View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11809_low_47 (Length: 329)
Name: NF11809_low_47
Description: NF11809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11809_low_47 |
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Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 8536758 - 8536447
Alignment:
| Q |
1 |
ggttttgattttatttacatccgaaatagagttcgacagcagtgttcttggtctgcatgatgagattttgatttttgaatgttgacaattggcattgtct |
100 |
Q |
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| T |
8536758 |
ggttttgattttatttacatccgaaatagagttcgacaacagtgttcttggtctgcatgatgagattttgatttttgaatgttgacaattggcattgtct |
8536659 |
T |
|
| Q |
101 |
aatgttccttggtaggaatcaccccaaaggctatactctcgtaataatcttgcatagagtatatgaagctaattaattaggcatgaccatgtctgaattc |
200 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
8536658 |
aatgttccttggtaggaatcatcccaaaggctatactctcgtaataattttgcatagagtatatgaagctaattaattaggcatgaccatgtttgaattc |
8536559 |
T |
|
| Q |
201 |
ataatcatatagtaatattttatcagaaaaaactgaattgaggcataaaaatgttcatgcatcgttctgtacaaaccgactcatttgcagatgcacactc |
300 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
8536558 |
ataatcatatagtaatattttatcagaaaaaaccgaattgaggcataaaaatgttcatgcatcgttctgtacaaatcgactcatttgcagatgcacactc |
8536459 |
T |
|
| Q |
301 |
catgattataat |
312 |
Q |
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|||||||||||| |
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| T |
8536458 |
catgattataat |
8536447 |
T |
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