View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11809_low_6 (Length: 618)
Name: NF11809_low_6
Description: NF11809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11809_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 490; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 490; E-Value: 0
Query Start/End: Original strand, 98 - 607
Target Start/End: Complemental strand, 7198096 - 7197587
Alignment:
| Q |
98 |
acttctctgaaaaagttcaccaagtgaagtcctatgttctttcttaccaacacttgtaactgctgtttcagacatttcaacagctgttccaaacaaataa |
197 |
Q |
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| T |
7198096 |
acttctctgaaaaagttcaccaagtgaagtcctatgttctttcttaccaacactagtaactgctgtttcagacatttcaacagctgttccaaacaaataa |
7197997 |
T |
|
| Q |
198 |
ccttgtaaaggacaaacagcatttgtgtctgttccttcaataggttttccacttattgttactatgctgacatggctacttcttccagtgctgacatggc |
297 |
Q |
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| T |
7197996 |
ccttgtaaaggacaaacagcatttgtgtctgttccttcaattggttttccacttattgttactatgctgacatggctacttcttccagtgctgacatggc |
7197897 |
T |
|
| Q |
298 |
tacttcttcctgtgctgacatggctgtttctgcttgaagaatcatagcttagtacatcatcttttgtttcagcaccaagaactttctctaactcatcatt |
397 |
Q |
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| T |
7197896 |
tacttcttccagtgctgacatggctgtttctgcttgaagaatcatagcttagtacatcatcttttgtttcagcaccaagaactttctctaactcatcatt |
7197797 |
T |
|
| Q |
398 |
gatgagtttgagatcattttcagttacttcgtcttcgttttcattttcggttatggtttgaactgagattggaaatgatggtgttgatggatttgatgaa |
497 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
7197796 |
tatgagtttgagatcattttcagttacttcgtcttcgttttcattttcggttatggtttgaactgagattggaaatgatggtgttgatagatttgatgaa |
7197697 |
T |
|
| Q |
498 |
attggttggtctgatccaagtgttccaattgcaaggaagccagggaagagatcaaacatagcatcatcatcttgtgattgtctgccatattcttcttcat |
597 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7197696 |
attggttggtctgatccaagtgttccaattgcaaggaagccagggaagagatcaaacatagcatcatcatcttgtgattgtctgccatattcttcttcat |
7197597 |
T |
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| Q |
598 |
gttcttctct |
607 |
Q |
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| T |
7197596 |
gttcttctct |
7197587 |
T |
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