcacaagataaaaggagagggaagaggaaaacaaagacaccaa-gagattgttcacccagttcggtccaaacttgacctactctg 3072794  T
Q  200 gaggagagattgtactcttcaat 222  Q
    |||||||||||| ||||| ||||    
T  3072795 gaggagagattgaactctccaat 3072817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 34165191 - 34164967
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||||||| |||  | | | |||||||| || ||||||| ||||||||||||| ||||||||||||||||| |    
T  34165191 atgtgtggagcgacggagagtggtaaccaccaaaccaagcttattgagcaagcaagaaacaacaaa-caccacctagatccaatctaggaaacaagtgtg 34165093  T
Q  100 aaacacaatacacaatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||| |  |   || |||||||||||  |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| ||    
T  34165092 aaacaaagcaactaaacacaagataaacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctact 34164994  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||| ||||||||| |||||    
T  34164993 ctggaggagagtttgtactctccaatc 34164967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 2171369 - 2171591
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtga 98  Q
    ||||||||||| | ||| ||| |||||||| || |||||||||||  ||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||    
T  2171369 atgtgtggagcaaaggaaagtagtaaccactaa-caaagtgtgtg--caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtga 2171465  T
Q  99 gaaa---cacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgc 195  Q
     |||   || || |||||| |||||||||||||| ||| |||||   |||||||  |||||| ||||||||||||||||||||||||||||||||||| |    
T  2171466 aaaaaaacataaaacacaagcacaagataaaagg-gagagaagagataaacaaatacaccaa-gagattgttcacccagttcggtccaaacttgacctac 2171563  T
Q  196 tctggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||| ||||| |||||    
T  2171564 tctggaggagagattgaactctccaatc 2171591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 223
Target Start/End: Original strand, 16452214 - 16452388
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaag-ataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| || |||||  ||||| || ||  ||||||||||||  ||||   ||    
T  16452214 caagcaataatcaacaataacatcacctagatctaatctaggaatcaaagtgaaaagcacaaaccacaagcaaaaatataaaaggagag--aagagagaa 16452311  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||||  |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  16452312 acaaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 16452388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 30834418 - 30834595
Alignment:
Q  46 tgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtg--agaaacacaatacacaatcacaagataaaaggagagggaagaag 141  Q
    ||||||||||||||||||| |||| ||||||||||||||||| ||| | |||||  | ||||||||  ||||| || || |||||||||||  |||||      
T  30834418 tgcaagcaataatcaacaataacagcacctagatctaatctatgaatcaaagtgaaaaaaacacaaaccacaagcaaaatataaaaggaga--gaagaga 30834515  T
Q  142 aaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
     |||||||  ||||||  ||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  30834516 taaacaaacacaccaa--agattattcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 30834595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 5408956 - 5409116
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| | || || |||||  ||||| || |||||||||||||||  ||||   |||    
T  5408956 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagagaaaagcacaaaccacaagcaaaagataaaaggagag--aagagagaaa 5409053  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||  |||||||||  ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  5409054 caaacacaccaaaga--ttgttcacc-agttcggtccaaacttgacctactctggaggagagattg 5409116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 5413281 - 5413441
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| | || || |||||  ||||| || |||||||||||||||  ||||   |||    
T  5413281 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagagaaaagcacaaaccacaagcaaaagataaaaggagag--aagagagaaa 5413378  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||  |||||||||  ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  5413379 caaacacaccaaaga--ttgttcacc-agttcggtccaaacttgacctactctggaggagagattg 5413441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 31404561 - 31404722
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaagtgagaaa-cacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| |||    |||| |||||  ||||| || |||||||||||||||  ||||   |||    
T  31404561 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagaggaaagcacaaaccacaagcaaaagataaaaggagag--aagagagaaa 31404658  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||  |||||||||  ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  31404659 caaacacaccaaaga--ttgttcacccagttcggtccaaacttggcctactctggaggagagattg 31404722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6136138 - 6136216
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgt-gtgtgcaagcaataatcaacaaaacaccacctagat 78  Q
    ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| || ||||||||||||||||||||    
T  6136138 atgtgtggagcaacggagagtggtaaccaccaaacaaagtgtattgtgcaagcaagaaacaacaaaacaccacctagat 6136216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 211
Target Start/End: Original strand, 5406109 - 5406247
Alignment:
Q  70 cacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttc 168  Q
    ||||||||||||||||||||| ||| | || || |||||  ||||| || |||||||||||||||  ||||   |||||||  |||||||||  ||||||    
T  5406109 cacctagatctaatctaggaatcaaagagaaaagcacaaaccacaaacaaaagataaaaggagag--aagagagaaacaaacacaccaaaga--ttgttc 5406204  T
Q  169 acccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  5406205 acccagttcggttcaaacttgacctactctggaggagagattg 5406247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 211
Target Start/End: Original strand, 5410434 - 5410572
Alignment:
Q  70 cacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttc 168  Q
    ||||||||||||||||||||| ||| | || || |||||  ||||| || |||||||||||||||  ||||   |||||||  |||||||||  ||||||    
T  5410434 cacctagatctaatctaggaatcaaagagaaaagcacaaaccacaaacaaaagataaaaggagag--aagagagaaacaaacacaccaaaga--ttgttc 5410529  T
Q  169 acccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  5410530 acccagttcggttcaaacttgacctactctggaggagagattg 5410572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 3808701 - 3808755
Alignment:
Q  157 aagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||| |||||||||||| | |||||| |||||||||||||||||    
T  3808701 aagagattgttcacctagttcggtccaatcatgacctactctggaggagagattg 3808755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 211
Target Start/End: Original strand, 33160254 - 33160399
Alignment:
Q  65 aacaccacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagaga 162  Q
    |||| |||||||||||||||||| || | |||||| || ||||| | ||||| || ||||||||| | ||| |||||   |||||||  ||||||  |||    
T  33160254 aacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaaacaaaagataaaaag-gagagaagagagaaacaaacacaccaa--aga 33160350  T
Q  163 ttgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||||| |||||||||||||  | |||||||||||||||||    
T  33160351 ttgttcacccagtttggtccaaacttgaaatactctggaggagagattg 33160399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 17763158 - 17763111
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||| |||||||||||||||||| || |||||||||||||||||    
T  17763158 tgttcacctagttcggtccaaacttgatctactctggaggagagattg 17763111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 21589098 - 21589052
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  21589098 tgttcacccagttcggtccaa-cttgacctactctggaggagagattg 21589052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 21593831 - 21593785
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  21593831 tgttcacccagttcggtccaa-cttgacctactctggaggagagattg 21593785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13159104 - 13159066
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaag 39  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  13159104 atgtgtggagcgacggagagtggtaaccacctaacaaag 13159066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 9182917 - 9183078
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| ||  |||| | ||||| || |||||||| |||||  |||||         
T  9182917 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagtacaaaaccacaagcaaaagataaagggaga--gaagagaggg 9183014  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  ||||||  |||||||| |||||||||||||| |||||||| |  ||||||||||||||||    
T  9183015 acaaacacaccaa--agattgttgacccagttcggtcc-aacttgacataatctggaggagagattg 9183078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 16569193 - 16569143
Alignment:
Q  160 agattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||| |||||||||||||| ||||||||||  ||||||||||||||||    
T  16569193 agattgttgacccagttcggtcc-aacttgacctaatctggaggagagattg 16569143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 33211182 - 33211232
Alignment:
Q  160 agattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||| |||||||||||||| |||||||||| |||||| ||||||||||    
T  33211182 agattgttgacccagttcggtcc-aacttgacctactctgggggagagattg 33211232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 412415 - 412371
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtg 45  Q
    ||||||||||| | ||| ||| |||||||||||||||||||||||    
T  412415 atgtgtggagcaaaggaaagtagtaaccaccaaacaaagtgtgtg 412371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 5043795 - 5043735
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatct 224  Q
    |||||||||||||||||||||   |||||| || ||||||||||||||  |||| ||||||    
T  5043795 tgttcacccagttcggtccaacaatgacctactatggaggagagattgatctctccaatct 5043735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 1e-83; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 6267020 - 6266800
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgaga 100  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||||| |||||| |    
T  6267020 atgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgt--aagcaaaaatcaacaaaacaacacctagatctaatctaggaaagaagtgaaa 6266923  T
Q  101 aacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaag-caccaaagagattgttcacccagttcggtccaaacttgacctgctctg 199  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  6266922 aacacaatacacaagcacaagataaacggagagggaagaagaaaacaaaagacaccaa-gagattgttcacccagttcggtccaaacttgacctactctg 6266824  T
Q  200 gaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||| |||||    
T  6266823 gaggagagattgtactctccaatc 6266800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 12647221 - 12647445
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||| | | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |    
T  12647221 atgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 12647320  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  12647321 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctactc 12647419  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  12647420 tggaggagagattgtactctccaatc 12647445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 13655864 - 13656091
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||| ||| | | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |    
T  13655864 atgtgtggagcgacggagagtggtaaccaccgaacagagtatattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 13655963  T
Q  100 aaacacaataca-caatcacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgc 195  Q
    ||||||||  || |||||||||||||||  |||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| |    
T  13655964 aaacacaaagcaacaatcacaagataaacaaggagagggaagaagaaaacaacaaacaccaaagagattggtcacccagttcggtccaaacttgacctac 13656063  T
Q  196 tctggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||||| |||||    
T  13656064 tctggaggagagattgtactctccaatc 13656091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 32289894 - 32289685
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtga 98  Q
    ||||||||||| | ||| ||| |||||||| || ||||||| |||  ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  32289894 atgtgtggagcaaaggaaagtagtaaccactaa-caaagtgggtg--caagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtga 32289798  T
Q  99 gaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
     || || || |||||| |||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||    
T  32289797 aaagcataaaacacaagcacaagataaaaggagagggaagaggaaaacaaggacaccaaagagattgttcacccagttcggtccaaacttgacctactct 32289698  T
Q  199 ggaggagagattg 211  Q
    |||||||||||||    
T  32289697 ggaggagagattg 32289685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 40 - 223
Target Start/End: Complemental strand, 30833638 - 30833455
Alignment:
Q  40 tgtgtgtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaa 137  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| || |||||  ||||| ||||||||||||||||||||||    
T  30833638 tgtgagtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaccacaagcacaagataaaaggagagggaa 30833539  T
Q  138 gaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    || |||||||||  |||||||||  ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||| |||||    
T  30833538 gaggaaaacaaagacaccaaaga--ttgttcacccagttcagtccaaacttgacctactctggaggagagattgaactctccaatc 30833455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 45 - 223
Target Start/End: Original strand, 4484211 - 4484389
Alignment:
Q  45 gtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaaga 142  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| || || ||  ||||| |||||||||||||||||||||||||||    
T  4484211 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcaaaaaccacaagcacaagataaaaggagagggaagaaga 4484310  T
Q  143 aaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||||||  |||||||||  ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||| |||||    
T  4484311 aaacaaagacaccaaaga--ttgttcacccagttctgtccaaacttgacctactctggaggagagattgaactctccaatc 4484389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 4503017 - 4503192
Alignment:
Q  46 tgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaa 143  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| || ||||| |||||| ||||||||||||||||||  ||||   |    
T  4503017 tgcaagcaataatcaacaataacagcacctagatctaatctaggaaacaaagtgaaaagcacaaaacacaagcacaagataaaaggagag--aagagaga 4503114  T
Q  144 aacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||||  |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  4503115 aacaaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 4503192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 48 - 223
Target Start/End: Complemental strand, 45100036 - 45099863
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| || |||||  ||||| || || ||||||||||||  ||||   |||    
T  45100036 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaatcacaagcaaaatataaaaggagag--aagagagaaa 45099939  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||  |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  45099938 caaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 45099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 36987961 - 36988123
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| || |||||  | |||| || |||||||||||||||  ||||   ||    
T  36987961 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaagccacaagcaaaagataaaaggagag--aagagagaa 36988058  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  |||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36988059 acaaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattg 36988123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 223
Target Start/End: Original strand, 36205551 - 36205724
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaa 145  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| | |||||| || || ||  ||||| || || |||||||||||  |||||   |||    
T  36205551 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcagaaaccacaagcaaaatataaaaggaga--gaagagagaaa 36205648  T
Q  146 caaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    ||||  ||||||  |||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||    
T  36205649 caaacacaccaa--agattgttcacccagttcggtccaaacttgacctactctggaggatagattgaactctccaatc 36205724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 6594890 - 6595053
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    |||| |||||||||||| |||| |||||||||||||||||| || ||| |||| || ||||| || |||| || ||||||||||| ||| |||||   ||    
T  6594890 caagtaataatcaacaataacagcacctagatctaatctagaaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaagg-gagagaagagagaa 6594988  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  |||||||||  |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  6594989 acaaacacaccaaaga--ttgttcactcagttcggtccaaacttgacctactctggaggagagattg 6595053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 211
Target Start/End: Original strand, 5723146 - 5723303
Alignment:
Q  52 caataatcaacaa-aacaccacctagatctaatctaggaaacaagt-gagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaa 149  Q
    ||||||||||||| |||| ||||||||||||||||||||| |||   || || |||||  ||||| || |||||||||||||||   |||   |||||||    
T  5723146 caataatcaacaataacaacacctagatctaatctaggaatcaaaaagaaaagcacaaaccacaagcaaaagataaaaggagagaatagag--aaacaaa 5723243  T
Q  150 agcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
      |||||||||  |||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  5723244 cacaccaaaga--ttgttcacccagttcggtccaaacttaacctactctagaggagagattg 5723303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 2334414 - 2334465
Alignment:
Q  160 agattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  2334414 agattgttcccccagttcggtccaaacttgacctactctggaggagagattg 2334465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 17057255 - 17057416
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaa-acaagtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| |||||||||||||||||||||   |||||| || ||||| | ||||| || |||||||| ||||||   ||| |  |    
T  17057255 caagcaataatcaacaataacagcacctagatctaatctaggaattaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagacgagagg--a 17057352  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  ||||||  |||||||| |||||||||||||| ||||||||||  ||||| ||||||||||    
T  17057353 acaaacacaccaa--agattgttgacccagttcggtcc-aacttgacctagtctgggggagagattg 17057416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 17085238 - 17085399
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaa-acaagtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| |||||||||||||||||||||   |||||| || ||||| | ||||| || |||||||| ||||||   ||| |  |    
T  17085238 caagcaataatcaacaataacagcacctagatctaatctaggaattaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagacgagagg--a 17085335  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  ||||||  |||||||| |||||||||||||| ||||||||||  ||||| ||||||||||    
T  17085336 acaaacacaccaa--agattgttgacccagttcggtcc-aacttgacctagtctgggggagagattg 17085399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 45727096 - 45727050
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  45727096 tgttcacccagttcggtccaa-cttgacctactctggaggagagattg 45727050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 35446885 - 35446928
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagaga 208  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||    
T  35446885 tgttcacccagttcggtcc-aacttgacctactctggaggagaga 35446928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 1631735 - 1631779
Alignment:
Q  166 ttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||||    
T  1631735 ttcactcagttcggtccaa-cttgacctactctggaggagagattg 1631779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 38312522 - 38312434
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagataaaaggagag 133  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||| | |||||| || ||||| | ||||| || |||||||| ||||||    
T  38312522 caagcaacaatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagag 38312434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 2439 - 2663
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |    
T  2439 atgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 2538  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||| |||    
T  2539 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaacacaaaa-agattgttcacccagttcggtccaaacttgacctactc 2637  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  2638 tggaggagagattgtactctccaatc 2663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 7e-73; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 8395937 - 8395712
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  8395937 atgtgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaaaaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 8395838  T
Q  100 aaacacaataca-caatcacaagataaaa-ggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||||||  || ||||||||||||| || ||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| ||    
T  8395837 aaacacaaagcaacaatcacaagatacaatggagagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctact 8395739  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||||||||||||| |||||    
T  8395738 ctggaggagagattgtactctccaatc 8395712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 8393728 - 8393503
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||||||| |||| | | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  8393728 atgtgtggagcgacggagagtggtaaccaccaaacgaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 8393629  T
Q  100 aaacacaataca-caatcacaagataaaa-ggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgct 196  Q
    ||||||||  || ||||||||||||| || ||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| ||    
T  8393628 aaacacaaagcaacaatcacaagatacaatggagagggaagaagaaaacaataaacac-aaagagattgttcacccagttcggtccaaacttgacctact 8393530  T
Q  197 ctggaggagagattgtactcttcaatc 223  Q
    ||||||||||||||||||||| |||||    
T  8393529 ctggaggagagattgtactctccaatc 8393503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 7125235 - 7125011
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||| | | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  7125235 atgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 7125136  T
Q  100 aaacacaatac-acaatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  | ||||||||||||||||    |||||||||||||||||| || || |||||||||||||||||||||||||||    |||||||| |||    
T  7125135 aaacacaaagcaacaatcacaagataaacaaggagggaagaagaaaacaataaaca-caaagagattgttcacccagttcggtctttgcttgacctactc 7125037  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  7125036 tggaggagagattgtactctccaatc 7125011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 31495146 - 31495375
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaac-aagtgag 99  Q
    ||||||||||| | ||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||     
T  31495146 atgtgtggagcaaaggaaagtagtaaccatcaa-caaagtgtgtgtgcaagcaataatcaacaaaacagcacctagatctaatctaggaaacaaagtgaa 31495244  T
Q  100 aaacacaatacacaatcacaa--------gataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgac 191  Q
    || || || |||||| |||||        ||||||||||||||||||| |||||||||  |||| |||||||||||||||||||||||||||||||||||    
T  31495245 aagcataaaacacaagcacaagataaaaggataaaaggagagggaagaggaaaacaaagacacc-aagagattgttcacccagttcggtccaaacttgac 31495343  T
Q  192 ctgctctggaggagagattgtactcttcaatc 223  Q
    || ||||||||||||||||| ||||| |||||    
T  31495344 ctactctggaggagagattgaactctccaatc 31495375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 7123016 - 7122792
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||| | | |||||||||| || |||||||||||||||||||||||||||||||| |||||| |    
T  7123016 atgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtgtg 7122917  T
Q  100 aaacacaatac-acaatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  | ||||||||||||||||    |||||||||||||||||| || || |||||| ||||||||||||||||||||    |||||||| ||     
T  7122916 aaacacaaagcaacaatcacaagataaacaaggagggaagaagaaaacaataaaca-caaagaaattgttcacccagttcggtctttgcttgacctacta 7122818  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||||||||| |||||    
T  7122817 tggaggagagattgtactctccaatc 7122792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 5136399 - 5136174
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||  | | | |||||||| |  |||||||||| ||| ||||||||||||||||| |||||| |    
T  5136399 atgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagagacaacaaaacatcac-tagatctaatctaggaaccaagtgtg 5136301  T
Q  100 aaacacaatacacaat-cacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgc 195  Q
    ||||| |  |  |||  |||||||||||  |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| |    
T  5136300 aaacaaagcaaccaaaacacaagataaacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctac 5136202  T
Q  196 tctggaggagagattgtactcttcaatc 223  Q
    |||||||||||| ||||||||| |||||    
T  5136201 tctggaggagagtttgtactctccaatc 5136174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 5138624 - 5138399
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    |||||||||||||||||||||||||||||||||||||||  | | | |||||||| |  |||||||||| ||| ||||||||||||||||| |||||| |    
T  5138624 atgtgtggagcgacggagagtggtaaccaccaaacaaagcttattgagcaagcaagagacaacaaaacatcac-tagatctaatctaggaaccaagtgtg 5138526  T
Q  100 aaacacaatacacaat-cacaagataaa--aggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgc 195  Q
    ||||| |  |  |||  |||||||||||  |||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| |    
T  5138525 aaacaaagcaaccaaaacacaagataaacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctac 5138427  T
Q  196 tctggaggagagattgtactcttcaatc 223  Q
    |||||||||||| ||||||||| |||||    
T  5138426 tctggaggagagtttgtactctccaatc 5138399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 223
Target Start/End: Original strand, 13992174 - 13992352
Alignment:
Q  45 gtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaa-gataaaaggagagggaagaag 141  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| | ||| |||| || |||||  ||||| || || ||||||||| ||| |||||      
T  13992174 gtgcaagcaataatcaacaataacagcacctagatctaatctaggtatcaaagtgaaaagcacaaatcacaagcaaaaagataaaagg-gagagaagaga 13992272  T
Q  142 aaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
     |||||||  |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  13992273 gaaacaaacacaccaaaga--ttgttcacctagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 13992352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 5369968 - 5370130
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| || ||||| || |||| || |||||||||||||||  ||||   ||    
T  5369968 caagcaataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagag--aagagataa 5370065  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  || ||||||  |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  5370066 acaaacacatcaaaga--ttgttcactcagttcggtccaaacttgacctactctggaggagagattg 5370130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 56178522 - 56178684
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||  || |||| || ||||| || |||| || |||||||||||||||  ||||   ||    
T  56178522 caagcaataataaacaataacaacacctagatctaatctaggaatgaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagag--aagagagaa 56178619  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  |||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  56178620 acaaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattg 56178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 48143330 - 48143164
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaa----cacaata-cacaatcacaagataaaaggagagggaagaa 140  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||| |||| |||    ||||| | ||||| || ||||||||||||||  |||||     
T  48143330 caagcaataatcaacaataacaacacctagatctaatctaggaatcaaagtgaaaaaaaagcacaaaatcacaagcaaaagataaaaggaga--gaagag 48143233  T
Q  141 gaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
      |||||||  ||||||  ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  48143232 agaaacaaacacaccaa--agattgttcacccagtttggtccaaacttgacctactctggaggagagattg 48143164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 211
Target Start/End: Original strand, 29999719 - 29999853
Alignment:
Q  70 cacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttc 168  Q
    ||||||||||||||||||||| ||| | || ||||||||  ||||| || |||| ||||||||||  ||||   |||||||  ||||||      |||||    
T  29999719 cacctagatctaatctaggaatcaaagagaaaaacacaaaccacaagcaaaagacaaaaggagag--aagagagaaacaaacacaccaa------tgttc 29999810  T
Q  169 acccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  29999811 acccagttcggtccaaacttgacctactctggaggagagattg 29999853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 2209889 - 2209836
Alignment:
Q  157 aagagattgttcacccagttcggtccaaacttgacctgctctggaggagagatt 210  Q
    |||||||||||||||||||||||||||| | |||||| ||||||||||||||||    
T  2209889 aagagattgttcacccagttcggtccaaccatgacctactctggaggagagatt 2209836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 52095248 - 52095409
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    |||| |||||||||||| |||| ||||||||||||||||||||  ||| | || || ||||| || ||||  | |||||||||||||||  ||||   ||    
T  52095248 caagtaataatcaacaataacaacacctagatctaatctaggagtcaaagagaaaagcacaaaaccacaaggaaaagataaaaggagag--aagagagaa 52095345  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  ||||||| |  ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  52095346 acaaacacaccaaaaa--ttgttcacccagttcggtccaaacttg-cctactctggaggagagattg 52095409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 52082549 - 52082708
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaacaagt-gagaaacacaatac-acaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||| |||   || || || || || |||| || |||||||||||||||  ||||   ||    
T  52082549 caagcaataatcaacaataacagcacctagatcttatctaggaatcaaaaagaaaagcataaaaccacaagcaaaagataaaaggagag--aagagataa 52082646  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagaga 208  Q
    |||||  |||||||||  |||||||||||  |||||| ||||||||||| ||||||||||||||    
T  52082647 acaaacacaccaaaga--ttgttcacccaaatcggtctaaacttgacctactctggaggagaga 52082708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 50262694 - 50262748
Alignment:
Q  157 aagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||| ||||||    
T  50262694 aagagattgttcacccagttcggtccaacaatgacctactctggaggaaagattg 50262748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 41964580 - 41964537
Alignment:
Q  167 tcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||||||||||||| |||||||| |||||||||||||||||    
T  41964580 tcacccagttcggtccaa-cttgacctactctggaggagagattg 41964537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 8648306 - 8648260
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  8648306 tgttcacccagtttggtccaa-cttgacctactctggaggagagattg 8648260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 41639593 - 41639547
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  41639593 tgttcactcagttcggtccaa-cttgacctactctggaggagagattg 41639547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 50673848 - 50673894
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||||| |||||||||||| |||||||| |||||||||||||||||    
T  50673848 tgttcacctagttcggtccaa-cttgacctactctggaggagagattg 50673894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 34570304 - 34570388
Alignment:
Q  52 caataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagataaaaggagag 133  Q
    ||||||||||||| |||| ||||||||||||||||| ||| | |||||| || ||||| | ||||| || |||||||||||||||    
T  34570304 caataatcaacaataacaacacctagatctaatctaagaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagag 34570388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 3561 - 3785
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||| | | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |    
T  3561 atgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 3660  T
Q  100 aaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctc 197  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||| |||    
T  3661 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaacac-aaagagattggtcacccagttcggtccaaacttgacctactc 3759  T
Q  198 tggaggagagattgtactcttcaatc 223  Q
    |||||||||||||| ||||| |||||    
T  3760 tggaggagagattgaactctccaatc 3785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 4 - 223
Target Start/End: Complemental strand, 6605 - 6382
Alignment:
Q  4 tgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgagaaa 102  Q
    ||||||||||||||||||||||||||||||||||||| | | |||||||||| || |||||| |||||||||||||| ||||||||||||||||| ||||    
T  6605 tgtggagcgacggagagtggtaaccaccaaacaaagtttattgtgcaagcaagaaacaacaatacaccacctagatccaatctaggaaacaagtgtgaaa 6506  T
Q  103 cacaataca-caatcacaagataaaa---ggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctct 198  Q
    |||||  || ||||||||||||||||   ||||||||||||||||||||| | ||| |||||||||| |||||||||||||||||||||| |||| ||||    
T  6505 cacaaagcaacaatcacaagataaaacaaggagagggaagaagaaaacaataacac-aaagagattggtcacccagttcggtccaaacttaacctactct 6407  T
Q  199 ggaggagagattgtactcttcaatc 223  Q
    ||||||||| ||||||||| |||||    
T  6406 ggaggagagtttgtactctccaatc 6382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 198 - 4
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagtgag 99  Q
    ||||||||||||||||||||||||||||||| |||||||| | | |||||||||| || ||||||||||||||||||||||||||||||||||||||| |    
T  198 atgtgtggagcgacggagagtggtaaccacctaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtgtg 99  T
Q  100 aaacacaatac-acaatcacaagataaaaggagagggaagaagaaaacaa-aagcaccaaagagattgttcacccagttcggtccaaacttgacct 193  Q
    ||||||||  | |||||||||||||| ||||||||||||||||||||||| || || ||||||||||| |||||||||||||||||||||||||||    
T  98 aaacacaaagcaacaatcacaagatacaaggagagggaagaagaaaacaataaaca-caaagagattggtcacccagttcggtccaaacttgacct 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 45 - 223
Target Start/End: Original strand, 11042 - 11220
Alignment:
Q  45 gtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaaga 142  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| ||||||||  ||||| |||||||||||||||||||||||| ||    
T  11042 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaaacacaaaccacaagcacaagataaaaggagagggaagagga 11141  T
Q  143 aaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||||||  |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  11142 aaacaaagacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 11220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 45 - 223
Target Start/End: Original strand, 8616 - 8794
Alignment:
Q  45 gtgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaaga 142  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| || |||||  ||||| ||||||||||||| |||||||||| ||    
T  8616 gtgcaagcaataatcaacaataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaccacaagcacaagataaaagaagagggaagagga 8715  T
Q  143 aaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||||||  |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  8716 aaacaaagacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 8794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 434812 - 434642
Alignment:
Q  52 caataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaaaacaaa 149  Q
    ||||||||||||| |||| ||||||||||||||||||||| ||| |||| || ||||| |||||| |||||||||||||| ||| |||||   |||||||    
T  434812 caataatcaacaataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaacacaagcacaagataaaagg-gagagaagagagaaacaaa 434714  T
Q  150 agcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
      ||||||| |  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  434713 cacaccaaata--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 434642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 11892 - 11666
Alignment:
Q  1 atgtgtggagcgacggagagtggtaaccaccaaacaaagtgtgtgtgcaagcaataatcaacaa-aacaccacctagat-ctaatctaggaa-acaa-gt 96  Q
    ||||||||||| | ||| ||| |||||||| || |||||||||||  ||||||||||||||||| |||| ||||||||| |||||||||||| |||| ||    
T  11892 atgtgtggagcaaaggaaagtagtaaccactaa-caaagtgtgtg--caagcaataatcaacaataacagcacctagatactaatctaggaatacaaagt 11796  T
Q  97 g--agaaacacaata---cacaatcacaagataaaaggagagggaagaagaaaacaaaagcaccaaagagattgttcacccagttcggtccaaacttgac 191  Q
    |  | ||| ||||||   ||||| |||||||||||||| ||| |||||   |||||||  |||||| |||||||||||||||||||||||||||||||||    
T  11795 ggaaaaaaaacaataaaacacaagcacaagataaaagg-gagagaagagataaacaaatacaccaa-gagattgttcacccagttcggtccaaacttgac 11698  T
Q  192 ctgctctggaggagagattgtactcttcaatc 223  Q
    || ||||||||||||||||| ||||| |||||    
T  11697 ctactctggaggagagattgaactctccaatc 11666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 1200 - 1024
Alignment:
Q  46 tgcaagcaataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaatacacaatcacaagataaaaggagagggaagaagaa 143  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | ||| |||| || |||||  ||||| || |  ||||||||||||  ||||   |    
T  1200 tgcaagcaataatcaacaataacaccacctagatctaatctaggtatcaaagtgaaaagcacaaaccacaagcaaagtataaaaggagag--aagagaga 1103  T
Q  144 aacaaaag-caccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||||||  |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  1102 aacaaaacacaccaaaga--ttgttcacccagttcggtccaaacttgacctactctggaggagagattgaactctccaatc 1024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 211
Target Start/End: Complemental strand, 114881 - 114723
Alignment:
Q  52 caataatcaacaa-aacaccacctagatctaatctaggaaacaa-gtgagaaacacaataca-caatcacaagataaaaggagagggaagaagaaaacaa 148  Q
    ||||||||||||| |||| |||||| |||||||||||||| ||| |||| || ||||| ||| |||  | |||||||||||||||  ||||   ||||||    
T  114881 caataatcaacaataacaacacctatatctaatctaggaatcaaagtgaaaagcacaaaacaacaagaaaaagataaaaggagag--aagagagaaacaa 114784  T
Q  149 aagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
       |||||||||  ||||||| ||||||||||| |||||| |||| |||||||||||||||||    
T  114783 gcacaccaaaga--ttgttcatccagttcggtctaaacttaacctactctggaggagagattg 114723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 211
Target Start/End: Original strand, 20301 - 20462
Alignment:
Q  48 caagcaataatcaacaa-aacaccacctagatctaatctaggaaac-aagtgagaaacacaata-cacaatcacaagataaaaggagagggaagaagaaa 144  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||| | |||||| |||||||| | ||||| || |||||||| |||||  |||||    |    
T  20301 caagcaataattaacaataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaagggaga--gaagagagga 20398  T
Q  145 acaaaagcaccaaagagattgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    |||||  ||||||  | |||||| |||||||||||||| ||||||||||  ||||| ||||||||||    
T  20399 acaaacacaccaa--aaattgttgacccagttcggtcc-aacttgacctaatctgggggagagattg 20462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 10656 - 10598
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattgtactcttcaatc 223  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||||  ||||||||||    
T  10656 tgtttacccagttcggtccaa-cttgacctactctggaggagagattgatctcttcaatc 10598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 18004 - 18051
Alignment:
Q  164 tgttcacccagttcggtccaaacttgacctgctctggaggagagattg 211  Q
    ||||||||||||||| |||||||||||||| | |||||||||||||||    
T  18004 tgttcacccagttcgatccaaacttgacctaccctggaggagagattg 18051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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