View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11809_low_64 (Length: 272)
Name: NF11809_low_64
Description: NF11809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11809_low_64 |
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Alignment Details
Target: chr8 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 43 - 239
Target Start/End: Original strand, 4064658 - 4064845
Alignment:
| Q |
43 |
acaaaatatacttgttggtaaccctaggtatagttctgttatactttcagtatgcctcgagtacaaaatagaactcatgttttgtcctgttctaacttgt |
142 |
Q |
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| T |
4064658 |
acaaaatatacttgttggtaaccctaggtatagttctgttatactttaagtatgcctcgagtataaaatagaactcatgttttgtcctgttctaacttgt |
4064757 |
T |
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| Q |
143 |
ctatcaaacaccatcatagggtcgcttattggtatacacaatataattacttgtaccccaagatattgggactaacaagagtcaagagttacctttg |
239 |
Q |
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| T |
4064758 |
ctatca---------atagggtcgcttattggtatacacaatataattacttgtaccccaagatattgggactaacaagagtcaagagttacctttg |
4064845 |
T |
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