View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11813_high_31 (Length: 317)
Name: NF11813_high_31
Description: NF11813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11813_high_31 |
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Alignment Details
Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 14 - 295
Target Start/End: Original strand, 46082046 - 46082326
Alignment:
| Q |
14 |
ggacatcatgtggagccggattaagtaggtgcgcgtgtcaaggagtaagtggaaaaacgcgttttgggtaatgtgtgttgccctaatcgtatgcttgctc |
113 |
Q |
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| T |
46082046 |
ggacattatgtggagccggattaagtaggtgcgcgtgtcaaggagtaagtggaaaa-cgcgttttgggtaatgtgtgttgccctaatcgtatgcttgctc |
46082144 |
T |
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| Q |
114 |
gctcgcaacaacaagaattggttctcttatccatcttgtaagtaagtgaataaaccattctcttctccattaatttatatatcaacccaacccaacccaa |
213 |
Q |
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| T |
46082145 |
gctcgcaacaacaagaattggttctcttatccatcttgtaagtaagtgaataaaccattctcttctccattaatttatatatcaacccaacccaacccaa |
46082244 |
T |
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| Q |
214 |
ccatgtcttcaccctctgcgcctcctccttcattgtcttcgtcttcacgcatctcaattcttcttcatttcaatcggtaatt |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
46082245 |
ccatgtcttcaccctctgcgcctcctccttcattgtcttcgtcttcaagcatctcaattcttcttcatttcaatcggtaatt |
46082326 |
T |
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