View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11811_low_29 (Length: 242)

Name: NF11811_low_29
Description: NF11811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11811_low_29
NF11811_low_29
[»] chr5 (46 HSPs)
chr5 (1-232)||(20694582-20694813)
chr5 (6-213)||(26070435-26070642)
chr5 (10-226)||(20083414-20083631)
chr5 (6-213)||(30790742-30790944)
chr5 (9-151)||(19763842-19763982)
chr5 (63-207)||(23157792-23157936)
chr5 (32-213)||(25594664-25594846)
chr5 (9-165)||(7742819-7742975)
chr5 (6-161)||(24410876-24411031)
chr5 (32-188)||(19331497-19331651)
chr5 (11-154)||(15697288-15697431)
chr5 (6-213)||(12339960-12340167)
chr5 (6-158)||(25680612-25680756)
chr5 (7-154)||(16634066-16634214)
chr5 (6-231)||(17381990-17382207)
chr5 (33-163)||(18222504-18222635)
chr5 (6-162)||(24841765-24841922)
chr5 (6-211)||(24517317-24517514)
chr5 (9-231)||(15205588-15205809)
chr5 (31-114)||(25367654-25367737)
chr5 (34-150)||(18178126-18178241)
chr5 (85-227)||(24130602-24130744)
chr5 (16-231)||(17027470-17027686)
chr5 (6-150)||(22229828-22229973)
chr5 (62-230)||(22967845-22968013)
chr5 (6-154)||(11274276-11274426)
chr5 (6-74)||(25075258-25075327)
chr5 (6-74)||(25133227-25133296)
chr5 (140-228)||(22643945-22644033)
chr5 (90-154)||(24268575-24268639)
chr5 (90-154)||(24345204-24345268)
chr5 (95-227)||(24846208-24846340)
chr5 (37-154)||(16603590-16603709)
chr5 (17-133)||(11997851-11997968)
chr5 (62-231)||(16622670-16622838)
chr5 (16-69)||(24279582-24279635)
chr5 (16-69)||(24382579-24382632)
chr5 (18-105)||(22754963-22755051)
chr5 (101-166)||(25942149-25942214)
chr5 (35-131)||(29150882-29150977)
chr5 (33-64)||(25943702-25943733)
chr5 (6-154)||(26330015-26330163)
chr5 (53-133)||(4325351-4325431)
chr5 (101-133)||(10702677-10702709)
chr5 (16-68)||(17695412-17695464)
chr5 (6-74)||(22643851-22643919)
[»] chr2 (40 HSPs)
chr2 (6-232)||(19540979-19541205)
chr2 (17-228)||(24047328-24047539)
chr2 (6-231)||(18236249-18236474)
chr2 (6-228)||(22388704-22388921)
chr2 (6-165)||(17152162-17152322)
chr2 (6-155)||(21849020-21849168)
chr2 (16-225)||(17240813-17241019)
chr2 (6-192)||(18818679-18818865)
chr2 (10-226)||(31449905-31450121)
chr2 (6-152)||(34063787-34063938)
chr2 (50-232)||(32276504-32276686)
chr2 (91-208)||(17415227-17415344)
chr2 (6-153)||(24187987-24188138)
chr2 (21-165)||(18116992-18117135)
chr2 (6-159)||(27917929-27918083)
chr2 (32-231)||(21505111-21505311)
chr2 (6-163)||(30998782-30998940)
chr2 (6-147)||(39730474-39730615)
chr2 (6-74)||(17415109-17415177)
chr2 (63-165)||(21843006-21843108)
chr2 (19-165)||(31262008-31262153)
chr2 (91-228)||(29647577-29647714)
chr2 (33-231)||(28278396-28278594)
chr2 (9-163)||(35707814-35707969)
chr2 (9-213)||(25473997-25474203)
chr2 (76-165)||(21844646-21844735)
chr2 (6-70)||(1732655-1732719)
chr2 (6-159)||(16593696-16593852)
chr2 (16-133)||(34076979-34077096)
chr2 (34-162)||(35031714-35031843)
chr2 (9-65)||(14921988-14922044)
chr2 (6-163)||(15829145-15829290)
chr2 (10-192)||(22510929-22511110)
chr2 (90-163)||(1733111-1733184)
chr2 (6-165)||(15454485-15454636)
chr2 (6-97)||(27417209-27417301)
chr2 (17-133)||(32703892-32704008)
chr2 (143-211)||(22525736-22525805)
chr2 (16-66)||(17862518-17862568)
chr2 (17-49)||(32141584-32141616)
[»] chr4 (39 HSPs)
chr4 (6-230)||(10576397-10576621)
chr4 (41-232)||(22119588-22119779)
chr4 (6-228)||(9288156-9288378)
chr4 (6-154)||(26159776-26159924)
chr4 (9-232)||(21167671-21167895)
chr4 (6-208)||(21077199-21077401)
chr4 (6-209)||(29437434-29437639)
chr4 (6-231)||(17339761-17339985)
chr4 (7-165)||(23353632-23353789)
chr4 (10-192)||(19601780-19601963)
chr4 (6-231)||(46647139-46647363)
chr4 (6-163)||(34864241-34864395)
chr4 (19-213)||(20044139-20044333)
chr4 (6-213)||(31859847-31860034)
chr4 (6-147)||(18444277-18444418)
chr4 (17-162)||(25315188-25315334)
chr4 (27-164)||(13275712-13275849)
chr4 (17-213)||(33519001-33519187)
chr4 (6-163)||(9782929-9783087)
chr4 (85-213)||(5906746-5906874)
chr4 (91-231)||(24925748-24925888)
chr4 (6-69)||(13064531-13064594)
chr4 (6-144)||(15192233-15192372)
chr4 (99-154)||(27302798-27302853)
chr4 (10-143)||(17187207-17187337)
chr4 (90-162)||(1676326-1676398)
chr4 (90-162)||(1682854-1682926)
chr4 (19-144)||(16442218-16442343)
chr4 (6-162)||(18898003-18898151)
chr4 (33-165)||(4732759-4732891)
chr4 (27-74)||(13206643-13206690)
chr4 (6-108)||(17026642-17026745)
chr4 (90-162)||(12111362-12111435)
chr4 (31-69)||(12243698-12243736)
chr4 (6-51)||(7024165-7024210)
chr4 (52-165)||(53001170-53001283)
chr4 (6-105)||(5676268-5676368)
chr4 (17-49)||(17434303-17434335)
chr4 (36-120)||(30624921-30625004)
[»] scaffold0190 (1 HSPs)
scaffold0190 (6-232)||(11644-11870)
[»] chr3 (39 HSPs)
chr3 (6-232)||(11474788-11475015)
chr3 (16-230)||(21829089-21829303)
chr3 (6-163)||(26297760-26297915)
chr3 (6-214)||(26387791-26387999)
chr3 (6-231)||(8402498-8402722)
chr3 (18-163)||(18474182-18474326)
chr3 (6-154)||(27374399-27374546)
chr3 (6-192)||(28422435-28422621)
chr3 (17-164)||(23908228-23908375)
chr3 (6-123)||(26797195-26797311)
chr3 (24-144)||(30493228-30493349)
chr3 (19-210)||(21813450-21813642)
chr3 (33-154)||(13911285-13911407)
chr3 (6-154)||(25883123-25883272)
chr3 (6-154)||(33577754-33577902)
chr3 (5-159)||(2729563-2729718)
chr3 (6-231)||(19219157-19219383)
chr3 (6-211)||(21017840-21018046)
chr3 (6-212)||(33914513-33914715)
chr3 (16-151)||(27415194-27415327)
chr3 (6-163)||(12573301-12573459)
chr3 (6-163)||(13549765-13549923)
chr3 (90-151)||(19546014-19546075)
chr3 (103-218)||(27375090-27375205)
chr3 (16-227)||(19285048-19285257)
chr3 (59-163)||(23007065-23007169)
chr3 (6-163)||(1475225-1475384)
chr3 (18-133)||(31279082-31279197)
chr3 (85-163)||(19263924-19264002)
chr3 (62-163)||(10341807-10341907)
chr3 (65-212)||(26775015-26775163)
chr3 (27-80)||(31286378-31286431)
chr3 (6-69)||(16970566-16970630)
chr3 (60-231)||(25188701-25188871)
chr3 (62-163)||(25919465-25919568)
chr3 (17-65)||(26418829-26418877)
chr3 (91-154)||(12409478-12409541)
chr3 (85-154)||(18065836-18065902)
chr3 (16-67)||(26484776-26484827)
[»] chr8 (36 HSPs)
chr8 (9-232)||(29291713-29291935)
chr8 (5-232)||(14424758-14424985)
chr8 (6-177)||(5153755-5153926)
chr8 (6-232)||(10866930-10867156)
chr8 (10-212)||(11437381-11437583)
chr8 (6-226)||(30543711-30543929)
chr8 (18-230)||(31436423-31436635)
chr8 (6-166)||(27097746-27097908)
chr8 (6-230)||(35135367-35135594)
chr8 (6-229)||(30851046-30851269)
chr8 (6-151)||(28260236-28260381)
chr8 (6-134)||(28074554-28074681)
chr8 (6-163)||(13583466-13583613)
chr8 (6-231)||(13530052-13530277)
chr8 (6-231)||(13619591-13619816)
chr8 (16-231)||(12774799-12775015)
chr8 (23-165)||(6888156-6888295)
chr8 (34-192)||(24584698-24584857)
chr8 (70-231)||(14977117-14977279)
chr8 (4-231)||(16052221-16052449)
chr8 (6-190)||(28292047-28292232)
chr8 (85-212)||(12956451-12956578)
chr8 (6-163)||(16054305-16054463)
chr8 (6-207)||(28902056-28902258)
chr8 (4-163)||(32239298-32239458)
chr8 (90-162)||(28901371-28901443)
chr8 (9-69)||(12357578-12357638)
chr8 (9-69)||(12358706-12358766)
chr8 (6-163)||(29047265-29047420)
chr8 (54-197)||(5570136-5570279)
chr8 (12-165)||(26882417-26882571)
chr8 (60-163)||(13081938-13082041)
chr8 (32-154)||(22894502-22894625)
chr8 (136-231)||(24120174-24120269)
chr8 (16-116)||(24696639-24696740)
chr8 (52-145)||(41505530-41505623)
[»] chr1 (35 HSPs)
chr1 (6-232)||(15298816-15299042)
chr1 (10-231)||(26102000-26102221)
chr1 (16-232)||(18795123-18795339)
chr1 (6-237)||(31313488-31313720)
chr1 (6-227)||(26854266-26854485)
chr1 (6-232)||(25126420-25126648)
chr1 (16-229)||(27461137-27461351)
chr1 (16-213)||(19257760-19257958)
chr1 (6-163)||(30675495-30675653)
chr1 (16-148)||(21548674-21548806)
chr1 (6-230)||(15416920-15417144)
chr1 (6-131)||(30781803-30781929)
chr1 (6-162)||(52271191-52271347)
chr1 (6-162)||(26657488-26657645)
chr1 (35-162)||(50047193-50047321)
chr1 (16-218)||(18391038-18391240)
chr1 (10-211)||(34381671-34381875)
chr1 (16-163)||(11769950-11770098)
chr1 (6-153)||(25730517-25730665)
chr1 (90-162)||(12810334-12810406)
chr1 (10-151)||(8247607-8247749)
chr1 (60-154)||(12423915-12424009)
chr1 (16-163)||(25494444-25494583)
chr1 (6-150)||(25727855-25728000)
chr1 (6-150)||(25736263-25736408)
chr1 (54-147)||(13807747-13807840)
chr1 (6-154)||(18300949-18301098)
chr1 (113-231)||(21550933-21551049)
chr1 (71-151)||(19884195-19884275)
chr1 (33-163)||(23223422-23223554)
chr1 (54-154)||(25266340-25266440)
chr1 (95-230)||(25965410-25965545)
chr1 (6-70)||(15850975-15851039)
chr1 (180-226)||(34935303-34935349)
chr1 (4-53)||(23521673-23521722)
[»] scaffold1026 (1 HSPs)
scaffold1026 (5-212)||(1779-1984)
[»] chr7 (44 HSPs)
chr7 (21-232)||(17881460-17881670)
chr7 (6-192)||(30405578-30405762)
chr7 (6-166)||(3268912-3269072)
chr7 (6-231)||(29544462-29544688)
chr7 (9-131)||(8308981-8309103)
chr7 (6-228)||(18496511-18496733)
chr7 (6-154)||(20461594-20461742)
chr7 (16-191)||(24596960-24597135)
chr7 (6-165)||(1074461-1074621)
chr7 (96-214)||(8606029-8606147)
chr7 (6-165)||(23124909-23125069)
chr7 (6-165)||(5312732-5312891)
chr7 (14-163)||(7372519-7372670)
chr7 (16-231)||(22532601-22532815)
chr7 (21-228)||(4828737-4828942)
chr7 (6-154)||(7142118-7142267)
chr7 (6-213)||(22067748-22067961)
chr7 (54-163)||(1255208-1255317)
chr7 (31-162)||(12358733-12358864)
chr7 (6-191)||(4977766-4977952)
chr7 (6-159)||(7815338-7815492)
chr7 (17-231)||(2353199-2353412)
chr7 (4-131)||(10292797-10292925)
chr7 (17-168)||(20470767-20470919)
chr7 (20-218)||(46054654-46054850)
chr7 (91-192)||(7361665-7361766)
chr7 (91-228)||(9755746-9755883)
chr7 (6-131)||(9761361-9761487)
chr7 (6-131)||(9801820-9801946)
chr7 (91-191)||(9800579-9800679)
chr7 (135-231)||(28952015-28952111)
chr7 (6-69)||(3487312-3487375)
chr7 (71-154)||(21545811-21545894)
chr7 (6-163)||(315196-315342)
chr7 (99-177)||(2350994-2351072)
chr7 (16-104)||(7326827-7326915)
chr7 (33-168)||(21471803-21471938)
chr7 (59-163)||(2632436-2632540)
chr7 (91-165)||(7956190-7956264)
chr7 (62-163)||(37144931-37145032)
chr7 (16-68)||(14649609-14649661)
chr7 (19-133)||(10253700-10253814)
chr7 (131-232)||(16577344-16577444)
chr7 (131-232)||(16588218-16588318)
[»] scaffold0043 (1 HSPs)
scaffold0043 (6-228)||(58691-58914)
[»] chr6 (33 HSPs)
chr6 (18-232)||(12972343-12972557)
chr6 (16-163)||(14768225-14768372)
chr6 (16-228)||(14924374-14924586)
chr6 (6-212)||(9396553-9396752)
chr6 (35-212)||(26512753-26512930)
chr6 (35-212)||(26517869-26518046)
chr6 (4-163)||(17860392-17860552)
chr6 (8-118)||(24617567-24617677)
chr6 (16-165)||(32930429-32930578)
chr6 (16-152)||(16439481-16439616)
chr6 (18-165)||(9943108-9943255)
chr6 (55-232)||(20495790-20495966)
chr6 (99-214)||(24507624-24507739)
chr6 (92-212)||(17198788-17198905)
chr6 (6-148)||(1755508-1755650)
chr6 (21-123)||(26499808-26499910)
chr6 (92-232)||(33638517-33638656)
chr6 (27-231)||(13835544-13835748)
chr6 (6-165)||(15574934-15575093)
chr6 (92-163)||(13759484-13759555)
chr6 (99-165)||(16387288-16387354)
chr6 (147-231)||(16438583-16438664)
chr6 (34-207)||(26518507-26518681)
chr6 (62-231)||(30355269-30355437)
chr6 (6-56)||(33638451-33638501)
chr6 (62-163)||(16527901-16528002)
chr6 (16-80)||(15165786-15165850)
chr6 (10-197)||(15998488-15998676)
chr6 (18-53)||(16387213-16387248)
chr6 (22-97)||(22559176-22559250)
chr6 (76-165)||(22262359-22262448)
chr6 (17-49)||(10505043-10505075)
chr6 (16-80)||(15178100-15178164)
[»] scaffold0386 (2 HSPs)
scaffold0386 (18-232)||(8667-8882)
scaffold0386 (6-232)||(13017-13244)
[»] scaffold0171 (3 HSPs)
scaffold0171 (18-146)||(21425-21554)
scaffold0171 (90-151)||(6219-6280)
scaffold0171 (6-46)||(6324-6364)
[»] scaffold0185 (1 HSPs)
scaffold0185 (24-232)||(1386-1593)
[»] scaffold0337 (1 HSPs)
scaffold0337 (99-214)||(1626-1741)
[»] scaffold0065 (2 HSPs)
scaffold0065 (99-214)||(12062-12177)
scaffold0065 (6-80)||(12338-12413)
[»] scaffold1149 (1 HSPs)
scaffold1149 (16-192)||(1767-1943)
[»] scaffold0011 (1 HSPs)
scaffold0011 (6-163)||(228132-228288)
[»] scaffold0188 (1 HSPs)
scaffold0188 (10-113)||(26905-27009)
[»] scaffold0113 (1 HSPs)
scaffold0113 (6-108)||(47767-47869)


Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 20694813 - 20694582
Alignment:
Q  1 ccgttatccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20694813 ccgttatccttcatatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactg 20694714  T
Q  101 aattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20694713 aattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataa 20694614  T
Q  201 ctaaaaacatagcttaaagtatcatatgatgt 232  Q
    ||||||||||||||||||||||||||||||||    
T  20694613 ctaaaaacatagcttaaagtatcatatgatgt 20694582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 6 - 213
Target Start/End: Complemental strand, 26070642 - 26070435
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| ||||| || ||||  |||||||||||||||    
T  26070642 atccttcatgtgatgtcttgttttgccaatttacatgatttctcactaaaaagactcaaaacacttatggagttgcatgatttatgataaaactgaatta 26070543  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    || | ||||||||||||||||||| |||  |||||||||  |||||||| ||||||||||  | | | |||| |||| ||||||||| ||||||||||||    
T  26070542 cattaactcgaatgaaaacaatactaaattttcctcaaatgattgacaactcctctaaatgacctcttatttgccttaaaatgcaaagaaaataactaaa 26070443  T
Q  206 aacatagc 213  Q
    ||||||||    
T  26070442 aacatagc 26070435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 20083631 - 20083414
Alignment:
Q  10 ttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaa--gactcaaaacacatatgcagttgaataatttgggataaaactgaattaca 107  Q
    ||||| |||||| ||||||||||||||||||| |||| | ||||||||  |||||||||||| |||| | ||| || |||| ||||| ||||||||||||    
T  20083631 ttcacgtgatgttttgttttgccgatttacataatttttcactaaaaaaagactcaaaacacctatggaattgcatgatttaggatagaactgaattaca 20083532  T
Q  108 atgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaa 207  Q
    |  |||||||| ||||||||| |||| ||||||||||| |||||||| |||||| ||||  ||||||||| |||| ||||||||| ||||||| ||||||    
T  20083531 aatactcgaataaaaacaataaaaaatgttcctcaaactattgacaactcctct-aataatttttaatttgccttcaaatgcaaagaaaataattaaaaa 20083433  T
Q  208 catagcttaaagtatcata 226  Q
    |||||| |||| |||||||    
T  20083432 catagcctaaaatatcata 20083414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 213
Target Start/End: Complemental strand, 30790944 - 30790742
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||  ||| ||||| ||||||| ||||||||||||||||    
T  30790944 atccttcacatgatgtcttgtgttgccgatttacataatttttcactaaaaagactcaaaacaccaatgaagttggataatttaggataaaactgaatta 30790845  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
     || ||||| ||| |||||||     || ||| || ||||||||||||  |||||||| |  ||| | |||| | || ||||||||||||||||||||||    
T  30790844 taacgactcaaataaaaacaa-----aatgttactaaaaccattgacatctcctctaattgacttcttatttgctttcaaatgcaaataaaataactaaa 30790750  T
Q  206 aacatagc 213  Q
    ||||||||    
T  30790749 aacatagc 30790742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 19763842 - 19763982
Alignment:
Q  9 cttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaa 108  Q
    |||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||  ||| ||||| || |||| ||||||||||||| ||||     
T  19763842 cttcacttgatgtctcgttttgccgatttacatgatttctcactaaaaagactcaaaacac--atgaagttgcatgatttaggataaaactgaactacat 19763939  T
Q  109 tgactcgaatgaaaacaatacaaaaagttcctcaaaccattga 151  Q
    || ||| |||||||||||||||||||||||| |||||| ||||    
T  19763940 tgcctcaaatgaaaacaatacaaaaagttccacaaacccttga 19763982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 63 - 207
Target Start/End: Original strand, 23157792 - 23157936
Alignment:
Q  63 aaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctcta 162  Q
    ||||||| |||||| ||| || ||||  ||||||| |||||||||| ||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  23157792 aaaacacctatgcatttgcatgatttatgataaaagtgaattacaacgactcaaatgaaaacaataccaaaagttcctcaaaccattgacaactcctcta 23157891  T
Q  163 aatatcttttaattttcctttaaatgcaaataaaataactaaaaa 207  Q
    | |  ||| ||||||||||| ||||||||| ||||||||||||||    
T  23157892 attgacttctaattttccttcaaatgcaaagaaaataactaaaaa 23157936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 213
Target Start/End: Original strand, 25594664 - 25594846
Alignment:
Q  32 cgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaataca 130  Q
    ||||||||||||||||| |||| |||| |||||||||||||||| ||||| || |||| |||||||| |||| |||||  |||| | |||||||||||||    
T  25594664 cgatttacatgatttctcactataaaacactcaaaacacatatgaagttgcatcatttaggataaaaatgaaatacaacaactccagtgaaaacaataca 25594763  T
Q  131 aaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagc 213  Q
    | | ||||||||||||||||| ||||||||||| | || | | ||||  ||| ||||||||||||||  ||||||||||||||    
T  25594764 atatgttcctcaaaccattgagaaatcctctaactctcatcttatttgtcttcaaatgcaaataaaagtactaaaaacatagc 25594846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 165
Target Start/End: Original strand, 7742819 - 7742975
Alignment:
Q  9 cttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaa 108  Q
    |||||| |||||| ||||||| | |||||||||||||||| | |||||| ||||||||||||||||   ||  || |||| |||||||| ||||||||||    
T  7742819 cttcacgtgatgttttgttttactgatttacatgatttctcattaaaaaaactcaaaacacatatgattttacatgatttaggataaaagtgaattacaa 7742918  T
Q  109 tgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
     |||||||| ||||||||||||||| |||| ||||||||||||||| || |||||||    
T  7742919 agactcgaacgaaaacaatacaaaatgttcttcaaaccattgacaactcgtctaaat 7742975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 24410876 - 24411031
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  ||||||||| ||||||| ||| ||||||||||| |||||||| ||||||||||| |    ||||| |  |||| ||||||||||||||||    
T  24410876 atccttcatgtgatgtcttattttgccaattgacatgatttctcactaaaaatactcaaaacacctcgcaagttgcacgatttaggataaaactgaatta 24410975  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctct 161  Q
    ||| ||||| ||||||||||||||||||  ||||||||||||||||||| ||||||    
T  24410976 caacgactcaaatgaaaacaatacaaaattttcctcaaaccattgacaactcctct 24411031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 19331651 - 19331497
Alignment:
Q  32 cgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaa 131  Q
    ||||||||||||||||| || |||||||||||||||||||  | | ||| || |||| |||||||||| |||||||| |||||||||||| |||||||||    
T  19331651 cgatttacatgatttctcacaaaaaagactcaaaacacat--ggaattgcatgatttaggataaaactaaattacaacgactcgaatgaacacaatacaa 19331554  T
Q  132 aaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatg 188  Q
    |||||| ||||||| |||||||| |||||||| |   || ||||||||||| |||||    
T  19331553 aaagtttctcaaacaattgacaactcctctaattgaattctaattttccttcaaatg 19331497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 15697288 - 15697431
Alignment:
Q  11 tcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatg 110  Q
    ||||||||||||||||||| | ||||||  |||||||||| ||||||||||||||| || |||  || || || |||| ||||||||||||||| ||| |    
T  15697288 tcacatgatgtcttgttttacggatttatctgatttcttaataaaaagactcaaaatacctatagagatgcatgatttcggataaaactgaattgcaacg 15697387  T
Q  111 actcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
     ||| |||||||||||||||||||||||||| |||||| |||||    
T  15697388 tctcaaatgaaaacaatacaaaaagttcctctaaccatcgacaa 15697431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 213
Target Start/End: Original strand, 12339960 - 12340167
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| |||||||||| ||||  |||||| |||||| ||||||| |||| || ||||| ||||||| ||||| || || | | |||||||||||||    
T  12339960 atccttcacgtgatgtcttgatttgttgatttatatgattccttactacaaaacacgcaaaatacatatgaagttgcatgatctagtataaaactgaatt 12340059  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    |||||||| | | |||||| |||| || | |||||||||||||||||||| |||||||| | ||   | ||||  ||| ||||||||| ||||| |||||    
T  12340060 acaatgacacaagtgaaaataatataatatgttcctcaaaccattgacaactcctctaactctcaccttatttgtcttcaaatgcaaagaaaat-actaa 12340158  T
Q  205 aaacatagc 213  Q
    |||||||||    
T  12340159 aaacatagc 12340167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 158
Target Start/End: Complemental strand, 25680756 - 25680612
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||||||||||| ||||| |||| |||||||||||| |||||||||        |||||||| |||| ||||| || |||| | |||||| |||||||    
T  25680756 atccttcacatgatttcttggtttgtcgatttacatgaattcttacta--------caaaacacctatgaagttgcatgatttagaataaaattgaatta 25680665  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcc 158  Q
    ||| ||||||| |||||||||||||| | ||||||||||||||||| ||||||    
T  25680664 caacgactcgagtgaaaacaatacaatatgttcctcaaaccattgaaaaatcc 25680612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 154
Target Start/End: Complemental strand, 16634214 - 16634066
Alignment:
Q  7 tccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||||| |||||||||| |||| ||||||| ||||||||| |||  |||| | ||||||||| |||  ||||| || |||| | |||||| |||||||    
T  16634214 tccttcacgtgatgtcttgatttgtcgatttatatgatttctcactgcaaaacattcaaaacacctatagagttgcatgatttagaataaaagtgaatta 16634115  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    ||| ||||||| |||||||||||||| | ||| ||||||||||||||||    
T  16634114 caacgactcgagtgaaaacaatacaatatgtttctcaaaccattgacaa 16634066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 17381990 - 17382207
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||||| |||||||| |||| ||||||||||||||||| ||||        ||||||||  ||  ||||| || |||| |||||||| |||| ||    
T  17381990 atccttcacattatgtcttgatttgacgatttacatgatttctcacta--------caaaacactcataaagttgcatgatttaggataaaagtgaaata 17382081  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||| || | || |||||||||||||| | |||||||||||||||||||| |||||||| | || | | ||||  ||| ||||||||| ||||  ||||||    
T  17382082 caacgatttgagtgaaaacaatacaatatgttcctcaaaccattgacaactcctctaactctcatcttatttgtcttcaaatgcaaaaaaaagtactaaa 17382181  T
Q  206 aacatagcttaaagtatcatatgatg 231  Q
     |||||||  ||| ||||||||||||    
T  17382182 cacatagcaaaaaatatcatatgatg 17382207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 18222635 - 18222504
Alignment:
Q  33 gatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaa 131  Q
    ||||||||| ||| ||||||| |||| ||||||||||| |||| | ||| || |||| |||||||| |||||||||||||||||| | ||||||||||||    
T  18222635 gatttacataattacttactataaaacactcaaaacacctatggatttgcatgatttaggataaaagtgaattacaatgactcgagttaaaacaatacaa 18222536  T
Q  132 aaagttcctcaaaccattgacaaatcctctaa 163  Q
     | ||| |||||||||||||||| || |||||    
T  18222535 tatgtttctcaaaccattgacaactcatctaa 18222504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 24841922 - 24841765
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| || ||||||| |||  | ||||||||||||||| |||| |||| ||| ||||||| |||| ||||  || || | |||||||| ||| ||    
T  24841922 atccttcacgtgttgtcttgatttttcaatttacatgatttctcactacaaaacactaaaaacacctatggagttccatgatctaggataaaagtgactt 24841823  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctcta 162  Q
    |||| ||||||| |||||||||||||| | ||||||||||||||||| || |||||||    
T  24841822 acaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgaaaactcctcta 24841765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 211
Target Start/End: Complemental strand, 24517514 - 24517317
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| |||||| ||| ||| |||||||||||||||||||| ||        |||||||| |||| ||||  || |||  |||||||  |||||||    
T  24517514 atccttcacgtgatgtattgatttaccgatttacatgatttcttatta--------caaaacacctatggagttacatgattaaggataaatgtgaatta 24517423  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||| ||||||  |||||||||||||| | |||||||||||||||||||| |||||||| | || | | ||||  ||| |||||||||  ||| |||||||    
T  24517422 caacgactcgggtgaaaacaatacaatatgttcctcaaaccattgacaactcctctaattctcatcttatttgtcttcaaatgcaaagcaaagaactaaa 24517323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 15205809 - 15205588
Alignment:
Q  9 cttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattaca 107  Q
    ||||||| ||||| ||| ||||  ||||||||| ||| || |||  |||| ||||||||||| |||| | ||| || || | ||| ||||||||||||||    
T  15205809 cttcacaagatgttttgatttgatgatttacattattcctcactgcaaaacactcaaaacacctatggaattgcatgatctaggagaaaactgaattaca 15205710  T
Q  108 atgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat-atcttttaattttcctttaaatgcaaataaaata-actaaa 205  Q
    | ||||||| |||||||||||||| | ||||||||||||| |||||| |||| ||| | |||||   ||||   ||||||||||||||||| | ||||||    
T  15205709 acgactcgagtgaaaacaatacaatatgttcctcaaaccactgacaactcctttaactcatctt---atttgtatttaaatgcaaataaaaaatactaaa 15205613  T
Q  206 aacatagcttaaagtatcatatgatg 231  Q
    ||||||| | ||| ||||||||||||    
T  15205612 aacatag-tcaaaatatcatatgatg 15205588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 25367737 - 25367654
Alignment:
Q  31 ccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactc 114  Q
    |||||||||||||||||| |||||||||||||||||||| |||| ||||| || ||||  |||||||||||||| ||| |||||    
T  25367737 ccgatttacatgatttctcactaaaaagactcaaaacacctatgaagttgcatgatttatgataaaactgaatttcaacgactc 25367654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 18178241 - 18178126
Alignment:
Q  34 atttacatgatttcttactaaaaagactcaaaacacatatgcagttg-aataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaa 132  Q
    ||||||||||||||| |||||||||||| |||| || |||| ||||| ||| |||| ||||||||||||||||||| |||  ||||||||||  ||||||    
T  18178241 atttacatgatttctcactaaaaagactaaaaatacctatgaagttgcaatgatttaggataaaactgaattacaacgacctgaatgaaaac--tacaaa 18178144  T
Q  133 aagttcctcaaaccattg 150  Q
    | |||| |||||| ||||    
T  18178143 atgttcatcaaactattg 18178126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 227
Target Start/End: Complemental strand, 24130744 - 24130602
Alignment:
Q  85 atttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttccttta 184  Q
    ||||| ||||||| ||||| | ||  ||||||| || | | |||||||| |||||||||||||||||||||| |||||| |  | | | |||| |||| |    
T  24130744 atttgtgataaaagtgaatcataactactcgaacgacagccatacaaaatgttcctcaaaccattgacaaatgctctaattgacctcttatttgccttaa 24130645  T
Q  185 aatgcaaataaaataactaaaaacatagcttaaagtatcatat 227  Q
    |||||||||| |||||||| ||||||||| |||| ||||||||    
T  24130644 aatgcaaatacaataactataaacatagcctaaaatatcatat 24130602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 17027686 - 17027470
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactc 114  Q
    |||||||||| |||  ||||||||||||||||| |    |||| | ||||||||| |||| |||||  | |||| |||||||| |||||||||| |||||    
T  17027686 tgatgtcttgatttttcgatttacatgatttctcatggcaaaacagtcaaaacacctatggagttgcgtgatttaggataaaagtgaattacaacgactc 17027587  T
Q  115 gaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatc-ttttaattttcctttaaatgcaaataaaataactaaaaacatagc 213  Q
     | |||||||||| ||| | |||||||||||| ||||| |  ||||||| | || | |||||| | ||||||||||||| ||||  ||||||||||||||    
T  17027586 aagtgaaaacaattcaatatgttcctcaaacccttgaccacgcctctaactctcatcttaattgt-ctttaaatgcaaagaaaagtactaaaaacatagc 17027488  T
Q  214 ttaaagtatcatatgatg 231  Q
      ||| | ||||||||||    
T  17027487 caaaaatgtcatatgatg 17027470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 22229973 - 22229828
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| |||||||||| ||||  ||||||||||||| || |||| |||| || |||||||| | || ||||| ||  | | |||||||||||||||    
T  22229973 atccttcacgtgatgtcttgatttgttgatttacatgattcctcactacaaaatacccaaaacacttgtggagttgcatggtctaggataaaactgaatt 22229874  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattg 150  Q
    |||| ||||| | |||||||||||||| |  ||||| |||||||||    
T  22229873 acaacgactcaagtgaaaacaatacaatacattccttaaaccattg 22229828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 230
Target Start/End: Original strand, 22967845 - 22968013
Alignment:
Q  62 caaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctct 161  Q
    |||||||| |||| ||||  || ||||  |||| || ||||||||| ||||| ||||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  22967845 caaaacacctatgaagtttcattatttatgatacaagtgaattacattgacttgaatgaaaacagtacaatatgttcctcaaaccattcacaactcctct 22967944  T
Q  162 aaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgat 230  Q
    |||   | | | ||||  ||| | ||||||| ||||  |||||||||||||| |||| |||||||||||    
T  22967945 aaaatccatcttatttgtcttaacatgcaaagaaaactactaaaaacatagcctaaaatatcatatgat 22968013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 11274276 - 11274426
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  |||||||||| |||| |||| ||||||||||||||||| |||| ||||||||||| |||| ||||| || |||| ||||||||   | ||    
T  11274276 atccttcatgtgatgtcttgatttgtcgatatacatgatttcttactacaaaacactcaaaacacctatggagttgcatgatttaggataaaagcaagtt 11274375  T
Q  105 acaatgactcgaatgaaaacaatacaaaaag-ttcctcaaaccattgacaa 154  Q
     ||| | ||| | |||||||||||||| | | || ||||||||||||||||    
T  11274376 gcaacggctcaagtgaaaacaatacaatatgttttctcaaaccattgacaa 11274426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 25075258 - 25075327
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatg 74  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||||| |||| ||||||||||| ||||    
T  25075258 atccttcacatgatgtcttgatttgatgatttacatgatttcttactacaaaacactcaaaacacctatg 25075327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 25133227 - 25133296
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatg 74  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||||| |||| ||||||||||| ||||    
T  25133227 atccttcacatgatgtcttgatttgatgatttacatgatttcttactacaaaacactcaaaacacctatg 25133296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 22643945 - 22644033
Alignment:
Q  140 tcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatg 228  Q
    ||||||||||||||| ||||||||||  ||| ||||||||||| |||| |||| |||||||||||||| ||| || ||| ||| |||||    
T  22643945 tcaaaccattgacaactcctctaaatgacttctaattttccttcaaatacaaagaaaataactaaaaatatacctaaaaatattatatg 22644033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 24268639 - 24268575
Alignment:
Q  90 ggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    |||||||| ||||||| |||||||||| |||||||||||||| | |||||||||||||| |||||    
T  24268639 ggataaaagtgaattataatgactcgagtgaaaacaatacaagatgttcctcaaaccatcgacaa 24268575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 24345268 - 24345204
Alignment:
Q  90 ggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    |||||||| ||||||| |||||||||| |||||||||||||| | |||||||||||||| |||||    
T  24345268 ggataaaagtgaattataatgactcgagtgaaaacaatacaagatgttcctcaaaccatcgacaa 24345204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 24846340 - 24846208
Alignment:
Q  95 aaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaata 194  Q
    ||||| |||||| || ||||||||||||| |||| ||||  ||||||||||||| || |||||||||||||  | | | ||||  ||| ||||||||| |    
T  24846340 aaactaaattacgataactcgaatgaaaaaaatataaaatattcctcaaaccatggaaaaatcctctaaatgacctcttatttgtcttcaaatgcaaaga 24846241  T
Q  195 aaataactaaaaacatagcttaaagtatcatat 227  Q
    || |||||||||| ||||| ||||  |||||||    
T  24846240 aagtaactaaaaatatagcctaaaacatcatat 24846208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 16603590 - 16603709
Alignment:
Q  37 tacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaa-a 134  Q
    |||||||||||| |||| |||| ||||||||||| |||| | ||| || |||| || ||||| | |||||||| ||||||||| ||||||||| |||| |    
T  16603590 tacatgatttctcactagaaaacactcaaaacacctatgaaattgcatgatttaggctaaaatttaattacaacgactcgaatcaaaacaataaaaaaga 16603689  T
Q  135 gttcctcaaaccattgacaa 154  Q
    |||||||||| ||| |||||    
T  16603690 gttcctcaaatcatcgacaa 16603709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 11997851 - 11997968
Alignment:
Q  17 gatgtcttgttttgccgatttacatgatttcttact-aaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    ||||||||| | |||||||||||||| ||||| ||| ||||| ||||||||||| |||| ||||| || |||| | ||||||   |||| |||||||  |    
T  11997851 gatgtcttgctctgccgatttacatgttttctcactaaaaaaaactcaaaacacctatgaagttgcatgatttagtataaaaggaaattgcaatgacctg 11997950  T
Q  116 aatgaaaacaatacaaaa 133  Q
    ||| ||||||||||||||    
T  11997951 aataaaaacaatacaaaa 11997968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 231
Target Start/End: Original strand, 16622670 - 16622838
Alignment:
Q  62 caaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctct 161  Q
    |||||||| |||| ||||| || || | |||||||| || |||||||  | | || |||| ||||||||| | |||||||||||||||||||| |||| |    
T  16622670 caaaacacctatgaagttgcatgatctaggataaaagtgtattacaacaaatagagtgaatacaatacaacatgttcctcaaaccattgacaactccttt 16622769  T
Q  162 aaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgatg 231  Q
    || | | ||   ||||  ||| ||||| ||| ||||| ||||||||||||||| ||| ||||||||||||    
T  16622770 aactcttttcgtatttgtcttcaaatgtaaaaaaaat-actaaaaacatagctaaaattatcatatgatg 16622838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 24279582 - 24279635
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacac 69  Q
    ||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||    
T  24279582 tgatgtcttgttttgtcgatttatatgatttctcactaaaatgactcaaaacac 24279635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 24382632 - 24382579
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacac 69  Q
    ||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||    
T  24382632 tgatgtcttgttttgtcgatttatatgatttctcactaaaatgactcaaaacac 24382579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 22755051 - 22754963
Alignment:
Q  18 atgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||||| ||||  |||||||||||||||| |||  |||| ||||||||||| |||| ||||| ||||| | ||||||||||||||||    
T  22755051 atgtcttgatttgatgatttacatgatttctcacttcaaaacactcaaaacacctatgaagttgcataatctaggataaaactgaatta 22754963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 25942214 - 25942149
Alignment:
Q  101 aattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaata 166  Q
    |||||||| ||||||| |||||| |||| |||| | |||||||||||||||||| || ||||||||    
T  25942214 aattacaacgactcgattgaaaataatataaaatgctcctcaaaccattgacaactcttctaaata 25942149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 29150882 - 29150977
Alignment:
Q  35 tttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaa 131  Q
    |||||| ||||||| |||||||| ||||||||||| |||| | ||| || ||||  ||||||| ||||||||||||| || | |||||| |||||||    
T  29150882 tttacaagatttctcactaaaaa-actcaaaacacttatgaaattgcatgatttaagataaaaatgaattacaatgattcaagtgaaaataatacaa 29150977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 64
Target Start/End: Complemental strand, 25943733 - 25943702
Alignment:
Q  33 gatttacatgatttcttactaaaaagactcaa 64  Q
    ||||||||||||||||||||||||||||||||    
T  25943733 gatttacatgatttcttactaaaaagactcaa 25943702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 26330015 - 26330163
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  |||||||||| |||  | ||||||||||||||  |||| |||| ||||||||||| |||| ||||| || || | ||||||||  |||||    
T  26330015 atccttcatgtgatgtcttgatttttcaatttacatgatttc--actacaaaacactcaaaacacctatgaagttgcatgatctaggataaaagggaatt 26330112  T
Q  105 acaa-tgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    |||| || ||| | |||||||||||||| |  ||||| | |||||||||||    
T  26330113 acaactggctcaagtgaaaacaatacaatatattccttagaccattgacaa 26330163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 4325351 - 4325431
Alignment:
Q  53 aaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaa 133  Q
    ||||||||||||||||| |||    ||| |||||| ||||  ||| | ||||||||||| |||||| ||||||||||||||    
T  4325351 aaaaagactcaaaacacctataggattgcataattagggaagaaattaaattacaatgattcgaataaaaacaatacaaaa 4325431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 10702677 - 10702709
Alignment:
Q  101 aattacaatgactcgaatgaaaacaatacaaaa 133  Q
    |||||||||||||| ||||||||||||||||||    
T  10702677 aattacaatgactcaaatgaaaacaatacaaaa 10702709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 17695412 - 17695464
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaaca 68  Q
    |||| |||||||||||   |||||||||||| | |||||||||||||||||||    
T  17695412 tgatttcttgttttgctactttacatgatttttcactaaaaagactcaaaaca 17695464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 22643851 - 22643919
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatg 74  Q
    ||||| ||| || ||||||||||||||||| | |||||||||| ||||| ||||| ||| |||| ||||    
T  22643851 atcctccacttggtgtcttgttttgccgatatgcatgatttctcactaacaagacacaagacacctatg 22643919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 19541205 - 19540979
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||| |||| ||||| || |||| ||||||||||||||||    
T  19541205 atccttcacttgatgtcttattttgccgatttacatgatttctcactagaaagactcaaaacacctatggagttgcatgatttaggataaaactgaatta 19541106  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||||||||||| |||||  ||||||||||||||||||||||||| |||| |||| || |||  || ||||||||||| ||||||||| ||||||||||||    
T  19541105 caatgactcgattgaaataaatacaaaaagttcctcaaaccattaacaactcctatatataaattctaattttccttcaaatgcaaagaaaataactaaa 19541006  T
Q  206 aacatagcttaaagtatcatatgatgt 232  Q
    |||||||   ||| | |||||||||||    
T  19541005 aacataggcaaaaatctcatatgatgt 19540979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 17 - 228
Target Start/End: Complemental strand, 24047539 - 24047328
Alignment:
Q  17 gatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcga 116  Q
    |||||||||||||||||||||  | ||||||| ||||||| ||| |||||  | |||| ||||| ||||||| |||||||| ||||||||||||||||||    
T  24047539 gatgtcttgttttgccgatttgtaggatttctcactaaaatgacccaaaatgcctatggagttgcataatttaggataaaagtgaattacaatgactcga 24047440  T
Q  117 atgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagctta 216  Q
    ||||||||||||||||| |||||| ||||||||||||| | ||||||||| | | | ||||||||| |||||||||||||||||||||||||||||| ||    
T  24047439 atgaaaacaatacaaaatgttccttaaaccattgacaatttctctaaataacctcttattttccttcaaatgcaaataaaataactaaaaacatagccta 24047340  T
Q  217 aagtatcatatg 228  Q
    || |||||||||    
T  24047339 aaatatcatatg 24047328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 18236249 - 18236474
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  ||||||||||||||||||| ||||||||||||| ||||||||||||||||| || |||| ||||| || ||||  ||||||| |||||||    
T  18236249 atccttcatgtgatgtcttgttttgccgagttacatgatttctcactaaaaagactcaaaatacttatggagttgcatgatttaagataaaagtgaatta 18236348  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
     ||  |||||||||||||||||| |||  ||| |||||||||||||||| | || |||||  |  ||  ||| |||| ||||||||| ||||||||||||    
T  18236349 taacaactcgaatgaaaacaatataaattgtttctcaaaccattgacaacttctataaattacaatttctttgccttcaaatgcaaagaaaataactaaa 18236448  T
Q  206 aacatagcttaaagtatcatatgatg 231  Q
    |||||||| |||| ||||||||||||    
T  18236449 aacatagcataaaatatcatatgatg 18236474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 6 - 228
Target Start/End: Original strand, 22388704 - 22388921
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| | ||||| | ||||||| ||||||||||||||| ||| ||||||||||||| |    || ||||| || |||  ||||||||||| ||||    
T  22388704 atccttcacgtaatgtcatattttgccaatttacatgatttctcactgaaaagactcaaaaaa----tgaagttgcatgattcaggataaaactggatta 22388799  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||||||||| ||||||||||||| |||||||||||||||  |||||||| |||||||| |  ||| |||||| |||| ||||||||| |||||| |||||    
T  22388800 caatgactcaaatgaaaacaata-aaaaagttcctcaaattattgacaactcctctaattgacttctaatttgccttcaaatgcaaagaaaatatctaaa 22388898  T
Q  206 aacatagcttaaagtatcatatg 228  Q
    ||||||||| |||  ||||||||    
T  22388899 aacatagctaaaaacatcatatg 22388921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 17152322 - 17152162
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||   ||||| || | ||  ||||||| | ||||    
T  17152322 atccttcacacgatgtcttgttttgccgatttacatgatttcttactaaaaaaaactcaaaacacttacagagttgcatgaattacgataaaagttaatt 17152223  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    |||| |||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||    
T  17152222 acaacgactcgaatgaaaataatacaaaatattcctcaaaccattgacaactcctctaaat 17152162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 155
Target Start/End: Original strand, 21849020 - 21849168
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  |||||||||||| | ||||||||||| |||||| |||||||||||||||||  | |||| ||||| || ||||  |||||||||||||||    
T  21849020 atccttcatgtgatgtcttgttcttccgatttacattatttctcactaaaaagactcaaaaatcctatggagttgcatgatttatgataaaactgaatta 21849119  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaa 155  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||||||    
T  21849120 caatgactc-aaagaaaacaatacaaaatgttcctcaaaccattgacaaa 21849168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 17240813 - 17241019
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    ||||||||||||||||| ||||| ||||||| | |||||||| ||||||  ||| |||| ||||| || |||| | |||||||| |||||| | ||||||    
T  17240813 tgatgtcttgttttgccaatttatatgatttttcactaaaaacactcaa--cacctatgaagttgcatgatttagaataaaactaaattacgacgactcg 17240910  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagctt 215  Q
    ||||||||||||| ||||||| |||||||| |||||||| |  |||||||  ||||||||||  ||| ||| ||||| ||||||| |||||||||||| |    
T  17240911 aatgaaaacaatagaaaaagt-cctcaaactattgacaacttatctaaatgacttttaatttgtcttcaaaggcaaagaaaataagtaaaaacatagcct 17241009  T
Q  216 aaagtatcat 225  Q
    ||| ||||||    
T  17241010 aaaatatcat 17241019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 18818865 - 18818679
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| | |||||||||| |||||   |||| | ||| || ||||  ||||||||| ||||     
T  18818865 atccttcacgtgatgccttgttttgccgatttacatgatttctcaataaaaagactgaaaacgtctatggacttgcatgatttatgataaaactaaattt 18818766  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaa 192  Q
    ||| ||||| ||||||||||||| |||| |||||| ||||||| | |||||||| |||||| ||| |||||| |||| |||||||||    
T  18818765 caacgactcaaatgaaaacaatataaaatgttccttaaaccatcggcaaatcctttaaatagcttataatttgccttaaaatgcaaa 18818679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 31450121 - 31449905
Alignment:
Q  10 ttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaat 109  Q
    |||||| | ||||||  |||||||| | ||||||||| | | |||||| ||||||||||| |||  ||||| ||||||  |||  ||||||| ||| |||    
T  31450121 ttcacaaggtgtctttctttgccgaatcacatgatttatcaataaaaatactcaaaacacctataaagttgcataattaaggaataaactgatttataat 31450022  T
Q  110 gactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaaca 209  Q
    ||||| |||||||| |||||||||  ||||| |||||||  |||| ||||||||||  ||| ||| ||  ||| ||||||||||||||||||||||||||    
T  31450021 gactctaatgaaaaaaatacaaaatattcctaaaaccatctacaactcctctaaatgacttataaattgtcttcaaatgcaaataaaataactaaaaaca 31449922  T
Q  210 tagcttaaagtatcata 226  Q
    ||||||||| |||||||    
T  31449921 tagcttaaaatatcata 31449905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 152
Target Start/End: Original strand, 34063787 - 34063938
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttact-----aaaaagactcaaaacacatatgcagttgaataatttgggataaaactg 100  Q
    |||||||||| ||||||||||||||||||||||||||| |||| |||     ||||| ||||||||||| | || ||||| || |||| |||||| | ||    
T  34063787 atccttcacacgatgtcttgttttgccgatttacatgaattctcactcaaaaaaaaaaactcaaaacacttgtggagttgcatgatttaggataatagtg 34063886  T
Q  101 aattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgac 152  Q
    ||||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  34063887 aattacaacaactcgaatgaaaacaatacaaaaagttccacaaaccattgac 34063938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 232
Target Start/End: Original strand, 32276504 - 32276686
Alignment:
Q  50 actaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccatt 149  Q
    ||||||| ||||||||||||  ||| |||||||| |||| | |||||  | |||||||||||||||||| |||||||| ||||| |||| ||||||||||    
T  32276504 actaaaaggactcaaaacacccatggagttgaatgatttagaataaacttcaattacaatgactcgaataaaaacaatgcaaaatgttcttcaaaccatt 32276603  T
Q  150 gacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgatgt 232  Q
    ||||  |||| |||||  | | | ||||||||| ||||||||| |||||||||||||||||| |  |||||| ||||||||||    
T  32276604 gacatctcctttaaatgacctcttattttccttcaaatgcaaagaaaataactaaaaacatatccaaaagtaccatatgatgt 32276686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 91 - 208
Target Start/End: Original strand, 17415227 - 17415344
Alignment:
Q  91 gataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgca 190  Q
    ||||||||| ||||||||| | |||||||||||||||||||||| |||||||| |||||||||| ||||||||||  ||| ||||||||||| ||| | |    
T  17415227 gataaaactaaattacaatcaatcgaatgaaaacaatacaaaaatttcctcaacccattgacaactcctctaaatgacttctaattttccttcaaaagta 17415326  T
Q  191 aataaaataactaaaaac 208  Q
    || |||||| ||||||||    
T  17415327 aagaaaatagctaaaaac 17415344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 153
Target Start/End: Complemental strand, 24188138 - 24187987
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataa---tttgggataaaactga 101  Q
    ||||||||  ||||| |||| || | ||||||||||||||||| |||| |||| ||||||||||||| || |||||||| |   ||| |||||||| |||    
T  24188138 atccttcatgtgatgccttgattggtcgatttacatgatttctcactacaaaatactcaaaacacatttggagttgaatgaatatttaggataaaagtga 24188039  T
Q  102 attacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgaca 153  Q
    || ||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  24188038 atcacaatgactcgaatgaatacaatacaaaaagttccttaaaccaatgaca 24187987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 18117135 - 18116992
Alignment:
Q  21 tcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatga 120  Q
    |||||||||||||||||||||||||| ||  |||||||| |||||||||  |   ||||| || |||| |||| ||| |||||||||||||||| |||||    
T  18117135 tcttgttttgccgatttacatgattttttgttaaaaagattcaaaacaccaacctagttgcattattt-ggattaaagtgaattacaatgactcaaatga 18117037  T
Q  121 aaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    ||||||||||||| |||| |||||||||   ||||||||||||||    
T  18117036 aaacaatacaaaatgttcgtcaaaccatgaccaaatcctctaaat 18116992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 27917929 - 27918083
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaa-aagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  |||||||||| |||| ||||| |||||||||||||||| | || | ||||||||| |||| ||||| || |||| | |||||| ||||||    
T  27917929 atccttcatctgatgtcttgatttgtcgattgacatgatttcttactatagaatagtcaaaacacctatggagttgcatgatttagtataaaagtgaatt 27918028  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcct 159  Q
    |||| ||||| ||||||||||||||  || ||||||||||||| |||||| ||||    
T  27918029 acaacgactcaaatgaaaacaatacccaacgttcctcaaaccaatgacaactcct 27918083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 32 - 231
Target Start/End: Original strand, 21505111 - 21505311
Alignment:
Q  32 cgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaataca 130  Q
    |||||||||||||| || |||| |||| ||||||||||  || | ||||| || |||| |||||||| | ||||| || ||||||| |||||||||||||    
T  21505111 cgatttacatgattcctcactacaaaacactcaaaacatctaagaagttgcatgatttaggataaaagtaaattataaagactcgagtgaaaacaataca 21505210  T
Q  131 aaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgat 230  Q
    | | | |||||||||||||||||| | |||||| | || | | ||||  ||| ||||||||| ||||  ||||||||||||||  ||| |||||||||||    
T  21505211 atatgctcctcaaaccattgacaactactctaactctcatcttatttgtcttcaaatgcaaagaaaaatactaaaaacatagccaaaaatatcatatgat 21505310  T
Q  231 g 231  Q
    |    
T  21505311 g 21505311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 30998940 - 30998782
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| |||| ||||| |||| |||||||||| | |  | |||| |||| ||||||||||| |||| ||||| || || | ||||||||||||| |    
T  30998940 atccttcacttgatatcttgatttgtcgatttacatcactcttcactacaaaacactcaaaacacctatggagttgtatgatctaggataaaactgaagt 30998841  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    |||| ||||| | |||||||||||||| | |||||||||||||||||||| || |||||    
T  30998840 acaacgactcaagtgaaaacaatacaatatgttcctcaaaccattgacaactcatctaa 30998782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 39730615 - 39730474
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||| |    ||||| || |||| |||||||| |||||||    
T  39730615 atccttcatgtgatgtcttgttttgctgatttatatgatttctcactaaaaatactcaaaacacctgcagagttgcatgatttaggataaaagtgaatta 39730516  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaacca 147  Q
    ||| |||| |||| ||||| ||| |||| |||||| ||||||    
T  39730515 caacgacttgaataaaaactatagaaaatgttccttaaacca 39730474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 17415109 - 17415177
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatg 74  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  17415109 atccttcacgtgatgtcttgttttgccgatttacacgatttctcactaaaaagactcaaaacacctatg 17415177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 165
Target Start/End: Original strand, 21843006 - 21843108
Alignment:
Q  63 aaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctcta 162  Q
    ||||||| |||  ||||| || |||| |||||||| | ||||||||||||||||||||||||||||||| | |||||| ||||||||| ||| |||||||    
T  21843006 aaaacacctatagagttgcatgatttaggataaaagtaaattacaatgactcgaatgaaaacaatacaacatgttcctaaaaccattggcaactcctcta 21843105  T
Q  163 aat 165  Q
    |||    
T  21843106 aat 21843108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 31262153 - 31262008
Alignment:
Q  19 tgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaat 118  Q
    |||||||||||||| ||||| |||| |||| |||||||||||| ||||||| | || ||||| ||  ||||| ||||||||||||||||| | |  |||     
T  31262153 tgtcttgttttgccaatttagatgaattctcactaaaaagacttaaaacacctgtgaagttgcatggtttgg-ataaaactgaattacaacgtccagaaa 31262055  T
Q  119 gaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    ||||| ||||||||| |||  | ||||||||||||| ||||||||||    
T  31262054 gaaaataatacaaaatgtttgttaaaccattgacaactcctctaaat 31262008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 228
Target Start/End: Original strand, 29647577 - 29647714
Alignment:
Q  91 gataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgca 190  Q
    ||||||| |||||||||| ||||| ||||||||||||| ||||||||||||||| || |||||| | |||||| |  ||| |||||| |||| |||||||    
T  29647577 gataaaagtgaattacaacgactcaaatgaaaacaatataaaaagttcctcaaatcaatgacaactactctaattgacttctaatttgccttcaaatgca 29647676  T
Q  191 aataaaataactaaaaacatagcttaaagtatcatatg 228  Q
    |||||    ||||| ||||||||| |||  ||||||||    
T  29647677 aataattacactaacaacatagctaaaaacatcatatg 29647714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 231
Target Start/End: Original strand, 28278396 - 28278594
Alignment:
Q  33 gatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaa 131  Q
    |||||||||| |||||||| | |||| ||| |||| |  |||| ||||| || || | |||||||| |||||||||| ||||| | |||||| ||||||     
T  28278396 gatttacatgctttcttaccacaaaacacttaaaatatctatggagttgcatgatctaggataaaagtgaattacaacgactcaagtgaaaataatacac 28278495  T
Q  132 aaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgatg 231  Q
     | |||| |||||||||||| ||||||||||| | |||| | |||| |||| ||||||||| ||||  ||| ||||||||||  ||| ||||||||||||    
T  28278496 tatgttcttcaaaccattgagaaatcctctaactctcttcttatttgccttcaaatgcaaagaaaagtact-aaaacatagcaaaaaatatcatatgatg 28278594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 163
Target Start/End: Complemental strand, 35707969 - 35707814
Alignment:
Q  9 cttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattaca 107  Q
    ||||||||||||||||| |||   ||||||||||||| || |||| |||| ||||||||||| |||| ||| |   ||| | ||||||||||||||||||    
T  35707969 cttcacatgatgtcttgattttatgatttacatgattcctcactacaaaacactcaaaacacctatgaagtcgtgcaatctaggataaaactgaattaca 35707870  T
Q  108 atgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    |  | || | |||||||||||||| | ||| |||||||||||||||| | ||||||    
T  35707869 acaaatcaagtgaaaacaatacaacatgtttctcaaaccattgacaacttctctaa 35707814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 213
Target Start/End: Complemental strand, 25474203 - 25473997
Alignment:
Q  9 cttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattaca 107  Q
    ||||||||||||||||| ||||  ||||||||||||| || |||| |||| | ||||||||| | || ||||| || || | |||||| |||||||||||    
T  25474203 cttcacatgatgtcttgatttgatgatttacatgattcctcactacaaaacagtcaaaacacctttggagttgcatgatctaggataatactgaattaca 25474104  T
Q  108 atgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaat-aactaaaa 206  Q
      | || || ||||| |||| ||| | ||||||||||| |||||||| |||||||| | || | | ||||  ||| ||||| |||||||||  |||||||    
T  25474103 gcgtcttgagtgaaaccaattcaatatgttcctcaaacaattgacaactcctctaactctcatcttatttgtcttcaaatgaaaataaaatgtactaaaa 25474004  T
Q  207 acatagc 213  Q
    |||||||    
T  25474003 acatagc 25473997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 21844646 - 21844735
Alignment:
Q  76 agttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    ||||| || |||| |||||| | | |||||||||||||||||||||||||||| || | |||||| ||||||||||||| ||||||||||    
T  21844646 agttgcatgatttaggataagagtaaattacaatgactcgaatgaaaacaatataacatgttcctaaaaccattgacaactcctctaaat 21844735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 1732719 - 1732655
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacaca 70  Q
    ||||||||  ||||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  1732719 atccttcatgtgatgtcttgttttgtcaatttacatgatttcttaccaaaaagactcaaaacaca 1732655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 16593696 - 16593852
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    |||||||| ||||||||||| ||||  |||||||||||||  | |||| |||| ||||| ||||| |||| ||||| || || | |||||||||||||||    
T  16593696 atccttcaaatgatgtcttgatttgatgatttacatgattcttcactacaaaacactcagaacacctatggagttgcatgatctaggataaaactgaatt 16593795  T
Q  105 acaatgactcgaatgaaaacaatacaaaa--agttcctcaaaccattgacaaatcct 159  Q
    | ||  |||||| ||||||||||| || |   |||| ||||||||||||||| ||||    
T  16593796 aaaacaactcgagtgaaaacaatataatatgtgttcatcaaaccattgacaactcct 16593852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 34077096 - 34076979
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    |||||||||| |||||| | ||||||||||||| ||||||| ||||||||| || |||| |||||   | |||| ||  |||  ||||||||  ||||||    
T  34077096 tgatgtcttggtttgccaaattacatgatttctcactaaaatgactcaaaagacttatgaagttgtcgattttgagaataaatggaattacatggactcg 34076997  T
Q  116 aatgaaaacaatacaaaa 133  Q
    ||||||||||||||||||    
T  34076996 aatgaaaacaatacaaaa 34076979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 162
Target Start/End: Complemental strand, 35031843 - 35031714
Alignment:
Q  34 atttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaa 132  Q
    ||||| |||||| || |||| |||| ||||||||||| |||| | ||| || || | |||||||| | | |||||| ||||||| ||||||||||||||     
T  35031843 atttatatgattcctgactacaaaacactcaaaacacctatggaattgcatgatctaggataaaagtaagttacaacgactcgagtgaaaacaatacaat 35031744  T
Q  133 aagttcctcaaaccattgacaaatcctcta 162  Q
    | ||||||||||||||| |||| |||||||    
T  35031743 atgttcctcaaaccattaacaactcctcta 35031714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 14921988 - 14922044
Alignment:
Q  9 cttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaa 65  Q
    ||||||||||||| ||||||| |||||||||||||||||| || |||||||||||||    
T  14921988 cttcacatgatgtattgtttttccgatttacatgatttctcacgaaaaagactcaaa 14922044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 15829290 - 15829145
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| |||||||||| |||| ||||||||||||||||| |||         ||||||||||||| ||||| || |||| |||||||    | |||    
T  15829290 atccttcacgtgatgtcttgatttgtcgatttacatgatttctcact--------gcaaaacacatatggagttgcatgatttaggataaa----agtta 15829203  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    ||| ||||  | ||||||||||||||   |||||||||||||||||||| ||||||||    
T  15829202 caacgacttaagtgaaaacaatacaatgcgttcctcaaaccattgacaactcctctaa 15829145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 22511110 - 22510929
Alignment:
Q  10 ttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaa 108  Q
    ||||| |||||||||| |||  ||||||||||||||||| |||| |||| | ||||||||| |||  ||||| | ||||| |||||||  | |||||||     
T  22511110 ttcacttgatgtcttgatttttcgatttacatgatttctcactacaaaacaatcaaaacac-tatatagttgcacaatttaggataaacgtaaattacag 22511012  T
Q  109 tgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaa 192  Q
     |||||||||||||| ||||| |||||||||| |||||| ||  |  |||||||| |  ||| |||||| |||| |||||||||    
T  22511011 cgactcgaatgaaaaaaatac-aaaagttcctaaaaccaatggaagctcctctaatttacttataatttgccttcaaatgcaaa 22510929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 1733184 - 1733111
Alignment:
Q  90 ggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    ||||||||||||||||||| ||||| ||||||||||||||||   ||| |||||  ||||||||| ||||||||    
T  1733184 ggataaaactgaattacaacgactcaaatgaaaacaatacaatttgtttctcaactcattgacaactcctctaa 1733111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 15454485 - 15454636
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  ||||||||||||||||  ||||||| ||||||| |||||||| |||||||||||        ||| || |||| |||||||| |||| ||    
T  15454485 atccttcatgtgatgtcttgttttgctaatttacacgatttctcactaaaaaaactcaaaacac-------cttgcatgatttaggataaaaatgaa-ta 15454576  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    ||| ||||| || ||||||||||||||| | |||| ||| ||| ||||| |||| |||||    
T  15454577 caacgactcaaaagaaaacaatacaaaatgatccttaaagcatagacaactcctttaaat 15454636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 27417209 - 27417301
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaa 97  Q
    ||||||||  |||||||||| |||| ||||||||||||||||| |||| |||| ||| ||||||| |||| ||||| || |||| ||||||||    
T  27417209 atccttcatgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacacttaaaacacctatggagttgcatgatttaggataaaa 27417301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 32703892 - 32704008
Alignment:
Q  17 gatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcga 116  Q
    ||||||||||||||| || |||||| |||| | | |||||||| ||||||||| |||| ||||| ||| || | ||  |||| | ||||||| ||||| |    
T  32703892 gatgtcttgttttgcggaattacataatttatcaataaaaagattcaaaacacttatgaagttgtatagttagagaagaaaccggattacaacgactcaa 32703991  T
Q  117 atgaaaacaatacaaaa 133  Q
    ||||||| |||||||||    
T  32703992 atgaaaataatacaaaa 32704008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 22525736 - 22525805
Alignment:
Q  143 aaccattgacaaatcctctaaatatcttttaattttcctttaaa-tgcaaataaaataactaaaaacata 211  Q
    |||||||||||| ||||||||||  ||| |||||| |||| ||| |||||| ||||||||||||||||||    
T  22525736 aaccattgacaactcctctaaatgacttctaatttgccttcaaattgcaaagaaaataactaaaaacata 22525805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 17862568 - 17862518
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaa 66  Q
    ||||||||| ||||||| ||||||||||||| | |||||||| ||||||||    
T  17862568 tgatgtcttattttgccaatttacatgatttttcactaaaaaaactcaaaa 17862518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 32141616 - 32141584
Alignment:
Q  17 gatgtcttgttttgccgatttacatgatttctt 49  Q
    ||||||||||||||||||||| |||||||||||    
T  32141616 gatgtcttgttttgccgatttgcatgatttctt 32141584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 3e-60; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 6 - 230
Target Start/End: Complemental strand, 10576621 - 10576397
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||| ||||| ||||||||| |||| ||||| ||||||| | |||||| |||||||    
T  10576621 atccttcacatgatgtcttgtttttccgatttacataatttctcactagaaagaatcaaaacacctatgaagttgtataatttagaataaaagtgaatta 10576522  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat-atcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    |||||||||||||||||||||||||||| |||| ||||||||| ||||| | |||||||| |||| || ||||||||| ||||| ||| |||||||||||    
T  10576521 caatgactcgaatgaaaacaatacaaaatgttcttcaaaccatggacaacttctctaaatgatctctt-attttccttcaaatggaaagaaaataactaa 10576423  T
Q  205 aaacatagcttaaagtatcatatgat 230  Q
    ||||||||  |||| |||||||||||    
T  10576422 aaacatagtctaaaatatcatatgat 10576397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 41 - 232
Target Start/End: Complemental strand, 22119779 - 22119588
Alignment:
Q  41 tgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcct 140  Q
    |||||||| ||||||||||||||||| || |||| ||||| || |||| || ||||| | ||||||||||||||||| ||||||| |||||   ||||||    
T  22119779 tgatttctcactaaaaagactcaaaatacctatgtagttgcatgattttgggtaaaagtaaattacaatgactcgaacgaaaacattacaatttgttcct 22119680  T
Q  141 caaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgatgt 232  Q
    |||||||||||||| |||| |||||| ||| |||||| |||| ||||||||| |||||||||||||||||||| |||| |||||||||||||    
T  22119679 caaaccattgacaactcctataaataacttctaatttgccttcaaatgcaaagaaaataactaaaaacatagcataaaatatcatatgatgt 22119588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 228
Target Start/End: Complemental strand, 9288378 - 9288156
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||| || |  || ||||  ||||||| |||||||    
T  9288378 atccttcacttgatgtcttgttttgccgatttacatgatttctcactaaaaagactaaaaaaacatatggaggtacatgatttatgataaaaatgaatta 9288279  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
     |||||||| ||||||||||||||||   ||||||||||||||||| || |||||| |||  |   ||||||||||||| ||||||| ||||  ||||||    
T  9288278 taatgactcaaatgaaaacaatacaatttgttcctcaaaccattgaaaactcctcttaattacaactaattttcctttatatgcaaagaaaactactaaa 9288179  T
Q  206 aacatagcttaaagtatcatatg 228  Q
    |||||| | |||| |||||||||    
T  9288178 aacatatcctaaaatatcatatg 9288156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 26159924 - 26159776
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||||||||||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||||| ||||| ||||||| ||| |||||| |||||    
T  26159924 atccttcacatgatgtcttgttttgctgatctacatgatttttcactaaaaagactcaaaacacatatgaagttggataatttaggacaaaactaaatta 26159825  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    ||| |||||||||||||||||||||||| ||| || |||| ||||||||    
T  26159824 caacgactcgaatgaaaacaatacaaaatgtttcttaaactattgacaa 26159776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 21167895 - 21167671
Alignment:
Q  9 cttcacatgatgtcttgttttg-ccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattaca 107  Q
    |||||| | ||||||||||||  |||||||||||||||||| ||||||||| |||||||||| |||| ||||  ||| ||| |||||||| | |||||||    
T  21167895 cttcacgttatgtcttgttttttccgatttacatgatttctcactaaaaagtctcaaaacacctatgaagttacatattttaggataaaagtaaattaca 21167796  T
Q  108 atgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaa 207  Q
    |  ||||||||||||||||||||||| |||||| ||| ||| ||||| ||||||||||  | | | ||||||||| |||||||||  |||||||||||||    
T  21167795 acaactcgaatgaaaacaatacaaaatgttccttaaaacatggacaactcctctaaatgacgtcttattttccttcaaatgcaaaacaaataactaaaaa 21167696  T
Q  208 catagcttaaagtatcatatgatgt 232  Q
    |||  | |||| |||||||||||||    
T  21167695 catgacataaactatcatatgatgt 21167671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 6 - 208
Target Start/End: Complemental strand, 21077401 - 21077199
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||| ||| || |||||||||||||| ||||||||||||| | |||||||||||  ||||||| |||| | ||  || ||||| ||||||| |||| ||    
T  21077401 atcctccacttggtgtcttgttttgccaatttacatgatttttcactaaaaagaccaaaaacacctatggaatttgatgatttgtgataaaattgaacta 21077302  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||| ||||||||| |||| ||||||||| ||| |||||||||||||||| ||||||||||  ||| |||||| |||| ||||||||| ||||||||||||    
T  21077301 caacgactcgaataaaaataatacaaaaggtttctcaaaccattgacaactcctctaaatgacttctaatttgccttcaaatgcaaagaaaataactaaa 21077202  T
Q  206 aac 208  Q
    |||    
T  21077201 aac 21077199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 209
Target Start/End: Complemental strand, 29437639 - 29437434
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||  |||| ||||| || |||| ||||||||||||||||    
T  29437639 atccttcacgtgatgtcttgtcttgccgatttacatgatttctcattaaaaagactcaaaacagctatgaagttgcatgatttaggataaaactgaatta 29437540  T
Q  106 caatgactcgaatgaaaacaata--caaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataacta 203  Q
    | |  ||||||||||||| || |  |||||| |||||||||| |||||||| || ||||| |   || |||||| |||| |||| |||| ||||||||||    
T  29437539 cgaatactcgaatgaaaaaaaaaatcaaaaaattcctcaaactattgacaactcatctaattgagttctaatttgccttcaaatacaaagaaaataacta 29437440  T
Q  204 aaaaca 209  Q
    ||||||    
T  29437439 aaaaca 29437434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 17339761 - 17339985
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  |||| ||||| |||| ||||| ||| ||| ||| |||||||||  ||||||||| |||| | ||| || |||| |||||||| |||||||    
T  17339761 atccttcatgtgatatcttgctttgtcgatt-acacgatctctcactaaaaagcttcaaaacacctatgaaattgcatgatttaggataaaattgaatta 17339859  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||| |||| |||||||||  |||||||| ||||||||| |||| || || |||||||||| || | | |||| |||||||||| ||||||||||| ||||    
T  17339860 caaagactagaatgaaaaagatacaaaatgttcctcaatccatggataactcctctaaatgtcctcttatttgcctttaaatgtaaataaaataattaaa 17339959  T
Q  206 aacatagcttaaagtatcatatgatg 231  Q
    |||||||| |||| ||||||||||||    
T  17339960 aacatagcctaaaatatcatatgatg 17339985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 165
Target Start/End: Complemental strand, 23353789 - 23353632
Alignment:
Q  7 tccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattac 106  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||| |  || |  ||||   |||||| ||||||||    
T  23353789 tccttcatgtgatgtcttgttttgccgatttacatgatttctcactaaaaagactcaaaacactcatgaatgtgcacgattt-atataaaattgaattac 23353691  T
Q  107 aatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    || ||||||||||||||||||||||||||||||| |||||||||| || | ||||||||    
T  23353690 aacgactcgaatgaaaacaatacaaaaagttccttaaaccattgataattactctaaat 23353632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 19601963 - 19601780
Alignment:
Q  10 ttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaa 108  Q
    ||||| |||||||||| ||||  |||||||||||||||| |||| ||||  || |||| || |||| ||||| || |||| |||||||| ||||||||||    
T  19601963 ttcacgtgatgtcttgatttgttgatttacatgatttctcactagaaaacgctaaaaatacctatggagttgcatgatttaggataaaagtgaattacaa 19601864  T
Q  109 tgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaa 192  Q
      | | ||||||||| |||| |||||||||||||||||| |||||| |||||||| |  |||||||||| ||||||||||||||    
T  19601863 caatttgaatgaaaaaaatagaaaaagttcctcaaaccaatgacaactcctctaattgacttttaatttgcctttaaatgcaaa 19601780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 46647363 - 46647139
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaaga-ctcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    |||| |||| |||||||||||||||| |||||| |||||||||   |||||| | |||||  ||| |||| ||||| || |||| |||||||| ||||||    
T  46647363 atccctcacgtgatgtcttgttttgctgatttatatgatttctcgataaaaataactcaa--cacttatggagttgcatgatttaggataaaagtgaatt 46647266  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    |||  |||| |||||||||||||||||||  ||| | ||||||||||||| | |||||||| |  | | ||||||||| |||| |||| ||||||| |||    
T  46647265 acaccgactagaatgaaaacaatacaaaatattcttgaaaccattgacaacttctctaaattttctcttattttccttcaaatacaaagaaaataattaa 46647166  T
Q  205 aaacatagcttaaagtatcatatgatg 231  Q
    ||||||||  |||| ||||||||||||    
T  46647165 aaacatagtgtaaaatatcatatgatg 46647139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 34864241 - 34864395
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| |||||||||| |||| ||||||||||||||||| |||| |||| |||||||||||  ||| ||||  ||||||| |||||||| ||||||    
T  34864241 atccttcacgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacactcaaaacac--atggagtttcataatttaggataaaagtgaatt 34864338  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    |||||||  ||| |||||||||||  | | |||||||||||||||||||| ||||||||    
T  34864339 acaatga--cgagtgaaaacaatatgatacgttcctcaaaccattgacaactcctctaa 34864395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 20044333 - 20044139
Alignment:
Q  19 tgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaat 118  Q
    ||||||| ||| | || ||||||||||| | | ||||||||||||||| ||||||| ||||| || |||  |||  ||| ||||||||||||||||||||    
T  20044333 tgtcttgctttactgaattacatgatttttcaataaaaagactcaaaatacatatggagttgcatgattaaggaagaaattgaattacaatgactcgaat 20044234  T
Q  119 gaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagc 213  Q
    |||||||||| |||| ||  ||| ||||||  |||| ||||| |||||   | ||| ||  ||||||||| ||||||||||||||||||||||||    
T  20044233 gaaaacaatataaaatgtctctcgaaccatgaacaactcctccaaataaactctaaattgtctttaaatgtaaataaaataactaaaaacatagc 20044139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 213
Target Start/End: Original strand, 31859847 - 31860034
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||| || |||| ||||||              
T  31859847 atccttcacctggtgtcttgttttgctgatttacatgatttctcactaaaaagactcaaaacacctatgcagttgcatgatttaggataa---------- 31859936  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
              |||||||||| | ||||| ||||||||||| |||||||| | ||||||||| | ||| ||||| ||| ||||||||| ||||||||||||    
T  31859937 ----------aatgaaaacagtgcaaaatgttcctcaaacaattgacaacttctctaaataaccttttatttttcttcaaatgcaaaaaaaataactaaa 31860026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 18444418 - 18444277
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| |||||||||||||||| ||||||||||| |||  ||  |||||||| |||| || |||| |||||  | |||| ||||||||||||||||    
T  18444418 atccttcacgtgatgtcttgttttgcagatttacatgacttcccacggaaaagacttaaaatacctatggagttgcgtgatttaggataaaactgaatta 18444319  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaacca 147  Q
    ||  | |||||||||||||| |||||| ||||||||||||||    
T  18444318 cagcggctcgaatgaaaacattacaaagagttcctcaaacca 18444277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 25315188 - 25315334
Alignment:
Q  17 gatgtcttgttttgccgatttacatgatttcttactaaaaag-actcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    ||||||||| |||| |||||||||||||| || |||| |||  ||||||||| |||||| ||||| || || | |||||||||| |||||||| |||||     
T  25315188 gatgtcttgatttgtcgatttacatgattcctcactacaaattactcaaaacccatatggagttgcatgatctaggataaaacttaattacaacgactca 25315287  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctcta 162  Q
    | |||||||||||||| | |||||||||| ||||||||| |||||||    
T  25315288 agtgaaaacaatacaatatgttcctcaaagcattgacaactcctcta 25315334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 164
Target Start/End: Original strand, 13275712 - 13275849
Alignment:
Q  27 tttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaa 126  Q
    |||||||| |||||||||||   | |||||||||||||||||| ||   ||||| || ||||||||| ||| ||||||| || |||||||||||||||||    
T  13275712 tttgccgaattacatgatttagcaataaaaagactcaaaacacctacagagttgtatgatttgggatgaaagtgaattataacgactcgaatgaaaacaa 13275811  T
Q  127 tacaaaaagttcctcaaaccattgacaaatcctctaaa 164  Q
    ||||| | ||| ||||||||||  ||||||||||||||    
T  13275812 tacaacatgtttctcaaaccatgtacaaatcctctaaa 13275849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 33519187 - 33519001
Alignment:
Q  17 gatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcga 116  Q
    ||||| ||| |||||||||| ||||||||||| |||||||||||||||||||| || | ||||| || ||||  ||||||||||||||          ||    
T  33519187 gatgttttgatttgccgattcacatgatttctcactaaaaagactcaaaacacctacgaagttgcatgatttaagataaaactgaatt----------ga 33519098  T
Q  117 atgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagc 213  Q
    |||||||| ||||||||  |||||||||| || ||||| ||| ||||||| | | | |||| |||| ||||||||| ||||||| ||||||||||||    
T  33519097 atgaaaacgatacaaaatattcctcaaactatcgacaactcccctaaataacctcttatttgccttcaaatgcaaagaaaataattaaaaacatagc 33519001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 9782929 - 9783087
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||| |||||||||||||| ||||  ||||||||||||| || |||| |||| |||| ||| || |||| ||||| || || |   |||||||||||||    
T  9782929 atcctccacatgatgtcttgatttgttgatttacatgattcctcactacaaaacactctaaaaacctatggagttgcatgatctaaaataaaactgaatt 9783028  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    ||||||| | || |||||||||||||| | ||||||||||| |||||||| ||||||||    
T  9783029 acaatgaattgagtgaaaacaatacaatatgttcctcaaactattgacaactcctctaa 9783087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 5906746 - 5906874
Alignment:
Q  85 atttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttccttta 184  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||| || | |||||||||||||||||||| |||||||| | || | |  |||  ||| |    
T  5906746 atttgggataaaagtgaattgtaatgactcgagtgaaaacaatataatatgttcctcaaaccattgacaattcctctaactctcatcttgtttgtcttca 5906845  T
Q  185 aatgcaaataaaataactaaaaacatagc 213  Q
    |||||||||||||  ||||||||||||||    
T  5906846 aatgcaaataaaagtactaaaaacatagc 5906874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 231
Target Start/End: Complemental strand, 24925888 - 24925748
Alignment:
Q  91 gataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgca 190  Q
    ||||||| |||||||||  ||||| |||||||||||||||||| ||| ||||||| |||||||| || | |||||  ||| | ||||  ||| |||| ||    
T  24925888 gataaaagtgaattacagcgactcaaatgaaaacaatacaaaatgttactcaaacgattgacaactcttttaaatgacttcttatttatcttcaaataca 24925789  T
Q  191 aataaaataactaaaaacatagcttaaagtatcatatgatg 231  Q
    ||||||||||||||||||||||| |||| ||| ||| ||||    
T  24925788 aataaaataactaaaaacatagcataaaatattataggatg 24925748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 13064594 - 13064531
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacac 69  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  13064594 atccttcacgtgatgtcttgatttgccaatttacatgatttcttactaaaatgactcaaaacac 13064531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 144
Target Start/End: Complemental strand, 15192372 - 15192233
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| |||||||||| |||| ||||||||||||||||| |||| |||| ||||||||||| |||| || || |  || | |||||||| ||||||    
T  15192372 atccttcacgtgatgtcttggtttgtcgatttacatgatttctcactacaaaacactcaaaacacctatggagctgcacgatctaggataaaagtgaatt 15192273  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaa 144  Q
    ||||  ||| || |||||||||||||| | ||||| ||||    
T  15192272 acaacaacttgagtgaaaacaatacaatatgttccacaaa 15192233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 27302853 - 27302798
Alignment:
Q  99 tgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  27302853 tgaattacaatgactcgagtgaaaacaatacaaaatgttcctcaaaccattgacaa 27302798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 143
Target Start/End: Complemental strand, 17187337 - 17187207
Alignment:
Q  10 ttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaat 109  Q
    ||||| |||||| || ||||| ||||||||||||||| | |||||||||||||  ||||| |||| ||||| || |||| |||||||| || |||  | |    
T  17187337 ttcacttgatgtgttattttgtcgatttacatgatttatcactaaaaagactc--aacacctatgaagttgcatgatttaggataaaagtg-attttagt 17187241  T
Q  110 gactcgaatgaaaacaatacaaaaagttcctcaa 143  Q
    ||||| ||||||||||||| ||||||||||||||    
T  17187240 gactcaaatgaaaacaataaaaaaagttcctcaa 17187207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 1676326 - 1676398
Alignment:
Q  90 ggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctcta 162  Q
    |||||||| ||||||||||  ||||||||||||||| ||||| | |||||||||||||||||||| |||||||    
T  1676326 ggataaaattgaattacaaaaactcgaatgaaaacattacaatatgttcctcaaaccattgacaactcctcta 1676398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 1682854 - 1682926
Alignment:
Q  90 ggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctcta 162  Q
    |||||||| ||||||||||  ||||||||||||||| ||||| | |||||||||||||||||||| |||||||    
T  1682854 ggataaaattgaattacaaaaactcgaatgaaaacattacaatatgttcctcaaaccattgacaactcctcta 1682926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 16442218 - 16442343
Alignment:
Q  19 tgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaat 118  Q
    |||| |||||| |||| ||||||||||| | | |||||||| ||||||||| |||| ||||| || |||||| |  || |  ||||||||| ||| ||||    
T  16442218 tgtcatgttttaccgaattacatgatttatcattaaaaagagtcaaaacacttatggagttgcatgatttggaaataatccaaattacaataacttgaat 16442317  T
Q  119 gaaaacaatacaaaaagttcctcaaa 144  Q
    ||||| ||||||||| ||||||||||    
T  16442318 gaaaataatacaaaatgttcctcaaa 16442343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 18898151 - 18898003
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  |||||||||| |||| ||||||||||||||||| ||||        |||||||| |||| ||||| ||| | |  || ||||  ||||||    
T  18898151 atccttcatgtgatgtcttgatttgtcgatttacatgatttctcacta--------caaaacacctatgaagttgcatagtctatgaaaaaagcgaatta 18898060  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctcta 162  Q
    ||| | ||||| |||||||||||||| | |||||| |||||||||||||||| ||||    
T  18898059 caacggctcgagtgaaaacaatacaatatgttccttaaaccattgacaaatcatcta 18898003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 165
Target Start/End: Complemental strand, 4732891 - 4732759
Alignment:
Q  33 gatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaa 132  Q
    ||||||||||||||||   |||||||||| ||||  | | || ||||| ||  ||| |||||||  | |||||||| ||||| ||||||||||||| |||    
T  4732891 gatttacatgatttctcgttaaaaagactaaaaaagcttgtgaagttgtatggtttaggataaatttaaattacaacgactcaaatgaaaacaatataaa 4732792  T
Q  133 aagttcctcaaaccattgacaaatcctctaaat 165  Q
    | |||| |||||  |||||||| ||||||||||    
T  4732791 atgttcatcaaaggattgacaattcctctaaat 4732759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 13206643 - 13206690
Alignment:
Q  27 tttgccgatttacatgatttcttactaaaaagactcaaaacacatatg 74  Q
    |||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  13206643 tttgccgatttacatgatttctcactaaaatgactcaaaacacctatg 13206690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 17026642 - 17026745
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  |||||||||  |||| ||||||||||||||| | |||| |||| ||||||||||| |||| ||||| || || | |||||||| ||||||    
T  17026642 atccttcatgtgatgtcttaatttgtcgatttacatgatttatgactacaaaacactcaaaacacctatggagttgcatgatctaggataaaagtgaatt 17026741  T
Q  105 acaa 108  Q
    ||||    
T  17026742 acaa 17026745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 12111362 - 12111435
Alignment:
Q  90 ggataaaactgaattacaatgactcgaatgaaaacaa-tacaaaaagttcctcaaaccattgacaaatcctcta 162  Q
    |||||||| |||||||||| ||||||  |||||| || ||||| | |||||||||||||||||||| |||||||    
T  12111362 ggataaaagtgaattacaacgactcgtgtgaaaaaaaatacaatatgttcctcaaaccattgacaactcctcta 12111435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 12243698 - 12243736
Alignment:
Q  31 ccgatttacatgatttcttactaaaaagactcaaaacac 69  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  12243698 ccgatttacatgatttctcactaaaatgactcaaaacac 12243736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 7024165 - 7024210
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttac 51  Q
    ||||||||| ||||||||||||||||| |||||| | |||||||||    
T  7024165 atccttcacgtgatgtcttgttttgccaatttacttaatttcttac 7024210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 53001170 - 53001283
Alignment:
Q  52 taaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattga 151  Q
    |||||||| | ||||||| |||| ||||| || ||| || |  ||||| ||||||||||| ||||||||||| |||| ||||  | | |||||||||  |    
T  53001170 taaaaagattaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataatataaaatatccttcaaaccatgaa 53001269  T
Q  152 caaatcctctaaat 165  Q
    ||| ||||||||||    
T  53001270 caactcctctaaat 53001283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 105
Target Start/End: Complemental strand, 5676368 - 5676268
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaag-actcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  |||||||||| |||  | ||||||||||||  | ||||||||  ||||||||||| |||| ||||| | ||||| |||||||| ||||||    
T  5676368 atccttcatgtgatgtcttgatttatcaatttacatgattcatcactaaaaaatactcaaaacacctatggagttgcacaatttaggataaaaatgaatt 5676269  T
Q  105 a 105  Q
    |    
T  5676268 a 5676268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 17434303 - 17434335
Alignment:
Q  17 gatgtcttgttttgccgatttacatgatttctt 49  Q
    ||||||||||||||||||||| |||||||||||    
T  17434303 gatgtcttgttttgccgattttcatgatttctt 17434335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 30625004 - 30624921
Alignment:
Q  36 ttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatga 120  Q
    ||||||||||| | | |||||||||||||||||| |||| | ||| || ||| ||||  ||||||||||| ||||||||| ||||    
T  30625004 ttacatgatttttcaataaaaagactcaaaacacctatgaaattgcatgattaggga-gaaactgaattataatgactcgtatga 30624921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 11644 - 11870
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||| || ||||||||||||||| |||||||||||||||| |||  ||||||||||||||||  ||| ||||| || |||| ||| ||||||||||||    
T  11644 atccttaacttgatgtcttgttttgtcgatttacatgatttcgtacggaaaagactcaaaacacccatgtagttgcatgatttaggacaaaactgaatta 11743  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||| || || ||||||||| ||||||||||||| ||||| ||||||||| ||||||||||  ||| || ||| |||| ||||||||||||||||||||||    
T  11744 caacgattcaaatgaaaactatacaaaaagttcatcaaatcattgacaactcctctaaatgacttctattttgccttcaaatgcaaataaaataactaaa 11843  T
Q  206 aacatagcttaaagtatcatatgatgt 232  Q
    |||||||| |||| |||||||||||||    
T  11844 aacatagcctaaaatatcatatgatgt 11870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 11475015 - 11474788
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaa-gactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| || |||| |||||||| ||||||    
T  11475015 atccttcatgtgatgtcttgttttgccgatttacatgatttctcactaaaaaagactcaaaacacatatgaagttgcatgatttaggataaaattgaatt 11474916  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    |||| || ||||||||||| |||||||||||||||||||||||||||| | |||| ||||   |||  ||||||||||||| |||||| ||||||||||     
T  11474915 acaacgagtcgaatgaaaataatacaaaaagttcctcaaaccattgactagtcctttaaacgacttccaattttcctttaagtgcaaagaaaataactat 11474816  T
Q  205 aaacatagcttaaagtatcatatgatgt 232  Q
    |||| |||  | || |||||||||||||    
T  11474815 aaacgtagtctgaaatatcatatgatgt 11474788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 21829089 - 21829303
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    ||||||||||||| | ||||||||| ||||||| ||||| ||||| |||||| |||||| ||||| || |||| ||||||||||||||||||| |||||     
T  21829089 tgatgtcttgtttcgacgatttacaagatttctcactaacaagacccaaaactcatatgaagttgtatgatttaggataaaactgaattacaacgactca 21829188  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagctt 215  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||||||||  | | | ||||||||| ||||||||||||||||| |||||| ||||       
T  21829189 aatgaaaataatacaaaatgttcctcaaaccattgacaactcctctaaatgacctcttattttccttcaaatgcaaataaaataaataaaaatatagtca 21829288  T
Q  216 aaagtatcatatgat 230  Q
    ||| |||||||||||    
T  21829289 aaaatatcatatgat 21829303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 26297915 - 26297760
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||||| ||||||||  |||||||| ||||| || |||| |||||||| |||||||    
T  26297915 atccttcacttgatgtcttgttttgccgatttacatgatttatcactaaatagactcaa--cacatatgaagttgcatgatttaggataaaattgaatta 26297818  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    ||| ||||||||||||||||||| |||||||| ||||||||||| |||| ||||||||    
T  26297817 caacgactcgaatgaaaacaatataaaaagtttctcaaaccattaacaactcctctaa 26297760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 214
Target Start/End: Original strand, 26387791 - 26387999
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| ||||||||||||| || |||||||||||||||| | |||||||||||||||||  |||| ||||| || |||| |||||||||| |||||    
T  26387791 atccttcacttgatgtcttgtttagctgatttacatgatttctcattaaaaagactcaaaacatctatggagttgcatgatttaggataaaacttaatta 26387890  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    | | ||| | |||||||| ||||||||| ||| |||||||||||||||| | |||||| |  ||| |||||| |||| |||||||||  |||||||| ||    
T  26387891 ctacgacacaaatgaaaagaatacaaaacgtttctcaaaccattgacaactactctaatttacttctaatttgccttcaaatgcaaactaaataactgaa 26387990  T
Q  206 aacatagct 214  Q
    |||||||||    
T  26387991 aacatagct 26387999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 8402498 - 8402722
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| |||||||||| | |  ||||||||| |||| ||  |||||| |||||||||||| |||| ||||| || ||||  ||||||| |||||||    
T  8402498 atccttcacttgatgtcttgatctatcgatttacacgattcctcgctaaaa-gactcaaaacacctatggagttgcatgatttaagataaaaatgaatta 8402596  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||| |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||  | | | |||| |||| |||||||||  |||||  ||||    
T  8402597 caacgactcgaatgaaaacaatacaaattgttcctcaaaccattgacaactcctctaaattacatcttatttgccttcaaatgcaaagtaaatacataaa 8402696  T
Q  206 aacatagcttaaagtatcatatgatg 231  Q
    |||||||  |||| ||||||||||||    
T  8402697 aacatagtctaaaatatcatatgatg 8402722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 18474326 - 18474182
Alignment:
Q  18 atgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaa 117  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||||||||| |||| ||||| || |||| |||||| | ||||||||||||| |||||    
T  18474326 atgtcttgtgttcccgatttacatgatttctcactgaaaagactcaaaacacctatggagttgcatgatttaggataacagtgaattacaatgaatcgaa 18474227  T
Q  118 tgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    || |||||||||||  |||||||||||| ||||| |||||||||||    
T  18474226 tg-aaacaatacaatcagttcctcaaacgattgataaatcctctaa 18474182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 27374399 - 27374546
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||||||||||| |||||||||||| ||| ||||||||||  ||||||| || |||||  || || | ||||| || |||| ||||||||||| ||||    
T  27374399 atccttcacatgatctcttgttttgccaattcacatgatttcgcactaaaa-gattcaaataacctacgaagttgcatgatttaggataaaactggatta 27374497  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
     |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  27374498 taatgactcgaatgaaaacaatacaaaaacttccttaaaccattgacaa 27374546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 28422621 - 28422435
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| |||||| ||| |||| |||| |||||||||||| |||| |||| | |||||||||  ||  ||||| || |||| | |||||| ||||||    
T  28422621 atccttcacgtgatgtattgatttgtcgatctacatgatttctcactacaaaacattcaaaacaccaattgagttgcatgatttag-ataaaagtgaatt 28422523  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaa 192  Q
    ||||||| |||||||||||||||||||||| |||||||||| |  ||||| |||||||| |  ||| ||||||||||| |||||||||    
T  28422522 acaatgattcgaatgaaaacaatacaaaaaattcctcaaacaaacgacaactcctctaattgacttctaattttccttcaaatgcaaa 28422435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 23908228 - 23908375
Alignment:
Q  17 gatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcga 116  Q
    ||||||||| ||||||| ||||||||||||||  ||| ||||||||||| ||| |||| | ||| || |||| ||||||||  ||||||||| || ||||    
T  23908228 gatgtcttgctttgccgctttacatgatttctccctagaaagactcaaagcacctatgaaattgcattattttggataaaagggaattacaacgaatcga 23908327  T
Q  117 atgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaa 164  Q
    ||||||||||||||||| ||||||||| |||  ||||| | |||||||    
T  23908328 atgaaaacaatacaaaatgttcctcaacccagggacaacttctctaaa 23908375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 123
Target Start/End: Original strand, 26797195 - 26797311
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||  |||||||||||| |||||| |||| ||||| || |||| ||||||||| ||||||    
T  26797195 atccttcacttgatgtcttgttttgtcgatttacatgatatctctctaaaaagactc-aaacacctatgaagttgcatgatttaggataaaacagaatta 26797293  T
Q  106 caatgactcgaatgaaaa 123  Q
     || ||||||||||||||    
T  26797294 taacgactcgaatgaaaa 26797311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 30493228 - 30493349
Alignment:
Q  24 tgttttgccgatttacatgattt-cttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaa 122  Q
    ||||||||  ||||||||||||| || ||||||||||||||||||||  ||| | ||| || |||| |||||||||| || ||||| |||||||||||||    
T  30493228 tgttttgcttatttacatgattttctcactaaaaagactcaaaacacccatggatttgcatgatttaggataaaactaaactacaacgactcgaatgaaa 30493327  T
Q  123 acaatacaaaaagttcctcaaa 144  Q
    ||||||||||||||| ||||||    
T  30493328 acaatacaaaaagtttctcaaa 30493349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 210
Target Start/End: Complemental strand, 21813642 - 21813450
Alignment:
Q  19 tgtcttgttttgccgatttacatgatttcttactaaaaa-gactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaa 117  Q
    ||||||||||||| || ||||||| ||| | | |||||| ||||||||| || |||| ||||| || | | ||||  ||| ||||||||||| ||| |||    
T  21813642 tgtcttgttttgctgaattacatggtttatcaataaaaaagactcaaaatacctatgtagttgcatgactagggaagaaattgaattacaataacttgaa 21813543  T
Q  118 tgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacat 210  Q
      ||||||||| |||| || |||||||||||| |||| ||||||| |   ||||||| ||| ||| |||||||||||||||||||||||||||    
T  21813542 caaaaacaatagaaaatgtccctcaaaccattaacaactcctctacacgacttttaaattttcttaaaatgcaaataaaataactaaaaacat 21813450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 13911407 - 13911285
Alignment:
Q  33 gatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaa 131  Q
    |||||||||||||||| |||| |||| ||| |||||||||||| ||||| || || | |||||||| ||||||||||||| || | |||||||||||| |    
T  13911407 gatttacatgatttctcactacaaaacactaaaaacacatatgaagttgcatgatctaggataaaagtgaattacaatgattcaagtgaaaacaatacca 13911308  T
Q  132 aaagttcctcaaaccattgacaa 154  Q
     | ||||||||||||||||||||    
T  13911307 tatgttcctcaaaccattgacaa 13911285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 25883272 - 25883123
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    |||||| ||| ||||||||| ||||  ||| ||||||||| || |||| |||| ||||||||||| |||| ||||| ||||| | |||||||||||||||    
T  25883272 atccttaacaagatgtcttgatttgatgatgtacatgattcctcactataaaacactcaaaacacctatgtagttgcataatctaggataaaactgaatt 25883173  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    |||| || |||| ||||||||||| || | ||||||||||  ||||||||    
T  25883172 acaacgattcgagtgaaaacaatataatatgttcctcaaaaaattgacaa 25883123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 33577902 - 33577754
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  |||||||||  |||||||||||||||| ||| |   |||||||||||||| |||  |||  |||| || |||| ||||| || |||||||    
T  33577902 atccttcatgtgatgtcttactttgccgatttacatgttttttctttaaaaagactcaaaccaccaatgaggttgcatgatttaggatataaatgaatta 33577803  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    |||||| || ||| |||||||||||||| |||| |||||||||||||||    
T  33577802 caatgaatcaaataaaaacaatacaaaacgttcttcaaaccattgacaa 33577754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 2729563 - 2729718
Alignment:
Q  5 tatccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaat 103  Q
    ||||||| || |||||||||  |||  ||||||||| ||||| | |||| |||| |||||||||||||||| ||||| ||  ||| |||||||| |||||    
T  2729563 tatccttgacgtgatgtcttaatttttcgatttacaagatttatcactacaaaacactcaaaacacatatgaagttgcatggtttaggataaaaatgaat 2729662  T
Q  104 tacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcct 159  Q
    ||||| ||||||| ||||||||||| || | ||||||  |||||||||||| ||||    
T  2729663 tacaaggactcgagtgaaaacaatataatatgttccttgaaccattgacaactcct 2729718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 19219157 - 19219383
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  |||||||||| ||||  ||||||||||||| || |||| |||| ||||||||||  ||||  |||| || |||| |||||||| ||||||    
T  19219157 atccttcatgtgatgtcttggtttgaagatttacatgattcctcactacaaaacactcaaaacatttatggtgttgcatgattttggataaaagtgaatt 19219256  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    |||| ||||| | |||||  |||| || | | |||||||||||||||||| |||  ||| | || | | ||||  ||| ||| ||||| ||||  |||||    
T  19219257 acaacgactctagtgaaagtaataaaatatgctcctcaaaccattgacaactccaataactctcatcttatttatcttcaaaagcaaagaaaaatactaa 19219356  T
Q  205 aaacatagcttaaagtatcatatgatg 231  Q
    ||||| |||| ||||||||||||||||    
T  19219357 aaacacagctaaaagtatcatatgatg 19219383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 211
Target Start/End: Complemental strand, 21018046 - 21017840
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| | |||||||| ||||  || ||||||||||||| | || |||| ||||||||||||| |  ||||| || || | |||||||||||||||    
T  21018046 atccttcacgtaatgtcttgatttgttgaattacatgatttctcaatacaaaacactcaaaacacatttagagttgcatgatctaggataaaactgaatt 21017947  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    |||| ||||||  |||||| |||| || | ||||||||||  |||| ||| |||||||| | || | | ||||| ||| ||||||||| ||||  |||||    
T  21017946 acaacgactcggttgaaaataatataatatgttcctcaaattattgccaactcctctaactctcatcttatttttcttcaaatgcaaagaaaaatactaa 21017847  T
Q  205 aaacata 211  Q
    |||||||    
T  21017846 aaacata 21017840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 33914513 - 33914715
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| |||||||||| || | ||||||||||||||||| |||| |||| |||||||||| | |    |||| || |||||||||||   ||||||    
T  33914513 atccttcacgtgatgtcttgattcgtcgatttacatgatttctcactacaaaacactcaaaacataga----gttgcatgatttgggataacg-tgaatt 33914607  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    |||| ||||||| | |||||||||||| | |||||||||||| ||||||| |||| ||| | || | | ||||  ||| ||||||||| ||||  |||||    
T  33914608 acaacgactcgagtaaaaacaatacaatatgttcctcaaaccgttgacaactcctataactctcatcttatttgtcttgaaatgcaaagaaaagtactaa 33914707  T
Q  205 aaacatag 212  Q
    ||||||||    
T  33914708 aaacatag 33914715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 27415327 - 27415194
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactc 114  Q
    |||||||||| || | | |||||||||||||||||||| |||| ||||||||||| |||| ||||| || ||||  ||||||| ||||||||   |||||    
T  27415327 tgatgtcttgattggtctatttacatgatttcttactacaaaacactcaaaacacctatgaagttgcatgatttacgataaaagtgaattac---gactc 27415231  T
Q  115 gaatgaaaacaatacaaaaagttcctcaaaccattga 151  Q
    || |||||||||||||| | |||||| ||||| ||||    
T  27415230 gagtgaaaacaatacaatatgttccttaaaccgttga 27415194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 12573459 - 12573301
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| | |||||||  ||||  ||||||||||||| || |||| |||| ||| |||| || || | || || || || | |||||||| ||||||    
T  12573459 atccttcacgtaatgtcttcatttgttgatttacatgattcctcactacaaaacactaaaaaaacctacggagctgcatgatctaggataaaaatgaatt 12573360  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    |||| | ||||| |||||||||||||||   |||||||||||||||||||||| |||||    
T  12573359 acaacgtctcgagtgaaaacaatacaaagcattcctcaaaccattgacaaatcatctaa 12573301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 13549923 - 13549765
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| | |||||||  ||||  ||||||||||||| || |||| |||| ||| |||| || || | || || || || | |||||||| ||||||    
T  13549923 atccttcacgtaatgtcttcatttgttgatttacatgattcctcactacaaaacactaaaaaaacctacggagctgcatgatctaggataaaaatgaatt 13549824  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    |||| | ||||| |||||||||||||||   |||||||||||||||||||||| |||||    
T  13549823 acaacgtctcgagtgaaaacaatacaaagcattcctcaaaccattgacaaatcatctaa 13549765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 19546014 - 19546075
Alignment:
Q  90 ggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattga 151  Q
    |||||| | |||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  19546014 ggataatagtgaattacaatgactcaaataaaaacaatacaataagttcctcaaaccattga 19546075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 218
Target Start/End: Original strand, 27375090 - 27375205
Alignment:
Q  103 ttacaatgactcgaatgaaaaca-atacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataac 201  Q
    |||||||||||||||| |||| | ||| ||  |||| ||||||||||||||||||||||||| |  | | |||||| || ||||||||||| || |||||    
T  27375090 ttacaatgactcgaataaaaaaagatagaaccagtt-ctcaaaccattgacaaatcctctaattgacatctaatttaccgttaaatgcaaagaacataac 27375188  T
Q  202 taaaaacatagcttaaa 218  Q
    |||||||||| ||||||    
T  27375189 taaaaacatatcttaaa 27375205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 19285257 - 19285048
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    |||| ||||||||| | |||||||| ||| ||| || ||| |||||| |||||| || | |||||    |||| ||| |||| |||||||||| ||||||    
T  19285257 tgatatcttgtttttctgatttacacgatatctcacgaaagagactcgaaacacctaaggagttgctggatttaggacaaaattgaattacaacgactcg 19285158  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagctt 215  Q
    |||||||| ||||| |||| || |||| || |||||||| ||||||||||  ||| |||||| || | ||||||| |  || ||||||||| ||| || |    
T  19285157 aatgaaaataatac-aaaattttctcatactattgacaactcctctaaatgacttctaatttaccctcaaatgcataataagtaactaaaagcatggc-t 19285060  T
Q  216 aaagtatcatat 227  Q
    ||| ||||||||    
T  19285059 aaaatatcatat 19285048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 23007065 - 23007169
Alignment:
Q  59 actcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcc 158  Q
    ||||||||||  |||| ||||| || |||| |||||||| ||| ||| ||||||||||  ||||||||||||| |  ||||||||| ||||||||| ||     
T  23007065 actcaaaacatctatggagttgtatgatttaggataaaagtgatttataatgactcgagggaaaacaatacaatatattcctcaaatcattgacaactca 23007164  T
Q  159 tctaa 163  Q
    |||||    
T  23007165 tctaa 23007169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 1475225 - 1475384
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaa-aaagactcaaa-acacatatgcagttgaataatttgggataaaactgaat 103  Q
    |||||||||||||||||||| ||||  ||||||||| |||  | ||||  ||| ||||||| | ||  ||| ||||| || || | ||||| || |||||    
T  1475225 atccttcacatgatgtcttgatttgatgatttacattattcttcactacgaaacactcaaatatacccatggagttgcatgatctaggatataattgaat 1475324  T
Q  104 tacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    ||||| ||||||| |||||| ||||||| |  |||||||||||||||| || ||||||||    
T  1475325 tacaacgactcgagtgaaaataatacaatatattcctcaaaccattgaaaactcctctaa 1475384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 31279082 - 31279197
Alignment:
Q  18 atgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaa 117  Q
    |||||||| |||| ||| |||||||||||||| |||||| || |||||||| ||||| ||||      |||||||| |||  |||||| |  ||||||||    
T  31279082 atgtcttgatttgtcgaattacatgatttctttctaaaatgattcaaaacatatatggagttaccggttttgggatgaaatagaattaaatggactcgaa 31279181  T
Q  118 tgaaaacaatacaaaa 133  Q
    ||||||||||||||||    
T  31279182 tgaaaacaatacaaaa 31279197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 19263924 - 19264002
Alignment:
Q  85 atttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    |||| |||||||| |||||||||| ||||| | ||| ||||||| || | | |||||||||||||||||| ||||||||    
T  19263924 atttaggataaaagtgaattacaacgactctagtgacaacaatataatatgatcctcaaaccattgacaactcctctaa 19264002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 10341907 - 10341807
Alignment:
Q  62 caaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctct 161  Q
    |||||||| |||| ||||| || |||| | |||||| |||||||||| ||||  | ||||||||||||||   ||||||| |||||||||||| ||||||    
T  10341907 caaaacacctatggagttgcatgattttgaataaaagtgaattacaacgactttagtgaaaacaatacaatttgttcctc-aaccattgacaactcctct 10341809  T
Q  162 aa 163  Q
    ||    
T  10341808 aa 10341807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 26775163 - 26775015
Alignment:
Q  65 aacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaa 164  Q
    |||||||||| ||||| || ||| | ||  |||||| |||| |||||||||||||||||||||||||| | | |||||||||||  |||| ||| |||||    
T  26775163 aacacatatgaagttgcatgattagagaagaaactggattataatgactcgaatgaaaacaatacaaata-tccctcaaaccatgaacaactccgctaaa 26775065  T
Q  165 t-atcttttaattttcctttaa-atgcaaataaaataactaaaaacatag 212  Q
    | | || | ||| ||  ||||| |||  ||||||||||||||||||||||    
T  26775064 tgacctataaatattgttttaatatgataataaaataactaaaaacatag 26775015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 31286378 - 31286431
Alignment:
Q  27 tttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttg 80  Q
    |||||||| |||||| |||||||||||||| |||||||||||| |||| |||||    
T  31286378 tttgccgaattacataatttcttactaaaatgactcaaaacacgtatggagttg 31286431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 16970630 - 16970566
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacac 69  Q
    |||||||||||||||||||| |||| |||||||||||||| | ||||| |||| |||| ||||||    
T  16970630 atccttcacatgatgtcttgatttgtcgatttacatgattccctactacaaaacactctaaacac 16970566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 231
Target Start/End: Complemental strand, 25188871 - 25188701
Alignment:
Q  60 ctcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcct 159  Q
    ||||||| | ||||| ||||| || ||||  ||||||| ||||||||||||| |||||||| || |||  ||||  |||| |||||||||| ||| ||||    
T  25188871 ctcaaaatatatatggagttgcatgatttatgataaaagtgaattacaatgattcgaatgagaa-aatttaaaacattccacaaaccattgtcaattcct 25188773  T
Q  160 ctaaatatcttttaattttcctttaaatgcaaa-taaaataactaaaaacatagcttaaagtatcatatgatg 231  Q
    ||||||  | | | ||||  ||| |||||||||  ||||||| |||||| ||||| |||| ||||||||||||    
T  25188772 ctaaatgacctcttatttgtcttcaaatgcaaagaaaaataagtaaaaatatagcctaaa-tatcatatgatg 25188701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 25919465 - 25919568
Alignment:
Q  62 caaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaa--gttcctcaaaccattgacaaatcct 159  Q
    |||||||  |||| ||||| || |||| |||||||| |||||||| ||||||| | | ||||||| |||| |   ||||||||||||||||||||||| |    
T  25919465 caaaacatctatggagttgcatgatttaggataaaagtgaattacgatgactcaagtaaaaacaacacaatatatgttcctcaaaccattgacaaatcat 25919564  T
Q  160 ctaa 163  Q
    ||||    
T  25919565 ctaa 25919568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 26418877 - 26418829
Alignment:
Q  17 gatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaa 65  Q
    |||||||| |||| |||||||||||||||||| |||||||||| |||||    
T  26418877 gatgtcttatttttccgatttacatgatttctcactaaaaagattcaaa 26418829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 12409541 - 12409478
Alignment:
Q  91 gataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    ||||||| |||||||||| ||||| | |||||| ||||||| | |||| |||||||||||||||    
T  12409541 gataaaaatgaattacaacgactcaagtgaaaataatacaatatgttcttcaaaccattgacaa 12409478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 18065902 - 18065836
Alignment:
Q  85 atttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    |||| |||||||| ||||||||   ||||||| |||||||||||||| | ||| ||||||||||||||||    
T  18065902 atttaggataaaagtgaattac---gactcgagtgaaaacaatacaatatgtttctcaaaccattgacaa 18065836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 26484827 - 26484776
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaac 67  Q
    |||||||||| |||||||||||||||||||| | || |||| ||||||||||    
T  26484827 tgatgtcttgatttgccgatttacatgatttatcaccaaaatgactcaaaac 26484776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 29291935 - 29291713
Alignment:
Q  9 cttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaa 108  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| || |||  ||||| || |||| ||||||||||| |||||||    
T  29291935 cttcacgtgatatcttgttttgccgatttacatgatttcttactaaaaagactcaaaatacttataaagttgcatgatttaggataaaactgcattacaa 29291836  T
Q  109 tgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaac 208  Q
     ||||| |||||||| |||| ||||| |||||||||||||||| || ||||||| ||  ||| |||||| |||| ||||| ||| |||||||| ||||||    
T  29291835 cgactcaaatgaaaa-aatataaaaaattcctcaaaccattgataactcctctatatgacttctaatttgccttcaaatgaaaagaaaataacaaaaaac 29291737  T
Q  209 atagcttaaagtatcatatgatgt 232  Q
    ||||| |||| |||||||||||||    
T  29291736 atagcctaaaatatcatatgatgt 29291713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 232
Target Start/End: Original strand, 14424758 - 14424985
Alignment:
Q  5 tatccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    |||||||| | || |||||||||||||||||||||||||||||| |||||||| ||  ||||||| |||| ||||| || |||| |||||||||||||||    
T  14424758 tatccttcccttgttgtcttgttttgccgatttacatgatttctcactaaaaaaacctaaaacacctatggagttgcatgatttaggataaaactgaatt 14424857  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||||| | | ||||||||  ||| ||||||||||| |||| | || |||| ||||||    
T  14424858 acaacgactcgaatgaaaaccatataaaaagttcctcaaaccattgactacttctctaaattacttctaattttccttcaaattccaagaaaacaactaa 14424957  T
Q  205 aaacatagcttaaagtatcatatgatgt 232  Q
    |||| ||   |||| |||||||||||||    
T  14424958 aaacttaatctaaaatatcatatgatgt 14424985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 177
Target Start/End: Complemental strand, 5153926 - 5153755
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||  |||||||| ||||  |||||||||||||||    
T  5153926 atccttcactttatgtcttgttttgcctatttacatgatttcttactaaaaagactcaaaacacctatcgagttgaatgatttaagataaaactgaatta 5153827  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattt 177  Q
    |||||||||||||||||| ||||||||   || || ||| ||||||||| ||||||||||| ||| ||||||    
T  5153826 caatgactcgaatgaaaataatacaaattttttctaaaatcattgacaactcctctaaataacttctaattt 5153755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 10867156 - 10866930
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| || | |||||||||||||| ||||||||||||| |||||||||| ||||| ||| | || ||||| || ||||| |||||||||||||||    
T  10867156 atccttcacgtggtatcttgttttgccgacttacatgatttctcactaaaaagattcaaagcacctttggagttgcatgatttgagataaaactgaatta 10867057  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||| ||||| ||||||||||||||||||  ||||||||||||||||||| | ||||||||  | | | |||| ||||  ||| |||| ||||||||||||    
T  10867056 caacgactcaaatgaaaacaatacaaaatattcctcaaaccattgacaactactctaaatgacctcttatttgccttcgaattcaaagaaaataactaaa 10866957  T
Q  206 aacatagcttaaagtatcatatgatgt 232  Q
    | |||| |  ||| |||||||||||||    
T  10866956 atcataccaaaaaatatcatatgatgt 10866930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 11437583 - 11437381
Alignment:
Q  10 ttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaat 109  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| || |  |  ||| ||||||||||| ||     
T  11437583 ttcacttgatgtcttgttttgccgatttacatgatttctcactaaaaagactcaaaatacatatggagttgcatgacctatgatgaaactgaattataac 11437484  T
Q  110 gactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaaca 209  Q
    ||||||||||||||||| ||||||| ||| || ||||||||| || |||||||| |  |||  ||||| ||||||||| |||| ||||||||||||| ||    
T  11437483 gactcgaatgaaaacaacacaaaaatttcttcgaaccattgaaaactcctctaattgacttccaatttgcctttaaatacaaagaaaataactaaaagca 11437384  T
Q  210 tag 212  Q
    |||    
T  11437383 tag 11437381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 30543929 - 30543711
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  |||| ||||||||| |||||||||||||||||| || ||||||||||||||||| |||  | ||| || |||| |||||||| |||||||    
T  30543929 atccttcatgtgatatcttgttttaccgatttacatgatttctcaccaaaaagactcaaaacacctatataattgcatgatttaggataaaagtgaatta 30543830  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    |||  |||| |||||||||||||| |||||||| ||||| |||||| || |||||||| || ||||||||||  ||| ||||||||| ||||  ||||||    
T  30543829 caacaactcaaatgaaaacaatac-aaaagttcatcaaa-cattgagaactcctctaattaacttttaatttgtcttcaaatgcaaaaaaaaatactaaa 30543732  T
Q  206 aacatagcttaaagtatcata 226  Q
    ||||||||| ||| |||||||    
T  30543731 aacatagctaaaaatatcata 30543711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 31436635 - 31436423
Alignment:
Q  18 atgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaa 117  Q
    |||||||||||||  |||||||||||||||| |||||||||| ||||||||| |||| ||||| || |||| |||||||||| ||||||| |||||||||    
T  31436635 atgtcttgttttgttgatttacatgatttctcactaaaaagattcaaaacacctatgtagttgcatgatttaggataaaactaaattacactgactcgaa 31436536  T
Q  118 tgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaa 217  Q
    |||||| |||| |     ||||||||| ||||||||| ||||||||||  | | | |||| |||| ||||||| |||||||||||||||| ||||  |||    
T  31436535 tgaaaaaaatatagtttattcctcaaatcattgacaactcctctaaattacatcttatttgccttcaaatgcagataaaataactaaaaatatagtataa 31436436  T
Q  218 agtatcatatgat 230  Q
    | |||||||||||    
T  31436435 aatatcatatgat 31436423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 27097746 - 27097908
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaa--gactcaaaacacatatgcagttgaataatttgggataaaactgaat 103  Q
    |||| |||| ||||||||||||||||||||||||||||||||| ||||||||  ||||  |||||| |||| ||||| || ||||  |||||||||||||    
T  27097746 atccatcacgtgatgtcttgttttgccgatttacatgatttctcactaaaaaaagactttaaacacctatgaagttgcatgatttatgataaaactgaat 27097845  T
Q  104 tacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaata 166  Q
    ||||| ||||| |||||||||||| ||| | |||||||||||||||||||| |||||||||||    
T  27097846 tacaacgactcaaatgaaaacaatgcaacatgttcctcaaaccattgacaattcctctaaata 27097908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 230
Target Start/End: Original strand, 35135367 - 35135594
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttctt--actaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaat 103  Q
    ||||| ||| ||||||||||||||| |||||||| ||||||||   |  ||||||||||||||||||| || ||||| || |||| |||||||| |||||    
T  35135367 atcctccacgtgatgtcttgttttgtcgatttacctgatttctccaaaaaaaaagactcaaaacacatgtggagttgcatgatttaggataaaaatgaat 35135466  T
Q  104 tacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataac-t 202  Q
    ||||||||||||| | |||||||||||||| || ||| ||||| ||||||| |||| | |||  ||||| |||| |||| |||| |||| ||||||||      
T  35135467 tacaatgactcgagtaaaaacaatacaaaatgtacctaaaacctttgacaactcctttgaatgactttttatttaccttcaaatacaaagaaaataacaa 35135566  T
Q  203 aaaaacatagcttaaagtatcatatgat 230  Q
    ||||||||| | |||| |||||||||||    
T  35135567 aaaaacataacataaaatatcatatgat 35135594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 30851046 - 30851269
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||||||  ||||||||| ||||  |||||||| ||||||| |||| | |||  |||||||| |||  ||||| || |||| ||||||| ||||||||    
T  30851046 atccttcactagatgtcttgctttgatgatttacacgatttctcactagatagatccaaaacacctattgagttgcatgatttaggataaatctgaatta 30851145  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||| || ||||||||||| |||| ||||| |||||||||||||  |||| || | |||||  ||| ||||||||||| ||||  ||| ||||||||||||    
T  30851146 caacgattcgaatgaaaataatataaaaacttcctcaaaccatcaacaactcttataaatgacttctaattttccttcaaatataaagaaaataactaaa 30851245  T
Q  206 aacatagcttaaagtatcatatga 229  Q
    ||||||||  ||| ||||||||||    
T  30851246 aacatagccaaaaatatcatatga 30851269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 28260236 - 28260381
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||| ||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||| |||   || |||| ||||||| || |||||    
T  28260236 atcctccacgtgatgtcttgttttgctgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacctaaatta 28260335  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattga 151  Q
    ||| ||||  |||||||| ||||||||| ||||| | |||||||||    
T  28260336 caacgactaaaatgaaaataatacaaaatgttccaccaaccattga 28260381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 28074681 - 28074554
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  ||||||||||||||||  ||||||||||||||| ||||||||||||| |||||| |||| ||||| || |||| |||||||| ||||||     
T  28074681 atccttcatttgatgtcttgttttgcatatttacatgatttctcactaaaaagactcgaaacacctatggagttgcatgatttaggataaaagtgaattg 28074582  T
Q  106 caatgactcgaatgaaaacaatacaaaaa 134  Q
    ||| ||||| |||||||||||||||||||    
T  28074581 caacgactc-aatgaaaacaatacaaaaa 28074554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 13583466 - 13583613
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| ||  ||||          |||| ||||||||||||||||    
T  13583466 atccttcacttgatgtcttgttttgtcgatttacatgatttctcactaaaaagactcaaaccaactatg----------atttaggataaaactgaatta 13583555  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    ||| ||||||||| ||||||||| |||| |||||||| || ||| |||| ||||||||    
T  13583556 caaagactcgaataaaaacaatagaaaaggttcctcagactattaacaactcctctaa 13583613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 13530052 - 13530277
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||| | ||| ||||||| ||| |||||||||||||||| | | ||||||  || |||| ||||||| ||||| || ||| || |  ||| ||||||     
T  13530052 atcctttatatggtgtcttgctttaccgatttacatgatttttcaataaaaaagcttaaaatacatatggagttgcatgattaggaaataaattgaattt 13530151  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||| |||| ||||||||||||||||||| |||||||||||||| ||||  ||||||||||  | | | ||||  ||| || |||||| || |||||||||    
T  13530152 caaagacttgaatgaaaacaatacaaaatgttcctcaaaccatcgacatctcctctaaatgacctcttatttgtcttcaattgcaaagaatataactaaa 13530251  T
Q  206 aacatagcttaaagtatcatatgatg 231  Q
    |||||||| ||||  |||||||||||    
T  13530252 aacatagcctaaaacatcatatgatg 13530277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 13619591 - 13619816
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||| | ||| ||||||| ||| |||||||||||||||| | | ||||||  || |||| ||||||| ||||| || ||| || |  ||| ||||||     
T  13619591 atcctttatatggtgtcttgctttaccgatttacatgatttttcaataaaaaagcttaaaatacatatggagttgcatgattaggaaataaattgaattt 13619690  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||| |||| ||||||||||||||||||| |||||||||||||| ||||  ||||||||||  | | | ||||  ||| || |||||| || |||||||||    
T  13619691 caaagacttgaatgaaaacaatacaaaatgttcctcaaaccatcgacatctcctctaaatgacctcttatttgtcttcaattgcaaagaatataactaaa 13619790  T
Q  206 aacatagcttaaagtatcatatgatg 231  Q
    |||||||| ||||  |||||||||||    
T  13619791 aacatagcctaaaacatcatatgatg 13619816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 231
Target Start/End: Original strand, 12774799 - 12775015
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaag-actcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactc 114  Q
    ||||| |||||||| ||||||||||| |||||||||||||||| ||| ||||||| ||||   ||| || |||| |||||||||| ||||||||||||||    
T  12774799 tgatgacttgtttttccgatttacattatttcttactaaaaagtactaaaaacacctatggtattgcatgatttaggataaaactaaattacaatgactc 12774898  T
Q  115 gaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagct 214  Q
     ||| |||| |||| |||| || | |||||||||||| ||  || |||| |  | | | ||||  ||| |||||| || |||||||||||||||| |||     
T  12774899 aaataaaaataatataaaatgtacgtcaaaccattgataaccccgctaagtgacctcttatttgtcttcaaatgctaaaaaaataactaaaaacaaagcc 12774998  T
Q  215 taaagtatcatatgatg 231  Q
     ||||||||||||||||    
T  12774999 aaaagtatcatatgatg 12775015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 6888156 - 6888295
Alignment:
Q  23 ttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaa 122  Q
    ||||||||  |||||||||||||||| ||||||| ||||||||||||   || ||||| || |||| ||||| ||||||||||||||||||| |||||||    
T  6888156 ttgttttgttgatttacatgatttctcactaaaatgactcaaaacac--ctggagttgcatgatttaggatagaactgaattacaatgactcaaatgaaa 6888253  T
Q  123 acaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    | ||||||||| ||| ||| |||||||||||| || |||||||    
T  6888254 a-aatacaaaatgtttctctaaccattgacaactcgtctaaat 6888295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 24584698 - 24584857
Alignment:
Q  34 atttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaa 132  Q
    ||||||| ||||||| |||| |||| |||||||| || |||  ||||| || ||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  24584698 atttacaagatttctcactacaaaaaactcaaaatacctatagagttgcatgatttatgataaaaatgaattacaatgactcgaatgaaaacaatacaaa 24584797  T
Q  133 aagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaa 192  Q
    || |||||||||||  |||||| |||||||| |  ||| |||||| |||| |||| ||||    
T  24584798 aaattcctcaaaccgatgacaactcctctaattgacttctaatttgccttcaaatacaaa 24584857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 14977117 - 14977279
Alignment:
Q  70 atatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaa-caatacaaaaagttcctcaaaccattgacaaatcctctaaatatc 168  Q
    ||||| ||||| || |||| |||||||| |||||||||||||||||| |||||| |||||||| | |||||||||||||||||||| |||||||| | ||    
T  14977117 atatggagttgcatgatttaggataaaagtgaattacaatgactcgagtgaaaaacaatacaatatgttcctcaaaccattgacaactcctctaactctc 14977216  T
Q  169 ttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgatg 231  Q
     | | ||||  ||| ||||||||| ||||   |||||||||||| | ||| ||||||||||||    
T  14977217 atcttatttgtcttaaaatgcaaagaaaagtgctaaaaacatagttaaaaatatcatatgatg 14977279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 16052221 - 16052449
Alignment:
Q  4 ttatccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaa 102  Q
    ||||||||||  |||||||||| ||||  |||||| ||||||||| |||| |||| ||||||||||| |||  ||||| || ||||  | ||||  ||||    
T  16052221 ttatccttcatgtgatgtcttgatttgttgatttagatgatttctcactacaaaacactcaaaacacctattgagttgcatgatttaaggtaaatgtgaa 16052320  T
Q  103 ttacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataact 202  Q
    ||| || ||||||| |||||||| || || | |||  ||||||||||||||| |||||||| | || ||| ||||  | | ||||||||||||||  |||    
T  16052321 ttataacgactcgagtgaaaacattaaaatatgttattcaaaccattgacaactcctctaactctcattttatttgtcctcaaatgcaaataaaagtact 16052420  T
Q  203 aaaaacatagcttaaagtatcatatgatg 231  Q
    |||||||||||  ||| ||||||||||||    
T  16052421 aaaaacatagccaaaaatatcatatgatg 16052449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 190
Target Start/End: Original strand, 28292047 - 28292232
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  ||||||||| ||||| |||||||||||||| || |||||||| || |||||||| | || ||||| |||| || ||||||||||||||||    
T  28292047 atccttcatgtgatgtcttattttggcgatttacatgatt-ctcactaaaaaaacacaaaacacttgtgaagttgcataaattaggataaaactgaatta 28292145  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaa--tatcttttaattttcctttaaatgca 190  Q
     ||  |||| |||||||| || | |||| ||||||||||||| |||||| ||||| |||     ||| |||||||||||||||||||    
T  28292146 taacaactcaaatgaaaagaacataaaatgttcctcaaaccactgacaactcctccaaacgacacttctaattttcctttaaatgca 28292232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 212
Target Start/End: Complemental strand, 12956578 - 12956451
Alignment:
Q  85 atttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttccttta 184  Q
    |||| |||||||| |||||||| ||||||||| |||||||||||||| |  ||||||||||||||||||| |||||||| | || | | ||||  ||| |    
T  12956578 atttaggataaaagtgaattacgatgactcgagtgaaaacaatacaatattttcctcaaaccattgacaactcctctaactctcatcttatttatcttca 12956479  T
Q  185 aatgcaaataaaataactaaaaacatag 212  Q
    |||||||| ||||  |||||||||||||    
T  12956478 aatgcaaagaaaagtactaaaaacatag 12956451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 16054463 - 16054305
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||||||||||||||  ||   ||||||||||||| || |||| |||| | ||||||||  |||| ||||  || || | |||||||| ||||||    
T  16054463 atccttcacatgatgtcttgaattaatgatttacatgattcctcactacaaaacaatcaaaacatctatggagttttatgatctaggataaaaatgaatt 16054364  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    ||||  |||||| |||||||||||||||| |||||| ||| ||||||||| ||||||||    
T  16054363 acaacaactcgagtgaaaacaatacaaaatgttccttaaatcattgacaactcctctaa 16054305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 28902258 - 28902056
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaa-aaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| |||||||| | ||||  |||||||||||||||| ||||  ||| ||| ||||||| |||| | |||  |  | | |||||||| ||||||    
T  28902258 atccttcacgtgatgtctcgatttgttgatttacatgatttctcactactaaacactaaaaacacttatggatttgcgtggtataggataaaagtgaatt 28902159  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    |||| |||||||||||||||||||||| | ||| ||||||||||| | || |||||||  |||| | | | || ||| |||||||||||||||  |||||    
T  28902158 acaacgactcgaatgaaaacaatacaatatgtttctcaaaccattaataactcctctatctatcatcttacttgcctataaatgcaaataaaagtactaa 28902059  T
Q  205 aaa 207  Q
    |||    
T  28902058 aaa 28902056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 32239458 - 32239298
Alignment:
Q  4 ttatccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaa 102  Q
    ||||||||||  |||||||| | |||| | ||||||| ||||||| |||| |||| ||||||||||  |||| ||||| || ||||  ||||||| ||||    
T  32239458 ttatccttcatgtgatgtctcgatttgtcaatttacacgatttctcactacaaaacactcaaaacatttatggagttgcatgatttaagataaaagtgaa 32239359  T
Q  103 ttacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    || ||| ||||| | | |||||||||||| | ||| |||||||||||||||| ||||||||    
T  32239358 ttgcaacgactcaagtaaaaacaatacaatatgttactcaaaccattgacaactcctctaa 32239298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 28901371 - 28901443
Alignment:
Q  90 ggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctcta 162  Q
    ||||||||  ||||||||| ||||||| |||||||||||||| | |||||||||||||||||||| |||||||    
T  28901371 ggataaaaacgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgacaactcctcta 28901443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 12357638 - 12357578
Alignment:
Q  9 cttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacac 69  Q
    |||||| |||||||||||||| | ||||||||| |||||| ||||||||||||||||||||    
T  12357638 cttcacttgatgtcttgtttttcagatttacataatttctcactaaaaagactcaaaacac 12357578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 12358766 - 12358706
Alignment:
Q  9 cttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacac 69  Q
    |||||| |||||||||||||| | ||||||||| |||||| ||||||||||||||||||||    
T  12358766 cttcacttgatgtcttgtttttcagatttacataatttctcactaaaaagactcaaaacac 12358706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 29047265 - 29047420
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||||||||||||||  ||   ||||||||||||| || |||| |||| |||||||||| ||||| ||||| || ||     |||||| ||||||    
T  29047265 atccttcacatgatgtcttgaatttatgatttacatgattcctcactacaaaacactcaaaacatatatggagttgcatgatccattataaaattgaatt 29047364  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    ||| |||||||| ||||||||||||||   ||||||   ||||||||||| ||||||||    
T  29047365 acagtgactcgagtgaaaacaatacaatgtgttcct---accattgacaactcctctaa 29047420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 5570136 - 5570279
Alignment:
Q  54 aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgaca 153  Q
    |||| ||||||||||| || | ||||| || || | |||||||| ||||||||||  |||||| |||||||||||||| | ||||||||||  |||||||    
T  5570136 aaaacactcaaaacacctacgaagttgcatgatataggataaaagtgaattacaacaactcgagtgaaaacaatacaatatgttcctcaaagtattgaca 5570235  T
Q  154 aatcctctaaatatcttttaattttcctttaaatgcaaataaaa 197  Q
    | ||||  |||| || | | ||||| ||| ||||||||| ||||    
T  5570236 actccttcaaatctcatcttatttttcttcaaatgcaaaaaaaa 5570279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 26882571 - 26882417
Alignment:
Q  12 cacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatg 110  Q
    |||| ||||||||| ||||  ||||||||||||| || |||| |||| | ||||||||| |||| ||||| || || | ||||||||||  ||||  |||    
T  26882571 cacaagatgtcttgatttgatgatttacatgattcctcactacaaaacaatcaaaacacctatggagttgcatgatctaggataaaactatattatgatg 26882472  T
Q  111 actcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    |||||| |||||||||||||  | | |||| ||||||||| ||| |||| |||||    
T  26882471 actcgagtgaaaacaatacattatgctccttaaaccattggcaactcctttaaat 26882417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 13081938 - 13082041
Alignment:
Q  60 ctcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcct 159  Q
    |||||||||| |||| ||||| || || | ||||| |||||||||||||  |||||| |||||||| |||||   ||| |||||| ||||||||| ||||    
T  13081938 ctcaaaacacctatgaagttgcatgatctaggatacaactgaattacaactactcgagtgaaaacactacaacgtgtttctcaaatcattgacaactcct 13082037  T
Q  160 ctaa 163  Q
    ||||    
T  13082038 ctaa 13082041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 22894502 - 22894625
Alignment:
Q  32 cgatttacatgatttcttactaaa-aagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaataca 130  Q
    ||||||||||||||||| |||| | || ||| |||| || |||| |||||||| || |  ||||||| ||||| ||||||| |||| || ||| ||||||    
T  22894502 cgatttacatgatttctcactatagaacactaaaaatacctatggagttgaatgatctaagataaaagtgaatcacaatgattcgagtgtaaagaataca 22894601  T
Q  131 aaaagttcctcaaaccattgacaa 154  Q
    | | || |||||||||||||||||    
T  22894602 atatgtacctcaaaccattgacaa 22894625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 24120269 - 24120174
Alignment:
Q  136 ttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgatg 231  Q
    ||||||||||| ||||||| |||||||| | || | | ||||  ||| ||||||||| ||||  ||||||||||||||  ||| ||||||||||||    
T  24120269 ttcctcaaaccgttgacaactcctctaactctcatcttatttctcttcaaatgcaaagaaaagtactaaaaacatagcaaaaaatatcatatgatg 24120174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 24696740 - 24696639
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactc 114  Q
    |||||||||| ||||  ||||||||||||||||||||| |||| ||| ||||||| | || | ||| || |||| ||||| || | |||||||| |||||    
T  24696740 tgatgtcttgatttgttgatttacatgatttcttactataaaacactaaaaacacctgtgaaattgtatgatttaggatagaagtaaattacaacgactc 24696641  T
Q  115 ga 116  Q
    ||    
T  24696640 ga 24696639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 41505530 - 41505623
Alignment:
Q  52 taaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaac 145  Q
    ||||||||||||| ||   |||| ||||| || ||| || || ||| ||||||||||  ||||||||||||| |||||||||  ||||||||||    
T  41505530 taaaaagactcaacacgtctatgaagttgcatgattaggtatgaaagtgaattacaacaactcgaatgaaaataatacaaaatattcctcaaac 41505623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 2e-51; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 15298816 - 15299042
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||| ||||||| |||||||||||||||||||||||||| | |||||| |||| |||||||| |||| ||||| || |||| |||||||||| |||||    
T  15298816 atcctttacatgatttcttgttttgccgatttacatgatttatcactaaatagacacaaaacacctatgaagttgcatgattttggataaaacttaatta 15298915  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    |||||| || |||||| |||||||||||| ||||||||||||||||||| || | |||||  ||| |||||| |||  ||||||||| ||||||  ||||    
T  15298916 caatgattcaaatgaatacaatacaaaaacttcctcaaaccattgacaactcttgtaaatgacttctaatttgcctgcaaatgcaaagaaaatatataaa 15299015  T
Q  206 aacatagcttaaagtatcatatgatgt 232  Q
    |||||| | |||| |||||||||||||    
T  15299016 aacataacctaaaatatcatatgatgt 15299042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 231
Target Start/End: Complemental strand, 26102221 - 26102000
Alignment:
Q  10 ttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaat 109  Q
    ||||| ||||||||||||||| |||||| || ||| ||| ||||||||||||||||||||  ||| ||||| || |||| |||||||| ||||||||||     
T  26102221 ttcacgtgatgtcttgttttgtcgatttgcacgatatctcactaaaaagactcaaaacacccatggagttgcatgatttaggataaaagtgaattacaac 26102122  T
Q  110 gactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaaca 209  Q
     ||||||||||||||||||||||| | ||||||||||||||| |||| ||||||||  | | | |||| | || ||||||||| ||||||||||||||||    
T  26102121 aactcgaatgaaaacaatacaaaatggtcctcaaaccattgataaattctctaaatgacctcttatttgcgttcaaatgcaaagaaaataactaaaaaca 26102022  T
Q  210 tagcttaaagtatcatatgatg 231  Q
    | || |||| ||||||||||||    
T  26102021 tcgcctaaaatatcatatgatg 26102000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 232
Target Start/End: Complemental strand, 18795339 - 18795123
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    |||||||||||||||| |||||||| ||||||| ||||||| |||||||||||| |||| || || || | || |||||||| | ||||||||| ||||     
T  18795339 tgatgtcttgttttgctgatttacacgatttctcactaaaatgactcaaaacacctatgaagctgtatgacttaggataaaagtaaattacaattactca 18795240  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagctt 215  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||  | | | ||||||||| ||||||||| ||||| |||| ||||||||| |    
T  18795239 aatgaaaacgatacaaaatgttcctcaaaccattgataaatcctctaaatgacctcttattttccttcaaatgcaaagaaaatcactagaaacatagcct 18795140  T
Q  216 aaagtatcatatgatgt 232  Q
    ||| ||||| |||||||    
T  18795139 aaaatatcacatgatgt 18795123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 237
Target Start/End: Complemental strand, 31313720 - 31313488
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| |||||| ||||||| || |||||||||||||||||||||||| ||||||||||| |||| ||||| || |||| |||||||| |||||||    
T  31313720 atccttcacgtgatgtattgtttttccaatttacatgatttcttactaaaaaaactcaaaacacctatgaagttgcatgatttaggataaaagtgaatta 31313621  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat-atcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    ||| |||| ||| ||||||||||||||| |||||| ||  ||||||||| | |||||||| | || || |||| |||| ||||||||| |||||||||||    
T  31313620 caacgacttgaacgaaaacaatacaaaacgttcctaaagacattgacaacttctctaaatgaactctt-atttgccttcaaatgcaaagaaaataactaa 31313522  T
Q  205 -aaacatagcttaaagtatcatatgatgtccatc 237  Q
     |||||| || |||| |||||||||||| |||||    
T  31313521 gaaacatggcctaaattatcatatgatgaccatc 31313488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 227
Target Start/End: Original strand, 26854266 - 26854485
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| | |||||||||||||||| ||||||||||||||  ||||||||||||||||||  |||| ||||| || | || |||||||| |||||||    
T  26854266 atccttcacttaatgtcttgttttgccggtttacatgatttct--ctaaaaagactcaaaacatctatgaagttgtatgaattaggataaaattgaatta 26854363  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    ||| |||| ||||||||| |||||||||||||||||||| |||| |||| | |||||| |  ||| || |||   |||||||||||||||||||||||||    
T  26854364 caacgacttgaatgaaaagaatacaaaaagttcctcaaaacattaacaacttctctaattgacttatattttgtttttaaatgcaaataaaataactaaa 26854463  T
Q  206 aacatagcttaaagtatcatat 227  Q
    || |||||| |||  |||||||    
T  26854464 aatatagctaaaaacatcatat 26854485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 25126648 - 25126420
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| ||||||||| |||| |  ||||||||||||||| | ||||||||||||||||||||||  | |   || |||| ||||||||||||||||    
T  25126648 atccttcacgtgatgtcttatttttctaatttacatgatttctcattaaaaagactcaaaacacatatataatcacatgatttaggataaaactgaatta 25126549  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgc--aaataaaataacta 203  Q
    | | ||||| ||| ||||||||||||||| || |||||||||||||||| ||||| ||||  ||| || ||| |||| ||||||  ||| |||| |||||    
T  25126548 ccacgactcaaataaaaacaatacaaaaaatttctcaaaccattgacaactcctccaaatgacttctattttgccttcaaatgcaaaaaaaaaaaaacta 25126449  T
Q  204 aaaacatagcttaaagtatcatatgatgt 232  Q
    ||||||||||||||| |||||||||||||    
T  25126448 aaaacatagcttaaaatatcatatgatgt 25126420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 27461137 - 27461351
Alignment:
Q  16 tgatgtcttgttttg-ccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactc 114  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||  |||||| |||| ||||| ||||||| |||||||| ||||||| ||  |||     
T  27461137 tgatgtcttgttttttccgacttacatgatttcttactaaaaagactacaaacacctatgaagttgcataatttaggataaaagtgaattataacaactt 27461236  T
Q  115 gaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagct 214  Q
    ||||||||||||||||||| ||||||||||  || ||||| | ||||||||  | | | ||||   || |||| |||||||||||||||||||||||||     
T  27461237 gaatgaaaacaatacaaaatgttcctcaaattatggacaattgctctaaatgacctcttatttgtattcaaatacaaataaaataactaaaaacatagcg 27461336  T
Q  215 taaagtatcatatga 229  Q
    |||| ||||||||||    
T  27461337 taaaatatcatatga 27461351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 19257760 - 19257958
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    |||||||||||| |||| ||||||| ||||||| |||||||| ||||||||||| || | | ||| || |||| ||||||||  |||||||||||||| |    
T  19257760 tgatgtcttgttatgccaatttacacgatttctcactaaaaatactcaaaacacctaaggacttgcatgatttaggataaaatcgaattacaatgactag 19257859  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaa-taaaataactaaaaacatagc 213  Q
    ||||||||||||||| ||||||||||||| |||||||||   ||||||||   || ||||||| ||| ||||  |||  ||||||||||||||||||||    
T  19257860 aatgaaaacaatacagaaagttcctcaaatcattgacaacctctctaaatgaattctaatttttcttcaaatataaagaaaaataactaaaaacatagc 19257958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 30675653 - 30675495
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    |||||||||||||||||||   ||||||||||||||||||||| |||| |||| ||||||||||| |||| ||||| || || | ||| |||| || |||    
T  30675653 atccttcacatgatgtcttaaattgccgatttacatgatttctcactataaaacactcaaaacacctatggagttgcatgatataggacaaaagtgtatt 30675554  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    |||| ||||||| |||||||||||||| | |||||||||||||||||||| ||||||||    
T  30675553 acaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgacaactcctctaa 30675495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 21548806 - 21548674
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    |||||||||||||| ||||||||| |||||||  |||| |||||||| |||||| |||| ||||| ||  ||| ||||||||||||||||||| ||||||    
T  21548806 tgatgtcttgtttttccgatttacttgatttcacactagaaagactccaaacacttatggagttgcattttttaggataaaactgaattacaacgactcg 21548707  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccat 148  Q
    ||||||||||||| |||||||| ||||||||||    
T  21548706 aatgaaaacaatataaaaagtttctcaaaccat 21548674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 230
Target Start/End: Original strand, 15416920 - 15417144
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  || ||||||| |||||||| |||||||||||     |||||||||||||||||| ||| |||||| || ||||  ||||||| |||||||    
T  15416920 atccttcatgtggtgtcttgctttgccgaattacatgatttgactataaaaagactcaaaacacctatacagttgcatgatttaagataaaagtgaatta 15417019  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat-atcttttaattttcctttaaatgcaaataaaataactaa 204  Q
     ||||| | |||||||||||||| |||| ||| ||||||||||  |||| |||| ||||| |||| || ||||  ||| |||||| ||||||||||||||    
T  15417020 aaatgaattgaatgaaaacaataaaaaatgtttctcaaaccatgaacaactcctttaaatgatctctt-atttgtcttcaaatgcgaataaaataactaa 15417118  T
Q  205 aaacatagcttaaagtatcatatgat 230  Q
    |||||||| ||||| |||| ||||||    
T  15417119 aaacatagattaaaatatcttatgat 15417144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 30781929 - 30781803
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    |||||||||||||||||||| ||||  ||||||||||||| || |||| |||| ||||||||||| |||| ||||| || || | |||||||||||||||    
T  30781929 atccttcacatgatgtcttgatttgatgatttacatgattcctcactacaaaacactcaaaacacctatggagttgtatgatcttggataaaactgaatt 30781830  T
Q  105 acaatgactcgaatgaaaacaatacaa 131  Q
    |||||| ||||| ||||||||||||||    
T  30781829 acaatgtctcgattgaaaacaatacaa 30781803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 162
Target Start/End: Original strand, 52271191 - 52271347
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| ||  || ||||||||||||||||||| |||||| |||||||||||||||||||  |||| ||||| ||||||| |||  ||| ||||| |    
T  52271191 atccttcacgtggcgttttgttttgccgatttacataatttctcactaaaaagactcaaaacatctatggagttgcataatttaggaataaagtgaatga 52271290  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctcta 162  Q
    ||| ||||  |||||||| | |||| ||| |||||||||||| |||||| |||||||    
T  52271291 caacgacttaaatgaaaaaagtacacaaatttcctcaaaccaatgacaactcctcta 52271347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 162
Target Start/End: Complemental strand, 26657645 - 26657488
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| | |||||||| |||| ||||||||||||||| | |||| |||| ||||||||||| |||| |||||  | || | |||||||| ||||||    
T  26657645 atccttcacctaatgtcttgatttgtcgatttacatgatttttcactacaaaacactcaaaacacctatggagttgcgtgatctaggataaaagtgaatt 26657546  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctcta 162  Q
    |||| || |||| |||||||||||||  |  ||||||||||||||||||| |||||||    
T  26657545 acaacgaatcgagtgaaaacaatacattatattcctcaaaccattgacaactcctcta 26657488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 162
Target Start/End: Complemental strand, 50047321 - 50047193
Alignment:
Q  35 tttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaa 133  Q
    ||||||||||||||  ||| |||| |||||||||| ||||| ||||| || |||| |||||||| |||||||| ||||||||| |||||||||||||| |    
T  50047321 tttacatgatttctcgctacaaaacactcaaaacatatatggagttgtatgatttaggataaaagtgaattaccatgactcgagtgaaaacaatacaata 50047222  T
Q  134 agttcctcaaaccattgacaaatcctcta 162  Q
     ||| |||||| ||||||||| |||||||    
T  50047221 tgtttctcaaatcattgacaactcctcta 50047193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 218
Target Start/End: Complemental strand, 18391240 - 18391038
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    ||||||||| ||| ||  |||||||||||||||| ||||||| |||| |||| | |||| | ||| || || | |||||||| | |||||||| |||||     
T  18391240 tgatgtcttatttcgctaatttacatgatttcttcctaaaaatactctaaacgcctatggaattgcatgatctaggataaaagttaattacaacgactca 18391141  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagctt 215  Q
    |||||||| |||| |||| ||| |||||||||||||||| | || |||||  | | | ||||  |||||||| || | ||||||||||||||||| ||||    
T  18391140 aatgaaaataatataaaatgttactcaaaccattgacaacttctttaaatgacatcttatttgtctttaaatacacagaaaataactaaaaacatggctt 18391041  T
Q  216 aaa 218  Q
    |||    
T  18391040 aaa 18391038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 211
Target Start/End: Complemental strand, 34381875 - 34381671
Alignment:
Q  10 ttcacatgatgtcttgttttgccgatttacatgatttcttacta---aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattac 106  Q
    ||||| |||||| ||| |||| |||||||||| |||| | ||||   |||| ||||||||||| |||| |||||  | |||| | ||| || ||||||||    
T  34381875 ttcacgtgatgttttgatttgtcgatttacattatttttcactatacaaaatactcaaaacacctatgaagttgcgtgatttagaatagaagtgaattac 34381776  T
Q  107 aatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaa 206  Q
    || ||||||||||||||||||| || | |||| |||||||||| |||| ||||||||||  | | | |||| |||| ||||||||||||||  | |||||    
T  34381775 aacgactcgaatgaaaacaatataatatgttcttcaaaccattaacaactcctctaaattacatcttatttgccttcaaatgcaaataaaactaataaaa 34381676  T
Q  207 acata 211  Q
    |||||    
T  34381675 acata 34381671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 11769950 - 11770098
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactc 114  Q
    |||||||||| |||  ||||||||||||||||| |||  |||| |||||| ||||  ||| ||||  || |||| |||||||| |||||||||| ||| |    
T  11769950 tgatgtcttgatttttcgatttacatgatttctcactgcaaaacactcaacacacccatgaagtttcatgatttaggataaaagtgaattacaacgacac 11770049  T
Q  115 gaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    || |||||||||||||| | |||||| ||||||||||||||| ||||||    
T  11770050 gagtgaaaacaatacaatatgttccttaaaccattgacaaattctctaa 11770098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 153
Target Start/End: Original strand, 25730517 - 25730665
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  |||| ||||| |||| |||||||||||||||||  ||| |||| ||||||||||| | || ||||| || |||| |||||||| ||||||    
T  25730517 atccttcatgtgatatcttgatttgtcgatttacatgatttctcgctacaaaacactcaaaacacctgtgaagttgcatgatttaggataaaattgaatt 25730616  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgaca 153  Q
     |||||| | ||||||||||||||||| | | ||||||| |||||||||    
T  25730617 tcaatgatttgaatgaaaacaatacaatacgctcctcaagccattgaca 25730665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 12810406 - 12810334
Alignment:
Q  90 ggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctcta 162  Q
    |||||||| |||||||||| |||| ||||||||||||||||| | |||||||||||||||||||| |||||||    
T  12810406 ggataaaaatgaattacaacgacttgaatgaaaacaatacaatatgttcctcaaaccattgacaactcctcta 12810334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 151
Target Start/End: Original strand, 8247607 - 8247749
Alignment:
Q  10 ttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaa 108  Q
    ||||| |||||||||| ||||  ||||||||||||| || |||| |||| ||||||||||| |||| ||||| || || | || ||||||  ||||||||    
T  8247607 ttcacgtgatgtcttgatttgttgatttacatgattcctcactacaaaacactcaaaacacctatggagttgcatgatctagggtaaaacaaaattacaa 8247706  T
Q  109 tgactcgaatgaaaacaatacaaaaagttcctcaaaccattga 151  Q
    |||||| | |||||| |||| || | |||||||||||||||||    
T  8247707 tgactcaagtgaaaataataaaatatgttcctcaaaccattga 8247749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 12423915 - 12424009
Alignment:
Q  60 ctcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    ||||||||||||||| ||||| || || |  |||||||||||||||||||||||||| |||||||||||  | | ||||||||||||||| ||||    
T  12423915 ctcaaaacacatatggagttgcatgatctaagataaaactgaattacaatgactcgagtgaaaacaatatcatatgttcctcaaaccattaacaa 12424009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 25494444 - 25494583
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    |||||||||| |||| ||||||||||||||||| ||||        |||||||| |||| ||||| || |||| |||||||| | |||||||| |||||     
T  25494444 tgatgtcttgatttgtcgatttacatgatttctcacta--------caaaacacctatgtagttgcatgatttaggataaaagtaaattacaaggactca 25494535  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    |  |||||||| |||| | |||||||||||||||||||| ||||||||    
T  25494536 agagaaaacaagacaatatgttcctcaaaccattgacaactcctctaa 25494583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 25727855 - 25728000
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  |||| | ||| |||| ||||||||||||||||| |||| |||| ||||||||||| |||  ||||| || |||| |||||||| ||||||    
T  25727855 atccttcatgtgatatattgatttgtcgatttacatgatttctcactacaaaacactcaaaacacctattgagttgcatgatttaggataaaagtgaatt 25727954  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattg 150  Q
    |||| || | || |||||||||||||| |  ||||| |||||||||    
T  25727955 acaacgattagagtgaaaacaatacaatacattccttaaaccattg 25728000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 25736263 - 25736408
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  |||| | ||| |||| ||||||||||||||||| |||| |||| ||||||||||| |||  ||||| || |||| |||||||| ||||||    
T  25736263 atccttcatgtgatatattgatttgtcgatttacatgatttctcactacaaaacactcaaaacacctattgagttgcatgatttaggataaaagtgaatt 25736362  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattg 150  Q
    |||| || | || |||||||||||||| |  ||||| |||||||||    
T  25736363 acaacgattagagtgaaaacaatacaatacattccttaaaccattg 25736408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 13807747 - 13807840
Alignment:
Q  54 aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaacca 147  Q
    |||||||||||||||  |||| ||||| || ||| ||||| ||  |||||||||| |||| ||||||||||||||||||| |||| ||||||||    
T  13807747 aaaagactcaaaacaactatgaagttgcatgattagggatgaacgtgaattacaacgacttgaatgaaaacaatacaaaatgttcatcaaacca 13807840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 18300949 - 18301098
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| |||||||||| |||| | ||||||||||||  | |||  |||| ||||||||||| |||| ||||| || ||||  ||||||| | ||||    
T  18300949 atccttcacgtgatgtcttgatttgtctatttacatgattcatcactttaaaacactcaaaacacctatgaagttgcatgattttcgataaaagtcaatt 18301048  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    |||| ||||  || ||||||| ||||| |  |||||||||||||||||||    
T  18301049 acaacgactttaaagaaaacagtacaatatattcctcaaaccattgacaa 18301098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 21550933 - 21551049
Alignment:
Q  113 tcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatag 212  Q
    ||||||||||||||||||||| |||||||||||||| ||||| |||||||| |  | | | |||| |||| ||||||  | |||||||||| ||||||||    
T  21550933 tcgaatgaaaacaatacaaaatgttcctcaaaccatagacaactcctctaattgacctctgatttgccttcaaatgc--agaaaataactagaaacatag 21551030  T
Q  213 cttaaagtatcatatgatg 231  Q
    |  ||| |||| |||||||    
T  21551031 cacaaaatatcgtatgatg 21551049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 19884275 - 19884195
Alignment:
Q  71 tatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattga 151  Q
    |||| ||||| || |||| ||||||||  ||||||||  || |||||||||||||||| |||| |||||||||||||||||    
T  19884275 tatggagttgcatgatttaggataaaagagaattacatcgaatcgaatgaaaacaatataaaaggttcctcaaaccattga 19884195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 23223554 - 23223422
Alignment:
Q  33 gatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaa-taca 130  Q
    |||||||||||||||| |||| |||| | | ||||||| | || ||||| || |||| |||||||| | |||||||| || |||| |||||| || ||||    
T  23223554 gatttacatgatttctcactacaaaacattaaaaacacctttggagttgcatgatttaggataaaagtaaattacaacgaatcgagtgaaaaaaaataca 23223455  T
Q  131 aaaagttcctcaaaccattgacaaatcctctaa 163  Q
    |   |||||||||||||||||||| ||||||||    
T  23223454 atgtgttcctcaaaccattgacaactcctctaa 23223422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 154
Target Start/End: Original strand, 25266340 - 25266440
Alignment:
Q  54 aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgaca 153  Q
    |||| |||||||||||||||| ||||  || ||    ||||||| |||||||||||||||||| |||||||||||||| | |||  ||| ||||||||||    
T  25266340 aaaacactcaaaacacatatgaagttccatgatccaagataaaaatgaattacaatgactcgagtgaaaacaatacaatatgtttttcataccattgaca 25266439  T
Q  154 a 154  Q
    |    
T  25266440 a 25266440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 230
Target Start/End: Original strand, 25965410 - 25965545
Alignment:
Q  95 aaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaata 194  Q
    |||||||||||||| ||||||||||| || |||||||||  || ||||||| ||  |||| |||| |||||  | | | ||||  |||||| | |||| |    
T  25965410 aaactgaattacaacgactcgaatgagaagaatacaaaatattgctcaaactatgtacaactcctttaaatgacctcttatttgtctttaagtacaaaga 25965509  T
Q  195 aaataactaaaaacatagcttaaagtatcatatgat 230  Q
    ||||||||||||||||| | ||||  ||||||||||    
T  25965510 aaataactaaaaacataacctaaaacatcatatgat 25965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 15850975 - 15851039
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacaca 70  Q
    |||| ||| ||| ||||||| |||||| ||||||||||||||| | |||||| ||||||||||||    
T  15850975 atccatcatatggtgtcttgctttgccaatttacatgatttctcaataaaaatactcaaaacaca 15851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 34935303 - 34935349
Alignment:
Q  180 ctttaaatgcaaataaaataactaaaaacatagcttaaagtatcata 226  Q
    |||||||| |||| |||||||||||||||||||| |||| |||||||    
T  34935303 ctttaaattcaaagaaaataactaaaaacatagcctaaaatatcata 34935349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 23521673 - 23521722
Alignment:
Q  4 ttatccttcacatgatgtcttgttttgccgatttacatgatttcttacta 53  Q
    ||||||||||| |||||||||| | || ||||||||||||||||| ||||    
T  23521673 ttatccttcacgtgatgtcttgatgtgtcgatttacatgatttctcacta 23521722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 1779 - 1984
Alignment:
Q  5 tatccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||||||||| |||||||||||| |||| |||||||||| |||||||||| |||||  || ||   ||||| ||||||| ||||||||||  |||    
T  1779 tatccttcacatgatctcttgttttgccaatttccatgatttctcactaaaaagattcaaataacctacaaagttgcataatttaggataaaactagatt 1878  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    ||||||||| |||||||||||||||||||| ||||| ||| ||||||||| || ||||| ||  || |||  |||||||||||||||| |||||||||||    
T  1879 acaatgactagaatgaaaacaatacaaaaatttccttaaatcattgacaactcatctaattaagttctaa--ttcctttaaatgcaaagaaaataactaa 1976  T
Q  205 aaacatag 212  Q
    ||||||||    
T  1977 aaacatag 1984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 8e-45; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 232
Target Start/End: Original strand, 17881460 - 17881670
Alignment:
Q  21 tcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatga 120  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||| || |||  ||||| || ||||  ||||||| | ||||||||||| ||||||||    
T  17881460 tcttgtttttccgatttacatgacttctcactaaaaagactcaaaatacctattaagttgcatgatttatgataaaattaaattacaatgattcgaatga 17881559  T
Q  121 aaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagt 220  Q
    ||| |||||||||||||||| ||| ||||||||| |||| |||||  ||| |||||| |||| |||||||||||| | || |||||||||| |||||| |    
T  17881560 aaataatacaaaaagttcctaaaatcattgacaactcctttaaatgacttctaatttgccttcaaatgcaaataata-aagtaaaaacatatcttaaaat 17881658  T
Q  221 atcatatgatgt 232  Q
    ||||||||||||    
T  17881659 atcatatgatgt 17881670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 30405762 - 30405578
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||||||||||| |||| ||||||||||||||||||||||| |||||||| ||||||||||| |||| ||||| ||  ||| |||||||  |||||||    
T  30405762 atccttcacatgatttcttattttgccgatttacatgatttctcactaaaaa-actcaaaacacctatggagttgcatggtttaggataaag-tgaatta 30405665  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaa 192  Q
    |||||| || ||| |||||||||||||||||||||||||||||| |||| |||||||| |  ||| |||||| |||| |||||||||    
T  30405664 caatgagtcaaataaaaacaatacaaaaagttcctcaaaccattaacaactcctctaattgacttctaatttaccttcaaatgcaaa 30405578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 3268912 - 3269072
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  |||| |||||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||| || |||| |||||||| |||||||    
T  3268912 atccttcatgtgatatcttgttttgccgatttacatgatttctcactaaaaagacttaaaacacatacgaagttgcatgatttaggataaaagtgaatta 3269011  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaata 166  Q
    |||  |||| || ||||||||||||||| ||| ||||||||| |||||| |||||||||||    
T  3269012 caacaactcaaacgaaaacaatacaaaatgttactcaaaccaatgacaactcctctaaata 3269072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 29544688 - 29544462
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaag-actcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  |||||||||| |||| |||||||||||||| |||||||||||  ||||||||||| |||| | ||| | ||||| ||| |||| ||||||    
T  29544688 atccttcatgtgatgtcttggtttgtcgatttacatgattccttactaaaaaacactcaaaacacttatggaattgcacaatttaggagaaaagtgaatt 29544589  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    |||| ||||||| |||||||||||||| | ||||||||||| |||||||| |||||||| | || | | ||||  ||| ||||||||| ||||| | |||    
T  29544588 acaacgactcgagtgaaaacaatacaatatgttcctcaaactattgacaactcctctaactctcatcttatttgtcttcaaatgcaaagaaaattaataa 29544489  T
Q  205 aaacatagcttaaagtatcatatgatg 231  Q
    |||||||||  ||| ||||||||||||    
T  29544488 aaacatagccaaaaatatcatatgatg 29544462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 8308981 - 8309103
Alignment:
Q  9 cttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaa 108  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||| ||||| || |||| |||||||||| ||| ||||    
T  8308981 cttcacgtgatgtcttgttttgctgatttacatgatttcttactaaaaagactcaaaacatgtatggagttgcatgatttaggataaaactaaatcacaa 8309080  T
Q  109 tgactcgaatgaaaacaatacaa 131  Q
    |||||| ||||||||||||||||    
T  8309081 tgactcaaatgaaaacaatacaa 8309103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 228
Target Start/End: Complemental strand, 18496733 - 18496511
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||||||  ||||||  ||||| |||||||||||||| ||| || ||| || |||||||||| |||| ||| | || |||| |||||||| |||||||    
T  18496733 atccttcactcgatgtcccgtttttccgatttacatgatatctcaccaaataggctcaaaacacctatgaagtcgcatgatttaggataaaaatgaatta 18496634  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    |||||| ||||||||||||||| |||| |||||||||||| |||||||| | ||||||||  |   |  |||||||| ||||||||| ||||  ||||||    
T  18496633 caatgattcgaatgaaaacaattcaaatagttcctcaaacaattgacaacttctctaaattgcaacttgttttccttcaaatgcaaagaaaactactaaa 18496534  T
Q  206 aacatagcttaaagtatcatatg 228  Q
    |||||||| |||| |||||||||    
T  18496533 aacatagcctaaaatatcatatg 18496511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 20461594 - 20461742
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| |||   ||||  | |||| |||| ||| ||| |||    
T  20461594 atccttcacttgatgtcttattttgccgatttacatgatttctcactaaaaagactcgaaacacctatcatgttgcgtgatttaggatgaaattgagtta 20461693  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    ||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  20461694 caacgactcgaatgaaaacaatacaaattgttcctcaaaccattgacaa 20461742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 24596960 - 24597135
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| || | ||||| || |||| |||||||| |||||||||| |||||     
T  24596960 tgatgtcttgttttgccgatttacacgatttctcactaaaaagacttaaaacacctacggagttgcatgatttaggataaaattgaattacaacgactca 24597059  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaa 191  Q
     || |||||||| |||||| | | ||||||||||||||| || ||||| |  ||| ||||||||||| ||||||||    
T  24597060 gatcaaaacaatgcaaaaactccatcaaaccattgacaactcttctaattgacttctaattttccttcaaatgcaa 24597135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 1074621 - 1074461
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaa-gactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    |||||| || |||||||||| ||| || ||||||||||||||| |||||||| ||| |||||||| |||| ||||| ||||||| ||||||||   ||||    
T  1074621 atcctttacttgatgtcttgcttttccaatttacatgatttctcactaaaaaagacacaaaacacttatggagttgtataatttaggataaaagcaaatt 1074522  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    ||||||| ||||||||||| |||||||   |||||||||||||||||||| ||||||||||    
T  1074521 acaatgaatcgaatgaaaataatacaattggttcctcaaaccattgacaactcctctaaat 1074461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 96 - 214
Target Start/End: Complemental strand, 8606147 - 8606029
Alignment:
Q  96 aactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataa 195  Q
    |||||| |||||| |||||||||||||||||| | ||||||||||||||||||||| || |||||||| |   || ||||||||||||||| ||||||||    
T  8606147 aactgatttacaacgactcgaatgaaaacaatgccaaaagttcctcaaaccattgaaaactcctctaattgatttctaattttcctttaaacgcaaataa 8606048  T
Q  196 aataactaaaaacatagct 214  Q
    |||||||||||||||||||    
T  8606047 aataactaaaaacatagct 8606029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 23125069 - 23124909
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    |||||||||||||||||||| || | ||||||||||||||||| |||| |||| ||||||||||| |||  ||||| || |||| |||||||  ||||||    
T  23125069 atccttcacatgatgtcttgattggtcgatttacatgatttctcactagaaaacactcaaaacacctatagagttgtatgattttggataaatgtgaatt 23124970  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    |||| ||||||| |||||||||||||| | |||||||| |||| | |||| ||||||||||    
T  23124969 acaacgactcgagtgaaaacaatacaatatgttcctcagaccactaacaactcctctaaat 23124909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 5312732 - 5312891
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| |||||| |  ||||||||||||||||||||| | |||||||||||||||||||| |||| ||||| ||  | |  ||||||| |||||||    
T  5312732 atccttcacttgatgtttatttttgccgatttacatgatttatcactaaaaagactcaaaacacctatggagttgcatgctataagataaaagtgaatta 5312831  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    ||| ||||| ||||||||||||||||| ||||||| | |||||| |||| | ||||||||    
T  5312832 caacgactcaaatgaaaacaatacaaatagttccttagaccattaacaacttctctaaat 5312891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 7372519 - 7372670
Alignment:
Q  14 catgatgtcttgttttgccgatttacatgatttcttactaaaaag-actcaaaacacatatgcagttgaataatttgg-gataaaactgaattacaatga 111  Q
    |||||| ||||| ||||| |||||||| ||||||| ||||||||  ||| ||||||| |||| ||||| || |||| | ||||||| |||||||||| ||    
T  7372519 catgatatcttgatttgctgatttacaagatttctcactaaaaaacactgaaaacacctatgaagttgcatgatttcgtgataaaattgaattacaacga 7372618  T
Q  112 ctcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    ||||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  7372619 ctcgaatgaaaacaatacaaaaagttcatcaaaccaatgacaactcctctaa 7372670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 231
Target Start/End: Original strand, 22532601 - 22532815
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttg--ggataaaactgaattacaatgact 113  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||| |||||||    ||||  || ||||   |||||||| ||||||| |  || |    
T  22532601 tgatgtcttgttt-gccgatttacatgatttctcactaaaaatactcataacacatca--agttccatgatttttaggataaaagtgaattatagcgaat 22532697  T
Q  114 cgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagc 213  Q
    | ||||||||||||| |||| |||||||||||||| || || ||||||| ||  | ||| |||||| || |||| |||||||||||||||||||||||||    
T  22532698 ccaatgaaaacaatagaaaatgttcctcaaaccatggataactcctctacatgaccttttattttctttcaaatacaaataaaataactaaaaacatagc 22532797  T
Q  214 ttaaagtatcatatgatg 231  Q
     |||| ||||||||||||    
T  22532798 ctaaaatatcatatgatg 22532815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 228
Target Start/End: Complemental strand, 4828942 - 4828737
Alignment:
Q  21 tcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatga 120  Q
    |||||||||  |||| |||||||||||| | |||||||||||||  ||  |||| ||||| || |||| |||||||| | ||||||||||| |||| | |    
T  4828942 tcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaa 4828845  T
Q  121 aaacaatacaaaaagttcctcaaaccattgacaaatcctctaaata-tcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaag 219  Q
    ||| ||||||||||||||||||||||||||| || ||||| |||||  |||| |||||||||| ||||||||||||    |||||||| | |||| |||     
T  4828844 aaagaatacaaaaagttcctcaaaccattgaaaactcctc-aaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaa 4828746  T
Q  220 tatcatatg 228  Q
    |||||||||    
T  4828745 tatcatatg 4828737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 7142267 - 7142118
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| |||||||||| |||| ||||||||||||||||| |||| |||| ||| ||||||| |||| ||||| || || | |||||||| ||||||    
T  7142267 atccttcacgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacacttaaaacacctatggagttgcatgatcttggataaaagtgaatt 7142168  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    |||| ||||||| ||||| ||||| || | |||||| |||||||||||||    
T  7142167 acaacgactcgagtgaaagcaataaaatatgttccttaaaccattgacaa 7142118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 213
Target Start/End: Original strand, 22067748 - 22067961
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacat--gatttcttacta-aaaagactcaaaacaca--tatgcagttgaataatttgggataaaactg 100  Q
    |||||||||||||||||||| ||||  |||||||||  |||| || |||| |||| |||||||| | |  |||| ||||| || || | |||||||| ||    
T  22067748 atccttcacatgatgtcttgatttgatgatttacatatgattcctcactacaaaacactcaaaaaatacctatggagttgcatgatctaggataaaattg 22067847  T
Q  101 aattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaat-aaaata 199  Q
    |||||||||||||||| |||||||||||||  | |||||||||||||||||||| |||| ||| | || | | ||||  ||| |||||||||| |||||     
T  22067848 aattacaatgactcgagtgaaaacaatacattatgttcctcaaaccattgacaactcctttaactctcatcttatttgtcttcaaatgcaaataaaaatt 22067947  T
Q  200 actaaaaacatagc 213  Q
    ||||||||||||||    
T  22067948 actaaaaacatagc 22067961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 1255208 - 1255317
Alignment:
Q  54 aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgaca 153  Q
    |||| ||||||||||| |||| ||||| || |||| |||||||| |||||||||||||||||| ||||||||||||||    ||||||||||||||||||    
T  1255208 aaaacactcaaaacacctatgaagttgcatgatttaggataaaaatgaattacaatgactcgagtgaaaacaatacaatttattcctcaaaccattgaca 1255307  T
Q  154 aatcctctaa 163  Q
    | ||||||||    
T  1255308 actcctctaa 1255317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 12358733 - 12358864
Alignment:
Q  31 ccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaataca 130  Q
    |||||||| || |||||| |||||||||||||||||||| |||| |||||||| |||| |||||||| |||||||||| ||||| ||||| || ||||||    
T  12358733 ccgatttatattatttctcactaaaaagactcaaaacacctatgaagttgaatgatttaggataaaaatgaattacaacgactcaaatgagaaaaataca 12358832  T
Q  131 aaaagttcctcaaaccattgacaaatcctcta 162  Q
    |||  || |||||||  | ||||| |||||||    
T  12358833 aaatatttctcaaacattggacaactcctcta 12358864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 4977766 - 4977952
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaaga-ctcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  |||||||||| ||||   ||||||||||||||| |||| |||   |||| |||   |||| ||||| ||||||| |||||||| ||||||    
T  4977766 atccttcatgtgatgtcttgatttgtatatttacatgatttctcactataaaccgctcacaacctctatgaagttgcataatttaggataaaagtgaatt 4977865  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaa 191  Q
    |||| |||| |||||| || |||||||||| ||| |||||||| |||||| |||| ||| |  ||| |||||| |||||||||||||    
T  4977866 acaacgacttgaatgataaaaatacaaaaaattcttcaaaccaatgacaactcctttaattgacttataatttacctttaaatgcaa 4977952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 7815492 - 7815338
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    |||||||||||||||||||  ||||  |||||||||||||  | |||| |||| ||||||||||| |||| ||||| || |||| | |||||||||||||    
T  7815492 atccttcacatgatgtctttatttgttgatttacatgattcatcactacaaaacactcaaaacacctatgaagttgcatgatttagaataaaactgaatt 7815393  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcct 159  Q
    ||||  || ||| |||||| ||||||| | ||| || ||||||||||||| ||||    
T  7815392 acaaccacccgagtgaaaaaaatacaatatgtttcttaaaccattgacaagtcct 7815338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 231
Target Start/End: Original strand, 2353199 - 2353412
Alignment:
Q  17 gatgtcttgttttgccgatttacatgatt----tcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgac 112  Q
    ||||||||| |||| ||||||||||||||    ||| ||||||||| | |||||||| |||| ||||| || |||| ||||     |||||||||| | |    
T  2353199 gatgtcttgctttgtcgatttacatgattaatttctcactaaaaaggcccaaaacacctatggagttgcatgatttaggatg----tgaattacaacgtc 2353294  T
Q  113 tcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatag 212  Q
    ||||||||| ||||||||||| ||||| |||| |||  |||| ||||||||||  | | | ||| | ||| ||||||||| |||| ||||||||||||||    
T  2353295 tcgaatgaatacaatacaaaatgttccccaaagcatgtacaactcctctaaatgacctcttattgt-cttcaaatgcaaagaaaacaactaaaaacatag 2353393  T
Q  213 cttaaagtatcatatgatg 231  Q
    | |||| ||||||| ||||    
T  2353394 cctaaaatatcatacgatg 2353412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 10292925 - 10292797
Alignment:
Q  4 ttatccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaa 102  Q
    |||||||||||||||||||||| ||||  ||||||||||||| || |||| |||| | || |||||| ||||  |||| || || | |||||||||||||    
T  10292925 ttatccttcacatgatgtcttgatttgatgatttacatgattcctcactacaaaatagtctaaacacctatggtgttgcatgatcttggataaaactgaa 10292826  T
Q  103 ttacaatgactcgaatgaaaacaatacaa 131  Q
    |||||| ||||||| |||||| |||||||    
T  10292825 ttacaacgactcgattgaaaaaaatacaa 10292797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 20470767 - 20470919
Alignment:
Q  17 gatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    ||||||||| |||| ||||||||||| ||| | |||| |||| ||||||||||  ||||||| || || |||| || | ||| |||||||||| ||||      
T  20470767 gatgtcttgatttgtcgatttacatgctttatcactataaaacactcaaaacagctatgcagatgcatgatttaggctgaaagtgaattacaacgactta 20470866  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatc 168  Q
    | ||||||||||| || | |||||||||||||||||||| |||||||| ||||    
T  20470867 agtgaaaacaatataatatgttcctcaaaccattgacaactcctctaattatc 20470919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 218
Target Start/End: Complemental strand, 46054850 - 46054654
Alignment:
Q  20 gtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatg 119  Q
    ||||||||||||| |||||||| |||||| |||||| || ||||||  || |||| ||||| || ||||   |||||| | |||||||| |||| ||||     
T  46054850 gtcttgttttgccaatttacataatttctaactaaagaggctcaaa--acttatgaagttgcatgatttattataaaagtaaattacaacgacttgaatt 46054753  T
Q  120 aaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaa 218  Q
    ||||||||| |||  |||||||||| || |||||| |||| |||||  | | | |||| |||| |||| |||| ||||||| |||||||||||| ||||    
T  46054752 aaaacaatataaattgttcctcaaatcaatgacaactcctttaaatgacatcttatttgccttcaaatacaaaaaaaataattaaaaacatagcataaa 46054654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 7361665 - 7361766
Alignment:
Q  91 gataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa-atatcttttaattttcctttaaatgc 189  Q
    ||||||| ||| ||||||||||||||||||||||| |||||||||||| || ||||| |||||| |||||||| | || ||||||||| |||| ||||||    
T  7361665 gataaaagtgagttacaatgactcgaatgaaaacattacaaaaagttcatcgaaccaatgacaactcctctaatagat-ttttaatttgccttaaaatgc 7361763  T
Q  190 aaa 192  Q
    |||    
T  7361764 aaa 7361766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 228
Target Start/End: Complemental strand, 9755883 - 9755746
Alignment:
Q  91 gataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgca 190  Q
    ||||||| | |||||||| ||||||| |||||| ||||||||| ||||||||||| | |||||| |||||||| |  ||| |||||| |||| ||||||     
T  9755883 gataaaagtaaattacaacgactcgagtgaaaaaaatacaaaacgttcctcaaactagtgacaattcctctaattgacttataatttgccttcaaatgc- 9755785  T
Q  191 aataaaata-actaaaaacatagcttaaagtatcatatg 228  Q
    || |||||| |||||||||||||||  || |||||||||    
T  9755784 aagaaaatatactaaaaacatagctacaaatatcatatg 9755746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 9761361 - 9761487
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| |||||||||| |||| ||||||||||||||| | ||||  ||| ||||||||||| |||| | ||| ||||| | |||||||| ||||||    
T  9761361 atccttcacgtgatgtcttgatttgtcgatttacatgatttatcactattaaaaactcaaaacacctatggaattgcataatctaggataaaagtgaatt 9761460  T
Q  105 acaatgactcgaatgaaaacaatacaa 131  Q
    |||| |||| || |||||| |||||||    
T  9761461 acaacgactagagtgaaaaaaatacaa 9761487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 9801820 - 9801946
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    |||||||||||||||| ||| |||| ||||||||||||||| | ||||  ||| ||||||||||| |||| | ||| ||||| | |||||||| ||||||    
T  9801820 atccttcacatgatgttttgatttgtcgatttacatgatttatcactattaaaaactcaaaacacctatggaattgcataatctaggataaaagtgaatt 9801919  T
Q  105 acaatgactcgaatgaaaacaatacaa 131  Q
    |||| |||| || |||||| |||||||    
T  9801920 acaacgactagagtgaaaaaaatacaa 9801946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 191
Target Start/End: Complemental strand, 9800679 - 9800579
Alignment:
Q  91 gataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgca 190  Q
    ||||||| | |||||||| ||||||| |||||| ||||||||| ||||||||||| | |||||| |||||||| |  ||| ||||||||||| |||||||    
T  9800679 gataaaagtaaattacaacgactcgagtgaaaaaaatacaaaacgttcctcaaactagtgacaattcctctaattgacttataattttccttcaaatgca 9800580  T
Q  191 a 191  Q
    |    
T  9800579 a 9800579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 28952015 - 28952111
Alignment:
Q  135 gttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgatg 231  Q
    ||||||||||||||  |||| |||||||||||  |||||||||  ||| ||||| ||| ||||| ||||||| |||||| |||||||||||||||||    
T  28952015 gttcctcaaaccataaacaactcctctaaataatttttaatttatcttcaaatgtaaagaaaatgactaaaagcatagcctaaagtatcatatgatg 28952111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 3487312 - 3487375
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacac 69  Q
    ||||||||  ||||||||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  3487312 atccttcatttgatgtcttgttttgccgattcacatgatttctcattaaaaagactcaaaacac 3487375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 154
Target Start/End: Original strand, 21545811 - 21545894
Alignment:
Q  71 tatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    |||| ||||| || |||| |||||||| ||| |||||| ||||||| |||||||||||||| | ||||||||||||||||||||    
T  21545811 tatgtagttgcatgatttaggataaaagtgagttacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgacaa 21545894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 315342 - 315196
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||||||||||||||||| ||||   |||||||||||| |||||||        |||||||| |||| ||||| || || | |||||||||||||| |    
T  315342 atccttcacatgatgtcttgatttg---atttacatgattccttacta--------caaaacacctatggagttgcatgatctaggataaaactgaataa 315254  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    |||| |||||| ||| || ||||||| |  ||| ||||||||||||||| ||||||||    
T  315253 caataactcgagtgacaataatacaatatattcttcaaaccattgacaactcctctaa 315196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 2351072 - 2350994
Alignment:
Q  99 tgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattt 177  Q
    ||||||||||| ||| ||||||||||||||||||| ||| ||||||||||  |||| |||||||| ||||||| |||||    
T  2351072 tgaattacaataactggaatgaaaacaatacaaaatgtttctcaaaccatgaacaactcctctaattatctttcaattt 2350994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 7326827 - 7326915
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    |||||||||| ||||| |||||| ||||||||| ||||||| |||||||||||| |||  ||||| || ||| ||||| ||||||||||    
T  7326827 tgatgtcttgctttgctgatttatatgatttctcactaaaatgactcaaaacacctatcaagttgcatgattagggatgaaactgaatt 7326915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 168
Target Start/End: Complemental strand, 21471938 - 21471803
Alignment:
Q  33 gatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaa 131  Q
    ||||||||||||| || |||| |||| ||||||||||| |||| | ||| || || | |||||||||  ||||||||  |||||| ||||||||||| ||    
T  21471938 gatttacatgattcctcactacaaaacactcaaaacacctatggaattgcatgatctaggataaaacaaaattacaaa-actcgagtgaaaacaatataa 21471840  T
Q  132 aaagttcctcaaaccattgacaaatcctctaaatatc 168  Q
     | |||| | ||| |||||||||||||||||||||||    
T  21471839 tatgttcttaaaatcattgacaaatcctctaaatatc 21471803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 2632436 - 2632540
Alignment:
Q  59 actcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcc 158  Q
    ||||||||||| |||| ||||| || || | ||||||||||||||||||| || |||| |||||| ||||||| | |||||| ||| |||  |||| |||    
T  2632436 actcaaaacacctatgaagttgcatgatcttggataaaactgaattacaacgattcgattgaaaataatacaatatgttcctaaaatcatcaacaactcc 2632535  T
Q  159 tctaa 163  Q
    |||||    
T  2632536 tctaa 2632540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 7956264 - 7956190
Alignment:
Q  91 gataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    |||||||  ||||||||| |||||||||||||||||||||||   ||| | |||||||||| || ||||||||||    
T  7956264 gataaaagcgaattacaacgactcgaatgaaaacaatacaaatttttctttaaaccattgataactcctctaaat 7956190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 37145032 - 37144931
Alignment:
Q  62 caaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctct 161  Q
    |||||||| || | ||||| || |||| |||||||| |  ||||||| |||| ||||||||| |||||||||||||  ||||| || |||||| ||||||    
T  37145032 caaaacacctacggagttgcatgatttaggataaaaatatattacaacgacttgaatgaaaataatacaaaaagtttttcaaaacaatgacaactcctct 37144933  T
Q  162 aa 163  Q
    ||    
T  37144932 aa 37144931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 14649661 - 14649609
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaaca 68  Q
    |||| |||||||||||   |||||||||||| |||||||||||||||||||||    
T  14649661 tgatttcttgttttgctattttacatgattttttactaaaaagactcaaaaca 14649609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 10253700 - 10253814
Alignment:
Q  19 tgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaat 118  Q
    ||||||| |||||| | ||| ||||||| | | |||||| | ||| ||||  |||| ||||| | |||| ||||  ||| || ||||||| |||||||||    
T  10253700 tgtcttgctttgcccaattatatgatttatcaataaaaataatcagaacaactatgaagttgcacaattagggaagaaattggattacaaagactcgaat 10253799  T
Q  119 gaaaacaatacaaaa 133  Q
    |||||||||||||||    
T  10253800 gaaaacaatacaaaa 10253814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 16577344 - 16577444
Alignment:
Q  131 aaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgat 230  Q
    ||||||| || || ||||||| || ||||||||||  ||| ||||||  ||| ||||||||| |||||| | |||| |||| |||||| |||||||||||    
T  16577344 aaaagttacttaagccattgaaaactcctctaaatgacttctaatttgtcttcaaatgcaaagaaaatagccaaaa-cataccttaaaatatcatatgat 16577442  T
Q  231 gt 232  Q
    ||    
T  16577443 gt 16577444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 16588318 - 16588218
Alignment:
Q  131 aaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgat 230  Q
    ||||||| || || ||||||| || ||||||||||  ||| ||||||  ||| ||||||||| |||||| | |||| |||| |||||| |||||||||||    
T  16588318 aaaagttacttaagccattgaaaactcctctaaatgacttctaatttgtcttcaaatgcaaagaaaatagccaaaa-cataccttaaaatatcatatgat 16588220  T
Q  231 gt 232  Q
    ||    
T  16588219 gt 16588218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 228
Target Start/End: Complemental strand, 58914 - 58691
Alignment:
Q  6 atccttcacatgatgtcttgttttgccga-tttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  ||||||| |||||| || | |||||||||||||| ||||||||||||  ||| |||||   ||||| || |||  ||||||| ||| |||    
T  58914 atccttcatgtgatgtcctgttttacccaatttacatgatttctcactaaaaagacttgaaaaacataaagagttgcatgattcaggataaacctggatt 58815  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaa 204  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | |  ||| |||||| |||| ||||||| | |||||||| ||    
T  58814 acaatgacccgaatgaaaacaatacaaaaagttcctcaaaccattgacaactcctctgattgacttctaatttgccttcaaatgcatagaaaataaccaa 58715  T
Q  205 aaacatagcttaaagtatcatatg 228  Q
    |||||||||| |||  ||||||||    
T  58714 aaacatagctaaaaacatcatatg 58691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 12972343 - 12972557
Alignment:
Q  18 atgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaa 117  Q
    |||||||| ||| | ||||||||||||||||  ||||||||||||||||||| |||| ||||| || |||| ||||| ||||||||||||| | || |||    
T  12972343 atgtcttggttttctgatttacatgatttctccctaaaaagactcaaaacacgtatgaagttgcatgatttaggatacaactgaattacaacgtcttgaa 12972442  T
Q  118 tgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaa 217  Q
    ||||| ||||||||||  ||||  ||| ||||||||| ||||||||||  | | | | || |||| ||||||||| ||||||||||||||||||||  ||    
T  12972443 tgaaagcaatacaaaattttccgtaaaacattgacaactcctctaaatgacctcttagttgccttcaaatgcaaagaaaataactaaaaacatagccaaa 12972542  T
Q  218 agtatcatatgatgt 232  Q
    | ||||| |||||||    
T  12972543 aatatcaaatgatgt 12972557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 14768225 - 14768372
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    |||||||||||||||||||||||||||||||||  || |||||||||||||||  |||| | ||| ||  ||| | |||||  ||||||||||| |||||    
T  14768225 tgatgtcttgttttgccgatttacatgatttctatctgaaaagactcaaaacatttatgaaattgcatgttttagaataaatgtgaattacaataactcg 14768324  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    ||||||| ||||||||||| |||||||||||| |||||| ||||||||    
T  14768325 aatgaaaccaatacaaaaaattcctcaaaccaatgacaactcctctaa 14768372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 14924374 - 14924586
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    ||||||||||||| || | |||||||||||||| ||| |||||||||||||| | |||  | ||| || |||| | |||||| |||  ||||| ||||||    
T  14924374 tgatgtcttgtttagctggtttacatgatttctcacttaaaagactcaaaacccctatataattgcatgatttagaataaaagtgaggtacaacgactcg 14924473  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagctt 215  Q
    |||||| |  ||| |||  |||||||||||||||||||| ||||||||||  | | | |||| |||| ||||||||| |||||||||||||||||||| |    
T  14924474 aatgaataagatataaattgttcctcaaaccattgacaactcctctaaattacatattatttgccttcaaatgcaaagaaaataactaaaaacatagcct 14924573  T
Q  216 aaagtatcatatg 228  Q
    ||  |||||||||    
T  14924574 aatatatcatatg 14924586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 9396553 - 9396752
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||| || |||| | |||||  |||||||    
T  9396553 atccttcacgtgatgtcttgttttgccgattta-atgatttctcactaaaaagactcaaaacacatatgaagttgcatgatttagaataaagatgaatta 9396651  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaa 205  Q
    | |       |||||||||||||||| | ||||||  |||||||||  | ||||||||||  | | | ||||||||| ||||||||| || |||||| ||    
T  9396652 cca------aaatgaaaacaatacaagatgttcctataaccattgattactcctctaaatgacctcttattttccttcaaatgcaaagaacataacttaa 9396745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 26512753 - 26512930
Alignment:
Q  35 tttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaa 134  Q
    |||||||||||||| ||||  |||||||||||||  |||   |||| || || | || ||||| |||||||||| || |||||||||||||||||||||     
T  26512753 tttacatgatttctcactaggaagactcaaaacagctatcgggttgcatgatctaggttaaaagtgaattacaacgaatcgaatgaaaacaatacaaaat 26512852  T
Q  135 gttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatag 212  Q
    ||| | |||||||||||||| ||||||||||  | | | |||| |||| ||||||||| |||||||||||||||||||    
T  26512853 gttacacaaaccattgacaactcctctaaatgacctcttatttgccttcaaatgcaaacaaaataactaaaaacatag 26512930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 26517869 - 26518046
Alignment:
Q  35 tttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaa 134  Q
    |||||||||||||| ||||  |||||||||||||  |||   |||| || || | || ||||| |||||||||| || |||||||||||||||||||||     
T  26517869 tttacatgatttctcactaggaagactcaaaacagctatcgggttgcatgatctaggttaaaagtgaattacaacgaatcgaatgaaaacaatacaaaat 26517968  T
Q  135 gttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatag 212  Q
    ||| | |||||||||||||| ||||||||||  | | | |||| |||| ||||||||| |||||||||||||||||||    
T  26517969 gttacacaaaccattgacaactcctctaaatgacctcttatttgccttcaaatgcaaacaaaataactaaaaacatag 26518046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 17860392 - 17860552
Alignment:
Q  4 ttatccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaa 102  Q
    ||||||||||| ||||||| || ||||  || ||||||||||||| |||| |||| ||||||| ||| |||| ||||| || ||||  ||||||| | ||    
T  17860392 ttatccttcacgtgatgtcctgatttgttgaattacatgatttctcactacaaaacactcaaagcacgtatggagttgcatgatttaagataaaagtaaa 17860491  T
Q  103 ttacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    | |||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||||    
T  17860492 tgacaatgactcgagtgaaaataatacaaaatgttcctcaaaccattgacaaattctctaa 17860552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 24617677 - 24617567
Alignment:
Q  8 ccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattaca 107  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||  ||| ||||  || |||| |||||||||||||||||     
T  24617677 ccttcacatgatgtcttgttttgctgatttacataatttctcactaaaaagactcaaaacactcatgaagttacatgatttaggataaaactgaattacg 24617578  T
Q  108 atgactcgaat 118  Q
    | |||||||||    
T  24617577 acgactcgaat 24617567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 32930429 - 32930578
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||  |||  | ||| ||  ||  |||||||| ||||||| || |||||     
T  32930429 tgatgtcttgttttgccaatttacatgatttctcactaaaaagactcaaaacatctatcaaattgcatgtttaaggataaaagtgaattaaaacgactct 32930528  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
     ||| |||||| |||||| ||||| |||||||||||||| ||||||||||    
T  32930529 tatggaaacaaaacaaaatgttccgcaaaccattgacaactcctctaaat 32930578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 16439616 - 16439481
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcg 115  Q
    |||||||||||||| | |||||||||||||||| |||||||||||||||||||||| || ||||| || |||| |||||||| | ||||| || |||||     
T  16439616 tgatgtcttgtttttctgatttacatgatttctcactaaaaagactcaaaacacatgtgaagttgcattatttaggataaaagttaattataacgactc- 16439518  T
Q  116 aatgaaaacaatacaaaaagttcctcaaaccattgac 152  Q
    ||| |||||||||||||  || |||||||| ||||||    
T  16439517 aataaaaacaatacaaattgtccctcaaactattgac 16439481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 9943108 - 9943255
Alignment:
Q  18 atgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaa 117  Q
    |||||||||||| |||||||||||||||||| | |||||| ||| ||||||| |||| ||||| || |||| |||||||| ||||||||||   || |||    
T  9943108 atgtcttgtttttccgatttacatgatttctcaataaaaatactaaaaacacctatggagttgcatgatttaggataaaagtgaattacaacagcttgaa 9943207  T
Q  118 tgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    ||| ||| ||||||||  |||||||||| || ||||| ||||||||||    
T  9943208 tgataactatacaaaatattcctcaaacgatggacaactcctctaaat 9943255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 232
Target Start/End: Original strand, 20495790 - 20495966
Alignment:
Q  55 aaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaa 154  Q
    ||||||||||||||| |||| ||||| |||||||  ||||||| |||||||||| ||||| ||| |||||||| ||||| ||||||||||||||||| ||    
T  20495790 aaagactcaaaacacttatgaagttgcataatttaagataaaattgaattacaacgactcaaataaaaacaat-caaaatgttcctcaaaccattgataa 20495888  T
Q  155 atcctctaaat-atcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgatgt 232  Q
     | ||||| || | || |||| || |||| |||| |||| ||||| |||||||||||||| |||  |||||||||||||    
T  20495889 cttctctatatgacctcttaa-ttgccttcaaatacaaagaaaattactaaaaacatagcctaatttatcatatgatgt 20495966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 24507624 - 24507739
Alignment:
Q  99 tgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaat 198  Q
    ||||||| || ||| |||||||||||||||||||||||||||||||| |||||||| ||||||||    ||| |||||| |||| ||||||||||||       
T  24507624 tgaattaaaacgacacgaatgaaaacaatacaaaaagttcctcaaactattgacaattcctctaatagacttctaatttaccttcaaatgcaaataatta 24507723  T
Q  199 aactaaaaacatagct 214  Q
     |||||||||||||||    
T  24507724 cactaaaaacatagct 24507739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 17198788 - 17198905
Alignment:
Q  92 ataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaa 191  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||| ||||   ||||||||  ||| |||||| |||| |||| | |    
T  17198788 ataaaactgaattacaacaactcagatgaaaacaatacaaaaagttcctcaaaccattaacaa---ctctaaatgacttctaatttgccttcaaattcta 17198884  T
Q  192 ataaaataactaaaaacatag 212  Q
    | ||||||| |||||||||||    
T  17198885 agaaaataattaaaaacatag 17198905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 1755508 - 1755650
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    |||||||||||| |||||||  ||| | | ||||||||| | | |  ||||||||||||||||| |||| ||||  || ||| |||||| || |||||||    
T  1755508 atccttcacatggtgtcttgacttgtcaaattacatgatatatgaacaaaaagactcaaaacacgtatgtagttacatgattagggatacaagtgaatta 1755607  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccat 148  Q
    ||| || || |||||||||||||||||| | ||||||||||||    
T  1755608 caacgaatcaaatgaaaacaatacaaaatgatcctcaaaccat 1755650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 26499808 - 26499910
Alignment:
Q  21 tcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatga 120  Q
    ||||||||||||||||| |||||||||| |||||||| ||||| ||||| |||| | ||  || |||| ||||||||  ||||||||| |||| ||||||    
T  26499808 tcttgttttgccgatttgcatgatttctcactaaaaacactcataacacctatgaaattacatgatttaggataaaatcgaattacaacgacttgaatga 26499907  T
Q  121 aaa 123  Q
    |||    
T  26499908 aaa 26499910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 232
Target Start/End: Original strand, 33638517 - 33638656
Alignment:
Q  92 ataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat-atcttttaattttcctttaaatgca 190  Q
    |||||| ||||||||||||||| |||||||||| |||| |||  ||  ||||||||||||||||||||||||||   || |||||| |  || ||| |||    
T  33638517 ataaaaatgaattacaatgacttgaatgaaaac-atactaaatatttttcaaaccattgacaaatcctctaaatggcctcttaattgt-attcaaaagca 33638614  T
Q  191 aataaaataactaaaaacatagcttaaagtatcatatgatgt 232  Q
    ||||||||||||||||| ||||| |||| |||| ||| ||||    
T  33638615 aataaaataactaaaaaaatagcctaaaatatcttataatgt 33638656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 231
Target Start/End: Complemental strand, 13835748 - 13835544
Alignment:
Q  27 tttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaa 126  Q
    |||||||| ||||| ||||| | | |||||||||| |||||||||||| |  || || ||| ||||| ||| ||||||| | ||| || ||| |||||||    
T  13835748 tttgccgaattacaagatttatcaataaaaagacttaaaacacatatggaactgcatgattggggatgaaagtgaattatagtgaatcaaataaaaacaa 13835649  T
Q  127 tacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcata 226  Q
     || ||| |||||||||||||  ||||| |||||| |||  ||| | ||||  ||| | ||| ||| ||||||||| ||||||||||| |||  ||| ||    
T  13835648 caccaaatgttcctcaaaccaaggacaactcctcttaatgacttcttatttgtcttcatatgaaaagaaaataacttaaaacatagctgaaaacatctta 13835549  T
Q  227 tgatg 231  Q
    |||||    
T  13835548 tgatg 13835544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 15575093 - 15574934
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||| |||||||||| ||||   |||||||||||| ||  ||| |||| ||| |||| || |||| ||||| || || | || ||||||| ||||    
T  15575093 atccttcacgtgatgtcttgatttgttaatttacatgattcctcgctacaaaacacttaaaaaacctatggagttgcatgatctaggctaaaactaaatt 15574994  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    |||| |||| || ||||||||||| || | |||||||||| ||||||||| ||||||||||    
T  15574993 acaacgactagagtgaaaacaatataacatgttcctcaaa-cattgacaattcctctaaat 15574934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 13759484 - 13759555
Alignment:
Q  92 ataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    |||||| |||||||||| || |||| |||||||||| ||| | |||||||||||||||||||| ||||||||    
T  13759484 ataaaattgaattacaacgattcgagtgaaaacaattcaatatgttcctcaaaccattgacaactcctctaa 13759555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 16387288 - 16387354
Alignment:
Q  99 tgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    |||||||||| | ||||||| |||||||||||| || ||||||||||||||||||| || |||||||    
T  16387288 tgaattacaacggctcgaataaaaacaatacaataaattcctcaaaccattgacaactcatctaaat 16387354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 16438664 - 16438583
Alignment:
Q  147 attgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgatg 231  Q
    |||||||| ||||||||||| |||   ||||||||||||||||||| ||| |||||||||||||||  |||| ||||||| ||||    
T  16438664 attgacaactcctctaaataactt---attttcctttaaatgcaaagaaagtaactaaaaacatagactaaaatatcatacgatg 16438583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 207
Target Start/End: Original strand, 26518507 - 26518681
Alignment:
Q  34 atttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaa 133  Q
    ||||||||||||||||| ||| |||| |||||| || |||  ||||| || ||    ||||||  |||||||||| ||||||||||||||| ||||||||    
T  26518507 atttacatgatttcttattaagaagattcaaaatacctatcaagttgcatgatccttgataaaggtgaattacaacgactcgaatgaaaactatacaaaa 26518606  T
Q  134 agttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgc-aaataaaataactaaaaa 207  Q
     |   | ||||| | |||||| ||||||||||  | | | |||| |||| |||||| ||||||||||||||||||    
T  26518607 tgcaacacaaactactgacaactcctctaaatgacatcttatttaccttcaaatgcaaaataaaataactaaaaa 26518681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 231
Target Start/End: Complemental strand, 30355437 - 30355269
Alignment:
Q  62 caaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctct 161  Q
    |||||||| |||  ||||| || ||||  ||||||| ||||||| || |||| || |||||| ||||||| | |||  ||||||||||||||| | ||||    
T  30355437 caaaacacctataaagttgcatgatttatgataaaagtgaattaaaacgacttgagtgaaaa-aatacaatatgtttatcaaaccattgacaacttctct 30355339  T
Q  162 aaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatcatatgatg 231  Q
    || | || | | |||| |||| |||||||| |||||  ||||||||||||||  ||| ||||||||||||    
T  30355338 aactctcatcttatttaccttcaaatgcaagtaaaagtactaaaaacatagccaaaaatatcatatgatg 30355269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 33638451 - 33638501
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaa 56  Q
    ||||||||| |||| | |||||||||||||||||||||||||| |||||||    
T  33638451 atccttcacttgatatattgttttgccgatttacatgatttctcactaaaa 33638501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 16528002 - 16527901
Alignment:
Q  62 caaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctct 161  Q
    |||||||| |||| ||||| || || | |||||||| |||||||||| ||||||| ||||||||||| || | | | |||||||||  ||||| ||||||    
T  16528002 caaaacacctatgaagttgcatgatctaggataaaaatgaattacaacgactcgagtgaaaacaatataatatggtactcaaaccaccgacaactcctct 16527903  T
Q  162 aa 163  Q
    ||    
T  16527902 aa 16527901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 15165850 - 15165786
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttg 80  Q
    |||||||||| ||| |||||| ||||||||||| |||||||  ||||||||||| |||| |||||    
T  15165850 tgatgtcttgatttaccgattcacatgatttctcactaaaattactcaaaacacgtatggagttg 15165786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 197
Target Start/End: Complemental strand, 15998676 - 15998488
Alignment:
Q  10 ttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaa 108  Q
    |||||||||||||||| ||||   |||||||||||| || |||| |||| ||||||||||| |||| ||||| || || |  || |||||| |||| |||    
T  15998676 ttcacatgatgtcttgatttggtcatttacatgattcctcactacaaaacactcaaaacacctatgaagttgcatgatatatgagaaaacttaatttcaa 15998577  T
Q  109 tgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaa 197  Q
     || || |  ||||| ||||||| |  ||||||||||||| ||  | |||||||| | || | | ||||||||| ||||||||| ||||    
T  15998576 cgaatcaagggaaaagaatacaatattttcctcaaaccatggaacactcctctaactctcatatcattttccttcaaatgcaaagaaaa 15998488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 16387213 - 16387248
Alignment:
Q  18 atgtcttgttttgccgatttacatgatttcttacta 53  Q
    |||||||| |||||||||||||||||||||||||||    
T  16387213 atgtcttgatttgccgatttacatgatttcttacta 16387248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 22559176 - 22559250
Alignment:
Q  22 cttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaa 97  Q
    ||||||||  ||||||||||||||||| ||| ||||||| |||||||| |||| ||||| || |||||||| ||||    
T  22559176 cttgttttttcgatttacatgatttctcact-aaaagacccaaaacacctatgaagttgcatgatttgggaaaaaa 22559250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 22262448 - 22262359
Alignment:
Q  76 agttgaataatttgggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaat 165  Q
    ||||| ||||||| ||  |||| ||||| |||  |||||| ||||||| ||||||| |  || |||||||||||||||| ||||||||||    
T  22262448 agttgcataatttaggtcaaaagtgaatcacatcgactcggatgaaaataatacaatatttttctcaaaccattgacaactcctctaaat 22262359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 10505043 - 10505075
Alignment:
Q  17 gatgtcttgttttgccgatttacatgatttctt 49  Q
    ||||||||||||||||||||| |||||||||||    
T  10505043 gatgtcttgttttgccgatttgcatgatttctt 10505075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 15178164 - 15178100
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttg 80  Q
    |||||||||| ||| | |||| ||||||||||| |||||||  ||||||||||| |||| |||||    
T  15178164 tgatgtcttgatttactgattcacatgatttctcactaaaattactcaaaacacctatggagttg 15178100  T

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Target: scaffold0386 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 8667 - 8882
Alignment:
Q  18 atgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcga 116  Q
    |||||||| |||| |||||||||||||| || |||| |||| | |||||||| ||||| ||||| | ||||| |||||||| |||||||| |  | ||||    
T  8667 atgtcttgatttgtcgatttacatgattcctcactacaaaacattcaaaacatatatggagttgcacaatttaggataaaagtgaattactacaagtcga 8766  T
Q  117 atgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagctta 216  Q
     |||||||||||||| |   ||||| |||||||||||||||||||||   || | | ||||| ||| ||||| ||||||||  |||||||| ||| |  |    
T  8767 gtgaaaacaatacaatacaatcctctaaccattgacaaatcctctaaccctcatcttatttttcttaaaatgaaaataaaagtactaaaaaaataaccaa 8866  T
Q  217 aagtatcatatgatgt 232  Q
    || |||||||||||||    
T  8867 aaatatcatatgatgt 8882  T

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Target: scaffold0386; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 13017 - 13244
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatt 104  Q
    ||||||||  |||||||||| |||| |||||||||||||| || |||| |||| ||||||||||| | || ||||| ||||||| |||||||| ||||||    
T  13017 atccttcatgtgatgtcttgatttgtcgatttacatgattcctcactacaaaacactcaaaacacctgtggagttgcataatttaggataaaagtgaatt 13116  T
Q  105 acaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaa 204  Q
     |||  |||||  || ||| ||||||| |   ||| ||||||||||| ||||||||||| | || | | ||||  ||| | ||| ||||||||  |||||    
T  13117 ccaacaactcgtgtggaaagaatacaatataatccacaaaccattgaaaaatcctctaactctcatcttatttgtcttaatatgaaaataaaagtactaa 13216  T
Q  205 aaacatagcttaaagtatcatatgatgt 232  Q
    ||||||| || ||| |||||||| ||||    
T  13217 aaacataactaaaaatatcatataatgt 13244  T

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Target: scaffold0171 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 21554 - 21425
Alignment:
Q  18 atgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcga 116  Q
    |||||||| |||| |||||||||||||| || |||  |||| || |||||||  |||| ||||| || |||| |||||||| |||||||||| |||||||    
T  21554 atgtcttggtttgtcgatttacatgattcctcactgcaaaacacccaaaacaattatgaagttgcatgatttaggataaaagtgaattacaacgactcga 21455  T
Q  117 atgaaaacaatacaaaaagttcctcaaacc 146  Q
     |||||||||||||| ||||||||||||||    
T  21454 gtgaaaacaatacaataagttcctcaaacc 21425  T

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Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 6280 - 6219
Alignment:
Q  90 ggataaaactgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattga 151  Q
    |||||||| | ||||||||||||| || |||||| ||||||  | |||||||||||||||||    
T  6280 ggataaaagtaaattacaatgacttgagtgaaaataatacattatgttcctcaaaccattga 6219  T

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Target: scaffold0171; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 6364 - 6324
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgattt 46  Q
    ||||||||| |||||||||| |||| |||||||||||||||    
T  6364 atccttcacgtgatgtcttgatttgtcgatttacatgattt 6324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 232
Target Start/End: Complemental strand, 1593 - 1386
Alignment:
Q  24 tgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactcgaatgaaaa 123  Q
    |||||| |||||||||||||||| | |  |||||||||| |||||  | |  ||||| || |||   ||||||| ||||||| ||||| |||||||||||    
T  1593 tgtttttccgatttacatgatttttcataaaaaagactcgaaacatcttttgagttgcatgattaatgataaaagtgaattaaaatgaatcgaatgaaaa 1494  T
Q  124 caatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaataactaaaaacatagcttaaagtatc 223  Q
    |||||||||| | ||||||||  |||||||| ||||||||||  | | | ||||||||| | ||| ||| |||||||||  |||||||||  ||| ||||    
T  1493 caatacaaaatgctcctcaaaatattgacaactcctctaaatgacctcttattttccttaagatgaaaagaaaataact-caaacatagcaaaaaatatc 1395  T
Q  224 atatgatgt 232  Q
    |||||||||    
T  1394 atatgatgt 1386  T

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Target: scaffold0337 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 1741 - 1626
Alignment:
Q  99 tgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaat 198  Q
    ||||||| || ||| |||||||||||||||||||||||||||||||| |||||||| ||||||||    ||| |||||| |||| ||||||||||||       
T  1741 tgaattaaaacgacacgaatgaaaacaatacaaaaagttcctcaaactattgacaattcctctaatagacttctaatttaccttcaaatgcaaataatta 1642  T
Q  199 aactaaaaacatagct 214  Q
     |||||||||||||||    
T  1641 cactaaaaacatagct 1626  T

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Target: scaffold0065 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 12177 - 12062
Alignment:
Q  99 tgaattacaatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaataaaat 198  Q
    ||||||| || ||| |||||||||||||||||||||||||||||||| |||||||| ||||||||    ||| |||||| |||| ||||||||||||       
T  12177 tgaattaaaacgacacgaatgaaaacaatacaaaaagttcctcaaactattgacaattcctctaatagacttctaatttaccttcaaatgcaaataatta 12078  T
Q  199 aactaaaaacatagct 214  Q
     |||||||||||||||    
T  12077 cactaaaaacatagct 12062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 12413 - 12338
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttg 80  Q
    ||||||||| |||||||||| |||| ||||||||||||||||| |||| |||| ||||||||||| |||| |||||    
T  12413 atccttcacgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacactcaaaacacctatggagttg 12338  T

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Target: scaffold1149 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 1943 - 1767
Alignment:
Q  16 tgatgtcttgttttgccgatttacatgatttcttacta-aaaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaatgactc 114  Q
    |||| ||||||||||  |||||||||||||||| | || |||| || |||||||||  || ||||| || |||   ||||||  |||||||||| | |||    
T  1943 tgatatcttgttttgatgatttacatgatttctaattacaaaacacccaaaacacaagtgaagttgcatgattaaagataaag-tgaattacaacggctc 1845  T
Q  115 gaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaatatcttttaattttcctttaaatgcaaa 192  Q
    ||| ||||||||||||||| |||| |||||||| ||||||||||| ||| |  ||| |||| |||||| |||||||||    
T  1844 gaacgaaaacaatacaaaaggttcttcaaaccaatgacaaatcctataattgacttctaatattccttcaaatgcaaa 1767  T

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Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 228132 - 228288
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||| |||||||||| |||| ||||||||||||||||| |||| ||| ||  | ||||| | |   |||| || ||||  ||||||| |||||||    
T  228132 atccttcacgtgatgtcttgatttgtcgatttacatgatttctcactataaa-acatacaacacttttagggttgcatgatttatgataaaaatgaatta 228230  T
Q  106 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaa 163  Q
    ||| ||||||||||||||||||  |||| ||||| |||| || ||| || ||||||||    
T  228231 caacgactcgaatgaaaacaatttaaaatgttccacaaatcaatgaaaactcctctaa 228288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 26905 - 27009
Alignment:
Q  10 ttcacatgatgtcttgttttgccgatttacatgatttcttactaa-aaagactcaaaacacatatgcagttgaataatttgggataaaactgaattacaa 108  Q
    ||||| |||||||||  |||| ||||||||||||||||| ||||  ||| ||||||||||| |||| ||||| || |||| |||||||| | ||||||||    
T  26905 ttcacgtgatgtcttaatttgtcgatttacatgatttctcactactaaacactcaaaacacctatgtagttgtatgatttaggataaaagtaaattacaa 27004  T
Q  109 tgact 113  Q
    |||||    
T  27005 tgact 27009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 47767 - 47869
Alignment:
Q  6 atccttcacatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 105  Q
    ||||||||  || ||||||||||||| || |||||| |||   || |||||||| ||||||||| |||| |||||||||||||||||  ||| |||||||    
T  47767 atccttcatgtggtgtcttgttttgcggaattacataattaaataataaaaagaatcaaaacacgtatgaagttgaataatttgggaataaattgaatta 47866  T
Q  106 caa 108  Q
    |||    
T  47867 caa 47869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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