View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1180_low_7 (Length: 335)

Name: NF1180_low_7
Description: NF1180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1180_low_7
NF1180_low_7
[»] chr7 (53 HSPs)
chr7 (179-321)||(11542361-11542503)
chr7 (179-321)||(11535443-11535585)
chr7 (179-321)||(18561682-18561824)
chr7 (179-321)||(24850940-24851082)
chr7 (179-321)||(15153127-15153269)
chr7 (179-321)||(29328468-29328610)
chr7 (1-131)||(11535240-11535370)
chr7 (1-131)||(11542158-11542288)
chr7 (189-321)||(12739218-12739350)
chr7 (189-321)||(12751510-12751642)
chr7 (1-131)||(29328683-29328817)
chr7 (179-321)||(13392833-13392975)
chr7 (1-131)||(24850737-24850867)
chr7 (3-131)||(15153367-15153495)
chr7 (3-131)||(12751758-12751886)
chr7 (1-131)||(18561932-18562062)
chr7 (1-131)||(12739441-12739571)
chr7 (207-321)||(8465602-8465716)
chr7 (213-321)||(24442968-24443076)
chr7 (213-321)||(41680559-41680667)
chr7 (214-321)||(15168886-15168993)
chr7 (207-321)||(18400706-18400820)
chr7 (207-321)||(18407690-18407804)
chr7 (212-321)||(47166449-47166558)
chr7 (31-131)||(11557275-11557375)
chr7 (207-319)||(18257150-18257262)
chr7 (207-321)||(19231491-19231605)
chr7 (207-321)||(48808082-48808196)
chr7 (212-318)||(30254743-30254849)
chr7 (212-321)||(18138929-18139038)
chr7 (213-321)||(34129177-34129285)
chr7 (207-321)||(15730353-15730467)
chr7 (207-321)||(18258708-18258822)
chr7 (212-321)||(2205154-2205263)
chr7 (214-308)||(12410113-12410207)
chr7 (214-321)||(25845114-25845222)
chr7 (201-266)||(11557444-11557507)
chr7 (213-321)||(19393018-19393125)
chr7 (214-321)||(12393232-12393339)
chr7 (213-313)||(31189962-31190062)
chr7 (212-306)||(28131180-28131274)
chr7 (1-111)||(13393080-13393191)
chr7 (40-97)||(9978775-9978832)
chr7 (244-308)||(14592509-14592573)
chr7 (207-274)||(10666649-10666716)
chr7 (214-321)||(19389164-19389271)
chr7 (276-321)||(11546418-11546463)
chr7 (186-283)||(22948091-22948188)
chr7 (193-258)||(26135572-26135636)
chr7 (241-289)||(16012077-16012125)
chr7 (29-81)||(30926078-30926130)
chr7 (215-323)||(39112478-39112586)
chr7 (215-287)||(47833385-47833457)
[»] scaffold0433 (2 HSPs)
scaffold0433 (179-321)||(7791-7933)
scaffold0433 (1-131)||(8007-8137)
[»] scaffold0390 (4 HSPs)
scaffold0390 (179-321)||(6315-6457)
scaffold0390 (179-321)||(13331-13473)
scaffold0390 (1-133)||(13103-13235)
scaffold0390 (1-133)||(6087-6219)
[»] scaffold0234 (4 HSPs)
scaffold0234 (179-321)||(1702-1844)
scaffold0234 (179-321)||(10593-10735)
scaffold0234 (1-131)||(10390-10520)
scaffold0234 (1-131)||(1497-1629)
[»] scaffold0061 (3 HSPs)
scaffold0061 (179-321)||(5602-5744)
scaffold0061 (179-321)||(91-233)
scaffold0061 (1-131)||(5374-5504)
[»] chr6 (46 HSPs)
chr6 (179-321)||(17690821-17690963)
chr6 (179-321)||(27380633-27380775)
chr6 (179-321)||(27471016-27471158)
chr6 (179-321)||(29309574-29309716)
chr6 (179-321)||(29316533-29316675)
chr6 (179-321)||(11652407-11652549)
chr6 (179-321)||(27297313-27297455)
chr6 (179-321)||(16558853-16558995)
chr6 (179-321)||(17683850-17683992)
chr6 (1-131)||(27297558-27297688)
chr6 (1-131)||(17690618-17690748)
chr6 (1-131)||(29309789-29309919)
chr6 (1-131)||(29316748-29316878)
chr6 (186-311)||(25536579-25536704)
chr6 (1-131)||(11652597-11652727)
chr6 (1-131)||(27380405-27380535)
chr6 (1-131)||(27470788-27470918)
chr6 (179-321)||(18336338-18336480)
chr6 (5-130)||(17683639-17683765)
chr6 (1-131)||(25536342-25536472)
chr6 (207-321)||(18019414-18019528)
chr6 (207-321)||(27507933-27508047)
chr6 (207-321)||(27525147-27525261)
chr6 (212-321)||(14075083-14075192)
chr6 (185-316)||(28755634-28755765)
chr6 (212-321)||(16789673-16789782)
chr6 (207-321)||(1585694-1585808)
chr6 (212-321)||(22859479-22859588)
chr6 (207-321)||(33317469-33317583)
chr6 (221-321)||(10358653-10358753)
chr6 (213-321)||(22559786-22559894)
chr6 (186-306)||(13358664-13358786)
chr6 (185-321)||(28173220-28173354)
chr6 (212-321)||(8613523-8613632)
chr6 (213-321)||(19734835-19734943)
chr6 (213-321)||(19735110-19735218)
chr6 (214-321)||(21995562-21995669)
chr6 (179-253)||(16393870-16393944)
chr6 (29-111)||(16393660-16393743)
chr6 (68-131)||(16558717-16558780)
chr6 (182-320)||(8510464-8510604)
chr6 (217-290)||(19219156-19219229)
chr6 (229-321)||(8065242-8065334)
chr6 (213-283)||(13175018-13175088)
chr6 (213-283)||(13194612-13194682)
chr6 (85-130)||(16393754-16393799)
[»] chr5 (33 HSPs)
chr5 (179-321)||(24694839-24694981)
chr5 (179-321)||(24701603-24701745)
chr5 (179-321)||(19713879-19714021)
chr5 (185-321)||(19706606-19706742)
chr5 (1-131)||(24694638-24694766)
chr5 (1-131)||(24701402-24701530)
chr5 (1-131)||(19706350-19706480)
chr5 (1-131)||(19713678-19713806)
chr5 (207-321)||(22941854-22941968)
chr5 (207-321)||(25804970-25805084)
chr5 (207-321)||(31097419-31097533)
chr5 (184-321)||(39539232-39539370)
chr5 (1-131)||(18565638-18565774)
chr5 (207-321)||(20941630-20941744)
chr5 (241-321)||(18567943-18568023)
chr5 (212-321)||(23546524-23546633)
chr5 (207-321)||(12764574-12764688)
chr5 (212-321)||(32501-32610)
chr5 (213-321)||(9811323-9811431)
chr5 (213-321)||(17282873-17282981)
chr5 (207-321)||(12789249-12789363)
chr5 (207-321)||(24932892-24933006)
chr5 (213-321)||(17298320-17298427)
chr5 (213-321)||(17314396-17314504)
chr5 (213-321)||(31651370-31651478)
chr5 (212-321)||(5098252-5098361)
chr5 (212-321)||(7865019-7865128)
chr5 (214-316)||(39535800-39535895)
chr5 (212-321)||(26245705-26245815)
chr5 (179-223)||(18565847-18565891)
chr5 (275-321)||(28719234-28719280)
chr5 (34-68)||(39539549-39539583)
chr5 (259-311)||(33476767-33476819)
[»] chr4 (76 HSPs)
chr4 (179-321)||(5714631-5714773)
chr4 (179-321)||(8858851-8858993)
chr4 (179-321)||(18262896-18263038)
chr4 (179-321)||(19926141-19926283)
chr4 (184-321)||(869281-869418)
chr4 (179-321)||(5708003-5708145)
chr4 (179-321)||(26964324-26964466)
chr4 (179-321)||(26971147-26971289)
chr4 (179-321)||(55613367-55613509)
chr4 (179-321)||(10620714-10620856)
chr4 (179-321)||(18269757-18269899)
chr4 (179-321)||(28392515-28392657)
chr4 (1-131)||(8859091-8859221)
chr4 (179-321)||(10627796-10627935)
chr4 (185-321)||(35224242-35224378)
chr4 (179-321)||(8845887-8846029)
chr4 (1-131)||(19919684-19919814)
chr4 (1-131)||(19925913-19926043)
chr4 (1-125)||(55613614-55613738)
chr4 (1-131)||(869520-869650)
chr4 (179-321)||(5667511-5667653)
chr4 (1-131)||(18269972-18270102)
chr4 (1-131)||(28392320-28392450)
chr4 (1-131)||(26971363-26971494)
chr4 (1-131)||(4425793-4425923)
chr4 (179-321)||(4425996-4426138)
chr4 (1-131)||(5708236-5708366)
chr4 (1-131)||(18263111-18263241)
chr4 (1-131)||(10620486-10620616)
chr4 (1-131)||(10627568-10627698)
chr4 (1-131)||(5714871-5715002)
chr4 (1-131)||(8846102-8846232)
chr4 (179-321)||(10676960-10677100)
chr4 (179-321)||(10890600-10890740)
chr4 (179-321)||(10689963-10690103)
chr4 (179-321)||(10903603-10903743)
chr4 (207-321)||(15462104-15462218)
chr4 (207-321)||(28917360-28917474)
chr4 (212-321)||(34976155-34976264)
chr4 (207-321)||(1942293-1942407)
chr4 (207-321)||(2677615-2677729)
chr4 (207-321)||(26532215-26532330)
chr4 (184-266)||(47388330-47388412)
chr4 (212-321)||(15815623-15815732)
chr4 (219-321)||(9488151-9488253)
chr4 (212-321)||(5871019-5871128)
chr4 (212-321)||(17299550-17299659)
chr4 (212-321)||(18110634-18110743)
chr4 (213-321)||(19363013-19363121)
chr4 (207-321)||(4546666-4546780)
chr4 (207-321)||(4675569-4675683)
chr4 (3-108)||(5667248-5667354)
chr4 (207-321)||(18163764-18163878)
chr4 (207-321)||(20244539-20244653)
chr4 (213-321)||(19373949-19374057)
chr4 (214-321)||(5616999-5617105)
chr4 (212-321)||(3368614-3368723)
chr4 (214-310)||(5524582-5524678)
chr4 (213-321)||(11421590-11421698)
chr4 (217-321)||(30040084-30040188)
chr4 (214-321)||(9538562-9538669)
chr4 (244-321)||(24701686-24701763)
chr4 (213-321)||(32637087-32637195)
chr4 (34-130)||(35224456-35224553)
chr4 (1-107)||(47388108-47388215)
chr4 (210-309)||(24699667-24699766)
chr4 (193-283)||(23055635-23055723)
chr4 (229-305)||(9937429-9937505)
chr4 (45-96)||(10676769-10676821)
chr4 (45-96)||(10890409-10890461)
chr4 (207-259)||(11483390-11483442)
chr4 (229-280)||(36092972-36093023)
chr4 (230-272)||(22805837-22805879)
chr4 (29-93)||(10690247-10690312)
chr4 (29-93)||(10903887-10903952)
chr4 (264-308)||(469193-469237)
[»] chr3 (59 HSPs)
chr3 (179-321)||(6110748-6110890)
chr3 (179-321)||(8491179-8491321)
chr3 (179-321)||(10571973-10572115)
chr3 (179-321)||(10578737-10578879)
chr3 (179-321)||(15600265-15600407)
chr3 (179-321)||(15606810-15606952)
chr3 (179-321)||(13211986-13212128)
chr3 (179-321)||(16481864-16482006)
chr3 (179-321)||(17780499-17780641)
chr3 (179-321)||(15356967-15357109)
chr3 (1-133)||(10578510-10578642)
chr3 (179-321)||(17137037-17137179)
chr3 (184-321)||(13517491-13517628)
chr3 (1-131)||(10571744-10571874)
chr3 (1-131)||(15341397-15341527)
chr3 (179-321)||(15341600-15341742)
chr3 (1-131)||(15600062-15600192)
chr3 (1-131)||(15606607-15606737)
chr3 (179-321)||(1646902-1647044)
chr3 (1-131)||(15356764-15356894)
chr3 (1-131)||(17780296-17780426)
chr3 (1-131)||(19081597-19081727)
chr3 (1-125)||(16481635-16481759)
chr3 (179-321)||(23014741-23014883)
chr3 (1-131)||(1646674-1646804)
chr3 (1-131)||(17137277-17137408)
chr3 (27-133)||(6110986-6111092)
chr3 (203-321)||(17197160-17197278)
chr3 (5-131)||(17196930-17197056)
chr3 (28-131)||(13212227-13212330)
chr3 (1-131)||(32056223-32056353)
chr3 (1-131)||(13517708-13517838)
chr3 (1-130)||(18537895-18538024)
chr3 (207-321)||(21034841-21034955)
chr3 (207-321)||(21399395-21399509)
chr3 (207-321)||(15846121-15846235)
chr3 (207-321)||(15316760-15316874)
chr3 (207-321)||(25978312-25978426)
chr3 (207-321)||(28088709-28088823)
chr3 (213-323)||(15538137-15538247)
chr3 (212-321)||(12300512-12300621)
chr3 (179-246)||(19081800-19081867)
chr3 (212-321)||(20147145-20147254)
chr3 (207-321)||(55427623-55427737)
chr3 (17-131)||(23014537-23014651)
chr3 (218-321)||(26816895-26816998)
chr3 (221-321)||(14147623-14147723)
chr3 (269-321)||(18520659-18520711)
chr3 (241-319)||(25800965-25801043)
chr3 (217-321)||(9504990-9505095)
chr3 (184-279)||(35199028-35199126)
chr3 (252-321)||(11788191-11788260)
chr3 (238-288)||(29925697-29925747)
chr3 (238-288)||(29974851-29974901)
chr3 (28-111)||(16201136-16201221)
chr3 (179-220)||(32056418-32056459)
chr3 (240-283)||(9250146-9250189)
chr3 (216-288)||(35543545-35543618)
chr3 (179-215)||(16200972-16201008)
[»] chr1 (43 HSPs)
chr1 (179-321)||(18252714-18252856)
chr1 (184-321)||(27309963-27310100)
chr1 (179-321)||(18531895-18532037)
chr1 (179-321)||(27130791-27130933)
chr1 (1-131)||(18252929-18253059)
chr1 (179-321)||(16358416-16358558)
chr1 (184-321)||(27276946-27277083)
chr1 (184-323)||(22641268-22641407)
chr1 (1-131)||(27130562-27130692)
chr1 (179-321)||(36816016-36816158)
chr1 (1-131)||(9076055-9076185)
chr1 (1-131)||(18531691-18531822)
chr1 (1-131)||(16358213-16358343)
chr1 (1-131)||(27309731-27309860)
chr1 (207-321)||(19706024-19706138)
chr1 (207-321)||(28134308-28134422)
chr1 (207-321)||(9456718-9456832)
chr1 (207-321)||(9460814-9460928)
chr1 (207-321)||(20779231-20779345)
chr1 (207-321)||(22613095-22613208)
chr1 (207-321)||(47667070-47667184)
chr1 (212-321)||(33283447-33283556)
chr1 (207-321)||(43801950-43802064)
chr1 (212-321)||(35935927-35936036)
chr1 (213-321)||(8728266-8728374)
chr1 (207-321)||(14482492-14482606)
chr1 (212-321)||(22669848-22669957)
chr1 (217-321)||(634542-634645)
chr1 (1-107)||(36815775-36815882)
chr1 (188-321)||(31234313-31234447)
chr1 (212-321)||(42816580-42816689)
chr1 (212-321)||(20390830-20390939)
chr1 (252-321)||(12006002-12006071)
chr1 (239-315)||(10852045-10852121)
chr1 (213-305)||(35132557-35132648)
chr1 (179-225)||(9076258-9076304)
chr1 (219-297)||(14234606-14234684)
chr1 (29-111)||(22641052-22641135)
chr1 (213-310)||(12013712-12013807)
chr1 (193-283)||(19819768-19819857)
chr1 (31-71)||(23509839-23509879)
chr1 (34-71)||(25662053-25662090)
chr1 (251-283)||(24301359-24301391)
[»] scaffold0220 (2 HSPs)
scaffold0220 (179-321)||(18971-19113)
scaffold0220 (1-123)||(19219-19342)
[»] chr8 (40 HSPs)
chr8 (179-321)||(6094807-6094949)
chr8 (179-321)||(21941349-21941491)
chr8 (179-321)||(15326882-15327024)
chr8 (179-321)||(15507251-15507393)
chr8 (1-131)||(6095045-6095175)
chr8 (1-131)||(22172384-22172514)
chr8 (1-131)||(21941564-21941696)
chr8 (179-321)||(24643331-24643473)
chr8 (179-321)||(28548731-28548873)
chr8 (1-131)||(15327122-15327252)
chr8 (1-131)||(15507491-15507621)
chr8 (1-131)||(28548946-28549076)
chr8 (207-321)||(8370838-8370952)
chr8 (207-321)||(25611798-25611912)
chr8 (207-321)||(26241088-26241202)
chr8 (184-308)||(24796391-24796515)
chr8 (207-321)||(22130195-22130309)
chr8 (207-321)||(6431490-6431604)
chr8 (207-321)||(21969936-21970050)
chr8 (212-321)||(22659084-22659193)
chr8 (212-321)||(27007108-27007217)
chr8 (212-321)||(27014251-27014360)
chr8 (179-252)||(22172188-22172261)
chr8 (212-321)||(27880078-27880187)
chr8 (212-321)||(28020259-28020368)
chr8 (207-321)||(45533859-45533973)
chr8 (212-321)||(21917278-21917387)
chr8 (215-321)||(8781467-8781573)
chr8 (213-321)||(18835949-18836057)
chr8 (206-321)||(2962515-2962630)
chr8 (29-131)||(24643521-24643624)
chr8 (213-316)||(14978900-14979001)
chr8 (19-111)||(29230335-29230424)
chr8 (239-306)||(38231130-38231195)
chr8 (207-262)||(22646434-22646489)
chr8 (248-315)||(32872300-32872367)
chr8 (273-318)||(2375722-2375767)
chr8 (218-283)||(27098592-27098656)
chr8 (31-64)||(32872123-32872156)
chr8 (227-295)||(37031890-37031958)
[»] scaffold0063 (2 HSPs)
scaffold0063 (179-321)||(6206-6348)
scaffold0063 (18-131)||(6421-6534)
[»] chr2 (26 HSPs)
chr2 (196-321)||(21329646-21329771)
chr2 (185-319)||(22791245-22791379)
chr2 (1-131)||(21329420-21329552)
chr2 (179-321)||(41661956-41662096)
chr2 (1-131)||(22791011-22791141)
chr2 (179-321)||(18620484-18620626)
chr2 (207-321)||(24249618-24249732)
chr2 (207-321)||(30174979-30175093)
chr2 (214-321)||(29801075-29801182)
chr2 (207-321)||(24228799-24228913)
chr2 (213-311)||(36270853-36270951)
chr2 (244-321)||(15341623-15341700)
chr2 (213-308)||(24763262-24763357)
chr2 (216-316)||(12298442-12298542)
chr2 (266-321)||(18797190-18797245)
chr2 (213-321)||(19617038-19617145)
chr2 (252-319)||(20687044-20687111)
chr2 (215-308)||(31848072-31848165)
chr2 (266-323)||(22182960-22183017)
chr2 (185-280)||(18822734-18822832)
chr2 (34-111)||(27353286-27353364)
chr2 (16-60)||(18620805-18620849)
chr2 (230-313)||(23662128-23662211)
chr2 (253-308)||(41332825-41332880)
chr2 (38-71)||(18822934-18822967)
chr2 (215-283)||(40300567-40300634)
[»] scaffold0008 (2 HSPs)
scaffold0008 (179-321)||(229772-229914)
scaffold0008 (18-131)||(229586-229699)
[»] scaffold1199 (1 HSPs)
scaffold1199 (1-131)||(19-154)
[»] scaffold0112 (1 HSPs)
scaffold0112 (207-321)||(786-900)
[»] scaffold1303 (2 HSPs)
scaffold1303 (179-274)||(1343-1438)
scaffold1303 (39-130)||(1180-1272)
[»] scaffold0389 (1 HSPs)
scaffold0389 (207-321)||(765-879)
[»] scaffold0028 (1 HSPs)
scaffold0028 (207-321)||(120332-120446)
[»] scaffold0006 (1 HSPs)
scaffold0006 (207-321)||(66993-67107)
[»] scaffold0264 (1 HSPs)
scaffold0264 (212-321)||(3266-3375)
[»] scaffold0686 (1 HSPs)
scaffold0686 (207-296)||(8099-8188)
[»] scaffold0111 (1 HSPs)
scaffold0111 (213-321)||(27145-27253)
[»] scaffold0086 (1 HSPs)
scaffold0086 (212-316)||(54371-54475)
[»] scaffold0031 (1 HSPs)
scaffold0031 (213-321)||(39578-39686)
[»] scaffold0466 (1 HSPs)
scaffold0466 (240-321)||(12567-12648)
[»] scaffold0017 (1 HSPs)
scaffold0017 (207-292)||(128128-128213)
[»] scaffold0023 (1 HSPs)
scaffold0023 (217-323)||(108718-108824)
[»] scaffold0032 (1 HSPs)
scaffold0032 (16-72)||(107441-107497)
[»] scaffold0160 (1 HSPs)
scaffold0160 (185-321)||(24456-24590)
[»] scaffold0375 (1 HSPs)
scaffold0375 (193-263)||(15842-15912)
[»] scaffold0034 (1 HSPs)
scaffold0034 (193-255)||(81362-81424)
[»] scaffold0186 (1 HSPs)
scaffold0186 (289-321)||(25481-25513)


Alignment Details
Target: chr7 (Bit Score: 143; Significance: 4e-75; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 11542361 - 11542503
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11542361 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 11542460  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11542461 aaacagtgagcggtatctagcaacacatcactgctacccaagt 11542503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 11535443 - 11535585
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11535443 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 11535542  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  11535543 aaacagtgagcggtatctagcaacacatcactgctatccaagt 11535585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 18561824 - 18561682
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18561824 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgacaataatattaaatcacatatttaatattat 18561725  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18561724 aaacagtgagcggtatctagcaacacatcactgctacccaagt 18561682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 24850940 - 24851082
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24850940 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgacaataatattaaatcacatatttaatattat 24851039  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  24851040 aaacagtgagcggtatctagcaacacatcattgctacccaagt 24851082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 15153269 - 15153127
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15153269 gtcttacttagttatttctctcgtctatctgtcctttgtgtgtgaccctataggttcacgtaacgttggcaataatattaaatcacatatttaatattat 15153170  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15153169 aaacagtgagcggtatctagcaacacatcactgctacccaagt 15153127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 29328610 - 29328468
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29328610 gtcttacttatttatttctctcatctatctgttctttgtgtgtgaccctataggttcccgtaacgttgacaataatattaaatcacatatttaatattat 29328511  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  29328510 aaacagtgagcggtatctagcaacacatcgctgctacccaagt 29328468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11535240 - 11535370
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11535240 ttaggttaagcactaacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 11535339  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  11535340 accttacggtggaccgcgtttctctattttt 11535370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11542158 - 11542288
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  11542158 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacgcttaaatacaccgt 11542257  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  11542258 accttacggtggaccgcgtttctctattttt 11542288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 189 - 321
Target Start/End: Complemental strand, 12739350 - 12739218
Alignment:
Q  189 tttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgag 288  Q
    |||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12739350 tttatttctctcatatatccgtcctttgtgtgtgaccttatcggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgag 12739251  T
Q  289 cggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||    
T  12739250 cggtatctagcaacacatcactgctacccaagt 12739218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 189 - 321
Target Start/End: Complemental strand, 12751642 - 12751510
Alignment:
Q  189 tttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgag 288  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||    
T  12751642 tttatttctctcatctatctgtcatttgtgggtgaccctataggttcccgtaacgttggtattaatattaaatcacatatttaatattataagcagtgag 12751543  T
Q  289 cggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||    
T  12751542 cggtatctagcaacacatcactgctacccaagt 12751510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 29328817 - 29328683
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctattt----atagaatcacttgtgtggacaacaagacaacacttaaataca 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  29328817 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttttttatagaatcacttgtgtggacaacaagacaacacttaaataca 29328718  T
Q  97 ccataccttacggtgaaccgcgtttctctattttt 131  Q
    || |||||||||||| |||||||||||||||||||    
T  29328717 ccgtaccttacggtggaccgcgtttctctattttt 29328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 13392975 - 13392833
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||| |||||||||||||||| |||| ||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  13392975 gtcttacttatatatttctctcatctatatgtcatttgtgtgtgaccatataggttcccgtaacgttgacaaaaatattaaatcacatatttaatattat 13392876  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||| ||||||||||||||||||||| ||||||||||    
T  13392875 aaacagtgagtggtatctagcaacacatcacttctacccaagt 13392833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 24850737 - 24850867
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||||||||| |    
T  24850737 ttaggttaagcactcccaaaaagttcgtaatgcttcaacataagggttctatttatagaatcacttgtgtggtcagcaaaacaacacttaaatacaccgt 24850836  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    |||||||||||||||||||||||||||||||    
T  24850837 accttacggtgaaccgcgtttctctattttt 24850867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 15153495 - 15153367
Alignment:
Q  3 aggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccatac 102  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||| |||    
T  15153495 aggtttagcactcacaaaaagtttgtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaacacaccgtac 15153396  T
Q  103 cttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||| |||||||||||||||||||    
T  15153395 cttacggtggaccgcgtttctctattttt 15153367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 12751886 - 12751758
Alignment:
Q  3 aggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccatac 102  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| || |||||||||||||||||||||| |||    
T  12751886 aggttaagcactcacaaaaagttagtaatgcttcaacacaatggttccatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaccgtac 12751787  T
Q  103 cttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||  || ||||||||||||||||    
T  12751786 cttacggtagactgcgtttctctattttt 12751758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18562062 - 18561932
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | || |||||||||||||| ||||||| |    
T  18562062 ttaggtttagcactcacaaaaagttagtaatacttcaacacaagggttctatttatagaattacttgtgtagtcagcaagacaacacttagatacaccgt 18561963  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    || |||||||| |||||||||||||||||||    
T  18561962 actttacggtggaccgcgtttctctattttt 18561932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 12739571 - 12739441
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| || ||||||||||||||||||||   |    
T  12739571 ttaggttaagcactcacaaaaagttagtaatgctacaaaacaaaggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacattgt 12739472  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    |||||||| |  |||||||||||||||||||    
T  12739471 accttacgatagaccgcgtttctctattttt 12739441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 8465716 - 8465602
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  8465716 ctgttctttgtgtgtgaccctataggttctggtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 8465617  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  8465616 cattgctacccaagt 8465602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 24442968 - 24443076
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    ||||| |||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  24442968 tttgtttgtgaccctataggttcttgtcacgttggcaataatattaaatcttatatttaatattataaacagtgagcggtatctaacaagacatcactgc 24443067  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  24443068 tacccaagt 24443076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 41680559 - 41680667
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||| |||    
T  41680559 tttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacatatcattgc 41680658  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  41680659 tacccaagt 41680667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 214 - 321
Target Start/End: Original strand, 15168886 - 15168993
Alignment:
Q  214 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 313  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||| |||||||||||    
T  15168886 ttgtgtgtgaccctataggctcttgtaacgttggcaataatattaaatcttatatttaatattataaacagtgatcagtatctagcaatacatcactgct 15168985  T
Q  314 acccaagt 321  Q
    ||||||||    
T  15168986 acccaagt 15168993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 18400820 - 18400706
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  18400820 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 18400721  T
Q  307 cactgctacccaagt 321  Q
    ||  |||||||||||    
T  18400720 catggctacccaagt 18400706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 18407804 - 18407690
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  18407804 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 18407705  T
Q  307 cactgctacccaagt 321  Q
    ||  |||||||||||    
T  18407704 catggctacccaagt 18407690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 47166449 - 47166558
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    ||||||||||||||||||||||||  || | ||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||| ||    
T  47166449 ctttgtgtgtgaccctataggttctagtcatgttggcaataatattaaatctaatatttaatattataaacaatgagcagtatctagcaacacatcattg 47166548  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  47166549 ctacccaagt 47166558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 11557275 - 11557375
Alignment:
Q  31 tgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccataccttacggtgaaccgcgtttctctatttt 130  Q
    |||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||| | |||||||||||| || |||||||||||||||    
T  11557275 tgcttcaacataagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaacgtaccttacggtggactgcgtttctctatttt 11557374  T
Q  131 t 131  Q
    |    
T  11557375 t 11557375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 18257150 - 18257262
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||| ||||||||  || |||||| |||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  18257150 ctgttctttgtgtgtgaccccataggttcaagtcacgttgacaataatattaaatcctatatttaatattataaacaatgagcggtatctagcaacacat 18257249  T
Q  307 cactgctacccaa 319  Q
    || ||||||||||    
T  18257250 cattgctacccaa 18257262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 19231605 - 19231491
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  |||||||||| |||||||| |||| |||||||||||||||||    
T  19231605 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaataatataaacaatgagtggtatctagcaacacat 19231506  T
Q  307 cactgctacccaagt 321  Q
    |  ||||||||||||    
T  19231505 ctttgctacccaagt 19231491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 48808082 - 48808196
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||| ||||||| ||||||||||||||||||||||    
T  48808082 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatatcataaacaatgagcggtatctagcaacacat 48808181  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  48808182 cattgctacccaagt 48808196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 212 - 318
Target Start/End: Complemental strand, 30254849 - 30254743
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| ||    
T  30254849 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacatcattg 30254750  T
Q  312 ctaccca 318  Q
    |||||||    
T  30254749 ctaccca 30254743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 18138929 - 18139038
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  18138929 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 18139028  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  18139029 ctacccaagt 18139038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 34129285 - 34129177
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    ||||||||||||||||||| |||  || ||||||||||||||||||||||  |||||||||| ||||| || |||||||||||||||||||||||| |||    
T  34129285 tttgtgtgtgaccctatagattctagtcacgttggcaataatattaaatctaatatttaataatataaccaatgagcggtatctagcaacacatcattgc 34129186  T
Q  313 tacccaagt 321  Q
    || ||||||    
T  34129185 tatccaagt 34129177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 15730467 - 15730353
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  15730467 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 15730368  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  15730367 cattgctacccaagt 15730353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 18258708 - 18258822
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||||||| ||   || |||||| |||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  18258708 ctgttctttgtgtgtgaccctatagattttagtcacgttgacaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacat 18258807  T
Q  307 cactgctacccaagt 321  Q
    || || |||||||||    
T  18258808 cattgttacccaagt 18258822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 2205263 - 2205154
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 310  Q
    |||||||||||||||| |||||||  || ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||| ||||||| |    
T  2205263 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcagcacatcatt 2205165  T
Q  311 gctacccaagt 321  Q
    |||||||||||    
T  2205164 gctacccaagt 2205154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 12410207 - 12410113
Alignment:
Q  214 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatca 308  Q
    ||||||||||||||||| ||||  ||||||| || ||||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||||    
T  12410207 ttgtgtgtgaccctataagttcttgtaacgtgggaaataatattaaatcttatatttaatattacaaacagtgagcggtatctagcaactcatca 12410113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 321
Target Start/End: Original strand, 25845114 - 25845222
Alignment:
Q  214 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaac-agtgagcggtatctagcaacacatcactgc 312  Q
    ||||||||||| ||||||||||  ||||| |||||| ||||||||||||  ||||||||||||| |||| | ||||| | ||||||||||||||||||||    
T  25845114 ttgtgtgtgacactataggttcttgtaacattggcattaatattaaatcttatatttaatattagaaactaatgagcagcatctagcaacacatcactgc 25845213  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  25845214 tacccaagt 25845222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 11557444 - 11557507
Alignment:
Q  201 atctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat 266  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  11557444 atctatctgtcctttgtg--tgaccctataggttcccgtaacgttggcaataatattaaatcacat 11557507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 19393018 - 19393125
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    |||||||||||||||||||||||  || | ||||| ||||||||||||||  |||||||||| |||||| | |||| ||||||||||||||||||| |||    
T  19393018 tttgtgtgtgaccctataggttctagtcatgttggaaataatattaaatctaatatttaatactataaa-aatgaggggtatctagcaacacatcattgc 19393116  T
Q  313 tacccaagt 321  Q
    || ||||||    
T  19393117 tatccaagt 19393125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 12393339 - 12393232
Alignment:
Q  214 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 313  Q
    |||||||||| |||||||||||  |||| || || ||||||||||||||  ||||||||||||| |||||||||| | ||||||||||||||||| || |    
T  12393339 ttgtgtgtgaacctataggttcttgtaatgtgggaaataatattaaatcttatatttaatattacaaacagtgagagatatctagcaacacatcattgtt 12393240  T
Q  314 acccaagt 321  Q
    ||| ||||    
T  12393239 acctaagt 12393232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 31189962 - 31190062
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    |||||||||||||| ||||||||  || |||||| |||||||||| |||   ||||||||||||||||||| ||||||||||| ||||||| |||| |||    
T  31189962 tttgtgtgtgaccccataggttctagtcacgttgacaataatatttaatataatatttaatattataaacaatgagcggtatccagcaacaaatcattgc 31190061  T
Q  313 t 313  Q
    |    
T  31190062 t 31190062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 28131274 - 28131180
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    ||||||||||||| |||||||||   || ||||||||||||||||||||||  ||||||||||  ||||||| ||||||||||||| | ||||||    
T  28131274 ctttgtgtgtgactctataggttatagtcacgttggcaataatattaaatctaatatttaatagaataaacaatgagcggtatctaacgacacat 28131180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13393191 - 13393080
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaatacacca 99  Q
    ||||||||||   ||||||||| |  |||||| |||| |||||||||||||||||||||||||||||||||| || |||  ||| ||||||| |||| |     
T  13393191 ttaggttaagtgttcacaaaaactatgtaatgtttcagcacaagggttctatttatagaatcacttgtgtggtcagcaaaccaagcacttaagtacatcg 13393092  T
Q  100 taccttacggtg 111  Q
    ||||||||||||    
T  13393091 taccttacggtg 13393080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 9978832 - 9978775
Alignment:
Q  40 acaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacac 97  Q
    |||||||||||||||||||||||| | |||||| || ||||||||||||||| |||||    
T  9978832 acaagggttctatttatagaatcaatcgtgtggtcagcaagacaacacttaagtacac 9978775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 14592573 - 14592509
Alignment:
Q  244 ttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatca 308  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||| |||| ||| |||| ||||    
T  14592573 ttggcaataatattaaatctaatatttaatattataaacaatgagcagtatttagtaacatatca 14592509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 10666649 - 10666716
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaata 274  Q
    |||| ||||||||||||||||||||||||  || ||||||  ||||||||||||||  ||||||||||    
T  10666649 ctgttctttgtgtgtgaccctataggttctagtcacgttgaaaataatattaaatctaatatttaata 10666716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 19389271 - 19389164
Alignment:
Q  214 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 313  Q
    ||||||| ||||||||| ||||   |||| || | ||||||||||||||  ||||||||||||||||||||| ||   ||| |||| ||||||||  |||    
T  19389271 ttgtgtgcgaccctataagttctattaacattagaaataatattaaatcttatatttaatattataaacagtaagttatatttagctacacatcaaggct 19389172  T
Q  314 acccaagt 321  Q
    ||||||||    
T  19389171 acccaagt 19389164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 11546418 - 11546463
Alignment:
Q  276 tataaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||| ||||| |||||||||||||||| || ||||||    
T  11546418 tataaacagtgagtggtatttagcaacacatcactgttatccaagt 11546463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 22948091 - 22948188
Alignment:
Q  186 ttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    ||||||||||| ||||| ||| || | | |||||||||| ||  |||||| ||||| ||||  | ||||||||||||| |||| | ||||||||||||    
T  22948091 ttatttatttcactcatatatttgacttatgtgtgtgactctgcaggttctcgtaatgttgaaagtaatattaaatcatatatatgatattataaaca 22948188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 26135572 - 26135636
Alignment:
Q  193 tttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatatta 258  Q
    ||||||||||||||||||| | |||||||  ||||||||||| | || ||||||| ||||||||||    
T  26135572 tttctctcatctatctgtcatatgtgtgt-tccctataggttactgtcacgttggtaataatatta 26135636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 16012125 - 16012077
Alignment:
Q  241 acgttggcaataatattaaatcacatatttaatattataaacagtgagc 289  Q
    ||||||||||||||||||||||   ||| |||||||||||||| |||||    
T  16012125 acgttggcaataatattaaatctagtatctaatattataaacaatgagc 16012077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 30926130 - 30926078
Alignment:
Q  29 aatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaaga 81  Q
    ||||||||| || || |||||||||||||||| || |||||||| ||||||||    
T  30926130 aatgcttcagcataaaggttctatttatagaaccatttgtgtggtcaacaaga 30926078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 39112586 - 39112478
Alignment:
Q  215 tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgcta 314  Q
    ||||||||||  |||||||||  |||| |||| |||| ||| || |||  ||||||||||||||||| | |  | ||||||||||||||||| | || ||    
T  39112586 tgtgtgtgactatataggttcttgtaatgttgacaatgatactacatcttatatttaatattataaagaataggtggtatctagcaacacataaatgata 39112487  T
Q  315 cccaagtaa 323  Q
     ||||||||    
T  39112486 tccaagtaa 39112478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 47833385 - 47833457
Alignment:
Q  215 tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtga 287  Q
    ||||||||| | | |||| || |||||||||   ||| ||||||||| ||| |||||||||||||||||||||    
T  47833385 tgtgtgtgatcatctaggctctcgtaacgttaataatcatattaaataacacatttaatattataaacagtga 47833457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 139; Significance: 1e-72; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 7933 - 7791
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7933 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 7834  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7833 aaacagtgagcggtatctagcaacacatcactgctacccaagt 7791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 8137 - 8007
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8137 ttaggttaagcactcacaaaaagttagtaatgtttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 8038  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  8037 accttacggtggaccgcgtttctctattttt 8007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 139; Significance: 1e-72; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 6315 - 6457
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6315 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 6414  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6415 aaacagtgagcggtatctagcaacacatcactgctacccaagt 6457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 13331 - 13473
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13331 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgacaataatattaaatcacatatttaatattat 13430  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13431 aaacagtgagcggtatctagcaacacatcactgctacccaagt 13473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 13103 - 13235
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13103 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 13202  T
Q  101 accttacggtgaaccgcgtttctctatttttgg 133  Q
    |||||||||||||||||||||||||||||||||    
T  13203 accttacggtgaaccgcgtttctctatttttgg 13235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 6087 - 6219
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  6087 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtatggacaacaagacaacacttaaatacaccgt 6186  T
Q  101 accttacggtgaaccgcgtttctctatttttgg 133  Q
    |||||||||||||||||||||||||||||||||    
T  6187 accttacggtgaaccgcgtttctctatttttgg 6219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 139; Significance: 1e-72; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 1702 - 1844
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1702 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 1801  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1802 aaacagtgagcggtatctagcaacacatcactgctacccaagt 1844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 10593 - 10735
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10593 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 10692  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10693 aaacagtgagcggtatctagcaacacatcactgctacccaagt 10735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 10390 - 10520
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10390 ttaggttaagcactcacaaaaagttagtcatgtttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 10489  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  10490 accttacggtggaccgcgtttctctattttt 10520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 1497 - 1629
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctattt--atagaatcacttgtgtggacaacaagacaacacttaaatacacc 98  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  1497 ttaggttaagcactcacaaaaagttagtcatgtttcaacacaagggttctatttttatagaatcacttgtgtggacaacaagacaacacttaaatacacc 1596  T
Q  99 ataccttacggtgaaccgcgtttctctattttt 131  Q
     |||||||||||| |||||||||||||||||||    
T  1597 gtaccttacggtggaccgcgtttctctattttt 1629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 139; Significance: 1e-72; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 5602 - 5744
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5602 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 5701  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5702 aaacagtgagcggtatctagcaacacatcactgctacccaagt 5744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 91 - 233
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  91 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 190  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  191 aaacagtgagcggtatctagcaacacatcactgctaaccaagt 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 5374 - 5504
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5374 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 5473  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  5474 accttacggtggaccgcgtttctctattttt 5504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 17690821 - 17690963
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17690821 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 17690920  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17690921 aaacagtgagcggtatctagcaacacatcactgctacccaagt 17690963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 27380633 - 27380775
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27380633 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 27380732  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27380733 aaacagtgagcggtatctagcaacacatcactgctacccaagt 27380775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 27471016 - 27471158
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471016 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 27471115  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27471116 aaacagtgagcggtatctagcaacacatcactgctacccaagt 27471158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 29309716 - 29309574
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29309716 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 29309617  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29309616 aaacagtgagcggtatctagcaacacatcactgctacccaagt 29309574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 29316675 - 29316533
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29316675 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 29316576  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29316575 aaacagtgagcggtatctagcaacacatcactgctacccaagt 29316533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 11652549 - 11652407
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11652549 gtctcacttatttatgtctctcatctatttgtcctttgtgtgtgaccctataggttcccgtaatgttggcaataatattaaatcacatatttaatattat 11652450  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11652449 aaacagtgagcggtatctagcaacacatcactgctacccaagt 11652407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 27297455 - 27297313
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27297455 gtcttacttatttatttctcccatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacaaatttaatattat 27297356  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27297355 aaacagtgagcggtatctagcaacacatcactgctacccaagt 27297313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 16558853 - 16558995
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16558853 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccatataggttcccgtaacgttgacaataatattaaatcacatatttaatattat 16558952  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  16558953 aaacagtgagcggtatctagcaacacatcactgttacccaagt 16558995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 17683850 - 17683992
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17683850 gtcttacttatttatttctctcatctatctgtcatttgtgtgtgatcctataggttcccgtaacgttggcaataatattaaatcacatatttaatactat 17683949  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17683950 aaacagtgagcggtatctagcaacacatcactgctacccaagt 17683992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 27297688 - 27297558
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27297688 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 27297589  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    |||||||||||||||||||||||||||||||    
T  27297588 accttacggtgaaccgcgtttctctattttt 27297558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 17690618 - 17690748
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  17690618 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 17690717  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  17690718 accttacggtggaccgcgtttctctattttt 17690748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 29309919 - 29309789
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29309919 ttaggttaagcactcaccaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 29309820  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||||||||| |||||||||||||    
T  29309819 accttacggtgaaccgcatttctctattttt 29309789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 29316878 - 29316748
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29316878 ttaggttaagcactcaccaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 29316779  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||||| ||| |||||||||||||    
T  29316778 accttacggtgaatcgcatttctctattttt 29316748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 186 - 311
Target Start/End: Original strand, 25536579 - 25536704
Alignment:
Q  186 ttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagt 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  25536579 ttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttccagtaacattggcaataatattaaatcacatatttaatactataaacagt 25536678  T
Q  286 gagcggtatctagcaacacatcactg 311  Q
    ||||||||||||| ||||||||||||    
T  25536679 gagcggtatctagtaacacatcactg 25536704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 11652727 - 11652597
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |    
T  11652727 ttaggttcagcattcacaaaaaattagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaccgt 11652628  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  11652627 accttacggtggaccgcgtttctctattttt 11652597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 27380405 - 27380535
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27380405 ttaggttaagcactcaccaaaggttaataatgtttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 27380504  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    || |||||||| |||||||||||||||||||    
T  27380505 actttacggtggaccgcgtttctctattttt 27380535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 27470788 - 27470918
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27470788 ttaggttaagcactcaccaaaggttaataatgtttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 27470887  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    || |||||||| |||||||||||||||||||    
T  27470888 actttacggtggaccgcgtttctctattttt 27470918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 18336480 - 18336338
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||| |||||| |||| ||||||||  |||||||||||||  | ||||||| |||||||||||||||||||||||||||||||    
T  18336480 gtcttacttatttatttctcttatctatttgtcttttgtgtgcaaccctataggttcttggaacgttgacaataatattaaatcacatatttaatattat 18336381  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  18336380 aaacagtgagaggtatctagcaacacatcactgctacccaagt 18336338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 17683639 - 17683765
Alignment:
Q  5 gttaagcactcacaaaaag-ttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccatacc 103  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | ||||    
T  17683639 gttaagcactcacaaaaaggttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacatcgtacc 17683738  T
Q  104 ttacggtgaaccgcgtttctctatttt 130  Q
    |||||||| || |||||||||||||||    
T  17683739 ttacggtggactgcgtttctctatttt 17683765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 25536342 - 25536472
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||  |    
T  25536342 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtgatcagaaagacaacacttaaatacactgt 25536441  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||  | |||||||||||||||||    
T  25536442 accttacggtcgatcgcgtttctctattttt 25536472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 18019414 - 18019528
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||| ||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  18019414 ctgttctttgtgtgtgaccccataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 18019513  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  18019514 cattgctacccaagt 18019528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 27507933 - 27508047
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||| ||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||||||    
T  27507933 ctgttctttttgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaattagcggtatctagcaacacat 27508032  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  27508033 cattgctacccaagt 27508047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 27525147 - 27525261
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||| ||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||||||    
T  27525147 ctgttctttttgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaattagcggtatctagcaacacat 27525246  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  27525247 cattgctacccaagt 27525261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 14075192 - 14075083
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||   |||||||||| |||||||| |||||||||||||||||||||||| ||    
T  14075192 ctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatttaatatttaatactataaacaatgagcggtatctagcaacacatcattg 14075093  T
Q  312 ctacccaagt 321  Q
    || |||||||    
T  14075092 cttcccaagt 14075083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 28755634 - 28755765
Alignment:
Q  185 cttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacag 284  Q
    |||| ||||| ||||||| |||||||  ||||||||||| ||| || |||| |||||||||| |||||| ||||||| ||||||||||||||||||||||    
T  28755634 cttacttattcctctcatttatctgttatttgtgtgtgatcctctatgttctcgtaacgttgacaataacattaaattacatatttaatattataaacag 28755733  T
Q  285 tgagcggtatctagcaacacatcactgctacc 316  Q
    |||||||| | ||||||||||  |||||||||    
T  28755734 tgagcggtgtatagcaacacaatactgctacc 28755765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 16789782 - 16789673
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  16789782 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 16789683  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  16789682 ctacccaagt 16789673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 1585694 - 1585808
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  1585694 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 1585793  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  1585794 cattgctacccaagt 1585808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 22859479 - 22859588
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 310  Q
    |||||||||||||||| |||||||  || ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |    
T  22859479 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcaacacatcatt 22859577  T
Q  311 gctacccaagt 321  Q
    |||||||||||    
T  22859578 gctacccaagt 22859588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 33317583 - 33317469
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||| ||||||||||||||  ||||||| || |||||| | ||||||||||||||||||||||    
T  33317583 ctgttctttgtgtgtgaccctgtaggttctagtcacgttggtaataatattaaatctaatatttattactataaataatgagcggtatctagcaacacat 33317484  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  33317483 cattgctacccaagt 33317469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 221 - 321
Target Start/End: Original strand, 10358653 - 10358753
Alignment:
Q  221 tgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaag 320  Q
    |||||||||||||||  ||| ||||| ||||||||||||||   ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  10358653 tgaccctataggttcttgtatcgttgacaataatattaaatattatatttaatattataaacagtgaacggtatctagcaacaaatcactgctatccaag 10358752  T
Q  321 t 321  Q
    |    
T  10358753 t 10358753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 22559786 - 22559894
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    ||||||||| |||||||||||||  || ||||||| |||||||||||||   ||||||||||||||||||| |||||||||||||  ||||||||| |||    
T  22559786 tttgtgtgtaaccctataggttctagtcacgttggtaataatattaaatataatatttaatattataaacaatgagcggtatctaaaaacacatcattgc 22559885  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  22559886 tacccaagt 22559894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 306
Target Start/End: Original strand, 13358664 - 13358786
Alignment:
Q  186 ttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaata--atattaaatcacatatttaatattataaaca 283  Q
    |||||||||||||| ||||||||||| ||||||||||||  | ||||||| |||||| ||| |||||  ||||||||| |||||||| ||| ||| ||||    
T  13358664 ttatttatttctcttatctatctgtcatttgtgtgtgacaatgtaggttcacgtaaccttgacaataatatattaaattacatatttgatactattaaca 13358763  T
Q  284 gtgagcggtatctagcaacacat 306  Q
    ||||||| |||||||||||||||    
T  13358764 gtgagcgatatctagcaacacat 13358786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 185 - 321
Target Start/End: Complemental strand, 28173354 - 28173220
Alignment:
Q  185 cttatttatttctctcatctatctgtccttt-gtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    |||| |||||| |||| |||| ||||||||| |||| ||||||| |||||||  |||||| || |||||| ||||||| |  ||||||||||||| ||||    
T  28173354 cttacttatttttctcgtctaactgtccttttgtgtatgaccctgtaggttcttgtaacggtgacaataa-attaaatta--tatttaatattatgaaca 28173258  T
Q  284 gtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||| |||||||||||||||||||||    
T  28173257 gtgagcggtatctagccacacatcactgctacccaagt 28173220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 8613632 - 8613523
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    ||||||||||||||||||||||||  || ||||||| ||||||||||||||  ||||||| || |||||| | |||||| |||||| |||||||||| ||    
T  8613632 ctttgtgtgtgaccctataggttctagtcacgttggtaataatattaaatctaatatttattactataaataatgagcgatatctaacaacacatcattg 8613533  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  8613532 ctacccaagt 8613523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 19734835 - 19734943
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    |||||||||||||| ||| |||   || ||||||||||||||||||||||   |||||||||||||||||| |||||||| |||||||||| |||| |||    
T  19734835 tttgtgtgtgaccccataagttttagtcacgttggcaataatattaaatctagtatttaatattataaacaatgagcggtgtctagcaacatatcattgc 19734934  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  19734935 tacccaagt 19734943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 19735110 - 19735218
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    |||||||||||||| ||| |||   || ||||||||||||||||||||||   |||||||||||||||||| |||||||| |||||||||| |||| |||    
T  19735110 tttgtgtgtgaccccataagttttagtcacgttggcaataatattaaatctagtatttaatattataaacaatgagcggtgtctagcaacatatcattgc 19735209  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  19735210 tacccaagt 19735218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 21995669 - 21995562
Alignment:
Q  214 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 313  Q
    ||||||||||||| ||| ||||  || ||||||| ||||||||||||||  |||||||| |||||||||| ||||||||||||||||| |||||| ||||    
T  21995669 ttgtgtgtgaccccatatgttctagtcacgttggaaataatattaaatctaatatttaaaattataaacaatgagcggtatctagcaatacatcattgct 21995570  T
Q  314 acccaagt 321  Q
    | ||||||    
T  21995569 atccaagt 21995562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 16393870 - 16393944
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataa 253  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||| ||||||||| | | |||||||||||||||    
T  16393870 gtcttacttatttatttctctcatctatctgtcatttgtttgtgagcctataggtactcataacgttggcaataa 16393944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 16393660 - 16393743
Alignment:
Q  29 aatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaatacaccataccttacggtg 111  Q
    |||| |||| |||||| ||||||||||||||| ||||||||| | || |||| ||| |||||||||||||| ||||||||||||    
T  16393660 aatgtttcagcacaagtgttctatttatagaaccacttgtgtcgtcatcaagtcaatcacttaaatacaccgtaccttacggtg 16393743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 16558717 - 16558780
Alignment:
Q  68 tgtggacaacaagacaacacttaaatacaccataccttacggtgaaccgcgtttctctattttt 131  Q
    ||||| || |||||||||||||||||| ||| || ||||||||| |||||||||||||||||||    
T  16558717 tgtggtcagcaagacaacacttaaatataccgtatcttacggtggaccgcgtttctctattttt 16558780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 320
Target Start/End: Complemental strand, 8510604 - 8510464
Alignment:
Q  182 tcacttatttattt--ctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattata 279  Q
    |||||||||||| |  ||||||||||| |||| | ||||||||||| | ||   ||  |||||||||  ||||||||||||||  |  ||||||||||||    
T  8510604 tcacttatttatctaactctcatctatatgtcgtatgtgtgtgaccatgtataatcttgtaacgttgaaaataatattaaatcttacttttaatattata 8510505  T
Q  280 aacagtgagcggtatctagcaacacatcactgctacccaag 320  Q
    |||| ||||   ||||||| ||||||||||||  |||||||    
T  8510504 aacaatgagtaatatctaggaacacatcactgtcacccaag 8510464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 19219229 - 19219156
Alignment:
Q  217 tgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcg 290  Q
    ||||||| |||||||||||  || |||||||||||||||||||||   ||| ||| ||||||||||| ||||||    
T  19219229 tgtgtgatcctataggttctagtcacgttggcaataatattaaatataataattactattataaacaatgagcg 19219156  T

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Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 321
Target Start/End: Original strand, 8065242 - 8065334
Alignment:
Q  229 taggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||| |||||| ||| |||||||||| ||| ||| ||||||| ||||||||| |||||  |||  |  ||||||||||||||| ||||||    
T  8065242 taggttctcgtaacattgacaataatattgaatgacacatttaattttataaacaatgagcaatatacaataacacatcactgctaaccaagt 8065334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 13175088 - 13175018
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    |||||||||||||||||||||||  ||   ||||| |||||||| ||||   |||||||||||||||||||    
T  13175088 tttgtgtgtgaccctataggttcttgtcgtgttggaaataatatgaaatattatatttaatattataaaca 13175018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 13194682 - 13194612
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    |||||||||||||||||||||||  ||   ||| | ||||||||||||| | |||| ||||||||||||||    
T  13194682 tttgtgtgtgaccctataggttcttgtcgtgttagaaataatattaaattatatatgtaatattataaaca 13194612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 16393754 - 16393799
Alignment:
Q  85 cacttaaatacaccataccttacggtgaaccgcgtttctctatttt 130  Q
    |||||||| ||||| |||||||||||| |||| |||||||||||||    
T  16393754 cacttaaacacaccgtaccttacggtggaccgtgtttctctatttt 16393799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 1e-72; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 24694839 - 24694981
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24694839 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgggaataatattaaatcacatatttaatattat 24694938  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24694939 aaacagtgagcggtatctagcaacacatcactgctacccaagt 24694981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 24701603 - 24701745
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24701603 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgggaataatattaaatcacatatttaatattat 24701702  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24701703 aaacagtgagcggtatctagcaacacatcactgctacccaagt 24701745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 19713879 - 19714021
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||| |||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19713879 gtcttacttacttatttctctcatctatctgtcatttgcgtgtgactctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 19713978  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19713979 aaacagtgagcggtatctagcaacacatcactgctacccaagt 19714021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 185 - 321
Target Start/End: Original strand, 19706606 - 19706742
Alignment:
Q  185 cttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacag 284  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||     
T  19706606 cttatttatttctctcatctatctgtcatttgtgtgtgaccctataggtttccgtaacgtttgcaataatattaaatcacatatttaatattataaacac 19706705  T
Q  285 tgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||    
T  19706706 tgagcggtatctagcaacacatcactgctacccaagt 19706742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 24694638 - 24694766
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  24694638 ttaggttaagcaccca--aaaagttagtaatgcttcaacacaagggttctatttatggaatcacttgtgtggacaacaagacaacacttaaatacaccgt 24694735  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  24694736 accttacggtggaccgcgtttctctattttt 24694766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 24701402 - 24701530
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  24701402 ttaggttaagcaccca--aaaagttagtaatgcttcaacacaagggttctatttatggaatcacttgtgtggacaacaagacaacacttaaatacaccgt 24701499  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  24701500 accttacggtggaccgcgtttctctattttt 24701530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 19706350 - 19706480
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |    
T  19706350 ttaggttaagcactcactaaaagttagttatgcttcaacataagggttctatttatagaatcacttgtgtggtcaacaagacaacacttaaatataccgt 19706449  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    | ||||||||| |||||||||||||||||||    
T  19706450 atcttacggtggaccgcgtttctctattttt 19706480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 19713678 - 19713806
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||| ||  |    
T  19713678 ttaggttaagcactcactaaaagttagttatgcttcaacacaagggttctatttatagaatcacttgtgtgg--tgcaagacaacacttaaatatactgt 19713775  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  19713776 accttacggtggaccgcgtttctctattttt 19713806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 22941968 - 22941854
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  22941968 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 22941869  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  22941868 cattgctacccaagt 22941854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 25804970 - 25805084
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  25804970 ctgttctttgtgtgtgaccctataggttctggtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 25805069  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  25805070 cattgctacccaagt 25805084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 31097533 - 31097419
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||||    
T  31097533 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatccgatatttaatattataaacaatgaacggtatctagcaacacat 31097434  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  31097433 cattgctacccaagt 31097419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 39539370 - 39539232
Alignment:
Q  184 acttatttatttctctcatctatctgtcctttgtgtgtgaccc-tataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaac 282  Q
    ||||||||||||||||||  ||| ||||||||||||||||||| | |||  |||  |||| ||||||||||||||||||||||||||||||||||||||     
T  39539370 acttatttatttctctcacttatatgtcctttgtgtgtgacccctgtagaatccaataacattggcaataatattaaatcacatatttaatattataaat 39539271  T
Q  283 agtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||| ||||||||||||||||||| ||| |||||||||||    
T  39539270 agttagcggtatctagcaacacaacaccgctacccaagt 39539232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 18565638 - 18565774
Alignment:
Q  1 ttaggttaagcactcacaaaaa-gttagtaatgcttcaac-----acaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaata 94  Q
    |||||||||||||||||||||| ||| |||||||||||||     ||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  18565638 ttaggttaagcactcacaaaaaagtttgtaatgcttcaacacaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaata 18565737  T
Q  95 caccataccttacggtgaaccgcgtttctctattttt 131  Q
    |||| | |||||| ||| |||||||||||||| ||||    
T  18565738 caccgtgccttacagtggaccgcgtttctctaatttt 18565774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 20941744 - 20941630
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||| |||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||    
T  20941744 ctgttctttgtgtgtgaccctataggttctagtcacgttggaaataatattaaatttgatatttaatattataaacaatgagcggtatctagcaacacat 20941645  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  20941644 cattgctacccaagt 20941630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 18567943 - 18568023
Alignment:
Q  241 acgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18567943 acgttgacaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcacggctacccaagt 18568023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 23546633 - 23546524
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||| ||    
T  23546633 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatatcataaacaatgagcggtatctagcaacacatcattg 23546534  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  23546533 ctacccaagt 23546524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 12764574 - 12764688
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||| ||||||||||||||  ||||||| || |||||| | ||||||||||||||||||||||    
T  12764574 ctgttctttgtgtgtgaccctataggttctagtcacgttggtaataatattaaatctaatatttattactataaataatgagcggtatctagcaacacat 12764673  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  12764674 cattgctacccaagt 12764688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 32610 - 32501
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||   |||||||||| ||||||| |||||||||||||||||||||||| ||    
T  32610 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatccattatttaatatcataaacaatgagcggtatctagcaacacatcattg 32511  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  32510 ctacccaagt 32501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 9811323 - 9811431
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    |||||||||||||||||||||||  || ||||||| ||||||||||||||  ||||||| || |||||| | |||||||||||||||||||||||| |||    
T  9811323 tttgtgtgtgaccctataggttctagtcacgttggtaataatattaaatctaatatttattactataaataatgagcggtatctagcaacacatcattgc 9811422  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  9811423 tacccaagt 9811431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 17282873 - 17282981
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    |||||||||||||||  ||||||  ||| ||||| |||||||||||||||  ||||||||||||||||||||||||| || ||||||| |||||||||||    
T  17282873 tttgtgtgtgaccctgcaggttcttgtagcgttgacaataatattaaatccaatatttaatattataaacagtgagcagtgtctagcagcacatcactgc 17282972  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  17282973 tacccaagt 17282981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 12789249 - 12789363
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  12789249 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 12789348  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  12789349 cattgctacccaagt 12789363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 24932892 - 24933006
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  24932892 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 24932991  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  24932992 cattgctacccaagt 24933006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 17298320 - 17298427
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    ||||||||| ||||| |||||||   || ||||| |||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  17298320 tttgtgtgt-accctgtaggttcttatagcgttgacaataatattaaatcttatatttaatattataaacagtgagcggtgtctagcaacacatcactgc 17298418  T
Q  313 tacccaagt 321  Q
    || ||||||    
T  17298419 tatccaagt 17298427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 17314396 - 17314504
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    ||||||||| ||||| |||||||  ||| | ||| |||||||||||||||  ||||||||||||||||||| | |||||| |||||||||||||||||||    
T  17314396 tttgtgtgtaaccctgtaggttcttgtagcattgacaataatattaaatcttatatttaatattataaacaataagcggtgtctagcaacacatcactgc 17314495  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  17314496 tacccaagt 17314504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 31651370 - 31651478
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    ||||||||| |||| ||||||||  |||||||||| |||||||| |||||  || |||||||||||||| ||||||||||||||| |||||||||| |||    
T  31651370 tttgtgtgtcaccccataggttcttgtaacgttggtaataatatgaaatcctatgtttaatattataaagagtgagcggtatctaacaacacatcattgc 31651469  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  31651470 tacccaagt 31651478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 5098361 - 5098252
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    ||||||||||||| || ||  |||  || |||||| |||||||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| ||    
T  5098361 ctttgtgtgtgactctttatattctagtcacgttgacaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacatcattg 5098262  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  5098261 ctacccaagt 5098252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 7865019 - 7865128
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    ||||||||||||||||||||||||  || ||||||| ||||||||||||||  ||||||| || |||||| | |||||| |||||| |||||||||| ||    
T  7865019 ctttgtgtgtgaccctataggttctagtcacgttggtaataatattaaatctaatatttattactataaataatgagcgttatctaacaacacatcattg 7865118  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  7865119 ctacccaagt 7865128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 316
Target Start/End: Complemental strand, 39535895 - 39535800
Alignment:
Q  214 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 313  Q
    ||||||||||||| ||||||||  || ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  39535895 ttgtgtgtgaccccataggttctagtcacgttggcaataatatta-------tatttaatattataaacaatgagcggtatctagcaacacatcattgct 39535803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 26245815 - 26245705
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaat-cacatatttaatattataaacagtgagcggtatctagcaacacatcact 310  Q
    |||||||| ||| |||||||||||  || ||||||||||||||||||||| |  || || ||||  ||||||| |||||||||||||||||||||||| |    
T  26245815 ctttgtgtctgatcctataggttctagtcacgttggcaataatattaaattctaatgttcaataccataaacaatgagcggtatctagcaacacatcatt 26245716  T
Q  311 gctacccaagt 321  Q
    |||||||||||    
T  26245715 gctacccaagt 26245705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 18565847 - 18565891
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtga 223  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  18565847 gtcttacttatttatttctctcatctatctgtcctttgtgtgtga 18565891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 28719234 - 28719280
Alignment:
Q  275 ttataaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||| ||||  |||||||||||||||||| ||||||||||||    
T  28719234 ttataaacaatgagatgtatctagcaacacatcattgctacccaagt 28719280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 39539583 - 39539549
Alignment:
Q  34 ttcaacacaagggttctatttatagaatcacttgt 68  Q
    ||||||||||||||||||||||||||| |||||||    
T  39539583 ttcaacacaagggttctatttatagaaccacttgt 39539549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 33476767 - 33476819
Alignment:
Q  259 aatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    ||||||| ||||| |||||||||||||||| | |||||| ||| |||||||||    
T  33476767 aatcacacatttagtattataaacagtgagtgatatctaacaatacatcactg 33476819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 5714773 - 5714631
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714773 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 5714674  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5714673 aaacagtgagcggtatctagcaacacatcactgctacccaagt 5714631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 8858993 - 8858851
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8858993 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 8858894  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8858893 aaacagtgagcggtatctagcaacacatcactgctacccaagt 8858851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 18263038 - 18262896
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18263038 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 18262939  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18262938 aaacagtgagcggtatctagcaacacatcactgctacccaagt 18262896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 19926141 - 19926283
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926141 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 19926240  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19926241 aaacagtgagcggtatctagcaacacatcactgctacccaagt 19926283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 869418 - 869281
Alignment:
Q  184 acttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  869418 acttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 869319  T
Q  284 gtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||||||||||||||||||||||||||    
T  869318 gtgagcggtatctagcaacacatcactgctacccaagt 869281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 5708145 - 5708003
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5708145 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 5708046  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  5708045 aaacagtgagcggtatctagcaacatatcactgctacccaagt 5708003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 26964466 - 26964324
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26964466 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacattggcaataatattaaatcacatatttaatattat 26964367  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26964366 aaacagtgagcggtatctagcaacacatcactgctacccaagt 26964324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 26971289 - 26971147
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26971289 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacattggcaataatattaaatcacatatttaatattat 26971190  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26971189 aaacagtgagcggtatctagcaacacatcactgctacccaagt 26971147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 55613509 - 55613367
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55613509 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 55613410  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  55613409 aaacagtgagcggtatcaagcaacacatcactgctacccaagt 55613367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 10620714 - 10620856
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10620714 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgacaataatattaaatcacatatttaatattat 10620813  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  10620814 aaacagtgagcggtaactagcaacacatcactgctacccaagt 10620856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 18269899 - 18269757
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269899 gtcttacttatttatttctctcatctatctatcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 18269800  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  18269799 aaacagtgagcggtatctagcatcacatcactgctacccaagt 18269757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 28392515 - 28392657
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28392515 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaatgttggcaataatattaaatcacatatttaatattat 28392614  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  28392615 aaacagtgaacggtatctagcaacacatcactgctacccaagt 28392657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 8859221 - 8859091
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8859221 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 8859122  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  8859121 accttacggtggaccgcgtttctctattttt 8859091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 10627796 - 10627935
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||    
T  10627796 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttgacaataatatta---cacatatttaatattat 10627892  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10627893 aaacagtgagcggtatctagcaacacatcactgctacccaagt 10627935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 185 - 321
Target Start/End: Complemental strand, 35224378 - 35224242
Alignment:
Q  185 cttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacag 284  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35224378 cttatttatttctctcatctatttgtcctttgtgtgtgaccatataggttctcgttacgttggcaataatattaaatcacatatttaatattataaacag 35224279  T
Q  285 tgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||    
T  35224278 tgagcggtatctagcaacacatcactgctacccaagt 35224242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 8846029 - 8845887
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8846029 gtcttacttatttatttctctcatctatatgtactttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaataacatatttaatattat 8845930  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||| ||||||||||||||||||||| ||||||||||    
T  8845929 aaacagtgagtggtatctagcaacacatcactactacccaagt 8845887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 19919684 - 19919814
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19919684 ttaggttaagcactcacaaaaaggtagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 19919783  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    | |||||||||||||||||||||||||||||    
T  19919784 atcttacggtgaaccgcgtttctctattttt 19919814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 19925913 - 19926043
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19925913 ttaggttaagcactcacaaaaaggtagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 19926012  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    | |||||||||||||||||||||||||||||    
T  19926013 atcttacggtgaaccgcgtttctctattttt 19926043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 55613738 - 55613614
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  55613738 ttaggttaagcactcacaaaaagtaagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 55613639  T
Q  101 accttacggtgaaccgcgtttctct 125  Q
    |||||||||||||||||||||||||    
T  55613638 accttacggtgaaccgcgtttctct 55613614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 869650 - 869520
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  869650 ttaggttaagcactcacaaaaggttagtaatgtttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 869551  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  869550 accttacggtggaccgcgtttctctattttt 869520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 5667511 - 5667653
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  5667511 gtcttacttatttacttctcgcatctatctgtcctttgtgtgtgaccctataggttctcgtaacgttgacaataatattgaatcacatatttaatattat 5667610  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  5667611 aaacagtgagcggtacctagcaacacatcactgctacccaagt 5667653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18270102 - 18269972
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18270102 ttaggttaagcactcacaaaaagttagtcatgtttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 18270003  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  18270002 accttacggtggaccgcgtttctctattttt 18269972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 28392320 - 28392450
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |    
T  28392320 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaccgt 28392419  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  28392420 accttacggtggaccgcgtttctctattttt 28392450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 26971494 - 26971363
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  26971494 ttaggttaagcactcacaaaaagttagtaatgtttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 26971395  T
Q  101 accttacggtgaaccgcg-tttctctattttt 131  Q
    ||||||||||| |||||| |||||||||||||    
T  26971394 accttacggtggaccgcgttttctctattttt 26971363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 4425793 - 4425923
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |    
T  4425793 ttaggttaagcacttacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaccgt 4425892  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  4425893 accttacggtggaccgcgtttctctattttt 4425923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 4425996 - 4426138
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4425996 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttctcgtaacgttggcaataatattaaatcacatatttaatattat 4426095  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||| ||||  ||||||| |||||||||||| ||||| ||||    
T  4426096 aaacaatgagtagtatctaacaacacatcactactacctaagt 4426138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 5708366 - 5708236
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  5708366 ttaggttaagcactcacaaaaggttagtaatgtttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacactgt 5708267  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  5708266 accttacggtggaccgcgtttctctattttt 5708236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18263241 - 18263111
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  18263241 ttaggttaagcactcacaaaaagttagtcatgtttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacactgt 18263142  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  18263141 accttacggtggaccgcgtttctctattttt 18263111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 10620486 - 10620616
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |    
T  10620486 ttaggtcaagcactcacaaaaagtcagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaccgt 10620585  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  10620586 accttacggtggaccgcgtttctctattttt 10620616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 10627568 - 10627698
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |    
T  10627568 ttaggtcaagcactcacaaaaagtcagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaccgt 10627667  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  10627668 accttacggtggaccgcgtttctctattttt 10627698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 5715002 - 5714871
Alignment:
Q  1 ttaggttaagcactca-caaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacacca 99  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  5715002 ttaggttaagcactcaacaaaaggttagtaatgtttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacactg 5714903  T
Q  100 taccttacggtgaaccgcgtttctctattttt 131  Q
    |||||||||||| |||||||||||||||||||    
T  5714902 taccttacggtggaccgcgtttctctattttt 5714871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 8846232 - 8846102
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | |    
T  8846232 ttaggttaagcactcacaaaaagttagtaatgcttcaatacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacatcgt 8846133  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    |||||||| || |||||||||||||||||||    
T  8846132 accttacgttggaccgcgtttctctattttt 8846102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 10676960 - 10677100
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||| ||| |||||||||||  ||||||| || ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  10676960 gtctaacttatttatttctctcatttatttgtcctttgtg--tgaccctctaagtttccgtaacgttgacaataatattaaatcacatatttaatattat 10677057  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  10677058 aaacagtgagcggtatctagcaacacatcactgctatccaagt 10677100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 10890600 - 10890740
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||| ||| |||||||||||  ||||||| || ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  10890600 gtctaacttatttatttctctcatttatttgtcctttgtg--tgaccctctaagtttccgtaacgttgacaataatattaaatcacatatttaatattat 10890697  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  10890698 aaacagtgagcggtatctagcaacacatcactgctatccaagt 10890740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 10690103 - 10689963
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||| | ||| |||| ||||||||  ||||| || |||||||||||| || |||||||||| ||||||||||||||||||||    
T  10690103 gtcttacttatttatttctctcgtttatttgtcttttgtgtg--accctgtaagttcccgtaacgctgacaataatatttaatcacatatttaatattat 10690006  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10690005 aaacagtgagcggtatctagcaacacatcactgctacccaagt 10689963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 10903743 - 10903603
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||| | ||| |||| ||||||||  ||||| || |||||||||||| || |||||||||| ||||||||||||||||||||    
T  10903743 gtcttacttatttatttctctcgtttatttgtcttttgtgtg--accctgtaagttcccgtaacgctgacaataatatttaatcacatatttaatattat 10903646  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10903645 aaacagtgagcggtatctagcaacacatcactgctacccaagt 10903603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 15462218 - 15462104
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||||||||||   || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  15462218 ctgttctttgtgtgtgaccctataggttttagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 15462119  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  15462118 cattgctacccaagt 15462104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 28917360 - 28917474
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || |||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||    
T  28917360 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatatgatatttaatattataaacaatgagcggtatctagcaacacat 28917459  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  28917460 cattgctacccaagt 28917474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 34976264 - 34976155
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| |||||||||| ||    
T  34976264 ctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctaacaacacatcattg 34976165  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  34976164 ctacccaagt 34976155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 1942407 - 1942293
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || |||||| |||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  1942407 ctgttctttgtgtgtgaccctataggttctagtcacgttgacaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacat 1942308  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  1942307 cattgctacccaagt 1942293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 2677729 - 2677615
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  2677729 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 2677630  T
Q  307 cactgctacccaagt 321  Q
    ||  |||||||||||    
T  2677629 catggctacccaagt 2677615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 26532330 - 26532215
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcaca-tatttaatattataaacagtgagcggtatctagcaacaca 305  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||    
T  26532330 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatcttaatatttaatattataaacaatgagcggtatctagcaacaca 26532231  T
Q  306 tcactgctacccaagt 321  Q
    ||| ||||||||||||    
T  26532230 tcattgctacccaagt 26532215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 47388330 - 47388412
Alignment:
Q  184 acttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat 266  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  47388330 acttatttatttctctcatctatctgtcatttgtgtgtgaccctataggttaccgtaacgttgacaataatattaaatcacat 47388412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 15815732 - 15815623
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||| ||    
T  15815732 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatatcataaacaatgagcggtatctagcaacacatcattg 15815633  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  15815632 ctacccaagt 15815623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 9488253 - 9488151
Alignment:
Q  219 tgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctaccca 318  Q
    |||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||    
T  9488253 tgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcagtatctagcaacacatcattgctatcca 9488154  T
Q  319 agt 321  Q
    |||    
T  9488153 agt 9488151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 5871128 - 5871019
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  5871128 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 5871029  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  5871028 ctacccaagt 5871019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 17299550 - 17299659
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  17299550 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 17299649  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  17299650 ctacccaagt 17299659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 18110634 - 18110743
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  18110634 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 18110733  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  18110734 ctacccaagt 18110743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 19363121 - 19363013
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    ||||||| ||||||||||| |||  |  ||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  19363121 tttgtgtatgaccctatagattctagccacgttggcaataatattaaatctaatatttaacattataaatagtgagcggtatctagcaacacatcactgc 19363022  T
Q  313 tacccaagt 321  Q
    || ||||||    
T  19363021 tatccaagt 19363013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 4546780 - 4546666
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||| || |||||||||  || ||||||| ||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  4546780 ctgttctttgtgtgtggccttataggttctagtcacgttggaaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacat 4546681  T
Q  307 cactgctacccaagt 321  Q
    || ||||| ||||||    
T  4546680 cattgctatccaagt 4546666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 4675569 - 4675683
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  4675569 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 4675668  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  4675669 cattgctacccaagt 4675683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 5667248 - 5667354
Alignment:
Q  3 aggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaatacaccata 101  Q
    |||||||||||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||| ||||||| |||||| ||    
T  5667248 aggttaagcactcacaaaaaatatgtaatgcttcagcacaagggttctatttatagaatcacttgtgtggtcagcaagccaagcacttaagtacaccgta 5667347  T
Q  102 ccttacg 108  Q
    |||||||    
T  5667348 ccttacg 5667354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 18163878 - 18163764
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  18163878 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 18163779  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  18163778 cattgctacccaagt 18163764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 20244653 - 20244539
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  20244653 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 20244554  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  20244553 cattgctacccaagt 20244539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 19374057 - 19373949
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    ||||||| ||||||||||| |||  |  |||||  |||||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  19374057 tttgtgtatgaccctatagattcttgccacgttaacaataatattaaatcctatatttaatattataaatagtgagcgatatctagcaacacatcactgc 19373958  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  19373957 tacccaagt 19373949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 5617105 - 5616999
Alignment:
Q  214 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 313  Q
    |||||||||||| |||||||||  |||||  || |||||||||||||||  |||||||||||||||||||||||   |||||||||||||||||||||||    
T  5617105 ttgtgtgtgaccttataggttcttgtaacagtgacaataatattaaatcttatatttaatattataaacagtga-ttgtatctagcaacacatcactgct 5617007  T
Q  314 acccaagt 321  Q
    ||||||||    
T  5617006 acccaagt 5616999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 3368614 - 3368723
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||| ||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||| ||||| ||    
T  3368614 ctttgtgtgtaaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacgcatcattg 3368713  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  3368714 ctacccaagt 3368723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 310
Target Start/End: Original strand, 5524582 - 5524678
Alignment:
Q  214 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcact 310  Q
    ||||||||| || |||||||||  |||| ||||||||||||||||||||   |||||||||||||||| |||||||||||||||| |||||||||||    
T  5524582 ttgtgtgtgtccttataggttcttgtaatgttggcaataatattaaatcttgtatttaatattataaatagtgagcggtatctagtaacacatcact 5524678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 11421698 - 11421590
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    |||||||||||||| ||||||||  || |||||| |||||||||||||||   ||||||||||||||||||||||   |||| ||||||||||||| |||    
T  11421698 tttgtgtgtgaccccataggttctagtcacgttgccaataatattaaatctagtatttaatattataaacagtgatatgtatttagcaacacatcattgc 11421599  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  11421598 tacccaagt 11421590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 217 - 321
Target Start/End: Original strand, 30040084 - 30040188
Alignment:
Q  217 tgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacc 316  Q
    |||||||||||||||||||  || || |||||||||||||||| ||  |||||||||| |||||||| |||| ||||||||||||||||||| ||||| |    
T  30040084 tgtgtgaccctataggttctagtcacattggcaataatattaagtctaatatttaatactataaacaatgagtggtatctagcaacacatcattgctatc 30040183  T
Q  317 caagt 321  Q
    |||||    
T  30040184 caagt 30040188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 9538669 - 9538562
Alignment:
Q  214 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 313  Q
    ||||||||||||||||| ||||   | | ||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||| ||||||| |    
T  9538669 ttgtgtgtgaccctatatgttcttttcaagttggcaataatattaaatcttgtatttaatattataaacaatgagcggtatctagcaacagatcactgtt 9538570  T
Q  314 acccaagt 321  Q
    | ||||||    
T  9538569 atccaagt 9538562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 24701763 - 24701686
Alignment:
Q  244 ttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||| ||||||||||||||| | |||||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  24701763 ttggaaataatattaaatcaaacatttaatattataaacagtgagtggtatctaacaacacatcactgctatccaagt 24701686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 32637195 - 32637087
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    ||||| ||||||||| |||| ||  || | ||||||||||||||||||||  ||||||||||||||||||| || ||| ||||||||||||||||||| |    
T  32637195 tttgtttgtgaccctgtaggatcttgtcatgttggcaataatattaaatcttatatttaatattataaacaatgggcgatatctagcaacacatcactac 32637096  T
Q  313 tacccaagt 321  Q
    |||| ||||    
T  32637095 tacctaagt 32637087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 35224553 - 35224456
Alignment:
Q  34 ttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaatacaccataccttacggtgaaccgcgtttctctatttt 130  Q
    |||| |||||||||||||||||||||| ||||||||||  ||  ||| ||| ||||||| |||||| |||||||||||| ||||||||||||||||||    
T  35224553 ttcagcacaagggttctatttatagaaccacttgtgtgctcataaagtcaagcacttaagtacaccgtaccttacggtggaccgcgtttctctatttt 35224456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 47388108 - 47388215
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaatacacca 99  Q
    ||||||||||||||||  |||||| ||||||| |||| ||||| ||||||||||||  ||||||||||||||  | |||| ||| ||||||| ||||||     
T  47388108 ttaggttaagcactcaacaaaagtcagtaatgtttcagcacaatggttctatttatcaaatcacttgtgtggtgagcaagccaagcacttaagtacaccg 47388207  T
Q  100 taccttac 107  Q
    ||||||||    
T  47388208 taccttac 47388215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 309
Target Start/End: Original strand, 24699667 - 24699766
Alignment:
Q  210 tcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcac 309  Q
    |||||||||||||||| | |||||||  ||||| |||  |||| || |||||   ||||||||||||||||| | |||  ||||||||||||||||||||    
T  24699667 tcctttgtgtgtgaccatgtaggttcttgtaacattgataatactaataaattttatatttaatattataaataatgactggtatctagcaacacatcac 24699766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 283
Target Start/End: Original strand, 23055635 - 23055723
Alignment:
Q  193 tttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    ||||||| || ||||||| || |||||||  |||||||||||||||| | ||| | ||||||||||||||| ||| |||||||||||||||    
T  23055635 tttctcttatttatctgttctatgtgtgtc-ccctataggttcccgtcatgttagtaataatattaaatcatata-ttaatattataaaca 23055723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 9937429 - 9937505
Alignment:
Q  229 taggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacaca 305  Q
    ||||||| ||| | |||| |||||||||||||| |||| |||||||||||||||| |||| | ||||| | ||||||    
T  9937429 taggttctcgttatgttgacaataatattaaataacatctttaatattataaacaatgagtgatatcttgtaacaca 9937505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 10676769 - 10676821
Alignment:
Q  45 ggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaataca 96  Q
    |||||||||||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  10676769 ggttctatttatagaaccacttgtgtggtcaacaagccaagcacttaaataca 10676821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 10890409 - 10890461
Alignment:
Q  45 ggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaataca 96  Q
    |||||||||||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  10890409 ggttctatttatagaaccacttgtgtggtcaacaagccaagcacttaaataca 10890461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 11483390 - 11483442
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaa 259  Q
    |||| |||||||||||||||| |||||||  || |||||||||||||||||||    
T  11483390 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaa 11483442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 36093023 - 36092972
Alignment:
Q  229 taggttcccgtaacgttggcaataatattaaatcacatatttaatattataa 280  Q
    ||||||| | ||||||| ||||||||||||||||||||||  ||||||||||    
T  36093023 taggttctcataacgtttgcaataatattaaatcacatatgaaatattataa 36092972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 272
Target Start/End: Complemental strand, 22805879 - 22805837
Alignment:
Q  230 aggttcccgtaacgttggcaataatattaaatcacatatttaa 272  Q
    |||||| |||||||||| |||||||||||||||| ||||||||    
T  22805879 aggttctcgtaacgttgacaataatattaaatcaaatatttaa 22805837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 10690312 - 10690247
Alignment:
Q  29 aatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaat 93  Q
    ||||||| | |||||||||||||||  ||||| ||||||||||| ||||||| ||| |||||||||    
T  10690312 aatgctttagcacaagggttctattattagaaccacttgtgtggtcaacaagccaagcacttaaat 10690247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 10903952 - 10903887
Alignment:
Q  29 aatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaat 93  Q
    ||||||| | |||||||||||||||  ||||| ||||||||||| ||||||| ||| |||||||||    
T  10903952 aatgctttagcacaagggttctattattagaaccacttgtgtggtcaacaagccaagcacttaaat 10903887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 469237 - 469193
Alignment:
Q  264 catatttaatattataaacagtgagcggtatctagcaacacatca 308  Q
    ||||||||||||| |||| |||||| | |||||||||||||||||    
T  469237 catatttaatattttaaatagtgagagatatctagcaacacatca 469193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 139; Significance: 1e-72; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 6110890 - 6110748
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110890 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 6110791  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6110790 aaacagtgagcggtatctagcaacacatcactgctacccaagt 6110748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 8491321 - 8491179
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8491321 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 8491222  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8491221 aaacagtgagcggtatctagcaacacatcactgctacccaagt 8491179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 10571973 - 10572115
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10571973 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 10572072  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10572073 aaacagtgagcggtatctagcaacacatcactgctacccaagt 10572115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 10578737 - 10578879
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10578737 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 10578836  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10578837 aaacagtgagcggtatctagcaacacatcactgctacccaagt 10578879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 15600265 - 15600407
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600265 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 15600364  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15600365 aaacagtgagcggtatctagcaacacatcactgctacccaagt 15600407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 15606810 - 15606952
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15606810 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 15606909  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15606910 aaacagtgagcggtatctagcaacacatcactgctacccaagt 15606952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 13212128 - 13211986
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13212128 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattacatcacatatttaatattat 13212029  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13212028 aaacagtgagcggtatctagcaacacatcactgctacccaagt 13211986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 16481864 - 16482006
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16481864 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 16481963  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  16481964 aaacagtgagcggtatcaagcaacacatcactgctacccaagt 16482006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 17780499 - 17780641
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17780499 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggaaataatattaaatcacatatttaatattat 17780598  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17780599 aaacagtgagcggtatctagcaacacatcactgctacccaagt 17780641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 15356967 - 15357109
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  15356967 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataataataaatcacatatttagtattat 15357066  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15357067 aaacagtgagcggtatctagcaacacatcactgctacccaagt 15357109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 10578510 - 10578642
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10578510 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 10578609  T
Q  101 accttacggtgaaccgcgtttctctatttttgg 133  Q
    |||||||||||||||||||||||||||||||||    
T  10578610 accttacggtgaaccgcgtttctctatttttgg 10578642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 17137179 - 17137037
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17137179 gtcttacttatttatttctctcatctatcttttctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacacatttaatattat 17137080  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17137079 aaacagtgagcggtatctagcaacacatcactgctacccaagt 17137037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 184 - 321
Target Start/End: Complemental strand, 13517628 - 13517491
Alignment:
Q  184 acttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13517628 acttatttatttctttcatctatctgtcctttgtgtgtgaccctataggttcccgtaatgttggcaataatattaaatcacatatttaatattataaaca 13517529  T
Q  284 gtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  13517528 gtgagtggtatctagcaacacatcactgctacccaagt 13517491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 10571744 - 10571874
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  10571744 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacactgt 10571843  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    |||||||||||||||||||||||||||||||    
T  10571844 accttacggtgaaccgcgtttctctattttt 10571874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 15341397 - 15341527
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15341397 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 15341496  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  15341497 accttacggtggaccgcgtttctctattttt 15341527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 15341600 - 15341742
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  15341600 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataataataaatcacatatttagtattat 15341699  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||| |||||| |||||||||||||    
T  15341700 aaacagtgagcggtatctagcaccacatcgctgctacccaagt 15341742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 15600062 - 15600192
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600062 ttaggttaagcactcacaaaaagttagtaatgtttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 15600161  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  15600162 accttacggtggaccgcgtttctctattttt 15600192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 15606607 - 15606737
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15606607 ttaggttaagcactcacaaaaagttagtaatgtttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 15606706  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  15606707 accttacggtggaccgcgtttctctattttt 15606737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 1646902 - 1647044
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1646902 gtcttacttatttatttctctcatttatctgtccttagtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 1647001  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||  |||||||||||||| |||||||||||||||    
T  1647002 aaacagtgagcattatctagcaacacaacactgctacccaagt 1647044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 15356764 - 15356894
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  15356764 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacaattaaatacaccgt 15356863  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  15356864 accttacggtggaccgcgtttctctattttt 15356894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 17780296 - 17780426
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  17780296 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcaacaagacaacacttaaatacaccgt 17780395  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  17780396 accttacggtggaccgcgtttctctattttt 17780426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 19081597 - 19081727
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  19081597 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcaacaagacaacacttaaatacaccgt 19081696  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  19081697 accttacggtggaccgcgtttctctattttt 19081727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 16481635 - 16481759
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16481635 ttaggttaagcactcacaaaaagtaagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 16481734  T
Q  101 accttacggtgaaccgcgtttctct 125  Q
    |||||||||||||||||||||||||    
T  16481735 accttacggtgaaccgcgtttctct 16481759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 23014741 - 23014883
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  23014741 gtcttacttatttatttctctcatctatctgtcatttgtatgtgaccctataggttctcgtaacgttggcaataatattaaatcacgtatttaatattat 23014840  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    | |||||||||||||||||||||||||||||||||| ||||||    
T  23014841 agacagtgagcggtatctagcaacacatcactgctaaccaagt 23014883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 1646674 - 1646804
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| |    
T  1646674 ttaggttaagcactcacaaaaaattagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatgcaccgt 1646773  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  1646774 accttacggtggaccgcgtttctctattttt 1646804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 17137408 - 17137277
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcac-ttgtgtggacaacaagacaacacttaaatacacca 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||     
T  17137408 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttataaaatcactttgtgtggtcagcaagacaacacttaaatacaccg 17137309  T
Q  100 taccttacggtgaaccgcgtttctctattttt 131  Q
    |||||||||||| |||||||||||||||||||    
T  17137308 taccttacggtggaccgcgtttctctattttt 17137277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 6111092 - 6110986
Alignment:
Q  27 gtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccataccttacggtgaaccgcgtttctcta 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6111092 gtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgtaccttacggtgaaccgcgtttctcta 6110993  T
Q  127 tttttgg 133  Q
    |||||||    
T  6110992 tttttgg 6110986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 17197160 - 17197278
Alignment:
Q  203 ctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaac 302  Q
    |||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  17197160 ctatctgtcctttgtgtgtgaccctatatgttctcgtaacgttgacaataatattaaatcacatatttaatattataaaaagtgagtggtatctagcaac 17197259  T
Q  303 acatcactgctacccaagt 321  Q
    |||||||||||||||||||    
T  17197260 acatcactgctacccaagt 17197278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 17196930 - 17197056
Alignment:
Q  5 gttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccatacct 104  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||  |||||    
T  17196930 gttaagcacaaacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtctggtcagcaagacaacacttaaatacacagtacct 17197029  T
Q  105 tacggtgaaccgcgtttctctattttt 131  Q
    ||||||| |||||||||||||||||||    
T  17197030 tacggtggaccgcgtttctctattttt 17197056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 13212330 - 13212227
Alignment:
Q  28 taatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccataccttacggtgaaccgcgtttctctat 127  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  13212330 taatgcttcaacacaagggttctatttatagaatcacttgtgtgaacaacaagacaacacttaaatacaccgtaccttacggtggaccgcgtttctctat 13212231  T
Q  128 tttt 131  Q
    ||||    
T  13212230 tttt 13212227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 32056223 - 32056353
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||  |    
T  32056223 ttaggttaagcaatcacaaaaagttagtaatgcttgaacacaagggttctatttatagaatcacttgtgtgatcagcaagacaacacttaaatacactgt 32056322  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||| ||| || ||||||||||||||||    
T  32056323 accttacagtggactgcgtttctctattttt 32056353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13517838 - 13517708
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||| ||||||||||  |||||||| |||||||||||||||||||||||||||||||  |||||||||| || ||| |||||||||||||||||| |    
T  13517838 ttaggtttagcactcacattaagttagtcatgcttcaacacaagggttctatttatagaaatacttgtgtggtcagcaaaacaacacttaaatacaccgt 13517739  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  13517738 accttacggtggaccgcgtttctctattttt 13517708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 18538024 - 18537895
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||||||| |||  |||||||||| |||||| |||||||||||||||||||||||| || || ||||||||||||||| |||||  |    
T  18538024 ttaggttaagcactcacaaaaggttcataatgcttcagcacaagagttctatttatagaatcacttgtgcggtcagcaagacaacacttaactacactgt 18537925  T
Q  101 accttacggtgaaccgcgtttctctatttt 130  Q
    ||||||||||||||||||||||||||||||    
T  18537924 accttacggtgaaccgcgtttctctatttt 18537895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 21034955 - 21034841
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  21034955 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 21034856  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  21034855 cattgctacccaagt 21034841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 21399509 - 21399395
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  21399509 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 21399410  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  21399409 cattgctacccaagt 21399395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 15846121 - 15846235
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || | ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  15846121 ctgttctttgtgtgtgaccctataggttctagtcatgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 15846220  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  15846221 cattgctacccaagt 15846235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 15316760 - 15316874
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  |||||||||| |||||| | ||||||||||||||||||||||    
T  15316760 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatactataaataatgagcggtatctagcaacacat 15316859  T
Q  307 cactgctacccaagt 321  Q
    || |||||| |||||    
T  15316860 cattgctacacaagt 15316874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 25978312 - 25978426
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  25978312 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacat 25978411  T
Q  307 cactgctacccaagt 321  Q
    || ||  ||||||||    
T  25978412 cattgtcacccaagt 25978426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 28088823 - 28088709
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  |||||||||  |||||| ||| ||||||||||||||||||||    
T  28088823 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatgctataaatagtaagcggtatctagcaacacat 28088724  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  28088723 cattgctacccaagt 28088709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 323
Target Start/End: Complemental strand, 15538247 - 15538137
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    ||||||||||||||||||| |||  |  || |||||||||||||||||||  ||||| ||||||||||| |||||||||||||||||||||||||||| |    
T  15538247 tttgtgtgtgaccctatagtttcttgccacattggcaataatattaaatcttatattcaatattataaaaagtgagcggtatctagcaacacatcactac 15538148  T
Q  313 tacccaagtaa 323  Q
    |||||||||||    
T  15538147 tacccaagtaa 15538137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 12300621 - 12300512
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  12300621 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 12300522  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  12300521 ctacccaagt 12300512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 19081800 - 19081867
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttg 246  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19081800 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttg 19081867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 20147145 - 20147254
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 310  Q
    |||||||||||||||| |||||||  || ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |    
T  20147145 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcaacacatcatt 20147243  T
Q  311 gctacccaagt 321  Q
    |||||||||||    
T  20147244 gctacccaagt 20147254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 55427737 - 55427623
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  55427737 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 55427638  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  55427637 cattgctacccaagt 55427623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 23014537 - 23014651
Alignment:
Q  17 caaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccataccttacggtgaaccg 116  Q
    |||||||||| |||||||||| |||||||||||||||||||||| ||||||||||| || |||   | |||||||||||| |||||||||| ||  || |    
T  23014537 caaaaagttactaatgcttcagcacaagggttctatttatagaaccacttgtgtggtcagcaaccaaccacttaaatacatcataccttacagtagactg 23014636  T
Q  117 cgtttctctattttt 131  Q
    |||||||||||||||    
T  23014637 cgtttctctattttt 23014651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 218 - 321
Target Start/End: Complemental strand, 26816998 - 26816895
Alignment:
Q  218 gtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctaccc 317  Q
    ||||||||||||| ||||  |  |||||| ||| |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| |||||||     
T  26816998 gtgtgaccctataagttcttgccacgttgacaacaatattaaatcttatatttaatattataaacaatgagcggtatctagcaacacatcattgctacca 26816899  T
Q  318 aagt 321  Q
    ||||    
T  26816898 aagt 26816895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 14147723 - 14147623
Alignment:
Q  221 tgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaag 320  Q
    |||||||||| ||||  || |||||| ||||||||||||||   ||||||||||||||||||| |||||  ||||||||| ||||||| |||||||||||    
T  14147723 tgaccctatatgttctagtcacgttgacaataatattaaatttaatatttaatattataaacaatgagcaatatctagcatcacatcattgctacccaag 14147624  T
Q  321 t 321  Q
    |    
T  14147623 t 14147623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 18520711 - 18520659
Alignment:
Q  269 ttaatattataaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18520711 ttaatattataaacagggagcggtatctagcaacacatcactgctacccaagt 18520659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 25801043 - 25800965
Alignment:
Q  241 acgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaa 319  Q
    |||||| ||||||||||||||||||||| | |||| |||||| |||| || ||| ||||||||||||||||||||||||    
T  25801043 acgttgacaataatattaaatcacatatgtgatataataaacggtgaacgatatttagcaacacatcactgctacccaa 25800965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 321
Target Start/End: Complemental strand, 9505095 - 9504990
Alignment:
Q  217 tgtgtgaccctataggttcc-cgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctac 315  Q
    ||||||||| | |||||| | ||||| |||| ||||||||||||||||||||||||| ||||||| ||  ||||  ||| ||||||||||||| ||||||    
T  9505095 tgtgtgaccttgtaggtttctcgtaatgttgacaataatattaaatcacatatttaaaattataatcatggagcaatatgtagcaacacatcagtgctac 9504996  T
Q  316 ccaagt 321  Q
    ||||||    
T  9504995 ccaagt 9504990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 35199028 - 35199126
Alignment:
Q  184 acttatttattt--ctctcatctatctgtcctt-tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattata 279  Q
    ||||||||||||  ||||||| ||||| ||||| ||||| ||  | |||| ||||  |||||||||||||||||||||||||| |||||||||||||||    
T  35199028 acttatttatttaactctcatttatctatccttatgtgtatgctcttatatgttcttgtaacgttggcaataatattaaatcatatatttaatattata 35199126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 11788260 - 11788191
Alignment:
Q  252 aatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||| ||||  |||||||||| |||||||| |||||| ||||||||||||||| | ||||||||||||    
T  11788260 aatattgaatctaatatttaatactataaacaatgagcgatatctagcaacacattattgctacccaagt 11788191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 29925747 - 29925697
Alignment:
Q  238 gtaacgttggcaataatattaaatcacatatttaatattataaacagtgag 288  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||| ||||    
T  29925747 gtaacattgacaatgatattaaatcacatatttaatattataaacattgag 29925697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 29974901 - 29974851
Alignment:
Q  238 gtaacgttggcaataatattaaatcacatatttaatattataaacagtgag 288  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||| ||||    
T  29974901 gtaacattgacaatgatattaaatcacatatttaatattataaacattgag 29974851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 16201221 - 16201136
Alignment:
Q  28 taatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaa-tacaccataccttacggtg 111  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||| ||  ||| ||| |||||||| |||||| |||| |||||||    
T  16201221 taatacttcagcacaagggttcaatttatagaatcacttgtgtggtcagtaagtcaagcacttaaagtacaccgtaccatacggtg 16201136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 32056418 - 32056459
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtg 220  Q
    |||| |||||||||||||||||||||||||||||||| ||||    
T  32056418 gtcttacttatttatttctctcatctatctgtcctttatgtg 32056459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 9250146 - 9250189
Alignment:
Q  240 aacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||    
T  9250146 aacgttgacaataatattaaataacacatttaatattataaaca 9250189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 35543618 - 35543545
Alignment:
Q  216 gtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcaca-tatttaatattataaacagtgag 288  Q
    |||||||||| | ||||||| ||||| |||| |||||||||||| | ||| | |||||||||||||| ||||||    
T  35543618 gtgtgtgaccttgtaggttcacgtaatgttgacaataatattaagttacactgtttaatattataaatagtgag 35543545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 16201008 - 16200972
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtccttt 215  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  16201008 gtcttacttatttatttctctcatctatttgtccttt 16200972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 1e-72; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 18252856 - 18252714
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252856 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 18252757  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18252756 aaacagtgagcggtatctagcaacacatcactgctacccaagt 18252714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 27309963 - 27310100
Alignment:
Q  184 acttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27309963 acttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 27310062  T
Q  284 gtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27310063 gtgagcggtatctagcaacacatcactgctacccaagt 27310100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 18531895 - 18532037
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18531895 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 18531994  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  18531995 aaacagtgagcggtatctagcaacacatcactgctacctaagt 18532037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 27130791 - 27130933
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27130791 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccataacgttggcaataatattaaatcacatatttaatattat 27130890  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27130891 aaacagtgagcggtatctagcaacacatcactgctacccaagt 27130933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18253059 - 18252929
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18253059 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 18252960  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  18252959 accttacggtggaccgcgtttctctattttt 18252929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 16358416 - 16358558
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  16358416 gtcttacttacttatttctctcatctatctgtcctttgtttgtgaccctataggttcccgtaacgttggcaataatattaaatctcatatttaatactat 16358515  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  16358516 aaacagtgagcgatatctagcaacacatcactgctatccaagt 16358558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 27276946 - 27277083
Alignment:
Q  184 acttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  27276946 acttatttatttcactcatctatctgtcatttgtgtgtgaccctataagttctcgtaacgttgacaataatattaaatcacatatttaatattataaaca 27277045  T
Q  284 gtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  27277046 gtgagcggtatctagtaacacatcactcctacccaagt 27277083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 22641268 - 22641407
Alignment:
Q  184 acttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  22641268 acttatttatttctctcatctatctgtactttgtgtgtgaccctataggttctcgtaacgttggcaataatatgaaatcacatgtttaatattataaaca 22641367  T
Q  284 gtgagcggtatctagcaacacatcactgctacccaagtaa 323  Q
    ||||||| ||||| |||| ||||| |||||||||||||||    
T  22641368 gtgagcgatatctcgcaaaacatcgctgctacccaagtaa 22641407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 27130562 - 27130692
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |    
T  27130562 ttaggttaagcacttacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaccgt 27130661  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||  |||||||||||||||||||    
T  27130662 accttacggtagaccgcgtttctctattttt 27130692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 36816016 - 36816158
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||    
T  36816016 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctatagattcccgtaacattgacaataatattaaatcacatatttaatattat 36816115  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||  ||||||||||||||||| || ||| |||||    
T  36816116 aaacagtgagcaatatctagcaacacatcaatgttactcaagt 36816158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 9076055 - 9076185
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| || |||||||||||||||||||| |||    
T  9076055 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcgtttgtgtggtcagcaagacaacacttaaatacagcat 9076154  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| | |||||||||||||||||    
T  9076155 accttacggtggatcgcgtttctctattttt 9076185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 18531691 - 18531822
Alignment:
Q  1 ttaggttaagcactcacaaaaag-ttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacacca 99  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||      
T  18531691 ttaggttaagcactcacaaaaaggttcgtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacactg 18531790  T
Q  100 taccttacggtgaaccgcgtttctctattttt 131  Q
    |||||||||||| |||||||||||||||||||    
T  18531791 taccttacggtggaccgcgtttctctattttt 18531822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 16358213 - 16358343
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||   |    
T  16358213 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcatttgtgtggtcagcaagacaacacttaaatacattgt 16358312  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||| ||||||||    
T  16358313 accttacggtggaccgcgtttccctattttt 16358343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 27309731 - 27309860
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  | |||||||||||||||||||| | |    
T  27309731 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagg-ttctatttatagaatcacttgtgtggttagcaagacaacacttaaatacatcgt 27309829  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  27309830 accttacggtggaccgcgtttctctattttt 27309860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 19706024 - 19706138
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  19706024 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 19706123  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  19706124 cattgctacccaagt 19706138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 28134308 - 28134422
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  28134308 ctgttctttgtgtgtgaccctataggttctggtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 28134407  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  28134408 cattgctacccaagt 28134422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 9456832 - 9456718
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  9456832 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 9456733  T
Q  307 cactgctacccaagt 321  Q
    ||  |||||||||||    
T  9456732 catggctacccaagt 9456718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 9460928 - 9460814
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  9460928 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 9460829  T
Q  307 cactgctacccaagt 321  Q
    ||  |||||||||||    
T  9460828 catggctacccaagt 9460814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 20779231 - 20779345
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  20779231 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 20779330  T
Q  307 cactgctacccaagt 321  Q
    ||  |||||||||||    
T  20779331 catggctacccaagt 20779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 22613208 - 22613095
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||    
T  22613208 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatattta-tattataaacaatgagcggtatctagcaacacat 22613110  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  22613109 cattgctacccaagt 22613095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 47667070 - 47667184
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||||    
T  47667070 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaattctgatatttaatattataaacaatgagcggtatctagcaacacat 47667169  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  47667170 cattgctacccaagt 47667184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 33283447 - 33283556
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| ||    
T  33283447 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacatcattg 33283546  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  33283547 ctacccaagt 33283556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 43801950 - 43802064
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||| ||||||||  || |||||||||||||||||||||   |||||||| |||||||||| |||||||||||||| |||||||    
T  43801950 ctgttctttgtgtgtgacccaataggttctagtcacgttggcaataatattaaatatgatatttaaaattataaacaatgagcggtatctagtaacacat 43802049  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  43802050 cattgctacccaagt 43802064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 35936036 - 35935927
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||| |||||||||||  || ||||||||||||||||||||||  |||||||||| |||||||| ||| |||||||||||||||||||| ||    
T  35936036 ctttgtgtgtgatcctataggttctagtcacgttggcaataatattaaatctaatatttaataatataaacaatgaacggtatctagcaacacatcattg 35935937  T
Q  312 ctacccaagt 321  Q
     |||||||||    
T  35935936 ttacccaagt 35935927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 8728374 - 8728266
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    |||||||||||||| ||| ||||  || || |||||||||||||||||||  ||||||||||||||||||||||||| |||||||| ||||||||| |||    
T  8728374 tttgtgtgtgaccccataagttctagtcacattggcaataatattaaatctaatatttaatattataaacagtgagcagtatctaggaacacatcattgc 8728275  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  8728274 tacccaagt 8728266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 14482606 - 14482492
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  14482606 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 14482507  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  14482506 cattgctacccaagt 14482492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 22669848 - 22669957
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 310  Q
    |||||||||||||||| |||||||  || ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |    
T  22669848 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcaacacatcatt 22669946  T
Q  311 gctacccaagt 321  Q
    |||||||||||    
T  22669947 gctacccaagt 22669957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 217 - 321
Target Start/End: Complemental strand, 634645 - 634542
Alignment:
Q  217 tgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacc 316  Q
    |||||||||||||||||||  || ||||||||||||||||||||||  ||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  634645 tgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatt-aatactataaacaatgagcggtatctagcaacacatcattgctacc 634547  T
Q  317 caagt 321  Q
     ||||    
T  634546 aaagt 634542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 36815775 - 36815882
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaatacacca 99  Q
    ||||||||||||||||||| ||||  || ||||||||||||||||||||||||||||||||||||||||||| || |||| ||| ||||| | ||||||     
T  36815775 ttaggttaagcactcacaagaagtctgtcatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagccaagcactttagtacaccg 36815874  T
Q  100 taccttac 107  Q
    ||||||||    
T  36815875 taccttac 36815882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 188 - 321
Target Start/End: Original strand, 31234313 - 31234447
Alignment:
Q  188 atttatttctctcatctatctgtccttt-gtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtg 286  Q
    ||||||||||||||| || ||||| ||| |||||||||||| ||||||   || |||||| |||||| |||||||   |||||||||||||||||| |||    
T  31234313 atttatttctctcatttaactgtcattttgtgtgtgaccctgtaggttatggtcacgttgacaataaaattaaatattatatttaatattataaacggtg 31234412  T
Q  287 agcggtatctagcaacacatcactgctacccaagt 321  Q
    || |||||||| |||||||||||||||||| ||||    
T  31234413 agtggtatctaacaacacatcactgctaccaaagt 31234447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 42816580 - 42816689
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 310  Q
    |||||||||||||||| |||||||  |  ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |    
T  42816580 ctttgtgtgtgaccctttaggttctaggcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcaacacatcatt 42816678  T
Q  311 gctacccaagt 321  Q
    |||||||||||    
T  42816679 gctacccaagt 42816689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 20390830 - 20390939
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || || |||||||| ||||||||||  ||||||||||  ||||||| |||||||||| ||||||||||||| ||    
T  20390830 ctttgtgtgtgaccctttaggttctagtcacattggcaatgatattaaatctaatatttaataccataaacaatgagcggtatgtagcaacacatcattg 20390929  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  20390930 ctacccaagt 20390939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 12006002 - 12006071
Alignment:
Q  252 aatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||| ||||| |||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  12006002 aataataaattacatatttaatagtatatacagtgagcggtatctagcaacacatcactactacccaagt 12006071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 315
Target Start/End: Original strand, 10852045 - 10852121
Alignment:
Q  239 taacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctac 315  Q
    |||| ||| ||||||| |||||| ||| |||||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  10852045 taaccttgacaataatgttaaatgacacatttaatattataaaccgtgagcggtatctagaaacacatcattgctac 10852121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 35132648 - 35132557
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacaca 305  Q
    ||||| ||||||| | |||||||| | ||||||| ||||||||||||||   ||||||||||| ||||| |||||||||||||||||||||||    
T  35132648 tttgtatgtgaccgtgtaggttcctgcaacgttg-caataatattaaatattatatttaatatcataaatagtgagcggtatctagcaacaca 35132557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 9076258 - 9076304
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgacc 225  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  9076258 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgacc 9076304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 14234606 - 14234684
Alignment:
Q  219 tgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatcta 297  Q
    ||||||||| ||||||| ||| || | | |||||||||||||||||| ||||||||||||||||| ||| |||| ||||    
T  14234606 tgtgaccctgtaggttctcgtgacatcgacaataatattaaatcacacatttaatattataaacattgaacggtgtcta 14234684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 22641052 - 22641135
Alignment:
Q  29 aatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaac-acttaaatacaccataccttacggtg 111  Q
    |||| |||| |||||| ||||||||||||||| || |||||| | || | || |||| ||||||||||||||||||||||||||    
T  22641052 aatgtttcagcacaagtgttctatttatagaaccaattgtgtcgtcatctagtcaaccacttaaatacaccataccttacggtg 22641135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 12013712 - 12013807
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcact 310  Q
    ||||||||||||||||||||||  ||    ||||| |||||||| |||| |  ||||||||||||||||||||||||  |||||||||| | ||||||    
T  12013712 tttgtgtgtgaccctataggttatcgccttgttggaaataatatgaaatta--tatttaatattataaacagtgagcattatctagcaatatatcact 12013807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 19819857 - 19819768
Alignment:
Q  193 tttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    |||||||||| ||| |||| | ||||||| ||||||||||||  ||| || |||| ||||||||||||| | ||| |||||||||||||||    
T  19819857 tttctctcatatatatgtcttatgtgtgtaaccctataggttaacgtcacattggtaataatattaaatgatata-ttaatattataaaca 19819768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 23509879 - 23509839
Alignment:
Q  31 tgcttcaacacaagggttctatttatagaatcacttgtgtg 71  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  23509879 tgcttcaacacaagggttctattaatagaaccacttgtgtg 23509839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 25662090 - 25662053
Alignment:
Q  34 ttcaacacaagggttctatttatagaatcacttgtgtg 71  Q
    |||||||||||||||||||||||| || ||||||||||    
T  25662090 ttcaacacaagggttctatttataaaaccacttgtgtg 25662053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 283
Target Start/End: Original strand, 24301359 - 24301391
Alignment:
Q  251 taatattaaatcacatatttaatattataaaca 283  Q
    |||||||||||| ||||||||||||||||||||    
T  24301359 taatattaaatctcatatttaatattataaaca 24301391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 131; Significance: 6e-68; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 19113 - 18971
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19113 gtcttacttatttatttctctcatctatctgtcctttctgtgtgaccctataggttcctgtaacgttggcaataatattaaatcacatatttaatattat 19014  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19013 aaacagtgagcggtatctagcaacacatcactgctacccaagt 18971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 19342 - 19219
Alignment:
Q  1 ttaggttaagcact-cacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacacca 99  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  19342 ttaggttaagcacttcacaaaaagttagtaatgtttcaacacaagggttctatttatagaatcacttgtgtgggcaacaagacaacacttaaatacaccg 19243  T
Q  100 taccttacggtgaaccgcgtttct 123  Q
    |||||| | ||| |||||||||||    
T  19242 taccttccagtggaccgcgtttct 19219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 6e-68; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 6094949 - 6094807
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6094949 gtcttacttatttatttctcttatctatctgtcctttgtgtgtgaccctataggttcctgtaacgttggcaataatattaaatcacatatttaatattat 6094850  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6094849 aaacagtgagcggtatctagcaacacatcactgctacccaagt 6094807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 21941491 - 21941349
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  21941491 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacattgacaataatattaaatcacatatttaatattat 21941392  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21941391 aaacagtgagcggtatctagcaacacatcactgctacccaagt 21941349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 15327024 - 15326882
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  15327024 gtcttacttatttgtttctttcatctatctgtcctttgtgtgtgaccctatatgttcccgtaacgttggcaataatattaaatcacgtatttaatattat 15326925  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  15326924 aaacagtgagcggtatctagcaacacatcactgctaccaaagt 15326882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 15507393 - 15507251
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  15507393 gtcttacttatttgtttctttcatctatctgtcctttgtgtgtgaccctatatgttcccgtaacgttggcaataatattaaatcacgtatttaatattat 15507294  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  15507293 aaacagtgagcggtatctagcaacacatcactgctaccaaagt 15507251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 6095175 - 6095045
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |    
T  6095175 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaccgt 6095076  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  6095075 accttacggtggaccgcgtttctctattttt 6095045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 22172514 - 22172384
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  22172514 ttaggttaagcactcacaaaagattagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccgt 22172415  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  22172414 accttacggtggaccgcgtttctctattttt 22172384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 21941696 - 21941564
Alignment:
Q  1 ttaggttaagcactcacaaaaag--ttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacacc 98  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21941696 ttaggttaagcactcacaaaaagggttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacatc 21941597  T
Q  99 ataccttacggtgaaccgcgtttctctattttt 131  Q
     ||||||||||||||||||||||||||||||||    
T  21941596 gtaccttacggtgaaccgcgtttctctattttt 21941564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 24643473 - 24643331
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||    
T  24643473 gtctcacttatttatttctctcatctatctgtcatttgtttgtgaccctataggctcccgtaacgttgacaataatattaaatcacatatttaatactat 24643374  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||| | |||||||||||||||||||||| ||||||||||    
T  24643373 aaacagtaaacggtatctagcaacacatcacttctacccaagt 24643331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 28548873 - 28548731
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||  | |||||||||||||    
T  28548873 gtcttacttatttatttctctcatctatctgtcctttgtgtgtgacccaataggttcccgtagcgttgacaataatattaaatttcgtatttaatattat 28548774  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  28548773 aaacagtgagcggtatctagcaacacatcactgttacccaagt 28548731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 15327252 - 15327122
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| |    
T  15327252 ttaggttaagcactcacaaaaggttagtaatgcttcaacacaaaggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaccgt 15327153  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||  |||||||||||||||||||    
T  15327152 accttacggtagaccgcgtttctctattttt 15327122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 15507621 - 15507491
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| |    
T  15507621 ttaggttaagcactcacaaaaggttagtaatgcttcaacacaaaggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaccgt 15507522  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||  |||||||||||||||||||    
T  15507521 accttacggtagaccgcgtttctctattttt 15507491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 28549076 - 28548946
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||||| | |    
T  28549076 ttaggttaagcactcacaaaatgttagtcatgcttcaacacaagggttctatttatagaatcacttatgtagtcagcaagacaacacttaaatacatcgt 28548977  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||||||| |||||||||||||||||||    
T  28548976 accttacggtggaccgcgtttctctattttt 28548946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 8370838 - 8370952
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  8370838 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 8370937  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  8370938 cattgctacccaagt 8370952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 25611912 - 25611798
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||    
T  25611912 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatcttacatttaatattataaacaatgagcggtatctagcaacacat 25611813  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  25611812 cattgctacccaagt 25611798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 26241202 - 26241088
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || || |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  26241202 ctgttctttgtgtgtgaccctataggttctagtcacattggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 26241103  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  26241102 cattgctacccaagt 26241088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 308
Target Start/End: Original strand, 24796391 - 24796515
Alignment:
Q  184 acttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    ||||||||| ||||||||||   ||||||||||||||| || ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||| |    
T  24796391 acttatttaattctctcatcatactgtcctttgtgtgtaactctataggttccggtaacgttgacaatattattaaatcacatatttaatattataaata 24796490  T
Q  284 gtgagcggtatctagcaacacatca 308  Q
    ||||||| |||||||| ||||||||    
T  24796491 gtgagcgatatctagccacacatca 24796515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 22130195 - 22130309
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  22130195 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 22130294  T
Q  307 cactgctacccaagt 321  Q
    ||  |||||||||||    
T  22130295 catggctacccaagt 22130309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 6431604 - 6431490
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||| ||||||||||||  || ||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  6431604 ctgttctttgtgtgtggccctataggttctagtcacgttggcaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacat 6431505  T
Q  307 cactgctacccaagt 321  Q
    || ||||||| ||||    
T  6431504 cattgctacctaagt 6431490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 21970050 - 21969936
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||     
T  21970050 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctgatatttaatattataaacattgagcggtatctagcaacacac 21969951  T
Q  307 cactgctacccaagt 321  Q
    || ||||| ||||||    
T  21969950 cattgctatccaagt 21969936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 22659084 - 22659193
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    ||||||||||||||||||||||||   | ||||||||||||||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| |     
T  22659084 ctttgtgtgtgaccctataggttctaatcacgttggcaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacatcattt 22659183  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  22659184 ctacccaagt 22659193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 27007108 - 27007217
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||| ||    
T  27007108 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatatcataaacaatgagcggtatctagcaacacatcattg 27007207  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  27007208 ctacccaagt 27007217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 27014251 - 27014360
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||| ||    
T  27014251 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaatatcataaacaatgagcggtatctagcaacacatcattg 27014350  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  27014351 ctacccaagt 27014360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 22172261 - 22172188
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaata 252  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22172261 gtcttacttatttatttctctcatctttctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaata 22172188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 27880078 - 27880187
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 310  Q
    |||||||||||||||| |||||||  || ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |    
T  27880078 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcaacacatcatt 27880176  T
Q  311 gctacccaagt 321  Q
    |||||||||||    
T  27880177 gctacccaagt 27880187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 28020259 - 28020368
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacat-atttaatattataaacagtgagcggtatctagcaacacatcact 310  Q
    |||||||||||||||| |||||||  || ||||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||| |    
T  28020259 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc-catcatttaatatcataaacaatgagcggtatctagcaacacatcatt 28020357  T
Q  311 gctacccaagt 321  Q
    |||||||||||    
T  28020358 gctacccaagt 28020368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 45533859 - 45533973
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||  |||| |||||  ||||||| ||||||||||||||||||||||    
T  45533859 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatctaataccataaacaatgagcggtatctagcaacacat 45533958  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  45533959 cattgctacccaagt 45533973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 321
Target Start/End: Complemental strand, 21917387 - 21917278
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||   |||||||||| ||||||| |||||||| ||||||||||||||| ||    
T  21917387 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatccattatttaatatcataaacaatgagcggtgtctagcaacacatcattg 21917288  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  21917287 ctacccaagt 21917278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 215 - 321
Target Start/End: Original strand, 8781467 - 8781573
Alignment:
Q  215 tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgcta 314  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||||||||    ||||||||||||||||||  |||||||||||||||||||||||||| |     
T  8781467 tgtgtgtgaccctataagttcctgtaacattgacaataatattaaattttttatttaatattataaacaacgagcggtatctagcaacacatcactgatt 8781566  T
Q  315 cccaagt 321  Q
    |||||||    
T  8781567 cccaagt 8781573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 18836057 - 18835949
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    ||||||||||||||||| |||||  |  |||||||||||||||||||||   ||||||||||||||||||| |||   |||||||||||||||||| |||    
T  18836057 tttgtgtgtgaccctattggttctagccacgttggcaataatattaaatttaatatttaatattataaacaatgactagtatctagcaacacatcattgc 18835958  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  18835957 tacccaagt 18835949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 2962515 - 2962630
Alignment:
Q  206 tctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacaca 305  Q
    ||||| |||| |||||||||||||||||||  || ||||||| ||||||||||||||  ||||||| || |||||| | ||||| ||||||| |||||||    
T  2962515 tctgttctttttgtgtgaccctataggttctagtcacgttggtaataatattaaatctaatatttattactataaataatgagcagtatctaacaacaca 2962614  T
Q  306 tcactgctacccaagt 321  Q
    ||| ||||||||||||    
T  2962615 tcattgctacccaagt 2962630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 24643624 - 24643521
Alignment:
Q  29 aatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaatacaccataccttacggtgaaccgcgtttctctat 127  Q
    ||||||||| || ||||||||||||||||||| ||||||||||  ||||||| ||| |||||||||||||| ||| |||||||| ||| | || ||||||    
T  24643624 aatgcttcagcataagggttctatttatagaaccacttgtgtgatcaacaagccaatcacttaaatacaccgtactttacggtggacctcattactctat 24643525  T
Q  128 tttt 131  Q
    ||||    
T  24643524 tttt 24643521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 316
Target Start/End: Original strand, 14978900 - 14979001
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    ||||||||||| | | |||||||  ||||| ||| ||||||||||||||| | |  ||||||||||||||||||||||||||||||  |||| |||||||    
T  14978900 tttgtgtgtgatcttgtaggttcttgtaacattgacaataatattaaatctcgt--ttaatattataaacagtgagcggtatctagatacacgtcactgc 14978997  T
Q  313 tacc 316  Q
    ||||    
T  14978998 tacc 14979001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 29230424 - 29230335
Alignment:
Q  19 aaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaatacaccataccttacggtg 111  Q
    |||||| |||||||||||| |||    ||||||||||||||||||||||||||| || |||  ||| ||||||| |||||  ||||||||||||    
T  29230424 aaaagtcagtaatgcttcatcac----gttctatttatagaatcacttgtgtggtcagcaaaccaagcacttaagtacactttaccttacggtg 29230335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 38231130 - 38231195
Alignment:
Q  239 taacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||||||| ||||||||||||| ||  |||||| ||||||||||| ||||| ||||||||| ||||||    
T  38231130 taacgttgacaataatattaaacca--tatttagtattataaacaatgagcagtatctagctacacat 38231195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 22646489 - 22646434
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatc 262  Q
    |||| |||||||||||||||| |||||||  || ||||||||||| ||||||||||    
T  22646489 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatc 22646434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 315
Target Start/End: Original strand, 32872300 - 32872367
Alignment:
Q  248 caataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctac 315  Q
    |||||||||||||||   |||||||||||||||| ||  |  |||||||| |||||||||||||||||    
T  32872300 caataatattaaatcttgtatttaatattataaagagcaataggtatctaacaacacatcactgctac 32872367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 318
Target Start/End: Complemental strand, 2375767 - 2375722
Alignment:
Q  273 tattataaacagtgagcggtatctagcaacacatcactgctaccca 318  Q
    ||||||||||| |||| ||||||||  |||||||||||||||||||    
T  2375767 tattataaacaatgagtggtatctaagaacacatcactgctaccca 2375722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 27098592 - 27098656
Alignment:
Q  218 gtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    ||||||| |||||||||  | | ||||||| ||||||||||||||| ||| |||||||||||||||    
T  27098592 gtgtgactctataggttttcttcacgttggtaataatattaaatcatata-ttaatattataaaca 27098656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 32872123 - 32872156
Alignment:
Q  31 tgcttcaacacaagggttctatttatagaatcac 64  Q
    |||||||||||||||||||| |||||||||||||    
T  32872123 tgcttcaacacaagggttctctttatagaatcac 32872156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 37031890 - 37031958
Alignment:
Q  227 tataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatc 295  Q
    |||||||||  |||| ||||||||||| |||||||   |||||||||||||| || ||||| |||||||    
T  37031890 tataggttcttgtaatgttggcaataaaattaaattttatatttaatattatgaatagtgaacggtatc 37031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 6348 - 6206
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6348 gtcttacttatttatttctctcatctatctgtcttttgtgtgtgaccctataggttcccgtaacgttgacaataatattaaatcacatatttaatattat 6249  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  6248 aaatagtgagcggtatctagcaacacatcactgctacccaagt 6206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 6534 - 6421
Alignment:
Q  18 aaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccataccttacggtgaaccgc 117  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||     
T  6534 aaaaagttcgtcatgcttcaacacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaccatactttacggtggaccga 6435  T
Q  118 gtttctctattttt 131  Q
    ||||||| ||||||    
T  6434 gtttctccattttt 6421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 6e-65; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 196 - 321
Target Start/End: Original strand, 21329646 - 21329771
Alignment:
Q  196 ctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatc 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21329646 ctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatc 21329745  T
Q  296 tagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||||||||||||||    
T  21329746 tagcaacacatcactgctacccaagt 21329771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 22791245 - 22791379
Alignment:
Q  185 cttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacag 284  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22791245 cttatttatttctcttatctatctgtcctttgtgtgtgaccctataggttcccgtaactttggcaataatattaaatcacatatttaatattataaacag 22791344  T
Q  285 tgagcggtatctagcaacacatcactgctacccaa 319  Q
    ||||| ||||||||||||||||||||| |||||||    
T  22791345 tgagcagtatctagcaacacatcactgttacccaa 22791379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 21329420 - 21329552
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctattt--atagaatcacttgtgtggacaacaagacaacacttaaatacacc 98  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  21329420 ttaggttaagcactcacaaaaagttagtaatgtttcaacacaagggttctatttttatagaatcacttgtgtggacaacaagacaacacttaaatacacc 21329519  T
Q  99 ataccttacggtgaaccgcgtttctctattttt 131  Q
     |||||||||||| |||||||||||||||||||    
T  21329520 gtaccttacggtggaccgcgtttctctattttt 21329552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 41662096 - 41661956
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||| |||||||||| ||||||||||  | |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41662096 gtcttacttatttatttctcccatctatctgccctttgtgtg--atcctataggttcccgtaacgttgacaataatattaaatcacatatttaatattat 41661999  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  41661998 aaacagtgagcggtatctagcaacacatcactgctacacaagt 41661956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22791011 - 22791141
Alignment:
Q  1 ttaggttaagcactcacaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccat 100  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |    
T  22791011 ttaggttaagcactcacaaaaagttagtaatgctacaaaacaagggttctatttatagaatcacttgtgtggtcagcaagacaacacttaaatacaccgt 22791110  T
Q  101 accttacggtgaaccgcgtttctctattttt 131  Q
    ||||||| ||| || ||||||||||||||||    
T  22791111 accttacagtggactgcgtttctctattttt 22791141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 18620626 - 18620484
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||||||||    
T  18620626 gtcttacttatttatttctctcatctatatggcctttgtgtgtgaccctataggttcctataacgttaaaaataatattaaatcacatatttaatattat 18620527  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||| |||||||||||||||| ||  |||||||| || ||||||    
T  18620526 aaatagtgagcggtatctagaaattcatcactgttatccaagt 18620484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 24249618 - 24249732
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  24249618 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 24249717  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  24249718 cattgctacccaagt 24249732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 30175093 - 30174979
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  30175093 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 30174994  T
Q  307 cactgctacccaagt 321  Q
    ||  |||||||||||    
T  30174993 catggctacccaagt 30174979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 29801182 - 29801075
Alignment:
Q  214 ttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 313  Q
    |||||||||| | |||||||||  || ||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29801182 ttgtgtgtgatcatataggttcttgtcacgttggcaataatattaaatcttatatttaatattataaacagtgagtggtatctagcaacacatcactgct 29801083  T
Q  314 acccaagt 321  Q
    ||| ||||    
T  29801082 acctaagt 29801075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 24228799 - 24228913
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  |||||||||  |||||| ||| ||||||||||||||||||||    
T  24228799 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctaatatttaatgctataaatagtaagcggtatctagcaacacat 24228898  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  24228899 cattgctacccaagt 24228913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 36270951 - 36270853
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    ||||||||||||| | ||||||| ||||| |||| |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  36270951 tttgtgtgtgaccatgtaggttctcgtaatgttgacaataatattaaattacatatttaatattataaatagtgagcgatatctagcaacacatcactg 36270853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 244 - 321
Target Start/End: Original strand, 15341623 - 15341700
Alignment:
Q  244 ttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||    
T  15341623 ttggcaataatattaaatcatatatttaatattataaatagtgagcggtatctagcaacacaccaccgctacccaagt 15341700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 24763262 - 24763357
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatca 308  Q
    ||||||||||||||  |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  24763262 tttgtgtgtgaccccttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagccgtatctagcaacacatca 24763357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 12298542 - 12298442
Alignment:
Q  216 gtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctac 315  Q
    ||||||| || | ||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| | || |||||||| |||||||||||| ||||    
T  12298542 gtgtgtgcccttgtaggttctcgtaacgttgacaatgatattaaatcacatatttaatattataaacaataagtggtatctaacaacacatcacttctac 12298443  T
Q  316 c 316  Q
    |    
T  12298442 c 12298442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 18797245 - 18797190
Alignment:
Q  266 tatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18797245 tatttaatattataaacagtgagcggtatctagcaacacatcattgctacccaagt 18797190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 19617145 - 19617038
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    |||||||||||||  ||||||||  || | |||||||||||||||||| |  | ||||||||||||||||| | |||||||||||||||||||| | |||    
T  19617145 tttgtgtgtgaccacataggttctagtcatgttggcaataatattaaaactaa-atttaatattataaacaataagcggtatctagcaacacattattgc 19617047  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  19617046 tacccaagt 19617038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 319
Target Start/End: Original strand, 20687044 - 20687111
Alignment:
Q  252 aatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaa 319  Q
    |||||||||||  |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||    
T  20687044 aatattaaatcttatatttaatactataaacagtgagcgatatctagcaacacctcactgctacccaa 20687111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 31848165 - 31848072
Alignment:
Q  215 tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatca 308  Q
    ||||||||||| | ||||||| |||||  |||| ||||| |||| || | |||||||| |||||||||||||||||||||||||||| ||||||    
T  31848165 tgtgtgtgaccatgtaggttctcgtaatattggtaataacattatataatatatttaacattataaacagtgagcggtatctagcaatacatca 31848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 22182960 - 22183017
Alignment:
Q  266 tatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaagtaa 323  Q
    |||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||    
T  22182960 tatttaatattataaacaatgagaggtatctagtaacacattactgctacccaagtaa 22183017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 18822832 - 18822734
Alignment:
Q  185 cttatttatttctctcatctatctgtcctt---tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataa 280  Q
    |||||||||||||||| | ||  |||||||   ||||||||| ||||||||||  |||| | ||| ||||||||||||| || ||||||||||||||||    
T  18822832 cttatttatttctctcgtttaattgtccttatgtgtgtgtgatcctataggttttcgtatcattgacaataatattaaaccatatatttaatattataa 18822734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 27353364 - 27353286
Alignment:
Q  34 ttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaatacaccataccttacggtg 111  Q
    |||| |||||| ||||||||||||||| | ||||||||| || |||| ||| ||||||| |||||| ||||||||||||    
T  27353364 ttcagcacaagtgttctatttatagaaccccttgtgtggtcatcaagtcaatcacttaattacaccgtaccttacggtg 27353286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 18620849 - 18620805
Alignment:
Q  16 acaaaaagttagtaatgcttcaacacaagggttctatttatagaa 60  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||    
T  18620849 acaaaaagtcagtaatgctttagcacaagggttctatttatagaa 18620805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 313
Target Start/End: Complemental strand, 23662211 - 23662128
Alignment:
Q  230 aggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgct 313  Q
    |||||| | ||||||||  |||||||||||| ||||| |||||| ||||||| |||||  |||||||| |||||| ||| ||||    
T  23662211 aggttctcataacgttgagaataatattaaaccacatgtttaatgttataaatagtgataggtatctaacaacacgtcattgct 23662128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 41332880 - 41332825
Alignment:
Q  253 atattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatca 308  Q
    ||||||||||   ||||| |||||||||| |||||| |||||||||||||||||||    
T  41332880 atattaaatcttttatttgatattataaatagtgagtggtatctagcaacacatca 41332825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 18822967 - 18822934
Alignment:
Q  38 acacaagggttctatttatagaatcacttgtgtg 71  Q
    ||||||||||||||||||||||||| ||||||||    
T  18822967 acacaagggttctatttatagaatcccttgtgtg 18822934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 40300567 - 40300634
Alignment:
Q  215 tgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    ||||||||||| | ||| ||| |||||| |||  ||||||||||||||| ||| |||||||||||||||    
T  40300567 tgtgtgtgaccttgtagtttctcgtaacattgataataatattaaatcatata-ttaatattataaaca 40300634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 229772 - 229914
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattat 278  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||    
T  229772 gtcttacttatttatttctctcatgtatctgtcctttgtgtgtgaccctataggttgccgtaacgttgacaataatattaaatcacatatttcaaattat 229871  T
Q  279 aaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  229872 aaacagtgagcggtatccagcaacacatcattgctacccaagt 229914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 229586 - 229699
Alignment:
Q  18 aaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatacaccataccttacggtgaaccgc 117  Q
    |||||||| || ||||||||||| ||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||| ||| |    
T  229586 aaaaagttcgtcatgcttcaacagaagggttctatttatagaatcacttgtgtggtcagcaagaaaacacttaaatacaccgtaccttacggtggaccac 229685  T
Q  118 gtttctctattttt 131  Q
     |||||||||||||    
T  229686 atttctctattttt 229699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1199 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold1199
Description:

Target: scaffold1199; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 154 - 19
Alignment:
Q  1 ttaggttaagcactcac-----aaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtggacaacaagacaacacttaaatac 95  Q
    |||||||||||||||||     ||||||||  |||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||    
T  154 ttaggttaagcactcacttttcaaaaagttcataatgcttcaacacaagggttctatttatagaataacttgtgtggtcagcaagacaacacttaaatac 55  T
Q  96 accataccttacggtgaaccgcgtttctctattttt 131  Q
    ||| |||||||||||| |||||||||||||||||||    
T  54 accgtaccttacggtggaccgcgtttctctattttt 19  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 900 - 786
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  900 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 801  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  800 cattgctacccaagt 786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 1343 - 1438
Alignment:
Q  179 gtctcacttatttatttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaata 274  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  1343 gtcttacttatttatttctctcatctatctgtcatttgtgtgtgaccctataggttctcgtaacgttggcaataatattaaatcacgtatttaata 1438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 1180 - 1272
Alignment:
Q  39 cacaagggttctatttatagaatcacttgtgtggacaacaagacaa-cacttaaatacaccataccttacggtgaaccgcgtttctctatttt 130  Q
    |||||| ||||||||||||||| |||||| |||| || |||| ||| || ||||| ||||| ||||||||| || ||||| ||||||||||||    
T  1180 cacaagtgttctatttatagaaccacttgcgtggtcatcaagtcaatcaattaaacacaccgtaccttacgctggaccgcatttctctatttt 1272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 879 - 765
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  879 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatctagcaacacat 780  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  779 cattgctacccaagt 765  T

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Target: scaffold0028 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 120446 - 120332
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||||||| |||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  120446 ctgttctttgtgtgtgaccctttaggttctagtcacgttggcaataatattaaatctaatatttaatattataaacaatgagcggtatctagcaacacat 120347  T
Q  307 cactgctacccaagt 321  Q
    ||  |||||||||||    
T  120346 catggctacccaagt 120332  T

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Target: scaffold0006 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 66993 - 67107
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacat 306  Q
    |||| |||||||||||| |||||||||||  || |||||| |||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||    
T  66993 ctgttctttgtgtgtgatcctataggttctagtcacgttgacaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacat 67092  T
Q  307 cactgctacccaagt 321  Q
    || ||||||||||||    
T  67093 cattgctacccaagt 67107  T

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Target: scaffold0264 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 3266 - 3375
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    |||||||||||||||| |||||||  || ||||||||||| ||||||||||  ||||||||||  ||||||| |||||||||||||||||||||||| ||    
T  3266 ctttgtgtgtgaccctttaggttctagtcacgttggcaatgatattaaatctaatatttaataccataaacaatgagcggtatctagcaacacatcattg 3365  T
Q  312 ctacccaagt 321  Q
    ||||||||||    
T  3366 ctacccaagt 3375  T

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Target: scaffold0686 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 8099 - 8188
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatct 296  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  8099 ctgttctttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatctgatatttaatattataaacaatgagcggtatct 8188  T

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Target: scaffold0111 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 27253 - 27145
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    |||||||||||||| |||||||   || |||||||||||||||||||||   ||||||||||||||||||| |||| ||||||||||||||||||| |||    
T  27253 tttgtgtgtgaccccataggttttagtcacgttggcaataatattaaatataatatttaatattataaacaatgagaggtatctagcaacacatcattgc 27154  T
Q  313 tacccaagt 321  Q
    || ||||||    
T  27153 taaccaagt 27145  T

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Target: scaffold0086 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 316
Target Start/End: Complemental strand, 54475 - 54371
Alignment:
Q  212 ctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactg 311  Q
    ||||||||||||||||||| ||||  || ||||||||||||||| ||||||  ||||| |||| |||||||| |||||||||||||||||||||||| ||    
T  54475 ctttgtgtgtgaccctataagttctagtcacgttggcaataatactaaatctaatattcaatactataaacaatgagcggtatctagcaacacatcattg 54376  T
Q  312 ctacc 316  Q
    |||||    
T  54375 ctacc 54371  T

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Target: scaffold0031 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 39578 - 39686
Alignment:
Q  213 tttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgc 312  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||   |||||||||||||||||||  |||| ||||||| ||||||| || |||    
T  39578 tttgtgtgtgaccctataggttctagtcacgttggcaataatattaaatgtaatatttaatattataaacaacgagcagtatctaacaacacaacattgc 39677  T
Q  313 tacccaagt 321  Q
    |||||||||    
T  39678 tacccaagt 39686  T

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Target: scaffold0466 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 240 - 321
Target Start/End: Original strand, 12567 - 12648
Alignment:
Q  240 aacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacccaagt 321  Q
    |||||||||||||||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||    
T  12567 aacgttggcaataatattaaatctaatatttaatactataaacaatgagcggtatctagcaacacatcattgctaaccaagt 12648  T

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Target: scaffold0017 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 207 - 292
Target Start/End: Complemental strand, 128213 - 128128
Alignment:
Q  207 ctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggt 292  Q
    |||| ||||||||||||||||||||||||  || |||||| |||||||||||||||  |||||||||| |||||||| ||||||||    
T  128213 ctgttctttgtgtgtgaccctataggttctagtcacgttgacaataatattaaatctaatatttaatactataaacaatgagcggt 128128  T

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Target: scaffold0023 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 323
Target Start/End: Original strand, 108718 - 108824
Alignment:
Q  217 tgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaacagtgagcggtatctagcaacacatcactgctacc 316  Q
    ||||| |||||||||||||   | |||||| |||||||||||||||   | |||||||||||||  | ||||| |||||||| |||||||||||||||||    
T  108718 tgtgtaaccctataggttcttttcacgttgacaataatattaaatctattctttaatattataatgaatgagcagtatctagaaacacatcactgctacc 108817  T
Q  317 caagtaa 323  Q
    |||||||    
T  108818 caagtaa 108824  T

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Target: scaffold0032 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 107441 - 107497
Alignment:
Q  16 acaaaaagttagtaatgcttcaacacaagggttctatttatagaatcacttgtgtgg 72  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  107441 acaaaaacttagtaatgcttcagcacaagggttctatttacagaaccacttgtgtgg 107497  T

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Target: scaffold0160 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 321
Target Start/End: Complemental strand, 24590 - 24456
Alignment:
Q  185 cttatttatttctctcatctatctgtccttt-gtgtgtgaccctataggttcccgtaacgttggcaataatattaaatcacatatttaatattataaaca 283  Q
    |||| ||||||||||| | ||| |||||||| |||||||||| | || ||||   |||||||| ||||||||| ||||    |||| |||||||||||||    
T  24590 cttacttatttctctcgtttatttgtccttttgtgtgtgaccttttaagttcttctaacgttgacaataatat-aaatgt--tattcaatattataaaca 24494  T
Q  284 gtgagcggtatctagcaacacatcactgctacccaagt 321  Q
     |||| ||||||||||||||| |||||| |||||||||    
T  24493 ctgaggggtatctagcaacacgtcactgttacccaagt 24456  T

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Target: scaffold0375 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 15912 - 15842
Alignment:
Q  193 tttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataatattaaatca 263  Q
    |||||||||| ||| |||||| ||||||||||| |||||||| |||| || |||  |||||||||||||||    
T  15912 tttctctcatttatttgtcctatgtgtgtgaccatataggtttccgtcacattgttaataatattaaatca 15842  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 81362 - 81424
Alignment:
Q  193 tttctctcatctatctgtcctttgtgtgtgaccctataggttcccgtaacgttggcaataata 255  Q
    |||||||||| ||| | || ||||||||||||||||||||||| ||| || |||| |||||||    
T  81362 tttctctcatttatatatcatttgtgtgtgaccctataggttctcgtcacattggtaataata 81424  T

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Target: scaffold0186 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Original strand, 25481 - 25513
Alignment:
Q  289 cggtatctagcaacacatcactgctacccaagt 321  Q
    ||||||||||||| |||||||||||||||||||    
T  25481 cggtatctagcaagacatcactgctacccaagt 25513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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