View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11812_high_4 (Length: 322)
Name: NF11812_high_4
Description: NF11812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11812_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 22 - 304
Target Start/End: Original strand, 35909265 - 35909546
Alignment:
| Q |
22 |
agcaaaggtcccaattatgtggcggttacacccaaactagaatgtgtgaattatttagcatggacttgtgccatgtgttgatacatgctatataaagcat |
121 |
Q |
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| T |
35909265 |
agcaaaggtcccaaatatgtggcggttacacccaaactagaatgtgtgaattatttagcatggacttgtgccatgtgttgatacatgctatataaagcat |
35909364 |
T |
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| Q |
122 |
aattatctaaatggcaatgtgacaggttatgtcaaagagtcacaaatatctcaatctcatttagaaccattgtttattcaagagcagtttgacagtcttg |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35909365 |
aattatctaaatggcaatgtgacaggttatgtcaaagagtcacaaatatctcaatctcatttagaaccattgtttattcaagagcagtttgacagtcttg |
35909464 |
T |
|
| Q |
222 |
tagccttggtccctctattctgataaggtgcctcaacatcaaaccaatcatgttagctccaaagctcattttggtcataaaac |
304 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
35909465 |
tagccttggtccctctattctgataaggtgcctcaacatcaaaccaatcatg-tagctccaaagctcattttggtcataaaac |
35909546 |
T |
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