View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11813_low_25 (Length: 400)

Name: NF11813_low_25
Description: NF11813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11813_low_25
NF11813_low_25
[»] chr5 (59 HSPs)
chr5 (8-386)||(6223926-6224304)
chr5 (3-126)||(26074602-26074725)
chr5 (8-127)||(299478-299597)
chr5 (15-126)||(26075219-26075330)
chr5 (8-123)||(36568617-36568732)
chr5 (3-126)||(40296360-40296483)
chr5 (8-114)||(18603170-18603276)
chr5 (8-123)||(1028567-1028682)
chr5 (8-123)||(13415810-13415925)
chr5 (3-126)||(15370089-15370212)
chr5 (7-114)||(32487396-32487502)
chr5 (8-110)||(41170640-41170742)
chr5 (3-123)||(26074191-26074311)
chr5 (3-114)||(624198-624309)
chr5 (3-126)||(25327925-25328048)
chr5 (15-126)||(26074839-26074950)
chr5 (8-127)||(34753075-34753194)
chr5 (3-126)||(35167883-35168006)
chr5 (3-126)||(36492262-36492385)
chr5 (3-126)||(42405641-42405764)
chr5 (3-121)||(35150002-35150119)
chr5 (3-120)||(3295060-3295176)
chr5 (6-126)||(11417025-11417143)
chr5 (3-114)||(6500453-6500563)
chr5 (3-114)||(27502081-27502192)
chr5 (3-129)||(3295390-3295514)
chr5 (8-126)||(12662702-12662820)
chr5 (3-123)||(41632775-41632895)
chr5 (3-110)||(9498699-9498806)
chr5 (3-114)||(6500825-6500935)
chr5 (18-124)||(42508604-42508710)
chr5 (8-123)||(24489256-24489369)
chr5 (35-127)||(35914838-35914930)
chr5 (3-114)||(623820-623931)
chr5 (8-91)||(15370427-15370510)
chr5 (8-114)||(29549305-29549411)
chr5 (35-123)||(39309677-39309764)
chr5 (51-126)||(300949-301024)
chr5 (36-114)||(26074320-26074398)
chr5 (3-104)||(33747783-33747884)
chr5 (9-126)||(41635242-41635359)
chr5 (7-111)||(38427553-38427656)
chr5 (8-123)||(36521946-36522061)
chr5 (41-114)||(7768852-7768925)
chr5 (20-124)||(31509615-31509719)
chr5 (3-123)||(13786046-13786166)
chr5 (9-113)||(2411010-2411114)
chr5 (74-126)||(35150737-35150789)
chr5 (74-126)||(35151028-35151080)
chr5 (51-114)||(5723884-5723947)
chr5 (8-79)||(26590960-26591031)
chr5 (56-113)||(6225047-6225104)
chr5 (70-126)||(26900082-26900138)
chr5 (3-113)||(36522282-36522392)
chr5 (18-116)||(42524717-42524814)
chr5 (92-124)||(36527217-36527249)
chr5 (3-49)||(13042321-13042367)
chr5 (3-49)||(13042606-13042652)
chr5 (3-49)||(13112315-13112361)
[»] chr7 (50 HSPs)
chr7 (3-128)||(7517568-7517693)
chr7 (3-126)||(30244260-30244383)
chr7 (3-126)||(30245067-30245190)
chr7 (3-126)||(7554015-7554138)
chr7 (8-126)||(1085666-1085784)
chr7 (8-126)||(22566712-22566830)
chr7 (3-126)||(45434626-45434749)
chr7 (3-126)||(45754706-45754828)
chr7 (3-129)||(22567084-22567209)
chr7 (8-126)||(24177425-24177543)
chr7 (8-126)||(40094824-40094942)
chr7 (3-128)||(45433229-45433354)
chr7 (3-127)||(23422-23546)
chr7 (10-126)||(16569186-16569302)
chr7 (10-126)||(16596360-16596476)
chr7 (3-114)||(29157567-29157678)
chr7 (3-126)||(47129085-47129208)
chr7 (3-126)||(34218079-34218202)
chr7 (3-121)||(6054555-6054673)
chr7 (7-128)||(30032555-30032676)
chr7 (3-126)||(11845183-11845304)
chr7 (15-114)||(37533067-37533166)
chr7 (18-129)||(41910654-41910765)
chr7 (8-126)||(36534834-36534952)
chr7 (8-125)||(36939783-36939900)
chr7 (3-123)||(8128486-8128606)
chr7 (7-126)||(24838750-24838870)
chr7 (3-114)||(14681512-14681623)
chr7 (8-126)||(118351-118469)
chr7 (3-113)||(37533409-37533519)
chr7 (3-108)||(19122740-19122844)
chr7 (51-126)||(30245484-30245559)
chr7 (51-126)||(30255329-30255404)
chr7 (3-126)||(43241485-43241608)
chr7 (15-121)||(40230348-40230454)
chr7 (46-126)||(30244691-30244771)
chr7 (11-127)||(36622949-36623065)
chr7 (7-127)||(41854624-41854743)
chr7 (8-126)||(1085298-1085417)
chr7 (28-123)||(28301613-28301708)
chr7 (51-125)||(36109010-36109084)
chr7 (11-111)||(44361517-44361616)
chr7 (3-126)||(9901635-9901756)
chr7 (12-126)||(20599304-20599418)
chr7 (64-128)||(36967335-36967399)
chr7 (3-74)||(30253534-30253605)
chr7 (66-123)||(40094502-40094559)
chr7 (3-47)||(23569047-23569091)
chr7 (8-70)||(28300303-28300366)
chr7 (3-49)||(21416186-21416232)
[»] chr2 (64 HSPs)
chr2 (8-126)||(15880253-15880371)
chr2 (3-126)||(6421375-6421498)
chr2 (3-114)||(36178650-36178761)
chr2 (8-114)||(14745717-14745823)
chr2 (8-114)||(37106190-37106296)
chr2 (3-126)||(6712966-6713090)
chr2 (3-114)||(5542670-5542781)
chr2 (8-114)||(41283525-41283631)
chr2 (3-123)||(962591-962711)
chr2 (3-127)||(28254282-28254406)
chr2 (11-126)||(38796673-38796788)
chr2 (8-123)||(42514642-42514757)
chr2 (8-126)||(36005930-36006047)
chr2 (8-123)||(5367448-5367563)
chr2 (3-114)||(5543043-5543154)
chr2 (8-123)||(28531364-28531479)
chr2 (8-126)||(31259666-31259787)
chr2 (3-114)||(37105926-37106037)
chr2 (8-123)||(40679679-40679794)
chr2 (3-126)||(40733507-40733630)
chr2 (9-114)||(36178320-36178425)
chr2 (3-126)||(15511540-15511661)
chr2 (5-126)||(31468797-31468914)
chr2 (10-121)||(35580776-35580886)
chr2 (11-126)||(33731636-33731753)
chr2 (9-126)||(16542439-16542556)
chr2 (38-126)||(38796298-38796386)
chr2 (28-127)||(31899496-31899595)
chr2 (8-123)||(37632647-37632762)
chr2 (8-110)||(14745344-14745446)
chr2 (3-100)||(6422126-6422223)
chr2 (3-126)||(29676893-29677021)
chr2 (3-119)||(7598606-7598714)
chr2 (3-126)||(40733873-40733995)
chr2 (8-98)||(36178221-36178311)
chr2 (39-119)||(1769889-1769969)
chr2 (3-123)||(23346228-23346349)
chr2 (59-126)||(36785664-36785731)
chr2 (6-123)||(33561499-33561616)
chr2 (8-120)||(29874073-29874185)
chr2 (8-124)||(37895111-37895227)
chr2 (38-105)||(40163453-40163520)
chr2 (68-126)||(6421294-6421352)
chr2 (13-119)||(7598225-7598331)
chr2 (21-125)||(12529091-12529195)
chr2 (8-124)||(30313170-30313285)
chr2 (8-124)||(30323456-30323572)
chr2 (2-123)||(33953815-33953936)
chr2 (8-121)||(37894742-37894855)
chr2 (21-123)||(16590881-16590978)
chr2 (29-108)||(29676543-29676622)
chr2 (9-123)||(9231242-9231356)
chr2 (9-123)||(12910221-12910335)
chr2 (11-100)||(28254165-28254254)
chr2 (7-124)||(29873586-29873703)
chr2 (81-126)||(3673075-3673120)
chr2 (21-74)||(31385779-31385832)
chr2 (54-123)||(42515005-42515078)
chr2 (3-54)||(6421793-6421844)
chr2 (8-74)||(30312831-30312897)
chr2 (21-63)||(36784323-36784365)
chr2 (81-126)||(3672709-3672754)
chr2 (9-123)||(41678419-41678534)
chr2 (94-126)||(40734268-40734300)
[»] chr1 (60 HSPs)
chr1 (3-124)||(17294569-17294690)
chr1 (3-126)||(26661567-26661690)
chr1 (3-126)||(34364497-34364620)
chr1 (3-126)||(34364915-34365038)
chr1 (3-127)||(26661943-26662067)
chr1 (15-127)||(41142361-41142473)
chr1 (3-124)||(41157367-41157488)
chr1 (3-126)||(37556101-37556224)
chr1 (3-126)||(41156981-41157104)
chr1 (11-114)||(44290511-44290614)
chr1 (15-114)||(44290882-44290981)
chr1 (9-130)||(38804406-38804527)
chr1 (22-126)||(41184489-41184593)
chr1 (3-114)||(3550722-3550833)
chr1 (3-126)||(11977270-11977393)
chr1 (8-123)||(22077545-22077660)
chr1 (7-126)||(31767210-31767329)
chr1 (3-114)||(41759485-41759596)
chr1 (3-108)||(14318875-14318980)
chr1 (10-126)||(34649428-34649544)
chr1 (3-126)||(29798189-29798312)
chr1 (3-114)||(32594761-32594872)
chr1 (8-124)||(3875381-3875497)
chr1 (8-111)||(3537649-3537752)
chr1 (9-124)||(5320016-5320131)
chr1 (3-126)||(39066245-39066368)
chr1 (8-110)||(5575110-5575212)
chr1 (3-113)||(50052068-50052178)
chr1 (11-124)||(66525-66638)
chr1 (37-114)||(3537226-3537303)
chr1 (8-125)||(40082398-40082514)
chr1 (10-114)||(48588540-48588644)
chr1 (3-112)||(9955911-9956022)
chr1 (8-123)||(66137-66254)
chr1 (38-126)||(37850680-37850768)
chr1 (41-120)||(45084378-45084457)
chr1 (3-125)||(37555721-37555842)
chr1 (3-123)||(24600359-24600479)
chr1 (35-126)||(21378118-21378209)
chr1 (3-114)||(45494019-45494135)
chr1 (3-79)||(44043817-44043893)
chr1 (22-123)||(44685449-44685551)
chr1 (22-123)||(24132049-24132150)
chr1 (10-123)||(30630690-30630803)
chr1 (69-129)||(35154150-35154210)
chr1 (3-126)||(45839617-45839744)
chr1 (15-106)||(5528811-5528902)
chr1 (8-123)||(19283505-19283620)
chr1 (7-90)||(22077159-22077242)
chr1 (7-124)||(22793270-22793388)
chr1 (8-121)||(22077879-22077991)
chr1 (8-114)||(32168748-32168843)
chr1 (8-123)||(1188638-1188753)
chr1 (57-123)||(50469180-50469246)
chr1 (48-116)||(4266872-4266940)
chr1 (7-89)||(4956218-4956300)
chr1 (55-123)||(4878796-4878864)
chr1 (7-121)||(1187413-1187527)
chr1 (8-53)||(31877262-31877307)
chr1 (22-67)||(41184152-41184197)
[»] scaffold0702 (2 HSPs)
scaffold0702 (3-126)||(559-682)
scaffold0702 (46-114)||(230-298)
[»] chr6 (43 HSPs)
chr6 (3-126)||(2377744-2377867)
chr6 (3-126)||(2578488-2578610)
chr6 (3-126)||(2579917-2580040)
chr6 (3-126)||(16107668-16107791)
chr6 (3-114)||(26544051-26544162)
chr6 (3-114)||(29518505-29518616)
chr6 (3-114)||(29518922-29519033)
chr6 (3-114)||(32741181-32741292)
chr6 (8-126)||(16454897-16455015)
chr6 (8-128)||(16454563-16454683)
chr6 (3-114)||(2378128-2378239)
chr6 (3-114)||(3409261-3409372)
chr6 (7-126)||(32460629-32460748)
chr6 (8-114)||(35210206-35210312)
chr6 (3-112)||(3415462-3415571)
chr6 (25-126)||(16108053-16108154)
chr6 (3-123)||(10074408-10074528)
chr6 (3-114)||(3058228-3058339)
chr6 (8-114)||(14748388-14748494)
chr6 (3-123)||(10074036-10074156)
chr6 (7-126)||(1950234-1950353)
chr6 (3-126)||(5832072-5832194)
chr6 (8-114)||(593759-593865)
chr6 (8-110)||(1127366-1127468)
chr6 (8-128)||(6999846-6999966)
chr6 (3-114)||(1846750-1846861)
chr6 (8-126)||(2843544-2843663)
chr6 (3-123)||(10073661-10073779)
chr6 (3-114)||(3409662-3409773)
chr6 (56-126)||(2579203-2579273)
chr6 (8-126)||(9062400-9062517)
chr6 (3-123)||(10911558-10911679)
chr6 (3-123)||(2578880-2578999)
chr6 (15-111)||(2579549-2579645)
chr6 (8-124)||(6071124-6071240)
chr6 (3-124)||(8481919-8482039)
chr6 (3-126)||(5958648-5958771)
chr6 (3-123)||(12092527-12092647)
chr6 (3-101)||(2975567-2975665)
chr6 (38-79)||(14789284-14789325)
chr6 (43-96)||(35210498-35210551)
chr6 (92-124)||(7588358-7588390)
chr6 (8-48)||(22605305-22605345)
[»] chr8 (68 HSPs)
chr8 (3-126)||(30359261-30359384)
chr8 (8-126)||(3038340-3038458)
chr8 (3-126)||(34834866-34834989)
chr8 (8-123)||(9608738-9608853)
chr8 (7-126)||(25561864-25561984)
chr8 (3-127)||(30359598-30359722)
chr8 (7-126)||(70323-70441)
chr8 (3-126)||(9309345-9309468)
chr8 (3-130)||(33113412-33113539)
chr8 (3-126)||(34835199-34835322)
chr8 (8-126)||(147441-147559)
chr8 (8-121)||(1513965-1514078)
chr8 (3-114)||(3669689-3669800)
chr8 (3-126)||(34835464-34835588)
chr8 (3-126)||(34835730-34835854)
chr8 (6-126)||(45121704-45121823)
chr8 (3-114)||(3670062-3670173)
chr8 (8-126)||(6876912-6877031)
chr8 (7-126)||(8918813-8918932)
chr8 (7-121)||(40518577-40518691)
chr8 (3-121)||(45122102-45122220)
chr8 (7-124)||(5420643-5420760)
chr8 (3-128)||(37544535-37544660)
chr8 (8-126)||(9482654-9482770)
chr8 (3-90)||(9483232-9483319)
chr8 (3-114)||(30441083-30441198)
chr8 (2-126)||(43274823-43274947)
chr8 (8-124)||(40518061-40518179)
chr8 (12-126)||(45122996-45123108)
chr8 (21-123)||(41972151-41972253)
chr8 (8-114)||(45121960-45122066)
chr8 (38-126)||(8794101-8794189)
chr8 (3-114)||(1013916-1014027)
chr8 (11-123)||(9308970-9309084)
chr8 (8-79)||(9609122-9609193)
chr8 (28-109)||(41416241-41416322)
chr8 (12-126)||(18372988-18373098)
chr8 (11-111)||(20130454-20130553)
chr8 (3-114)||(1014290-1014401)
chr8 (3-114)||(40579551-40579662)
chr8 (8-106)||(18372044-18372142)
chr8 (3-114)||(20870618-20870731)
chr8 (8-90)||(45122650-45122732)
chr8 (44-113)||(18372342-18372411)
chr8 (44-113)||(18372785-18372854)
chr8 (8-124)||(9507769-9507890)
chr8 (8-109)||(18371711-18371807)
chr8 (8-118)||(18372656-18372762)
chr8 (8-112)||(18380067-18380171)
chr8 (9-113)||(32640583-32640682)
chr8 (8-123)||(4154716-4154831)
chr8 (51-106)||(25561737-25561792)
chr8 (8-91)||(32305502-32305585)
chr8 (3-126)||(147819-147933)
chr8 (3-124)||(4154326-4154446)
chr8 (3-125)||(5915863-5915980)
chr8 (9-122)||(12283867-12283979)
chr8 (26-113)||(3037776-3037865)
chr8 (67-114)||(6731906-6731953)
chr8 (21-123)||(9620739-9620841)
chr8 (39-123)||(33831971-33832055)
chr8 (3-121)||(5274770-5274888)
chr8 (72-113)||(18372485-18372526)
chr8 (51-112)||(43398164-43398225)
chr8 (59-123)||(20995502-20995566)
chr8 (24-79)||(18373236-18373291)
chr8 (67-109)||(6651510-6651552)
chr8 (4-45)||(12156704-12156745)
[»] chr3 (64 HSPs)
chr3 (7-126)||(52634666-52634784)
chr3 (3-123)||(35946515-35946635)
chr3 (3-126)||(37991022-37991145)
chr3 (3-126)||(43346836-43346959)
chr3 (8-126)||(29644952-29645070)
chr3 (3-124)||(54017861-54017982)
chr3 (7-127)||(42342437-42342557)
chr3 (8-127)||(29644631-29644750)
chr3 (3-126)||(37990684-37990807)
chr3 (3-126)||(32462945-32463069)
chr3 (3-126)||(45901703-45901827)
chr3 (3-127)||(54018243-54018367)
chr3 (3-126)||(12114607-12114730)
chr3 (3-126)||(15772844-15772967)
chr3 (3-126)||(15773182-15773305)
chr3 (3-114)||(22304571-22304682)
chr3 (8-126)||(32462608-32462727)
chr3 (3-126)||(32589694-32589816)
chr3 (8-123)||(33803302-33803417)
chr3 (3-107)||(39935000-39935104)
chr3 (7-126)||(25739474-25739593)
chr3 (3-114)||(39389072-39389183)
chr3 (3-126)||(49336732-49336855)
chr3 (10-123)||(21832395-21832508)
chr3 (3-123)||(8327897-8328017)
chr3 (3-127)||(31190006-31190122)
chr3 (3-128)||(3135499-3135631)
chr3 (8-126)||(41359815-41359929)
chr3 (3-124)||(45395698-45395819)
chr3 (8-123)||(33175711-33175829)
chr3 (35-126)||(25755384-25755475)
chr3 (9-128)||(53118026-53118144)
chr3 (3-124)||(3135118-3135237)
chr3 (3-127)||(22304000-22304117)
chr3 (8-126)||(42342140-42342258)
chr3 (10-126)||(1634366-1634483)
chr3 (3-114)||(4823657-4823768)
chr3 (3-126)||(39914242-39914365)
chr3 (3-126)||(53577354-53577477)
chr3 (40-114)||(50612534-50612608)
chr3 (10-126)||(11661941-11662058)
chr3 (14-122)||(33362349-33362460)
chr3 (51-126)||(11661525-11661600)
chr3 (3-106)||(42584867-42584970)
chr3 (60-126)||(43346640-43346706)
chr3 (26-123)||(9240142-9240239)
chr3 (8-123)||(47964568-47964683)
chr3 (39-114)||(51886563-51886638)
chr3 (24-113)||(7767380-7767469)
chr3 (61-114)||(22304248-22304301)
chr3 (8-124)||(44160595-44160710)
chr3 (51-114)||(37726506-37726569)
chr3 (4-123)||(46546371-46546490)
chr3 (9-119)||(3384317-3384427)
chr3 (21-121)||(39336292-39336392)
chr3 (8-58)||(22303709-22303759)
chr3 (8-74)||(12749211-12749277)
chr3 (8-66)||(52634990-52635048)
chr3 (84-124)||(12747878-12747918)
chr3 (8-123)||(47964965-47965080)
chr3 (3-46)||(54017593-54017636)
chr3 (84-124)||(2299968-2300008)
chr3 (8-48)||(17731954-17731994)
chr3 (8-48)||(19033185-19033225)
[»] chr4 (77 HSPs)
chr4 (3-119)||(54017638-54017754)
chr4 (3-127)||(10245909-10246032)
chr4 (3-126)||(25483326-25483449)
chr4 (3-126)||(34646692-34646815)
chr4 (11-126)||(36572009-36572124)
chr4 (3-126)||(39404388-39404511)
chr4 (3-123)||(52884688-52884809)
chr4 (21-126)||(52884877-52884982)
chr4 (8-126)||(4955365-4955483)
chr4 (3-124)||(41707508-41707628)
chr4 (3-123)||(36629230-36629350)
chr4 (3-127)||(50002415-50002539)
chr4 (3-128)||(54936188-54936309)
chr4 (8-123)||(2740693-2740808)
chr4 (8-123)||(20825829-20825944)
chr4 (8-127)||(22183312-22183431)
chr4 (3-126)||(36608704-36608827)
chr4 (3-114)||(50630798-50630909)
chr4 (3-114)||(55933167-55933278)
chr4 (8-126)||(1731695-1731813)
chr4 (3-121)||(3340802-3340920)
chr4 (3-126)||(22028004-22028127)
chr4 (3-114)||(49880162-49880273)
chr4 (8-121)||(39404013-39404126)
chr4 (9-114)||(41370359-41370464)
chr4 (3-123)||(54108908-54109025)
chr4 (3-123)||(20826210-20826330)
chr4 (3-123)||(39792903-39793023)
chr4 (8-123)||(2741064-2741179)
chr4 (3-126)||(3341118-3341241)
chr4 (4-107)||(44620362-44620465)
chr4 (8-122)||(44620654-44620767)
chr4 (8-126)||(54017750-54017870)
chr4 (3-126)||(16888859-16888983)
chr4 (22-126)||(49076510-49076614)
chr4 (8-113)||(49302907-49303014)
chr4 (8-123)||(3244499-3244614)
chr4 (7-126)||(4390148-4390267)
chr4 (8-126)||(43174496-43174615)
chr4 (3-126)||(45489375-45489497)
chr4 (3-126)||(50459711-50459834)
chr4 (3-90)||(18932792-18932879)
chr4 (3-101)||(45496820-45496918)
chr4 (9-123)||(54741227-54741341)
chr4 (27-123)||(10246340-10246436)
chr4 (7-123)||(32941170-32941286)
chr4 (51-127)||(44620285-44620361)
chr4 (53-124)||(3700357-3700428)
chr4 (8-107)||(44621011-44621110)
chr4 (3-122)||(49076874-49076992)
chr4 (3-126)||(22028412-22028537)
chr4 (3-106)||(54343051-54343147)
chr4 (15-125)||(51768115-51768225)
chr4 (8-121)||(34004633-34004744)
chr4 (11-126)||(16889587-16889703)
chr4 (51-126)||(44620934-44621010)
chr4 (8-123)||(28034222-28034337)
chr4 (51-122)||(44621420-44621491)
chr4 (8-110)||(6975504-6975606)
chr4 (3-126)||(54108527-54108650)
chr4 (3-118)||(40067041-40067157)
chr4 (3-95)||(48111741-48111833)
chr4 (7-70)||(18879852-18879915)
chr4 (64-126)||(19504695-19504757)
chr4 (8-65)||(31691203-31691260)
chr4 (64-114)||(50788087-50788137)
chr4 (3-111)||(760194-760301)
chr4 (68-124)||(45050593-45050649)
chr4 (3-74)||(15841411-15841482)
chr4 (8-62)||(3271841-3271895)
chr4 (38-116)||(45489792-45489870)
chr4 (42-126)||(11348410-11348494)
chr4 (75-126)||(11706636-11706687)
chr4 (3-62)||(23817724-23817783)
chr4 (8-74)||(34544148-34544215)
chr4 (3-49)||(11197293-11197339)
chr4 (9-122)||(15841034-15841146)
[»] scaffold0391 (3 HSPs)
scaffold0391 (11-127)||(1159-1275)
scaffold0391 (3-69)||(1736-1802)
scaffold0391 (65-126)||(3092-3153)
[»] scaffold0078 (2 HSPs)
scaffold0078 (3-124)||(5349-5470)
scaffold0078 (3-126)||(4972-5095)
[»] scaffold0734 (2 HSPs)
scaffold0734 (26-126)||(5767-5867)
scaffold0734 (3-135)||(5377-5510)
[»] scaffold0171 (1 HSPs)
scaffold0171 (20-126)||(17518-17624)
[»] scaffold0504 (1 HSPs)
scaffold0504 (39-127)||(10192-10280)
[»] scaffold0027 (1 HSPs)
scaffold0027 (15-126)||(47350-47461)
[»] scaffold0113 (1 HSPs)
scaffold0113 (84-124)||(39830-39870)


Alignment Details
Target: chr5 (Bit Score: 347; Significance: 0; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 8 - 386
Target Start/End: Complemental strand, 6224304 - 6223926
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6224304 cacactcttaccaaaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactc 6224205  T
Q  108 acacttgtacacaacaacataaagcacccactaaatgtgcatcaaaatctttctgctaaagccagcccgcaatactgttaagcaaagtacagtgtactaa 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6224204 acacttgtacacaacaacataaagcacccactaaatgtgcatcaaaatctttctgctaaagccaacccgcaatactgttaagcaaagtacagtgtactaa 6224105  T
Q  208 aatgtacacacattacagcatacttttttagctgggatatcaacaaatttctgaccacctctcacatatgatatacttcaacaggatgttcagttatacc 307  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6224104 aatgtacacgcattacagcatacttttttagctgagatatcaacaaatttctgaccacctctcacatatgatatacttcaataggatgttcagttatacc 6224005  T
Q  308 tatagctgccaaattcaaaacattaaaataagctagattattgatacaaaattacaaatacacctctgtggtgatattt 386  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6224004 tatagctgccaaattcaaaacattaaaataagctacattattgatacaaaattacaaatacacctctgtggtgatattt 6223926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 26074725 - 26074602
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||| ||||||    
T  26074725 gacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatatggaacatat 26074626  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||| ||||    
T  26074625 aactcacacttgtacacaaaaaca 26074602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 299597 - 299478
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  299597 cacactcttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactc 299498  T
Q  108 acacttgtacacaacaacat 127  Q
    |||||||  |||||||||||    
T  299497 acacttgcgcacaacaacat 299478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 26075219 - 26075330
Alignment:
Q  15 ttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  26075219 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgagacatataaatcacacttg 26075318  T
Q  115 tacacaacaaca 126  Q
    ||||||||||||    
T  26075319 tacacaacaaca 26075330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 36568617 - 36568732
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||||| || ||||||| ||||||||||||||||    
T  36568617 cacactcttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggtgttcaacttttacttttctatccgatgtgggacatataactc 36568716  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  36568717 acacttgcacacaaca 36568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 40296360 - 40296483
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||| || |||||||||| |||||||||||    
T  40296360 gacaccacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttctattttatccgatgtgggacatat 40296459  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| ||||| |||||    
T  40296460 aactcacacttgcacacaccaaca 40296483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 18603170 - 18603276
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  18603170 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactc 18603269  T
Q  108 acacttg 114  Q
    |||||||    
T  18603270 acacttg 18603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 1028567 - 1028682
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||||||||||||||||  || |||||||||||| |||||||||||| ||||||| |||||||| || ||||||| ||||||||||||||||    
T  1028567 cacactcttaccaaaaaccttaaggttataggtttatgggtcctcttacttataaagtgttcatcctttacttttctatccgatgtgggacatataactc 1028666  T
Q  108 acacttgtacacaaca 123  Q
    ||||||||||||||||    
T  1028667 acacttgtacacaaca 1028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 13415810 - 13415925
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||  || |||||||||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  13415810 cacactcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaacctttactaatttatccgatgtgggacatataactc 13415909  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  13415910 acacttgcacacaaca 13415925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 15370212 - 15370089
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||||||  ||| |||||||||| ||||||||||||| ||||||||||||||| |||||| ||| |||||||||||    
T  15370212 gacaccacactcttacccaaaaccttaaggctgtggatttatgggtcctcttacttataagatgttcaacctttactattttattcgatgtgggacatat 15370113  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  15370112 aactcacacttgcacacaacaaca 15370089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 32487502 - 32487396
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||    
T  32487502 tcacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata-ggtgttcaacctttactattttatccgatgtgggacatataact 32487404  T
Q  107 cacacttg 114  Q
    ||||||||    
T  32487403 cacacttg 32487396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 41170742 - 41170640
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||    
T  41170742 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactc 41170643  T
Q  108 aca 110  Q
    |||    
T  41170642 aca 41170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 26074191 - 26074311
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||| ||||||| |||||| ||| |||||||||||||||||| |||||||||| ||| |||||||    
T  26074191 gacaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacctttacttttttatccgatgtgtgacatat 26074290  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||||||||||| ||||||||    
T  26074291 aactcacacttgcacacaaca 26074311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 624309 - 624198
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| | | |||||||||||    
T  624309 gacaccacactcttacccaaaacctcaaggctatgggtttatgggtcatcttacttataacgtgttcaacctttactattttatacaatgtgggacatat 624210  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  624209 aactcacacttg 624198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 25328048 - 25327925
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||||||  | |||||||||||| |||||||||||||||||||||| |||||| |||||||||| || ||||||||    
T  25328048 gacaccacactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacttttactgttttatccgatgtaggacatat 25327949  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||  |||||||||||    
T  25327948 aactcacacttagacacaacaaca 25327925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 26074839 - 26074950
Alignment:
Q  15 ttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||| ||||||||||| | || |||||||||||| || ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26074839 ttacccaaaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtgggacatataactcacacttg 26074938  T
Q  115 tacacaacaaca 126  Q
    ||||||||||||    
T  26074939 tacacaacaaca 26074950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 34753075 - 34753194
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| || |||||||||||| |||||||||||||||||||||| |||||| || ||||| | |||||||||||||||     
T  34753075 cacactcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggtgttcaacttttacttttctatccaatgtgggacatataactt 34753174  T
Q  108 acacttgtacacaacaacat 127  Q
    ||| ||||||||||||||||    
T  34753175 acatttgtacacaacaacat 34753194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 35167883 - 35168006
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||||||||||||||||||| | ||||| || | ||||||||||||| |||||||||||||||||||||||||||||||||| || ||| || | ||    
T  35167883 gacatcacactcttaccaaaaacatcaaggcaatagatttatgggtcatcctacttataaggtgttcaacctttactcttttatctgatgtgagatacat 35167982  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||| |||||||||||||||||    
T  35167983 aactcatacttgtacacaacaaca 35168006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 36492262 - 36492385
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||| | ||||||| ||||  ||| |||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36492262 gacaccacactcttatccaaaacctaaaggtaatgtgtttattggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatat 36492361  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| | |||||||||    
T  36492362 aactcacacttgcaaacaacaaca 36492385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 42405641 - 42405764
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||||||  | |||||||| ||| | |||||| |||||||||||||||||||| |||||||||| || ||||||||    
T  42405641 gacaccacactcttacccaaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaacctttactattttatccgatgttggacatat 42405740  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  42405741 aactcacacttgtacacaacaaca 42405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 35150119 - 35150002
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||| ||||| ||||||||||| | |||| |||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  35150119 gacaccacacttttacccaaaaccttaagacaatggatttatgggtc-tcttacttataaggtgttcaaccttgactcttttatccgatgtgggacatat 35150021  T
Q  103 aactcacacttgtacacaa 121  Q
    |||||||||||| ||||||    
T  35150020 aactcacacttgcacacaa 35150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 3295060 - 3295176
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| ||||||| |||| ||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  3295060 gacaccacactcatacccaaaacctcaaggcaatgggtttatgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 3295159  T
Q  103 aactcacacttgtacaca 120  Q
     ||||||||||| |||||    
T  3295160 -actcacacttgcacaca 3295176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 11417025 - 11417143
Alignment:
Q  6 atcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataac 105  Q
    |||||||||||||  ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  11417025 atcacactcttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataac 11417124  T
Q  106 tcacacttgtacacaacaaca 126  Q
    |  |||||| |||||||||||    
T  11417125 t--cacttgcacacaacaaca 11417143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 6500563 - 6500453
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| |||||||||  |||| ||||||||||||||||||||||||||||| |||||||||| || ||||||||    
T  6500563 gacaccacactcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacctttactattttatccgatgt-ggacatat 6500465  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  6500464 aactcacacttg 6500453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 27502081 - 27502192
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||| |||||||||| |||||||| || |||||||||||| |||||||||||||||||| |||||||||| |||||||| | |||||||||||    
T  27502081 gacaccacacttttaccaaaaatcttaaggcaataggtttatgggtcctcttacttataaggtgtttaacctttactattttatccaatgtgggacatat 27502180  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  27502181 aactcacacttg 27502192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 3295390 - 3295514
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||||||| ||||||||| || |||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||    
T  3295390 gacaacacactcttaccaaaa-ccttaaggcaattggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatat 3295488  T
Q  103 aactcacacttgtacacaacaacataa 129  Q
     ||||||||||  ||||||||| ||||    
T  3295489 -actcacacttccacacaacaagataa 3295514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 12662702 - 12662820
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| |||| |||||| | |||| |||||||||  ||||||||||||  ||||||||||||||| |||||||||| ||||||||||||||||    
T  12662702 cacactcttacccaaaaacttaagacaatggatttatgggttttcttacttataaaatgttcaacctttactattttatccgatgtgggacatataactc 12662801  T
Q  108 acacttgtacacaacaaca 126  Q
    ||||||| |||||||||||    
T  12662802 acacttgcacacaacaaca 12662820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 41632895 - 41632775
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||| ||||| ||  |||||||||||||| ||||||||||||||||||||||||||||| || ||||||| ||| |||||||    
T  41632895 gacaccacactcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatat 41632796  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||| ||||||| ||||||||    
T  41632795 aacttacacttgcacacaaca 41632775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 9498699 - 9498806
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| || |||| || ||| |||||||    
T  9498699 gacaccacactcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattctatctgatgtgagacatat 9498798  T
Q  103 aactcaca 110  Q
    ||||||||    
T  9498799 aactcaca 9498806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 6500935 - 6500825
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||| | ||||||||||||| ||| ||||||||||| | ||| ||||||||||||||||||||||| |||||||||| || ||||||||    
T  6500935 gacaccacactcttatccaaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactattttatccgatgt-ggacatat 6500837  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  6500836 aactcacacttg 6500825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 42508710 - 42508604
Alignment:
Q  18 ccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtac 117  Q
    |||||||||||||||| ||||||||||| ||| |||||||||| || |||| |||||||||| || ||||||| |||||| |||||| ||||||||||||    
T  42508710 ccaaaaaccttaaggcaatgggtttatgagtcctcttacttattagatgtttaacctttacttttctatccgatgtgggatatataattcacacttgtac 42508611  T
Q  118 acaacaa 124  Q
    |||||||    
T  42508610 acaacaa 42508604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 24489256 - 24489369
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||  |||| |||||||| ||||||||||||||  ||||||| |||||||||| ||||||| || || |||| || ||||||||||||||||    
T  24489256 cacactcttacgcaaaatcttaaggcaatgggtttatgggt--tcttactaataaggtgtttaaccttttcttttctatctgatgtgggacatataactc 24489353  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  24489354 acacttgaacacaaca 24489369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 35914930 - 35914838
Alignment:
Q  35 atgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaacat 127  Q
    |||| |||| ||||| ||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||    
T  35914930 atggatttacgggtcttcttacttataaaatgttcaacctttactcttttatccgatgtgtgacatataactcatacttatacacaacaacat 35914838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 623931 - 623820
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||  ||||||||||||| ||  |||||||| ||| ||||||| ||| |||||||||||||||| || ||||||| ||| |||||||    
T  623931 gacaccacactcttactcaaaaccttaaggctataagtttatggctcaacttacttgtaaagtgttcaacctttactattatatccgatgtgagacatat 623832  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  623831 aactcacacttg 623820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 15370510 - 15370427
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgac 91  Q
    |||||||||||  ||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||    
T  15370510 cacactcttacgcaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacatttactgtttcatccgac 15370427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 29549305 - 29549411
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||| | ||||||||||||  ||| ||||||||||| ||||||||||| |||||||| |||||||| ||||||| ||  ||| |||||||||||    
T  29549305 cacactcttatccaaaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttcatcctttactattttatctgatatggaacatataactc 29549404  T
Q  108 acacttg 114  Q
    |||||||    
T  29549405 acacttg 29549411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 39309764 - 39309677
Alignment:
Q  35 atgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaaca 123  Q
    |||||||||||| || ||||| |||||| ||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||    
T  39309764 atgggtttatgg-tcctcttatttataatgtgttcaacatttacccttttatccgatgtgggacatataactcatacttgtacacaaca 39309677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 301024 - 300949
Alignment:
Q  51 tcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||||||||||||| ||||||||||||| ||||||| || |||||||||||||| ||||||||||||||| ||||    
T  301024 tcttacttataaggtattcaacctttactgttttatctgatgtgggacatataacccacacttgtacacaaaaaca 300949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 26074398 - 26074320
Alignment:
Q  36 tgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    |||||||||||||| ||||||||||||||||||||| ||||| | || |||| || |||||||||||||||||||||||    
T  26074398 tgggtttatgggtcctcttacttataaggtgttcaatctttagttttctatctgatgtgggacatataactcacacttg 26074320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 33747884 - 33747783
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||| | |||| |||||||| ||| |||||||| || |||||||||||| || || |||||||||| |||||||||| |||||||||||    
T  33747884 gacaccacactcttatccaaaatcttaaggcaatgagtttatggatcctcttacttataaagtatttaacctttactattttatccgatgtgggacatat 33747785  T
Q  103 aa 104  Q
    ||    
T  33747784 aa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 41635242 - 41635359
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||||| ||||  ||||| | |||| ||||||| || ||||| |||||||||||||||| |||||||||||||| || | |  ||||||||||||    
T  41635242 acactcttacctaaaattttaagacaatggatttatggatcctcttatttataaggtgttcaacatttactcttttatctgatgggaaacatataactca 41635341  T
Q  109 cacttgtacacaacaaca 126  Q
     |||| ||||||||||||    
T  41635342 tacttatacacaacaaca 41635359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 38427656 - 38427553
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||  ||||||||||| | |||| || ||||||| ||| ||||||||| ||||||||||||||| || ||||| | |||||||||||||||    
T  38427656 tcacactcttacacaaaaccttaagacaatggattaatgggtcctct-acttataagatgttcaacctttacttttctatccaatgtgggacatataact 38427558  T
Q  107 cacac 111  Q
    |||||    
T  38427557 cacac 38427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 36521946 - 36522061
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| || |||||||||||| ||| | ||| |  |||||||||||  ||| || |||| || ||||||||||||||||    
T  36521946 cacactcttacccaaaaccttaaggcaattggtttatgggtcctctcatttaaagagtgttcaacctcaacttttctatctgatgtgggacatataactc 36522045  T
Q  108 acacttgtacacaaca 123  Q
    |||||||  |||||||    
T  36522046 acacttgcgcacaaca 36522061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 7768925 - 7768852
Alignment:
Q  41 ttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||||||| | ||||||||||||||||||||||||| | |||||||||| || ||| ||||||||||||||||    
T  7768925 ttatgggtccttttacttataaggtgttcaacctttattattttatccgatgtaggatatataactcacacttg 7768852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 31509719 - 31509615
Alignment:
Q  20 aaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacac 119  Q
    |||||||| ||||| ||| ||||||| ||| ||| |||||||| ||| |||||||  ||| || ||||||| ||| ||||||||||||||||||| ||||    
T  31509719 aaaaacctcaaggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatataactcacacttgcacac 31509620  T
Q  120 aacaa 124  Q
    |||||    
T  31509619 aacaa 31509615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 13786046 - 13786166
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacat-a 101  Q
    ||||||||||||||| | |||| |||||| | || | |||| |||||||||||||||||| |||||||||| | ||| |||||||||| |||  |||| |    
T  13786046 gacatcacactcttatccaaaatcttaagacaatagatttacgggtcatcttacttataaagtgttcaaccatcact-ttttatccgatgtgaaacataa 13786144  T
Q  102 taactcacacttgtacacaaca 123  Q
    | |||||||||||| |||||||    
T  13786145 ttactcacacttgtgcacaaca 13786166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 2411114 - 2411010
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||||  ||||||||||||| ||  ||||||||||  ||||||||| ||| |||||||| ||||||  | ||||| | || ||||||||||||||    
T  2411114 acactcttactcaaaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaacttttacttctctatccaatgtaggacatataactca 2411015  T
Q  109 cactt 113  Q
    |||||    
T  2411014 cactt 2411010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 35150789 - 35150737
Alignment:
Q  74 tttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  35150789 tttactcttttattcgatgtgggacatataactcacacttgcacacaacaaca 35150737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 35151080 - 35151028
Alignment:
Q  74 tttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  35151080 tttactcttttattcgatgtgggacatataactcacacttgcacacaacaaca 35151028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 5723884 - 5723947
Alignment:
Q  51 tcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    |||||| ||||| ||||||||| |||| | |||||||||| |||||||||||||||||||||||    
T  5723884 tcttacatataatgtgttcaacttttattattttatccgatgtgggacatataactcacacttg 5723947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 26590960 - 26591031
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttact 79  Q
    |||||||||||  |||||||||||||  ||  ||||||| || |||||||||||||||||||||||||||||    
T  26590960 cacactcttactcaaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaacctttact 26591031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 6225104 - 6225047
Alignment:
Q  56 cttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacactt 113  Q
    |||||||||||||||||||||| ||||||||| || |||||| |||||||||| ||||    
T  6225104 cttataaggtgttcaacctttattcttttatctgatgtgggatatataactcagactt 6225047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 26900082 - 26900138
Alignment:
Q  70 aacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    |||||| ||||||||||| || ||||||||||||||||| | |||||||||||||||    
T  26900082 aaccttaactcttttatctgatgtgggacatataactcaaatttgtacacaacaaca 26900138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 36522282 - 36522392
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||||   |||||||||| |||| ||| ||||||||  |||||||| |  | | || ||||| | ||| |||||||    
T  36522282 gacaccacactcttacccaaaaccttaagataatgggtttattggtcctctcacttataaaatgttcaacttccatttttctatccaatgtgagacatat 36522381  T
Q  103 aactcacactt 113  Q
    |||||||||||    
T  36522382 aactcacactt 36522392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 42524814 - 42524717
Alignment:
Q  18 ccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgta 116  Q
    ||||||||||| || | |||| |||||| ||| ||||| | ||||| |||||||| |||||| || ||||||| ||| ||||||||| |||||||||||    
T  42524814 ccaaaaaccttcagacaatggatttatgagtcctcttattcataagatgttcaac-tttacttttctatccgatgtgagacatataattcacacttgta 42524717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 36527217 - 36527249
Alignment:
Q  92 gtgggacatataactcacacttgtacacaacaa 124  Q
    |||||||||||||||||||||||||||||||||    
T  36527217 gtgggacatataactcacacttgtacacaacaa 36527249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 13042367 - 13042321
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtc 49  Q
    |||||||||||||||||||||||  |||| |||||||||| ||||||    
T  13042367 gacatcacactcttaccaaaaactctaagacgatgggtttttgggtc 13042321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 13042652 - 13042606
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtc 49  Q
    |||| |||||||||| | ||||||||||||| |||||||||||||||    
T  13042652 gacaccacactcttatccaaaaccttaaggcaatgggtttatgggtc 13042606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 13112361 - 13112315
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtc 49  Q
    |||||||||||||||||||||||  |||| |||||||||| ||||||    
T  13112361 gacatcacactcttaccaaaaactctaagacgatgggtttttgggtc 13112315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 7517693 - 7517568
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7517693 gacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatat 7517594  T
Q  103 aactcacacttgtacacaacaacata 128  Q
    |||||||||||| |||||||||||||    
T  7517593 aactcacacttgcacacaacaacata 7517568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 30244383 - 30244260
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  30244383 gacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactcttttatccgatgtgggacatat 30244284  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  30244283 aactcacacttgtacacaacaaca 30244260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 30245190 - 30245067
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  30245190 gacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacctttactcttttatccgatgtggaacatat 30245091  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  30245090 aactcacacttgtacacaacaaca 30245067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 7554138 - 7554015
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  7554138 gacaccacactcttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 7554039  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  7554038 aactcacacttgcacacaacaaca 7554015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 1085666 - 1085784
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  1085666 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgggacatataactc 1085765  T
Q  108 acacttgtacacaacaaca 126  Q
    ||||||| |||||||||||    
T  1085766 acacttgcacacaacaaca 1085784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 22566712 - 22566830
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  22566712 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactc 22566811  T
Q  108 acacttgtacacaacaaca 126  Q
    ||||||| | |||||||||    
T  22566812 acacttgcatacaacaaca 22566830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 45434749 - 45434626
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||||||||||||| |||||||||||||  |  ||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  45434749 gacatcacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacctttacttttttatccgatgtgggacatat 45434650  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||| |||||||||||||||||||    
T  45434649 aacttacacttgtacacaacaaca 45434626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 45754828 - 45754706
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| |||||||||| || ||||||||    
T  45754828 gacaccacactcttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttactattttatccgatgt-ggacatat 45754730  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  45754729 aactcacacttgtacacaacaaca 45754706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 22567084 - 22567209
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  22567084 gacaccacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgt-ggacatat 22567182  T
Q  103 aactcacacttgtacacaacaacataa 129  Q
     ||||||||||| | ||||||||||||    
T  22567183 tactcacacttgcatacaacaacataa 22567209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 24177543 - 24177425
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||||||||| ||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  24177543 cacactcttaccaaaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttttatccgatgtgggacatataactc 24177444  T
Q  108 acacttgtacacaacaaca 126  Q
    | ||||| |||||||||||    
T  24177443 atacttgcacacaacaaca 24177425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 40094824 - 40094942
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||    
T  40094824 cacactcttacccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttactcttttattcgatgtgagacatataactc 40094923  T
Q  108 acacttgtacacaacaaca 126  Q
    ||||||| |||||||||||    
T  40094924 acacttgcacacaacaaca 40094942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 45433354 - 45433229
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||| |||||||| || |||||||| ||  |||||||||||||||||||||||||||||||||||||||| ||||  |||||    
T  45433354 gacaccacactcttacccaaaatcttaaggcaataggtttatgagttctcttacttataaggtgttcaacctttactcttttatccgatgtggatcatat 45433255  T
Q  103 aactcacacttgtacacaacaacata 128  Q
    ||||||||||||||||||||||||||    
T  45433254 aactcacacttgtacacaacaacata 45433229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 23422 - 23546
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||| || ||||||| |||| ||||||    
T  23422 gacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattgtatccgatgtggaacatat 23521  T
Q  103 aactcacacttgtacacaacaacat 127  Q
    |||||||| ||| ||||||||||||    
T  23522 aactcacaattgcacacaacaacat 23546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 16569302 - 16569186
Alignment:
Q  10 cactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcac 109  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| || ||||||| ||| ||||||||||||||    
T  16569302 cactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcac 16569203  T
Q  110 acttgtacacaacaaca 126  Q
    ||||| | |||||||||    
T  16569202 acttgcatacaacaaca 16569186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 16596360 - 16596476
Alignment:
Q  10 cactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcac 109  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| || ||||||| ||| ||||||||||||||    
T  16596360 cactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcac 16596459  T
Q  110 acttgtacacaacaaca 126  Q
    ||||| | |||||||||    
T  16596460 acttgcatacaacaaca 16596476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 29157678 - 29157567
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  29157678 gacaccacactcttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtgggacatat 29157579  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  29157578 aactcacacttg 29157567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 47129208 - 47129085
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| ||||||| |||| |||||||||| |||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||| ||| |||||||    
T  47129208 gacaccacactcctacccaaaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtgagacatat 47129109  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||| ||||||||||    
T  47129108 aactcacacttgtgcacaacaaca 47129085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 34218079 - 34218202
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||| | ||||||||||| ||| ||| |||||||||||||||||| |||||| |||||||||| ||| |||||||    
T  34218079 gacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttacttttttatccgatgtgagacatat 34218178  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||| |||||||||||||||    
T  34218179 aactcacatttgtacacaacaaca 34218202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 6054673 - 6054555
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||||| |||||| |||||||||| ||| |||||||    
T  6054673 gacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtgagacatat 6054574  T
Q  103 aactcacacttgtacacaa 121  Q
    |||| |||||||| |||||    
T  6054573 aactaacacttgtccacaa 6054555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 30032676 - 30032555
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| ||||||||||||| || ||||||||| |  ||||||||||||||||||||||  |||||||||||| ||| |||||||||||||||    
T  30032676 tcacactcttacccaaaaccttaaggctataggtttatggatactcttacttataaggtgttcaacacttactcttttattcgatgtgggacatataact 30032577  T
Q  107 cacacttgtacacaacaacata 128  Q
    ||||| ||||| ||||||||||    
T  30032576 cacacatgtacgcaacaacata 30032555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 11845304 - 11845183
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||| | ||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||    
T  11845304 gacaccacactcttatccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatat 11845205  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||  ||||||| ||||||||||    
T  11845204 aact--cacttgtgcacaacaaca 11845183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 37533067 - 37533166
Alignment:
Q  15 ttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  37533067 ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacacttg 37533166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 41910654 - 41910765
Alignment:
Q  18 ccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtac 117  Q
    ||||||| |||||| | ||||||||||||||| ||| | ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  ||    
T  41910654 ccaaaaatcttaagccaatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtgggacatataactcacacttacac 41910753  T
Q  118 acaacaacataa 129  Q
    ||||||||||||    
T  41910754 acaacaacataa 41910765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 36534834 - 36534952
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||| |  | |||||||||||| |||||||||||||||||||||||| |||| |||||||||| ||||||||||||| |     
T  36534834 cacactcttacccaaaaccttaagactttaggtttatgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggacatataagtt 36534933  T
Q  108 acacttgtacacaacaaca 126  Q
    ||||||| |||||||||||    
T  36534934 acacttgcacacaacaaca 36534952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 36939783 - 36939900
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||| ||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| |||||| |||||| |||  |||||||||||||||    
T  36939783 cacacttttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacttttactattttatacgatttgggacatataactc 36939882  T
Q  108 acacttgtacacaacaac 125  Q
    ||||||| ||| ||||||    
T  36939883 acacttgcacagaacaac 36939900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 8128486 - 8128606
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||| | ||||||||||||  ||||||||||||||| |||||| |||||||||||||||||||| | || |||||||  ||||||||||    
T  8128486 gacaccacactcttaaccaaaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaacctttatttttctatccgatatgggacatat 8128585  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||||||||||| ||||||||    
T  8128586 aactcacacttgcacacaaca 8128606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 24838750 - 24838870
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcat-cttacttataaggtgttcaacctttactcttttatccgacgtgggacatataac 105  Q
    ||||||||||||| ||||||||||| | | |||||||||| || | ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  24838750 tcacactcttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaacctttactcttttattcgatgtgagacatataac 24838849  T
Q  106 tcacacttgtacacaacaaca 126  Q
    | |||||| ||||||||||||    
T  24838850 ttacacttatacacaacaaca 24838870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 14681623 - 14681512
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||| | ||||||||||||| | ||||||||| ||||||||||||||||||| ||||||| || |||||||||||    
T  14681623 gacaccacactcttacccaaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaacctttactattttatctgatgtgggacatat 14681524  T
Q  103 aactcacacttg 114  Q
    |||| |||||||    
T  14681523 aacttacacttg 14681512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 118351 - 118469
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||| ||  |||||||||||| || |||||||||| |||||||||||||||||| || |||| || |||||||||||||||     
T  118351 cacactcttacccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaacctttacttttctatctgatgtgggacatataactt 118450  T
Q  108 acacttgtacacaacaaca 126  Q
    ||||||| |||||||||||    
T  118451 acacttgcacacaacaaca 118469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 37533409 - 37533519
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||| | | || | ||||||    
T  37533409 gacaccacactcttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtagaacatat 37533508  T
Q  103 aactcacactt 113  Q
    |||||||||||    
T  37533509 aactcacactt 37533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 19122844 - 19122740
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| |||| |||||| ||| ||||||||||||||||||||||||||||| |||||||||| || ||||||||    
T  19122844 gacaccacactcttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaacctttactattttatccgatgt-ggacatat 19122746  T
Q  103 aactca 108  Q
    ||||||    
T  19122745 aactca 19122740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 30245559 - 30245484
Alignment:
Q  51 tcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  30245559 tcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaaca 30245484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 30255404 - 30255329
Alignment:
Q  51 tcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  30255404 tcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaacaaca 30255329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 43241608 - 43241485
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||| ||| ||||| ||||||||||| | ||  ||||||| ||| | ||||||||||||||||||||||||| | |||||||||| |||| ||||||    
T  43241608 gacatcatacttttacctaaaaccttaagtcaataagtttatgagtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatat 43241509  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  43241508 aactcacacttgcacacaacaaca 43241485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 40230348 - 40230454
Alignment:
Q  15 ttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||| ||||||||||| | ||||||||||||||| ||||||||||||| |||||||| |||||| |||||| ||| ||||||||||||||| |||||||    
T  40230348 ttacccaaaaccttaagactatgggtttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtgggacatataacttacacttg 40230447  T
Q  115 tacacaa 121  Q
     ||||||    
T  40230448 cacacaa 40230454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 30244771 - 30244691
Alignment:
Q  46 ggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    |||| ||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  30244771 ggtcctcttatttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaacaaca 30244691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 36623065 - 36622949
Alignment:
Q  11 actcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcaca 110  Q
    |||| |||| ||||||||||||| |||| ||||||| || || |||||||||  |||| |||||||||| |||||||||| |||||||||||||||||||    
T  36623065 actcctacccaaaaccttaaggcaatggatttatggatcctcctacttataaaatgtttaacctttactattttatccgatgtgggacatataactcaca 36622966  T
Q  111 cttgtacacaacaacat 127  Q
    |||| |||||| |||||    
T  36622965 cttgcacacaataacat 36622949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 41854743 - 41854624
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| |||||||||||||  |   ||||| ||||||||| |||||||||||||||||||||||||||||| | || |||||||||||||||    
T  41854743 tcacactcttacccaaaaccttaaggcattatatttataggtcatcttgcttataaggtgttcaacctttactctttta-ctgatgtgggacatataact 41854645  T
Q  107 cacacttgtacacaacaacat 127  Q
    || ||||| |||||| |||||    
T  41854644 catacttgcacacaaaaacat 41854624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 1085298 - 1085417
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacat-ataact 106  Q
    |||||||||||| ||||||||||||| ||| ||||||||||  |||||||||| || |||||||| |||||| ||||||||||  |||||||| | ||||    
T  1085298 cacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatccgatatgggacataaaaact 1085397  T
Q  107 cacacttgtacacaacaaca 126  Q
    |||||||| |||||||||||    
T  1085398 cacacttgcacacaacaaca 1085417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 28301613 - 28301708
Alignment:
Q  28 taaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaaca 123  Q
    |||||| ||||||||||||||| |||||||||||||||||||| | |||||| || ||||||| ||| ||||||||||||||||||| ||||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaaca 28301708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 36109010 - 36109084
Alignment:
Q  51 tcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaac 125  Q
    |||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||| ||||||||||    
T  36109010 tcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaacaac 36109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 44361517 - 44361616
Alignment:
Q  11 actcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcaca 110  Q
    ||||||||| |||||| |||||  |||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||| ||||||    
T  44361517 actcttacctaaaaccgtaaggttatgggtttatggatcatcttactta-aaggtgttcaacttttactcttttatccgatgtgagacatatatctcaca 44361615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 9901756 - 9901635
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||| | ||| |||||||| || ||| || |||||| ||||||||||||||| |||||||||| || ||||||||    
T  9901756 gacaccacactcttacccaaaaccttaagacaatgagtttatggatcctct-acgtataagatgttcaacctttactgttttatccgatgt-ggacatat 9901659  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||| ||||||| ||||    
T  9901658 aactcacacttatacacaataaca 9901635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 20599418 - 20599304
Alignment:
Q  12 ctcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacac 111  Q
    |||||||| ||||| ||||||| ||| ||||||  ||| ||||| |||||| ||||| | |||||||| ||||||||||  |||||||||||||||||||    
T  20599418 ctcttacccaaaacgttaaggcaatgagtttatatgtcctcttatttataaagtgtttatcctttacttttttatccgatatgggacatataactcacac 20599319  T
Q  112 ttgtacacaacaaca 126  Q
    || || |||||||||    
T  20599318 ttatagacaacaaca 20599304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 36967335 - 36967399
Alignment:
Q  64 gtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaacata 128  Q
    ||||| || ||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  36967335 gtgtttaatctttacttttttatccgatgtgagacatataactcacacttgtacacaacaacata 36967399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 30253605 - 30253534
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacct 74  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||||||  ||||||||||||||| ||||||||    
T  30253605 gacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaacct 30253534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 40094502 - 40094559
Alignment:
Q  66 gttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaaca 123  Q
    |||||||||||||||||||||| || || |||||||||||||||||||| ||||||||    
T  40094502 gttcaacctttactcttttatctgatgttggacatataactcacacttgcacacaaca 40094559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 23569047 - 23569091
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatggg 47  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||    
T  23569047 gacatcacactcttacccaaaaccttaaggcaatgggtttatggg 23569091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 28300303 - 28300366
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttat-gggtcatcttacttataaggtgttca 70  Q
    |||||||||||| |||| |||||||| |||||||||| ||||  ||||||||||||||||||||    
T  28300303 cacactcttacccaaaatcttaaggcaatgggtttatggggttctcttacttataaggtgttca 28300366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 21416186 - 21416232
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtc 49  Q
    |||| |||||||||||| |||||| |||||| |||||||||||||||    
T  21416186 gacaccacactcttacccaaaaccctaaggcaatgggtttatgggtc 21416232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 9e-49; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 15880371 - 15880253
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  15880371 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactc 15880272  T
Q  108 acacttgtacacaacaaca 126  Q
    |||||||||||||||||||    
T  15880271 acacttgtacacaacaaca 15880253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 6421498 - 6421375
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||| ||||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6421498 gacaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatat 6421399  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||| ||||||||||    
T  6421398 aactcacacttgtgcacaacaaca 6421375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 36178650 - 36178761
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  36178650 gacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 36178749  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  36178750 aactcacacttg 36178761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 14745717 - 14745823
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  14745717 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactc 14745816  T
Q  108 acacttg 114  Q
    |||||||    
T  14745817 acacttg 14745823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 37106296 - 37106190
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  37106296 cacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactc 37106197  T
Q  108 acacttg 114  Q
    |||||||    
T  37106196 acacttg 37106190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 6713090 - 6712966
Alignment:
Q  3 gacatcacactcttacc-aaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacata 101  Q
    ||||||||||||||||| ||||||||||| || || |||||||||||| |||||||||||||||||||||| |||||| |||||||||| ||| ||||||    
T  6713090 gacatcacactcttacccaaaaaccttaaagcaataggtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgagacata 6712991  T
Q  102 taactcacacttgtacacaacaaca 126  Q
    ||||||||||||||| |||||||||    
T  6712990 taactcacacttgtatacaacaaca 6712966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 5542670 - 5542781
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||| |||||| |||  ||||||||||    
T  5542670 gacaccacactcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattttattcgatatgggacatat 5542769  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  5542770 aactcacacttg 5542781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 41283525 - 41283631
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  41283525 cacactcttacctaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatatgggacatataactc 41283624  T
Q  108 acacttg 114  Q
    |||||||    
T  41283625 acacttg 41283631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 962711 - 962591
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||| | ||||||||||||||| ||| ||||||||||||||||||||||||| || ||||||| |||||||||||    
T  962711 gacaacacactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttacttttctatccgatgtgggacatat 962612  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||||||||||| | ||||||    
T  962611 aactcacacttgcatacaaca 962591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 28254282 - 28254406
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||||||| || ||||||| |||||||||||    
T  28254282 gacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgggacatat 28254381  T
Q  103 aactcacacttgtacacaacaacat 127  Q
    || ||||||| | ||||||||||||    
T  28254382 aagtcacactggcacacaacaacat 28254406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 38796673 - 38796788
Alignment:
Q  11 actcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcaca 110  Q
    ||||||||| |||||||||||||  | |||||||||||| ||||||||||||||||||||||||||| | ||||||| || |||||||||||||||||||    
T  38796673 actcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacctttattgttttatcagatgtgggacatataactcaca 38796772  T
Q  111 cttgtacacaacaaca 126  Q
    |||| |||||||||||    
T  38796773 cttgcacacaacaaca 38796788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 42514757 - 42514642
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| || || |||||||||||||    
T  42514757 cacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatctgatgtaggacatataactc 42514658  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| | ||||||    
T  42514657 acacttgcatacaaca 42514642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 36005930 - 36006047
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||| ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||||| |||||| || ||| ||| ||||||||||||||||    
T  36005930 cacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacttttact-ttctattcgatgtgggacatataactc 36006028  T
Q  108 acacttgtacacaacaaca 126  Q
    |||||||||||||||||||    
T  36006029 acacttgtacacaacaaca 36006047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 5367563 - 5367448
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||  ||| ||| |||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||  ||    
T  5367563 cacactcttacccaaaaccttaaggttatgtgttcatggatcatcttacttataaggtgttcaacctttgctcttttatccgatctgggacatatatatc 5367464  T
Q  108 acacttgtacacaaca 123  Q
    ||||||||||||||||    
T  5367463 acacttgtacacaaca 5367448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 5543043 - 5543154
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||| |||||||| || ||||||||| || ||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  5543043 gacaccacactcttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatat 5543142  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  5543143 aactcacacttg 5543154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 28531364 - 28531479
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| |||| |||||||| ||| ||||||||| | |||||||||||||||||||||||||| || || ||||||| ||||||||||||||||    
T  28531364 cacactcttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataactc 28531463  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  28531464 acacttgcacacaaca 28531479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 31259666 - 31259787
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatcc---gacgtgggacatataa 104  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||   || ||| |||||||||    
T  31259666 cacactcttacccaaaaccttaaggtgataggtttatgggtcatcttacttataaggtgttgaacctttactcttttatccgatgatgtgagacatataa 31259765  T
Q  105 ctcacacttgtacacaacaaca 126  Q
    ||| |||||  |||||||||||    
T  31259766 ctcgcacttacacacaacaaca 31259787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 37106037 - 37105926
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||| |||||||| ||| |||||||||||  |||||||||||||||||||||||||||| |||||| ||| |||||||||||    
T  37106037 gacaccacactcttacccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaacctttactattttattcgatgtgggacatat 37105938  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  37105937 aactcacacttg 37105926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 40679679 - 40679794
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| |||| |||||||||||||||||||||||  ||||||||||||||||||||||| ||||| || |||||||  |||||||||||||||    
T  40679679 cacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacccttacttttctatccgatatgggacatataactc 40679778  T
Q  108 acacttgtacacaaca 123  Q
    ||| ||| ||||||||    
T  40679779 acatttgcacacaaca 40679794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 40733630 - 40733507
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||| ||||||   | |||||||||||| |||||||||||||||||||||| |||||| ||||||| || |||||||||||    
T  40733630 gacaccacactcttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggtgttcaacatttacttttttatctgatgtgggacatat 40733531  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||| ||||    
T  40733530 aactcacacttgtacacaataaca 40733507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 36178320 - 36178425
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||||| ||||||||||| | ||||||||||| |||  |||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||    
T  36178320 acactcttacccaaaaccttaagacaatgggtttatgagtccccttacttataaggtgttccacctttactattttatccgaagtgggacatataactca 36178419  T
Q  109 cacttg 114  Q
    ||||||    
T  36178420 cacttg 36178425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 15511540 - 15511661
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||| |||||| | ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  ||| |||||||    
T  15511540 gacaccacactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacctttactcttttatccgttgtgtgacatat 15511639  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||  |||||| |||||||||||    
T  15511640 aact--cacttgcacacaacaaca 15511661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 31468797 - 31468914
Alignment:
Q  5 catcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataa 104  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||| |||||    |||| | ||||||||||||| |||||||||| |||||||||||||    
T  31468797 catcacactcttacccaaaaccttaaggcaatgagtttatgggtcctctta----taagatattcaacctttactattttatccgatgtgggacatataa 31468892  T
Q  105 ctcacacttgtacacaacaaca 126  Q
    |||||||||| |||||||||||    
T  31468893 ctcacacttgcacacaacaaca 31468914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 35580776 - 35580886
Alignment:
Q  10 cactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcac 109  Q
    |||||||||| ||||||||||||| |||||||||||| || ||| |||||||||||||||||| |||| | |||||||||| ||||||||||||||||||    
T  35580776 cactcttacccaaaaccttaaggcaatgggtttatgg-tcctctcacttataaggtgttcaacatttattgttttatccgatgtgggacatataactcac 35580874  T
Q  110 acttgtacacaa 121  Q
    ||||| ||||||    
T  35580875 acttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 33731753 - 33731636
Alignment:
Q  11 actcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc--a 108  Q
    ||||||||| ||||||||||||| || ||||||||| || |||||||||||||||| ||||||||||||||||||||||| ||| || |||||||||  |    
T  33731753 actcttacccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctcaacctttactcttttatccgatgtgagatatataactcaca 33731654  T
Q  109 cacttgtacacaacaaca 126  Q
    |||||| |||||||||||    
T  33731653 cacttgaacacaacaaca 33731636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 16542556 - 16542439
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||||  |||| |||||||| ||| ||||||  ||| ||||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||    
T  16542556 acactcttactcaaaatcttaaggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacttataactca 16542457  T
Q  109 cacttgtacacaacaaca 126  Q
    |||||| |||||||||||    
T  16542456 cacttgcacacaacaaca 16542439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 38796298 - 38796386
Alignment:
Q  38 ggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||||| |||| |||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| |||||||||||    
T  38796298 ggtttataggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaacaaca 38796386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 31899496 - 31899595
Alignment:
Q  28 taaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaacat 127  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||| |||||| |||||||||| |||| |||||||||||||||||  ||||||||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaacaacat 31899595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 37632647 - 37632762
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| |||||||||| |  ||||||||||||||| ||||||||||||  |||  |||||||||| |||||||||| || |||||||||||||    
T  37632647 cacactcttacccaaaaccttaaagttatgggtttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactc 37632746  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  37632747 acacttgcacacaaca 37632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 14745344 - 14745446
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||||||||||||||| || |||||| ||| ||||||||| ||||| |||||| ||| ||||||||||||||||    
T  14745344 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtgggacatataactc 14745443  T
Q  108 aca 110  Q
    |||    
T  14745444 aca 14745446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 6422223 - 6422126
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacat 100  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||||| ||||||| || |||||||||    
T  6422223 gacaccacactcttacctaaaaccttaaggctatgggtttatgggtcctcttaattataatgtgttcaacctttacttttttatctgatgtgggacat 6422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 29677021 - 29676893
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatctt-----acttataaggtgttcaacctttactcttttatccgacgtggga 97  Q
    |||| |||||||||||  ||| ||||||||| ||||||||||||||| |||      || ||||||||||| ||||||||||||||||||||| ||||||    
T  29677021 gacaccacactcttacttaaagccttaaggcaatgggtttatgggtcttctcctctcacctataaggtgttaaacctttactcttttatccgatgtggga 29676922  T
Q  98 catataactcacacttgtacacaacaaca 126  Q
    |||||||||||||| || |||||||||||    
T  29676921 catataactcacacctgcacacaacaaca 29676893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 7598714 - 7598606
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||||||||| ||||||        ||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  7598714 gacaccacactcttaccaaaaacgttaagg--------ttatgggtcctcttacttataaggtgttcaacctttacttttttatctgatgtgggacatat 7598623  T
Q  103 aactcacacttgtacac 119  Q
    |||||||||||| ||||    
T  7598622 aactcacacttgcacac 7598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 40733995 - 40733873
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||| |||||||  | |||| ||| | | |||||||||||||||||| || |||||||||||||| ||| |||||||||||    
T  40733995 gacaccacactcttacccaaaactttaaggctgtaggtt-atgagccctcttacttataaggtgttaaatctttactcttttattcgatgtgggacatat 40733897  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||| ||||    
T  40733896 aactcacacttgtacacaataaca 40733873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 36178221 - 36178311
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggac 98  Q
    |||||||||||| |||| |||||||| ||||||||||||||   |||||||||||||||||||||||||||| |||||||||| |||||||    
T  36178221 cacactcttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaacctttactattttatccgatgtgggac 36178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 1769969 - 1769889
Alignment:
Q  39 gtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacac 119  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  1769969 gtttatgagtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 23346349 - 23346228
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggac--at 100  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| | ||||| |||||||||||| |||||||||| || ||| ||| ||| |||  ||    
T  23346349 gacatcacactcttaccgaaaaccttaaggctatgggtttatgggccctctta-ttataaggtgtttaacctttacttttctatacgatgtgagacatat 23346251  T
Q  101 ataactcacacttgtacacaaca 123  Q
    |||||||||||| | ||||||||    
T  23346250 ataactcacactcgcacacaaca 23346228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 36785664 - 36785731
Alignment:
Q  59 ataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||    
T  36785664 ataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 36785731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 123
Target Start/End: Original strand, 33561499 - 33561616
Alignment:
Q  6 atcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataac 105  Q
    |||||||||||||| ||||||||||| | ||| ||||||||||| ||| |||||||| ||||| |||||  ||| || |||| || |||| |||||||||    
T  33561499 atcacactcttacccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatgtggaacatataac 33561598  T
Q  106 tcacacttgtacacaaca 123  Q
    ||||||||| ||||||||    
T  33561599 tcacacttgcacacaaca 33561616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 29874073 - 29874185
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||| | ||||||||||||| ||||||||||||||| ||  | |||||| |||||||||||  ||| || |||| || |||||||||||||| |    
T  29874073 cacactcttatccaaaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaacctccacttttctatctgatgtgggacatataacac 29874172  T
Q  108 acacttgtacaca 120  Q
    |||||||||||||    
T  29874173 acacttgtacaca 29874185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 37895111 - 37895227
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||||||||||| ||  | |||||| |||||| |||||| |||| | || ||||||| ||||||||||||||||    
T  37895111 cacactcttacccaaaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaacttttatttttctatccgatgtgggacatataactc 37895210  T
Q  108 acacttgtacacaacaa 124  Q
    | ||| | |||||||||    
T  37895211 aaactcgcacacaacaa 37895227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 40163453 - 40163520
Alignment:
Q  38 ggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataac 105  Q
    |||| ||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  40163453 ggttaatgggtcatcttacttataaggtgttcaacctttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 6421352 - 6421294
Alignment:
Q  68 tcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  6421352 tcaacctttactcttttatccgatgtgggacatataacttacacttgtacacaacaaca 6421294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 7598331 - 7598225
Alignment:
Q  13 tcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacact 112  Q
    ||||||| ||||||||||||| ||| ||||||||||| ||||| |||||||||||| |||||||||| || ||| ||| || | |||||||| |||||||    
T  7598331 tcttacccaaaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaacctttacttttctattcgatgtagaacatataattcacact 7598232  T
Q  113 tgtacac 119  Q
    || ||||    
T  7598231 tgcacac 7598225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 12529091 - 12529195
Alignment:
Q  21 aaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacaca 120  Q
    ||||| ||||||| ||| ||||||| ||| ||||||||||| ||||||||| ||||||| ||||||  || || |||||||||||||||||||| | |||    
T  12529091 aaaactttaaggcaatgagtttatgagtcctcttacttatacggtgttcaatctttactgttttatttgatgtaggacatataactcacacttgcataca 12529190  T
Q  121 acaac 125  Q
    |||||    
T  12529191 acaac 12529195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 30313285 - 30313170
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| |||| |||||||| ||| |||| |||||| ||| |||||||| |||||||||||  ||| || ||||||| ||| |||||||||| |    
T  30313285 cacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttataa-gtgttcaacctccacttttctatccgatgtgagacatataacac 30313187  T
Q  108 acacttgtacacaacaa 124  Q
    || |||| |||||||||    
T  30313186 acgcttgcacacaacaa 30313170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 30323572 - 30323456
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||| |||||| |||| ||| |||| ||| |||||||||||  | | || |||| ||  ||||||||||||| |    
T  30323572 cacactcttacccaaaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttcaacctccaattttctatctgatttgggacatataacac 30323473  T
Q  108 acacttgtacacaacaa 124  Q
    ||||||| |||||||||    
T  30323472 acacttgcacacaacaa 30323456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 33953815 - 33953936
Alignment:
Q  2 ggacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacata 101  Q
    |||| ||||||||||||| ||||  ||||||| |  |||||||||||| ||| |||||||  |||||||||||  ||| || |||| || ||||||| ||    
T  33953815 ggacgtcacactcttacccaaaattttaaggcaacaggtttatgggtcctctcacttatatagtgttcaacctccacttttctatctgatgtgggactta 33953914  T
Q  102 taactcacacttgtacacaaca 123  Q
    ||||||||| ||| ||||||||    
T  33953915 taactcacatttgcacacaaca 33953936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 37894742 - 37894855
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||| ||| | |||| |||||||| |||| |||||| ||| ||||||||||||||| || | |||||||| || ||| | | ||||||||||||||||    
T  37894742 cacacttttaaccaaaatcttaaggcaatggatttatgagtcttcttacttataaggtttttagcctttacttttctattcaatgtgggacatataactc 37894841  T
Q  108 acacttgtacacaa 121  Q
    ||| ||| ||||||    
T  37894842 acatttgcacacaa 37894855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 16590978 - 16590881
Alignment:
Q  21 aaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactctttt-atccgacgtgggacatataactcacacttgtacac 119  Q
    ||||||||||||| ||| ||||||||||| ||||||||      ||||||||||||||| |||| ||  || ||||||||||||||||||||||| ||||    
T  16590978 aaaaccttaaggcaatgtgtttatgggtcctcttactt------tgttcaacctttactttttttatttgatgtgggacatataactcacacttgcacac 16590885  T

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Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 29676622 - 29676543
Alignment:
Q  29 aaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||| ||| ||||||||||  ||| |||||||| |||||||| |||||||||||||||| | ||| |||||||||||||    
T  29676622 aaggcaatgagtttatgggttctctcacttataatgtgttcaatctttactcttttatccaatgtgagacatataactca 29676543  T

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Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 9231356 - 9231242
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||| | ||||| |||||||| |||||| |||| || ||||| ||||||  ||||||||||||||| || |||| ||  || |||||||||||||    
T  9231356 acactcttaaccaaaactttaaggcggtgggttgatggatcctcttatttataatatgttcaacctttacttttctatctgatatgagacatataactca 9231257  T
Q  109 cacttgtacacaaca 123  Q
     ||||  ||||||||    
T  9231256 tacttacacacaaca 9231242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 12910335 - 12910221
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||||| ||||||||||| | |||  |||||  ||||| | |||||||||| ||||||||| |||| ||  |||||| |||| ||||||||||||    
T  12910335 acactcttacccaaaaccttaagacaatgaatttataagtcatttcacttataaggggttcaacctgtacttttccatccgatgtggaacatataactca 12910236  T
Q  109 cacttgtacacaaca 123  Q
     ||||  ||||||||    
T  12910235 aacttacacacaaca 12910221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 28254165 - 28254254
Alignment:
Q  11 actcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacat 100  Q
    |||||||||  |||| ||||||| | | ||||||| ||| |||||||||||| |||||||||||||||| || ||||||| ||| |||||    
T  28254165 actcttaccctaaactttaaggcaaagtgtttatgagtcctcttacttataaagtgttcaacctttacttttctatccgatgtgagacat 28254254  T

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Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 29873586 - 29873703
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||  ||||||||||||| ||| ||||||| ||| ||  ||||||||  ||||||||||  ||| || |||| || ||||||||| ||||     
T  29873586 tcacactcttactcaaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttcaacctccacttttctatctgatgtgggacatgtaaca 29873685  T
Q  107 cacacttgtacacaacaa 124  Q
    ||| |||| |||||||||    
T  29873686 cacccttgcacacaacaa 29873703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 3673120 - 3673075
Alignment:
Q  81 ttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||    
T  3673120 ttttatccaatgtgggacatataactcacacttgcacacaacaaca 3673075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 31385832 - 31385779
Alignment:
Q  21 aaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacct 74  Q
    ||||||||||||| ||||||||||||||| | | |||||||||||| |||||||    
T  31385832 aaaaccttaaggcaatgggtttatgggtcctttcacttataaggtgctcaacct 31385779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 42515078 - 42515005
Alignment:
Q  54 tacttataaggtgttcaacctttactcttttatccgacgtggg----acatataactcacacttgtacacaaca 123  Q
    ||||||||||||||| |||||||||| || ||||||| |||||    ||||||||||||||| || ||||||||    
T  42515078 tacttataaggtgtttaacctttacttttctatccgatgtgggacatacatataactcacacctgcacacaaca 42515005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 6421844 - 6421793
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatctt 54  Q
    |||| |||||||||||| ||||||||||||| || |||||||||||| ||||    
T  6421844 gacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctctt 6421793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 30312897 - 30312831
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacct 74  Q
    |||||| ||||| ||||||||||||  ||  ||||||||||||||| | |||||| |||||||||||    
T  30312897 cacacttttacccaaaaccttaaggaaataagtttatgggtcatctaagttataaagtgttcaacct 30312831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 36784323 - 36784365
Alignment:
Q  21 aaaaccttaaggcgatgggtttatgggtcatcttacttataag 63  Q
    ||||||||||| | | |||||||||||||||||||||||||||    
T  36784323 aaaaccttaagacaaagggtttatgggtcatcttacttataag 36784365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 3672754 - 3672709
Alignment:
Q  81 ttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    |||||| ||| ||||||||||||||||| ||||| |||||||||||    
T  3672754 ttttattcgatgtgggacatataactcatacttgcacacaacaaca 3672709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 41678419 - 41678534
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggac--atataact 106  Q
    ||||||||||  ||||||||||||| | || |||||||||| ||| |||||||| ||||| |||||   || || |||| || ||| |||  ||||||||    
T  41678419 acactcttactcaaaaccttaaggcaaagg-tttatgggtcctctcacttataaagtgtttaacctccccttttctatctgatgtgagacatatataact 41678517  T
Q  107 cacacttgtacacaaca 123  Q
    |||||||| ||||||||    
T  41678518 cacacttgcacacaaca 41678534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 40734300 - 40734268
Alignment:
Q  94 gggacatataactcacacttgtacacaacaaca 126  Q
    |||||||||||||||||||||||||||| ||||    
T  40734300 gggacatataactcacacttgtacacaataaca 40734268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 4e-48; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 17294690 - 17294569
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  17294690 gacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatgtgggacatat 17294591  T
Q  103 aactcacacttgtacacaacaa 124  Q
    ||||||||||||||||||||||    
T  17294590 aactcacacttgtacacaacaa 17294569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 26661567 - 26661690
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  26661567 gacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttactcttttacccgatgtgggacatat 26661666  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  26661667 aactcacacttgtacacaacaaca 26661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 34364620 - 34364497
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||||||||||||| ||||||||||||| ||||||||| || || ||||||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  34364620 gacatcacactcttacccaaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatat 34364521  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  34364520 aactcacacttgcacacaacaaca 34364497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 34365038 - 34364915
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||| ||| |||||||    
T  34365038 gacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatccgatgtgtgacatat 34364939  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  34364938 aactcacacttgcacacaacaaca 34364915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 26661943 - 26662067
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||| ||  ||||| ||||    
T  26661943 gacaccacactcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttactcttttatctgatatgggatatat 26662042  T
Q  103 aactcacacttgtacacaacaacat 127  Q
    |||||||||||||||||||||||||    
T  26662043 aactcacacttgtacacaacaacat 26662067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 41142473 - 41142361
Alignment:
Q  15 ttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  41142473 ttaccaaaaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttg 41142374  T
Q  115 tacacaacaacat 127  Q
     ||| ||||||||    
T  41142373 cacagaacaacat 41142361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 41157488 - 41157367
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||  ||||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||||||||    
T  41157488 gacaccacactcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttactcttttatctgatgtgggacatat 41157389  T
Q  103 aactcacacttgtacacaacaa 124  Q
    |||||||||||| |||||||||    
T  41157388 aactcacacttgcacacaacaa 41157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 37556224 - 37556101
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactctttt-atccgacgtgggacata 101  Q
    |||| |||||||||||| ||||||||||||| |||||||||||| || ||||||||||||| ||||||||||||||| |||| |||||| ||||||||||    
T  37556224 gacaccacactcttacccaaaaccttaaggctatgggtttatgg-tcctcttacttataagatgttcaacctttactatttttatccgatgtgggacata 37556126  T
Q  102 taactcacacttgtacacaacaaca 126  Q
    |||||||||||||||||||||||||    
T  37556125 taactcacacttgtacacaacaaca 37556101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 41157104 - 41156981
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||| || ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  41157104 gacaccacactcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgttatgggacatat 41157005  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    || ||||||||| |||||||||||    
T  41157004 aattcacacttgcacacaacaaca 41156981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 44290511 - 44290614
Alignment:
Q  11 actcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcaca 110  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  44290511 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcaca 44290610  T
Q  111 cttg 114  Q
    ||||    
T  44290611 cttg 44290614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 44290882 - 44290981
Alignment:
Q  15 ttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  44290882 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttg 44290981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 38804406 - 38804527
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||||| ||||||||||||  |||||||||||| || |||||||||||| ||||||||||||||||||||||| ||| ||||||| |||||||||    
T  38804406 acactcttacccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaacctttactcttttattcgatgtgggacgtataactca 38804505  T
Q  109 cacttgtacacaacaacataaa 130  Q
    |||||||| ||||||| |||||    
T  38804506 cacttgtaaacaacaatataaa 38804527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 41184489 - 41184593
Alignment:
Q  22 aaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaa 121  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||    
T  41184489 aaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaa 41184588  T
Q  122 caaca 126  Q
    |||||    
T  41184589 caaca 41184593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 3550833 - 3550722
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  3550833 gacaccacactcttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatat 3550734  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  3550733 aactcacacttg 3550722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 11977393 - 11977270
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||||||||||||| |||||||||||||  | |||||||| ||  |||||||||||||||||||||| |||||| ||||| |||| |||||||||||    
T  11977393 gacatcacactcttacccaaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaacatttactgttttacccgatgtgggacatat 11977294  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||||||||| |||||    
T  11977293 aactcacacttgtacacagcaaca 11977270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 22077545 - 22077660
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| | | ||||||||||| ||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||    
T  22077545 cacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataactc 22077644  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  22077645 acacttgcacacaaca 22077660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 31767210 - 31767329
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| |||||||||||||  | |||| ||||||| ||||||||||||||||||||||||||||| |||||||||| |||| |||||||||     
T  31767210 tcacactcttacccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtggaacatataacc 31767309  T
Q  107 cacacttgtacacaacaaca 126  Q
    |||||||| |||||||||||    
T  31767310 cacacttgcacacaacaaca 31767329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 41759596 - 41759485
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||| |||||||    
T  41759596 gacaccacactcttacccaaaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaacttttactattttatccgatgtgtgacatat 41759497  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  41759496 aactcacacttg 41759485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 14318980 - 14318875
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| || | |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  14318980 gacaccacactcttacccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaacctttactattttatccgacgtggaacatat 14318881  T
Q  103 aactca 108  Q
    ||||||    
T  14318880 aactca 14318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 34649544 - 34649428
Alignment:
Q  10 cactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcac 109  Q
    |||||||||| |||||||||||||  | |||||||||||  |   |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34649544 cactcttacccaaaaccttaaggcattaggtttatgggttcttgcacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcac 34649445  T
Q  110 acttgtacacaacaaca 126  Q
    ||||||| |||||||||    
T  34649444 acttgtatacaacaaca 34649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 29798312 - 29798189
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||| | || |||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| | || ||||||||    
T  29798312 gacaccacactcttatccaagaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatccaatgtaggacatat 29798213  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| | |||||||||    
T  29798212 aactcacacttgcatacaacaaca 29798189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 32594761 - 32594872
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| || || ||||||||    
T  32594761 gacaccacactcttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtaggacatat 32594860  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  32594861 aactcacacttg 32594872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 3875381 - 3875497
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||| ||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||     
T  3875381 cacattcttacctaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttacttttttatccgatgtgtgacatataactg 3875480  T
Q  108 acacttgtacacaacaa 124  Q
    || |||| |||||||||    
T  3875481 actcttgcacacaacaa 3875497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 3537649 - 3537752
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||| | |||||||||| |||| ||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||     
T  3537649 cacactcttacccaaaaccttaagccaatgggtttataggtcctcttactcataaggtgttcaacctttactattttatccgatgtgggacatataacta 3537748  T
Q  108 acac 111  Q
    ||||    
T  3537749 acac 3537752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 5320016 - 5320131
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||||| ||||||||||||| ||| ||||||||||| ||| |||||||||||||||||| |||||| || ||||||| |||| ||||||||||||    
T  5320016 acactcttacccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatataactca 5320115  T
Q  109 cacttgtacacaacaa 124  Q
    |||||| | |||||||    
T  5320116 cacttgcatacaacaa 5320131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 39066245 - 39066368
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||| | ||||||||||| | |||  |||||||||||||||| ||||||||||||||||||||||| || ||||||| |||| | ||||    
T  39066245 gacaccacactcttatccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaacctttacttttctatccgatgtggaatatat 39066344  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  39066345 aactcacacttgcacacaacaaca 39066368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 5575212 - 5575110
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||| | |||||||||| || |||| ||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  5575212 cacactcttatccaaaaccttaaagctatggatttataggtcctcttacttataaggtgttcaacctttactcttctatccgacgtgggacatataattc 5575113  T
Q  108 aca 110  Q
    |||    
T  5575112 aca 5575110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 50052068 - 50052178
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||| |||||   || |||||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  50052068 gacaccacactcttacccaaaactttaagaaaataggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatat 50052167  T
Q  103 aactcacactt 113  Q
    |||||||||||    
T  50052168 aactcacactt 50052178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 66525 - 66638
Alignment:
Q  11 actcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcaca 110  Q
    ||||||||| ||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||||| || |||||||  ||| ||||||||||||||    
T  66525 actcttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaacctttacttttctatccgatatggaacatataactcaca 66624  T
Q  111 cttgtacacaacaa 124  Q
    |||| |||||||||    
T  66625 cttgcacacaacaa 66638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 3537226 - 3537303
Alignment:
Q  37 gggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  3537226 gggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttg 3537303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 40082514 - 40082398
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| |||  ||||||  || ||||||||||||||||||||||||||||| |||||||||| || |||||||||||||    
T  40082514 cacactcttacccaaaaccttaaggcaatgaatttatga-tcctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactc 40082416  T
Q  108 acacttgtacacaacaac 125  Q
    |||||||  |||||||||    
T  40082415 acacttgcgcacaacaac 40082398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 48588540 - 48588644
Alignment:
Q  10 cactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcac 109  Q
    |||||||||| ||||||||||||| |||  |||| ||||| ||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||    
T  48588540 cactcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacctttactattttatccgatgtcggacatagaactcac 48588639  T
Q  110 acttg 114  Q
    |||||    
T  48588640 acttg 48588644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 9956022 - 9955911
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggttta-tgggtcatcttacttataaggtgttcaacctttac-tcttttatccgacgtgggacat 100  Q
    ||||||||||||||||| ||||||||||||| || |||||| |||||| |||||||||||| ||||||||||||||| | ||||||| || |||||||||    
T  9956022 gacatcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctttactttttttatctgatgtgggacat 9955923  T
Q  101 ataactcacact 112  Q
    ||||||||||||    
T  9955922 ataactcacact 9955911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 66137 - 66254
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttc-aacctttactcttttatccgacgtgggacat-ataac 105  Q
    |||||||||||| ||||||||||||| || |||||||||||| ||||||||||||||||||| |||||||||| || ||||||| ||| ||||| || ||    
T  66137 cacactcttacccaaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtgagacatgattac 66236  T
Q  106 tcacacttgtacacaaca 123  Q
    ||||||||| ||||||||    
T  66237 tcacacttgcacacaaca 66254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 37850680 - 37850768
Alignment:
Q  38 ggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    |||||||||||  |||||||||||||||||||||||| |||| |||||| ||| ||||||||||||||||||||||| |||||||||||    
T  37850680 ggtttatgggttctcttacttataaggtgttcaacctctactgttttatgcgatgtgggacatataactcacacttgcacacaacaaca 37850768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 45084457 - 45084378
Alignment:
Q  41 ttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacaca 120  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| |||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 37555842 - 37555721
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| | || |||| || || |||||||||||| || ||||||||| ||| |||||||||| ||||||| |||    
T  37555842 gacaccacactcttacccaaaaccttaaggctaaggatttaagg-tcctcttacttataatgtattcaaccttcactattttatccgatgtgggacttat 37555744  T
Q  103 aactcacacttgtacacaacaac 125  Q
    ||||||||||| |||||||||||    
T  37555743 aactcacacttttacacaacaac 37555721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 24600359 - 24600479
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||  ||||||||||| | ||| ||||||| ||  ||||||||||||  ||||||||||||||| || |||||||  ||||||||||    
T  24600359 gacaccacactcttacacaaaaccttaagacaatgagtttatgagttctcttacttataatatgttcaacctttacttttctatccgatatgggacatat 24600458  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||||||||||| ||||||||    
T  24600459 aactcacacttgcacacaaca 24600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 21378118 - 21378209
Alignment:
Q  35 atgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||| || |||||||  |||||||||||||| ||||||| |||||||||||    
T  21378118 atgggtttatgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaacaaca 21378209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 45494019 - 45494135
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataa----ggtgttcaacctttactcttttatccgacgtgggac 98  Q
    |||| |||||||||| | ||||| ||||||| |||||||||||| ||||||||||||||     ||||||||||||||||| |||||||||| |||||||    
T  45494019 gacaccacactcttatccaaaactttaaggcaatgggtttatggatcatcttacttatatatatggtgttcaacctttactattttatccgatgtgggac 45494118  T
Q  99 atat-aactcacacttg 114  Q
    |||| ||||||||||||    
T  45494119 atataaactcacacttg 45494135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 44043817 - 44043893
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttact 79  Q
    |||| |||||||||||| |||| |||||| | |||||||||||||||||||||||||||||||||||||| ||||||    
T  44043817 gacaccacactcttacccaaaatcttaagacaatgggtttatgggtcatcttacttataaggtgttcaacatttact 44043893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 44685551 - 44685449
Alignment:
Q  22 aaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaa-cctttactcttttatccgacgtgggacatataactcacacttgtacaca 120  Q
    |||| ||||||| ||| |||||| |||| ||||||||||||||| ||||| |||||||| || |||||||  |||||||||||||||||||||| |||||    
T  44685551 aaacattaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 44685452  T
Q  121 aca 123  Q
    |||    
T  44685451 aca 44685449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 24132049 - 24132150
Alignment:
Q  22 aaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaa 121  Q
    |||||||||||| ||| |||||||| ||  |||| ||||||||||||||||||||||| || ||||||| | ||||||||||||||||| ||| | ||||    
T  24132049 aaaccttaaggcaatgagtttatggatccccttatttataaggtgttcaacctttacttttctatccgatgagggacatataactcacagttgcatacaa 24132148  T
Q  122 ca 123  Q
    ||    
T  24132149 ca 24132150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 30630690 - 30630803
Alignment:
Q  10 cactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcac 109  Q
    |||||||||| ||||| ||||||| ||| ||||||||||  |||||||||||| ||||  |||||||| | |||||||||| ||| ||||||||| ||||    
T  30630690 cactcttacccaaaactttaaggcaatgtgtttatgggttctcttacttataaagtgtcaaacctttaattttttatccgatgtgagacatataaatcac 30630789  T
Q  110 acttgtacacaaca 123  Q
    ||||| ||| ||||    
T  30630790 acttgcacataaca 30630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 35154150 - 35154210
Alignment:
Q  69 caacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaacataa 129  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  35154150 caacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaacataa 35154210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 45839744 - 45839617
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttc-----aacctttactcttttatccgacgtggga 97  Q
    |||| |||| ||||||| |||||||||||||  |   |||||||||| |||||||||||||||||||     |||||||| | || ||||||| ||||||    
T  45839744 gacaccacaatcttacccaaaaccttaaggcattacatttatgggtcttcttacttataaggtgttcgattcaacctttatt-ttctatccgatgtggga 45839646  T
Q  98 catataactcacacttgtacacaacaaca 126  Q
    ||||||||||| |||||||||||||||||    
T  45839645 catataactcatacttgtacacaacaaca 45839617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 5528811 - 5528902
Alignment:
Q  15 ttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||| |||||||||||   ||| ||||||| ||| ||||| ||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  5528811 ttacccaaaaccttaagaaaatgagtttatgagtcctcttatttataagatgttcaacctttactcttttatccgatgtgagacatataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 19283505 - 19283620
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||| | ||||||||||||||||| ||||||| ||| ||| | ||| || ||| |||||||  ||| || ||||||  ||||||||||||||||    
T  19283505 cacactcttatccaaaaccttaaggcgatgagtttatgtgtcctctcatttacaaagtgctcaacctccacttttctatccggtgtgggacatataactc 19283604  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  19283605 acacttgcacacaaca 19283620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 22077159 - 22077242
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccga 90  Q
    ||||||||||| | ||||||||| ||| ||| ||||||||||| ||||||||||||||| ||||||||||||| || |||||||    
T  22077159 tcacactcttatccaaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaacctttacttttctatccga 22077242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 22793388 - 22793270
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcga-tgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataac 105  Q
    ||||||||||||  |||||| |||||| | ||||||||||| || ||| |||||||| || |||||||| |||| || ||| ||| ||||||||||||||    
T  22793388 tcacactcttactcaaaaccgtaaggcaaatgggtttatggatcctctcacttataaagttttcaacctctacttttctatacgatgtgggacatataac 22793289  T
Q  106 tcacacttgtacacaacaa 124  Q
    |||||||||  ||||||||    
T  22793288 tcacacttgctcacaacaa 22793270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 22077879 - 22077991
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    ||||||||||||  |||||||| ||| ||| ||||||||||| ||||||||||||| ||||||||||||| | || |||||||  |   |||||||||||    
T  22077879 cacactcttaccccaaacctta-ggctatgagtttatgggtcctcttacttataagatgttcaacctttatttttctatccgatttaaaacatataactc 22077977  T
Q  108 acacttgtacacaa 121  Q
    ||||||| ||||||    
T  22077978 acacttgcacacaa 22077991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 32168748 - 32168843
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||| ||||| ||||||||||||||| |||      |||||||||||||||||||| ||||||||     ||||||||||||||    
T  32168748 cacactcttacccaaaacctcaaggcaatgggtttatgggtcctct------taaggtgttcaacctttactattttatcc-----gggacatataactc 32168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 1188638 - 1188753
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||| ||||| |||||||||| || ||| ||||||| ||| ||| ||||||||  | ||||||||  ||| || |||||||  ||| |||||||||||    
T  1188638 cacacttttacccaaaaccttaaagcaatgagtttatgagtcttctcacttataaaatattcaacctccacttttctatccgatatggaacatataactc 1188737  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  1188738 acacttgcacacaaca 1188753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 50469180 - 50469246
Alignment:
Q  57 ttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaaca 123  Q
    |||||| |||||||||||||||| | ||||| || || |||||||||||||||||||| ||||||||    
T  50469180 ttataaagtgttcaacctttactttattatctgatgtaggacatataactcacacttgcacacaaca 50469246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 4266872 - 4266940
Alignment:
Q  48 tcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgta 116  Q
    ||||||||||| ||| ||||||||| ||||||||||||||  | || |||||||||||||||| |||||    
T  4266872 tcatcttacttctaatgtgttcaacatttactcttttatctaatgtaggacatataactcacatttgta 4266940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 4956300 - 4956218
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccg 89  Q
    ||||||| ||||| ||||| |||  || ||| |||||||| || ||||||||||||| ||||||||||||||| || ||||||    
T  4956300 tcacacttttacctaaaactttagagcaatgagtttatggatcctcttacttataagatgttcaacctttacttttctatccg 4956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 4878864 - 4878796
Alignment:
Q  55 acttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaaca 123  Q
    ||||||||  ||||||| ||| ||| |||||||||| |||| |||||||||||||| ||| ||||||||    
T  4878864 acttataaaatgttcaagcttcactattttatccgatgtggaacatataactcacaattgcacacaaca 4878796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 1187413 - 1187527
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||| ||||  |||| |||||||  ||| ||||||||||| ||| ||||||||  |||| |||||  ||| || ||| ||| ||| ||||||||| |    
T  1187413 tcacacttttactcaaaatcttaaggtaatgagtttatgggtcttctcacttataaaatgtttaacctccacttttatattcgatgtgagacatataatt 1187512  T
Q  107 cacacttgtacacaa 121  Q
    |||||||| ||||||    
T  1187513 cacacttgcacacaa 1187527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 31877307 - 31877262
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatct 53  Q
    |||||||||||| |||||||||||  |||| |||||||||||||||    
T  31877307 cacactcttacctaaaaccttaagatgatgagtttatgggtcatct 31877262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 41184152 - 41184197
Alignment:
Q  22 aaaccttaaggcgatgggtttatgggtcatcttacttataaggtgt 67  Q
    |||||||||||| |||||||||||| || |||||||||||| ||||    
T  41184152 aaaccttaaggcaatgggtttatggatcctcttacttataaagtgt 41184197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 559 - 682
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  559 gacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatat 658  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||| ||||||||||    
T  659 aactcacacttgtgcacaacaaca 682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 230 - 298
Alignment:
Q  46 ggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    |||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  230 ggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttg 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 6e-47; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 2377867 - 2377744
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  2377867 gacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatat 2377768  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||| ||||||||||    
T  2377767 aactcacacttgtgcacaacaaca 2377744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 2578488 - 2578610
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  2578488 gacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccg-tgtgggacatat 2578586  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  2578587 aactcacacttgtacacaacaaca 2578610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 2579917 - 2580040
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||| ||||||| |||||||||||||  |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  2579917 gacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttactcttttatccgatgtgggacatat 2580016  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  2580017 aactcacacttgcacacaacaaca 2580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 16107791 - 16107668
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||| ||| |||||||||||||||||| |||||||||| |||||||||| |||  ||||||    
T  16107791 gacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaacctttacttttttatccgatgtgacacatat 16107692  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  16107691 aactcacacttgtacacaacaaca 16107668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 26544162 - 26544051
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  26544162 gacatcacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattttatccgatgtgggacatat 26544063  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  26544062 aactcacacttg 26544051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 29518616 - 29518505
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  29518616 gacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 29518517  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  29518516 aactcacacttg 29518505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 29519033 - 29518922
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  29519033 gacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 29518934  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  29518933 aactcacacttg 29518922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 32741292 - 32741181
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  32741292 gacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 32741193  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  32741192 aactcacacttg 32741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 16455015 - 16454897
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||| || |||||||| |||||||    
T  16455015 cacactcttacccaaaaccttaaggcaataggtttatgggtcctattacttataaggtgttcaacctttactcttttatctgatgtgggacacataactc 16454916  T
Q  108 acacttgtacacaacaaca 126  Q
    ||| |||||||||||||||    
T  16454915 acatttgtacacaacaaca 16454897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 16454683 - 16454563
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||| | |||| |||||||| ||||||||||||||| |||||||||||||||||||||| |||| ||||||||| || |||||||| |||||||    
T  16454683 cacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttattcttttatctgatgtgggacacataactc 16454584  T
Q  108 acacttgtacacaacaacata 128  Q
    |||||||||||||||||||||    
T  16454583 acacttgtacacaacaacata 16454563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 2378239 - 2378128
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||| ||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  2378239 gacaccacattcttacctaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 2378140  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  2378139 aactcacacttg 2378128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 3409372 - 3409261
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  3409372 gacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatat 3409273  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  3409272 aactcacacttg 3409261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 32460629 - 32460748
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  32460629 tcacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgatgtgggacatataact 32460728  T
Q  107 cacacttgtacacaacaaca 126  Q
    ||||| | | ||||||||||    
T  32460729 cacacctttgcacaacaaca 32460748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 35210312 - 35210206
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  35210312 cacactcttacccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactc 35210213  T
Q  108 acacttg 114  Q
    |||||||    
T  35210212 acacttg 35210206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 3415571 - 3415462
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||  || |||||||||||    
T  3415571 gacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatgtgatgtgggacatat 3415472  T
Q  103 aactcacact 112  Q
    ||||||||||    
T  3415471 aactcacact 3415462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 16108154 - 16108053
Alignment:
Q  25 ccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaa 124  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  16108154 ccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaacaa 16108055  T
Q  125 ca 126  Q
    ||    
T  16108054 ca 16108053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 10074408 - 10074528
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| || ||||||| ||||||| | |    
T  10074408 gacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggacctct 10074507  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||||||||||| ||||||||    
T  10074508 aactcacacttgcacacaaca 10074528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 3058339 - 3058228
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| |||||||||||| || || |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  3058339 gacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccgatgtgggacatat 3058240  T
Q  103 aactcacacttg 114  Q
    |||| |||||||    
T  3058239 aactaacacttg 3058228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 14748388 - 14748494
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| |||||||||| || ||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  14748388 cacactcttacccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacatataactc 14748487  T
Q  108 acacttg 114  Q
    |||||||    
T  14748488 acacttg 14748494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 10074036 - 10074156
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||| ||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||| || ||||||| |||||| ||||    
T  10074036 gacaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatgtgggatatat 10074135  T
Q  103 aactcacacttgtacacaaca 123  Q
    ||||||| |||| ||||||||    
T  10074136 aactcacccttgcacacaaca 10074156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 1950234 - 1950353
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||  |||||||||||||  | | ||||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  1950234 tcacactcttactcaaaaccttaaggcattagatttatggctcctcttacttgtaaggtgttcaacctttactcttttatccgatgtgggacatataact 1950333  T
Q  107 cacacttgtacacaacaaca 126  Q
    ||||||| ||| ||||||||    
T  1950334 cacacttatacgcaacaaca 1950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 5832072 - 5832194
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||| ||||| |||| ||||||| | ||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  5832072 gacaccacacttttacccaaaatcttaagggg-tggctttatgggtcctcttacttataaggtgttcaacctttactcttttatccaatgtgggacatat 5832170  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||| |||||||| ||||||||||    
T  5832171 aacttacacttgtgcacaacaaca 5832194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 593759 - 593865
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||| ||||| |||||||||||||  | |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  593759 cacactattacccaaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaactc 593858  T
Q  108 acacttg 114  Q
    |||||||    
T  593859 acacttg 593865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 1127468 - 1127366
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||| ||||| |||| |||||| |||||||||    
T  1127468 cacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttacccgatgtgggatatataactc 1127369  T
Q  108 aca 110  Q
    |||    
T  1127368 aca 1127366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 6999846 - 6999966
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||| | |||||||||||||  || |||||||| || |||||| ||||||||||||||| |||||| |||||||||| || |||||||||||||    
T  6999846 cacactcttatccaaaaccttaaggcagtgagtttatggatcctcttacatataaggtgttcaacttttacttttttatccgatgtaggacatataactc 6999945  T
Q  108 acacttgtacacaacaacata 128  Q
    |||||| ||||||| ||||||    
T  6999946 acacttatacacaataacata 6999966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 1846861 - 1846750
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||| | ||||||||||||| |||| |||||||||  ||||||||||||||||||||||||||||| |||||||||| ||| ||||||     
T  1846861 gacaccacactcttatccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttactattttatccgatgtgagacatag 1846762  T
Q  103 aactcacacttg 114  Q
    || |||||||||    
T  1846761 aattcacacttg 1846750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 2843663 - 2843544
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatggg-tcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    |||||||||||| ||||||||||||| ||| ||||||||| || |||||||||||||||||||||| |||| | |||||||||| |||  ||||||||||    
T  2843663 cacactcttacccaaaaccttaaggcaatgagtttatggggtcctcttacttataaggtgttcaacttttattattttatccgatgtgaaacatataact 2843564  T
Q  107 cacacttgtacacaacaaca 126  Q
    |||| |||| ||||||||||    
T  2843563 cacaattgtgcacaacaaca 2843544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 10073661 - 10073779
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||| |||||| | ||| |||||||| || |||||||||||||||||||||||||||  ||||| ||||| |||||||||||    
T  10073661 gacaccacactcttacccaaaatcttaagccaatgagtttatggatcctcttacttataaggtgttcaaccttta--cttttctccgatgtgggacatat 10073758  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||| ||||||| ||||||||    
T  10073759 aactaacacttgcacacaaca 10073779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 3409773 - 3409662
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||  | ||||| ||||||||||||||| ||||||||||||| |||||||| |||||| ||||||| || |||| ||||||    
T  3409773 gacaccacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttacttataagatgttcaacttttactattttatctgatgtggtacatat 3409674  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  3409673 aactcacacttg 3409662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 2579203 - 2579273
Alignment:
Q  56 cttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  2579203 cttataaggtgttcaacttttactcttttatccgatgtgggacatataactaacacttgtacacaacaaca 2579273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 9062400 - 9062517
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||| ||||| ||||| ||||| | ||| ||||||| ||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||    
T  9062400 cacacttttacccaaaac-ttaagacaatgagtttatgagtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactc 9062498  T
Q  108 acacttgtacacaacaaca 126  Q
    ||| || ||||||| ||||    
T  9062499 acatttatacacaataaca 9062517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 10911679 - 10911558
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttac-tcttttatccgacgtgggacata 101  Q
    |||||||||||||||   ||||| ||||||| ||| ||||||| ||| |||||||||||||||||||||||||||| | ||||||| || || |||||||    
T  10911679 gacatcacactcttattcaaaactttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttttttatctgatgtaggacata 10911580  T
Q  102 taactcacacttgtacacaaca 123  Q
    ||||||||||||| | ||||||    
T  10911579 taactcacacttgcatacaaca 10911558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 2578880 - 2578999
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||  ||| |||||||| || ||||| ||||||||| |||||| |||||| |||||||||| | |||||||||    
T  2578880 gacaccacactcttacccaaaaccttaaggtaatgagtttatggatcctcttatttataaggtattcaacatttact-ttttatccgatgagggacatat 2578978  T
Q  103 aactcacacttgtacacaaca 123  Q
    || |||||||||  |||||||    
T  2578979 aaatcacacttgctcacaaca 2578999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 2579549 - 2579645
Alignment:
Q  15 ttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacac 111  Q
    ||||| ||||||||||||| ||| ||||||||| | ||||||||||||||| | | ||||||||| |||| ||||| ||||||||||||||||||||    
T  2579549 ttacccaaaaccttaaggcaatgagtttatgggccctcttacttataaggtatccgacctttacttttttgtccgatgtgggacatataactcacac 2579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 6071240 - 6071124
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||| | |||| |||||||| ||| |||||||| |||||| |||||||| |||||||||||  ||| || ||| | | ||||||||||||||||    
T  6071240 cacactcttatccaaaatcttaaggcaatgagtttatggatcatctcacttataaagtgttcaacctccacttttctattcaatgtgggacatataactc 6071141  T
Q  108 acacttgtacacaacaa 124  Q
    ||||||| |||||||||    
T  6071140 acacttgcacacaacaa 6071124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 8482039 - 8481919
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| | |||||| |||||||||||  ||| || |||| || || ||||||||    
T  8482039 gacaccacactcttacccaaaatcttaaggcaatgagtttatgagtcatctcatttataaagtgttcaacctccacttttatatctgatgt-ggacatat 8481941  T
Q  103 aactcacacttgtacacaacaa 124  Q
    |||||||||||| |||||||||    
T  8481940 aactcacacttgcacacaacaa 8481919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 5958648 - 5958771
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||||||||||||  || ||||| ||||| | ||| ||||||| ||  ||||| ||||||||||||||||||||||| |||||||||| ||   ||||||    
T  5958648 gacatcacactctatcccaaaactttaagacaatgagtttatgagttctcttatttataaggtgttcaacctttactgttttatccgatgtaacacatat 5958747  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||| ||| |||| ||||||    
T  5958748 aactcacaattgcacaccacaaca 5958771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 12092527 - 12092647
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||| ||||||  ||||||||||||| ||| |||||||| || ||| |||||||| ||| |||||||  ||| || ||||||| ||||||||| |    
T  12092527 gacaccacagtcttactcaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgctcaacctccacttttctatccgatgtgggacatct 12092626  T
Q  103 aactcacacttgtacacaaca 123  Q
    ||| ||| |||| ||||||||    
T  12092627 aacacacccttgcacacaaca 12092647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 2975665 - 2975567
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacata 101  Q
    |||||||||||||||   ||||| ||||| | | || ||||||||||||||| ||||||||||||||||| |||||| || |||  || ||||||||||    
T  2975665 gacatcacactcttattcaaaactttaagacaaaggatttatgggtcatcttgcttataaggtgttcaacatttacttttctatttgatgtgggacata 2975567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 14789284 - 14789325
Alignment:
Q  38 ggtttatgggtcatcttacttataaggtgttcaacctttact 79  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  14789284 ggtttatgggtcctcttacttgtaaggtgttcaacctttact 14789325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 35210551 - 35210498
Alignment:
Q  43 atgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtggg 96  Q
    ||||||| ||||||||| ||||| ||||||||||||| |||||||||| |||||    
T  35210551 atgggtcctcttacttacaaggtattcaacctttactattttatccgatgtggg 35210498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 7588358 - 7588390
Alignment:
Q  92 gtgggacatataactcacacttgtacacaacaa 124  Q
    ||||||||||||||||||||||| |||||||||    
T  7588358 gtgggacatataactcacacttgcacacaacaa 7588390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 22605305 - 22605345
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggt 48  Q
    |||| ||||||| ||||||||||||| ||||||||||||||    
T  22605305 cacattcttacccaaaaccttaaggcaatgggtttatgggt 22605345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 30359384 - 30359261
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| ||| |||||||    
T  30359384 gacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgagacatat 30359285  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  30359284 aactcacacttgtacacaacaaca 30359261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 3038340 - 3038458
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||||||||||||||| | |||||||||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  3038340 cacactcttacccaaaaccttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttactattttatccgatgtgggacatataactc 3038439  T
Q  108 acacttgtacacaacaaca 126  Q
    |||||||||||||||||||    
T  3038440 acacttgtacacaacaaca 3038458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 34834989 - 34834866
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||||| |||||||| | |||||||||||    
T  34834989 gacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataaggtgtttaacctttactattttatccaatgtgggacatat 34834890  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  34834889 aactcacacttgtacacaacaaca 34834866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 9608853 - 9608738
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    ||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||  |||||||||||||||    
T  9608853 cacactcatacccaaaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatgggacatataactc 9608754  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  9608753 acacttgcacacaaca 9608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 25561864 - 25561984
Alignment:
Q  7 tcacactcttacca-aaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataac 105  Q
    |||||||||||||  ||||||||||| | ||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  25561864 tcacactcttaccccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacgtttactcttttatccgatgtgggacatataac 25561963  T
Q  106 tcacacttgtacacaacaaca 126  Q
    ||||||||||| |||||||||    
T  25561964 tcacacttgtagacaacaaca 25561984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 30359722 - 30359598
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||| |||||||  ||||||||||| ||| |||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  30359722 gacaccacactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttcaacttttactcttttatctgatgtgagacatat 30359623  T
Q  103 aactcacacttgtacacaacaacat 127  Q
    |||||||||||||||||||||||||    
T  30359622 aactcacacttgtacacaacaacat 30359598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 70323 - 70441
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| |||||||||||||  |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||    
T  70323 tcacactcttacctaaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactcttttatccgatgtgggacatataact 70422  T
Q  107 cacacttgtacacaacaaca 126  Q
    |||  |||||||||||||||    
T  70423 cac-tttgtacacaacaaca 70441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 9309468 - 9309345
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| ||||||||||||  | |||||||||| ||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  9309468 gacaccacactcttacccgacaccttaaggcaatgagtttaagggtcctcttacttataaggtgttcaacatttactcttttatccgatgtgggacatat 9309369  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  9309368 aactcacacttgcacacaacaaca 9309345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 33113412 - 33113539
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||| |||||||| ||| ||||||||||| |||||||||||||  |||||||||||||| |||||||||| || ||||||||    
T  33113412 gacaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttactattttatccgatgtaggacatat 33113511  T
Q  103 aactcacacttgtacacaacaacataaa 130  Q
    |||||| |||||||||||||||||||||    
T  33113512 aactcaaacttgtacacaacaacataaa 33113539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 34835322 - 34835199
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  34835322 gacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatat 34835223  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||| |||||||||| |||||    
T  34835222 aactcacccttgtacacagcaaca 34835199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 147559 - 147441
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||| ||||||| || |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  147559 cacactcttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaacctttactcttttatccgatgtgggacatataactc 147460  T
Q  108 acacttgtacacaacaaca 126  Q
    ||||||  || ||||||||    
T  147459 acacttacacgcaacaaca 147441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 1513965 - 1514078
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||| ||||| ||||||||||||  ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1513965 cacacttttacccaaaaccttaaggttatgggtttaagggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggatatataactc 1514064  T
Q  108 acacttgtacacaa 121  Q
    | ||||||||||||    
T  1514065 atacttgtacacaa 1514078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 3669800 - 3669689
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  3669800 gacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatat 3669701  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  3669700 aactcacacttg 3669689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 34835588 - 34835464
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatc-cgacgtgggacata 101  Q
    |||| |||||||||||| ||||| ||||||| ||| ||||||||||| |||||||||||||||||| |||||||||| |||||||  |||||||||||||    
T  34835588 gacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatcgggacgtgggacata 34835489  T
Q  102 taactcacacttgtacacaacaaca 126  Q
    |||||||| |||||||||| |||||    
T  34835488 taactcacccttgtacacagcaaca 34835464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 34835854 - 34835730
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatc-cgacgtgggacata 101  Q
    |||| |||||||||||| ||||| ||||||| ||| ||||||||||| |||||||||||||||||| |||||||||| |||||||  |||||||||||||    
T  34835854 gacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatcgggacgtgggacata 34835755  T
Q  102 taactcacacttgtacacaacaaca 126  Q
    |||||||| |||||||||| |||||    
T  34835754 taactcacccttgtacacagcaaca 34835730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 45121704 - 45121823
Alignment:
Q  6 atcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataac 105  Q
    |||||||||||||  |||||||||||||  | ||||||||| || |||||||||||||||| ||||||||||||||||||||||| |||||||| | |||    
T  45121704 atcacactcttactcaaaaccttaaggctgtaggtttatggatcctcttacttataaggtgatcaacctttactcttttatccgatgtgggaca-acaac 45121802  T
Q  106 tcacacttgtacacaacaaca 126  Q
    |||||||||||||||||||||    
T  45121803 tcacacttgtacacaacaaca 45121823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 3670173 - 3670062
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||  || |||||||||||| || ||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  3670173 gacaccacactcttacccaaaaccttaaggaaataggtttatgggtcctcatacttataaggtgttaaacctttactattttatccgatgtgggacatat 3670074  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  3670073 aactcacacttg 3670062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 6876912 - 6877031
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggac-atataact 106  Q
    |||||||||||| |||||| |||| | ||| || |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||||||    
T  6876912 cacactcttacccaaaaccctaagacaatgagtgtatgggtcatcttatttataaggtgttcaacctttacttttttatccgatgtgggactatataact 6877011  T
Q  107 cacacttgtacacaacaaca 126  Q
    |||||||| |||||||||||    
T  6877012 cacacttgcacacaacaaca 6877031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 8918813 - 8918932
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| ||||||||||| | || |||||||||||| |||||||||||| ||||||||||||||||||  |||| || ||||||||| |||||    
T  8918813 tcacactcttacccaaaaccttaagtcaataggtttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaact 8918912  T
Q  107 cacacttgtacacaacaaca 126  Q
    |||||||| |||||||||||    
T  8918913 cacacttgcacacaacaaca 8918932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 40518691 - 40518577
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| ||||||||||| |  |||||||||||||| ||||| ||||||||||||||||||||||| || |||| || |||||||||||||||    
T  40518691 tcacactcttacccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttacttttctatctgatgtgggacatataact 40518592  T
Q  107 cacacttgtacacaa 121  Q
    |||||||| ||||||    
T  40518591 cacacttgaacacaa 40518577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 45122102 - 45122220
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||||   ||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  45122102 gacaccacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatccgatgtgagacatat 45122201  T
Q  103 aactcacacttgtacacaa 121  Q
    |||||||||||| ||||||    
T  45122202 aactcacacttgcacacaa 45122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 5420760 - 5420643
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    |||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||| ||||||||||||||| || ||||||| |||||||||||||      
T  5420760 tcacactcttacaaaaaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttactattctatccgatgtgggacatataata 5420661  T
Q  107 cacacttgtacacaacaa 124  Q
    |||||||| | |||||||    
T  5420660 cacacttgcatacaacaa 5420643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 37544535 - 37544660
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||| |  |||| |||||||||| |||| ||||||| |||||||||||||||| |||||||||| ||| ||| |||    
T  37544535 gacaccacactcttacccaaaaccttaaagtaatggatttatgggtcctctttcttataatgtgttcaacctttactattttatccgatgtgcgacttat 37544634  T
Q  103 aactcacacttgtacacaacaacata 128  Q
    ||||||||||||| ||||||||||||    
T  37544635 aactcacacttgtgcacaacaacata 37544660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 9482654 - 9482770
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    ||||||||||   |||| ||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||     
T  9482654 cacactcttatacaaaatctttaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatcccatgtggaacatataact- 9482752  T
Q  108 acacttgtacacaacaaca 126  Q
     ||||||||||||||||||    
T  9482753 -cacttgtacacaacaaca 9482770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 9483232 - 9483319
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccga 90  Q
    |||| |||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9483232 gacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccga 9483319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 30441198 - 30441083
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataa----ggtgttcaacctttactcttttatccgacgtgggac 98  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||| | ||||||||||||    ||||||||||||||||| ||||| |||| |||||||    
T  30441198 gacaccacactcttacccaaaaccttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaacctttactattttagccgatgtgggac 30441099  T
Q  99 atataactcacacttg 114  Q
    ||||||||||||||||    
T  30441098 atataactcacacttg 30441083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 43274823 - 43274947
Alignment:
Q  2 ggacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacata 101  Q
    ||||| |||||||||||  ||||||||||| | || |||||||||||| ||||||||||||  | ||||||||||||||||||||| || |||  |||||    
T  43274823 ggacaccacactcttactcaaaaccttaagacaataggtttatgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacata 43274922  T
Q  102 taactcacacttgtacacaacaaca 126  Q
    |||||||||||| ||||||||||||    
T  43274923 taactcacacttatacacaacaaca 43274947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 40518179 - 40518061
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttac--tcttttatccgacgtgggacatataac 105  Q
    |||||||||||| |||||||||||||  ||||||||||||||   ||||||||||||||||||||||||||  | |||||||| | |||| |||||||||    
T  40518179 cacactcttacccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaacctttacttttttttatccaatgtggaacatataac 40518080  T
Q  106 tcacacttgtacacaacaa 124  Q
    ||||||||| |||||||||    
T  40518079 tcacacttgaacacaacaa 40518061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 45123108 - 45122996
Alignment:
Q  12 ctcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacac 111  Q
    |||||||| |||||||||||   || ||||||||||||||||||||||  ||||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  45123108 ctcttacccaaaaccttaagaaaataggtttatgggtcatcttactta--aggtgtttaacctttactattttatccgatgtgggacatataactcacac 45123011  T
Q  112 ttgtacacaacaaca 126  Q
    ||| ||||| |||||    
T  45123010 ttgcacacagcaaca 45122996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 41972253 - 41972151
Alignment:
Q  21 aaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacaca 120  Q
    ||||| ||| ||| ||||||||||||||| | | ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| |||||    
T  41972253 aaaactttatggcaatgggtttatgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacaca 41972154  T
Q  121 aca 123  Q
    |||    
T  41972153 aca 41972151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 45121960 - 45122066
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||| ||||| |||| |||||||| ||| ||||||| ||| |||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||    
T  45121960 cacactgttacccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggacatataactc 45122059  T
Q  108 acacttg 114  Q
    |||||||    
T  45122060 acacttg 45122066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 8794189 - 8794101
Alignment:
Q  38 ggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    |||||||| ||| ||||||||||||| |||||||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  8794189 ggtttatgagtcctcttacttataagatgttcaacatttattcttttatccgatgtgagacatataactcacacttgtacacaacaaca 8794101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 1013916 - 1014027
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||  |||||  |||||| |||||||||| |||| ||||||||||| |||||||||| |||||| |||||||||| |||| ||||||    
T  1013916 gacaacacactcttactcaaaactctaaggcaatgggtttattggtcctcttacttatagggtgttcaacttttactattttatccgatgtggaacatat 1014015  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  1014016 aactcacacttg 1014027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 9309084 - 9308970
Alignment:
Q  11 actcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtg--ggacatataactca 108  Q
    |||||| || |||||||| |||| ||||||||||||||| ||||||||||||  |||||||| |||||||||||||| || |||  ||||||||||||||    
T  9309084 actcttgcccaaaacctttaggcaatgggtttatgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactca 9308985  T
Q  109 cacttgtacacaaca 123  Q
    |||||| ||||||||    
T  9308984 cacttgcacacaaca 9308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 9609193 - 9609122
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttact 79  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9609193 cacactcttaccgaaaacattaaggcgatgggtttatgggtcatcttacttataagatgttcaacctttact 9609122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 41416241 - 41416322
Alignment:
Q  28 taaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcac 109  Q
    ||||| ||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  41416241 taaggtgataggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 18372988 - 18373098
Alignment:
Q  12 ctcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacac 111  Q
    |||||||| |||||||   ||| ||| ||||||| ||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  18372988 ctcttacccaaaacct---ggcaatgagtttatgagtcctcttatttataaggtgttcaacctttactattttatccgaagtgggacatataaatcacac 18373084  T
Q  112 ttgtacacaacaaca 126  Q
     ||||||||||||||    
T  18373085 -tgtacacaacaaca 18373098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 20130553 - 20130454
Alignment:
Q  11 actcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcaca 110  Q
    ||||||||| |||||| |||||  |||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||| ||||||    
T  20130553 actcttacctaaaaccgtaaggttatgggtttatggatcatcttactta-aaggtgttcaacttttactcttttatccgatgtgagacatatatctcaca 20130455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 1014290 - 1014401
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||| ||||||  | | ||||| ||||| ||||||||||||||||||||||||||||| ||||||| || ||  |||||||    
T  1014290 gacaccacactcttacccaaaactttaaggtaacgagtttacgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatat 1014389  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  1014390 aactcacacttg 1014401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 40579551 - 40579662
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||| || ||  ||||||||||| ||||||||||||||||||||||||||||| |||||||| |  ||  ||||||    
T  40579551 gacaccacactcttacctaaaaccttaaagcaataagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatatgaaacatat 40579650  T
Q  103 aactcacacttg 114  Q
    || |||||||||    
T  40579651 aattcacacttg 40579662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 18372044 - 18372142
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    |||||||||||| |||||||||| || ||| |||||||| || ||||||||||||||||||||||||||||| ||||||  || |||| ||||||||||    
T  18372044 cacactcttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaacctttactattttattggatgtggtacatataact 18372142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 20870618 - 20870731
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggac--at 100  Q
    |||| |||||||||| | |||| ||||||||  |||||||||||||| ||||||||||||| ||||||||||||||| ||||||| || |||| ||  ||    
T  20870618 gacaccacactcttatccaaaatcttaaggcagtgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgatgtggaacatat 20870717  T
Q  101 ataactcacacttg 114  Q
    ||||||||||||||    
T  20870718 ataactcacacttg 20870731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 45122732 - 45122650
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccga 90  Q
    ||||||| |||| ||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  45122732 cacactcatacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccga 45122650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 18372342 - 18372411
Alignment:
Q  44 tgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacactt 113  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  18372342 tgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactt 18372411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 18372785 - 18372854
Alignment:
Q  44 tgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacactt 113  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  18372785 tgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactcacactt 18372854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 9507890 - 9507769
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttact---cttttatccgacgtg--ggacatat 102  Q
    |||||||||||| ||||||||||||  ||||||||||| ||| ||||||||||||||| |||||||||||||   ||||||||| |  ||  ||| ||||    
T  9507890 cacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattcaacctttactgtacttttatccaatatggaggagatat 9507791  T
Q  103 aactcacacttgtacacaacaa 124  Q
    |||||||||||| |||||||||    
T  9507790 aactcacacttgcacacaacaa 9507769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 18371711 - 18371807
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||||||||||||||| |||||||||     ||||||||||||||| |||||||||| ||| ||||||||||||    
T  18371711 cacactcttacccaaaaccttaaggc-atgggtttatgggtcttcttacttaa----tgttcaacctttactattttatccgatgtgtgacatataactc 18371805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 18372656 - 18372762
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| |||||||   ||| ||||||||||| ||| ||||||||||||| ||||||||||||||| ||||||||||  ||| |||||||| ||    
T  18372656 cacactcttacccaaaacct---ggcaatgggtttatgagtcctcttacttataag-tgttcaacctttactattttatccgaaatggaacatataaatc 18372751  T
Q  108 acacttgtaca 118  Q
    |||||||||||    
T  18372752 acacttgtaca 18372762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 18380067 - 18380171
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||  ||||||||||||   ||||||||| || |  |||||||||||||||||||||||||||| |||||| ||| |||||| |||||||||    
T  18380067 cacactcttactcaaaaccttaaggtagtgggtttataggcccccttacttataaggtgttcaacctttactattttattcgatgtgggatatataactc 18380166  T
Q  108 acact 112  Q
    |||||    
T  18380167 acact 18380171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 32640583 - 32640682
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||||| ||||||||||||| |||||||||| |||| |||||| ||     |||||||||||||||||||||||||| ||| |||| ||||||||    
T  32640583 acactcttacccaaaaccttaaggcaatgggtttatcggtcctcttaccta-----tgttcaacctttactcttttatccgatgtgagacagataactca 32640677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 4154716 - 4154831
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||  ||| ||| ||||||||||| | | |||||||| |||||||||||  ||| || |||| || ||||||||||||||||    
T  4154716 cacactcttacccaaaaccttggggcaatgagtttatgggtcctttcacttataaagtgttcaacctccacttttctatcagatgtgggacatataactc 4154815  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  4154816 acacttgcacacaaca 4154831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 25561737 - 25561792
Alignment:
Q  51 tcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25561737 tcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataact 25561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 32305585 - 32305502
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgac 91  Q
    |||||||||| | |||| |||||||  |||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  32305585 cacactcttatccaaaatcttaaggtaatgggtttataggtcttcttacttataaggtgttcaacctttactattttatccgac 32305502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 147933 - 147819
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| || |||||||||||         |||| | |||||||| |||||| ||||||| || |||||||||||    
T  147933 gacaccacactcttacccaaaaccttaaggcaataggtttatgggt---------tatatgttgttcaacatttacttttttatcagatgtgggacatat 147843  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  147842 aactcacacttgcacacaacaaca 147819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 4154326 - 4154446
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||||||||| |||||| ||||  ||||||| ||| ||||||||||| ||| |||||||| |||||||||||  ||| || |||| || || ||||||||    
T  4154326 gacatcacacacttacccaaaatattaaggcaatgagtttatgggtc-tctcacttataaagtgttcaacctccacttttctatctgatgtaggacatat 4154424  T
Q  103 aactcacacttgtacacaacaa 124  Q
    |||||||| ||| |||||||||    
T  4154425 aactcacatttgcacacaacaa 4154446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 5915980 - 5915863
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||||||| |||||    ||| ||||| ||| |||||  |||||||| | || ||||||||    
T  5915980 gacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctta----taaagtgttaaac-tttacatttttatccaatgtaggacatat 5915886  T
Q  103 aactcacacttgtacacaacaac 125  Q
    |||||||||||| ||||||||||    
T  5915885 aactcacacttgcacacaacaac 5915863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 12283979 - 12283867
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||| | ||||||||||| |  || ||||||| ||||| |||||| |||| | |||||| |||||| ||||||| |||||||||||||||||| |    
T  12283979 acactcttatccaaaaccttaagact-tgagtttatgtgtcattttacttttaagatattcaacatttacttttttatctgacgtgggacatataactta 12283881  T
Q  109 cacttgtacacaac 122  Q
    |||||| |||||||    
T  12283880 cacttgcacacaac 12283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 3037776 - 3037865
Alignment:
Q  26 cttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggac--atataactcacactt 113  Q
    |||||| | ||||||||||| ||| |||||||||||||||||||||| |||||| ||| |||||| |||| ||  |||||||||||||||    
T  3037776 cttaagacaatgggtttatgagtcctcttacttataaggtgttcaacatttactatttcatccgatgtggaacatatataactcacactt 3037865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 6731953 - 6731906
Alignment:
Q  67 ttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||    
T  6731953 ttcaacctttactattttatccgatgtgggacatataactcacacttg 6731906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 9620739 - 9620841
Alignment:
Q  21 aaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacaca 120  Q
    |||| |||||||| ||| ||||||||||| ||| |||||||| ||| ||||| | |||| || |||| |  ||| ||||||||||||||||||| |||||    
T  9620739 aaaatcttaaggcaatgagtttatgggtcctctcacttataaagtgatcaacttctacttttctatctgttgtgagacatataactcacacttgcacaca 9620838  T
Q  121 aca 123  Q
    |||    
T  9620839 aca 9620841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 33832055 - 33831971
Alignment:
Q  39 gtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaaca 123  Q
    |||||| |||| |||||||||||| ||||||||| | |||| || | | | ||||| ||||||||||||||||||| ||||||||    
T  33832055 gtttataggtcctcttacttataaagtgttcaacttctacttttctcttcaacgtgagacatataactcacacttgcacacaaca 33831971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 5274888 - 5274770
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||||||||||||  |||| |||||||| |||  |||||||||| ||  | |||||| ||||||||||| | || |||||| | | || | ||||||    
T  5274888 gacatcacactcttactcaaaatcttaaggcaatgattttatgggtcttcccatttataaagtgttcaacctctccttttttattcaatgtagaacatat 5274789  T
Q  103 aactcacacttgtacacaa 121  Q
    |||||| ||||| ||||||    
T  5274788 aactcatacttgcacacaa 5274770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 18372485 - 18372526
Alignment:
Q  72 cctttactcttttatccgacgtgggacatataactcacactt 113  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  18372485 cctttactattttatccgatgtgggacatataactcacactt 18372526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 43398164 - 43398225
Alignment:
Q  51 tcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacact 112  Q
    ||||| ||||||||||||||||||||||| || |||||||  || || ||||||||||||||    
T  43398164 tcttatttataaggtgttcaacctttacttttctatccgatatgagatatataactcacact 43398225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 20995502 - 20995566
Alignment:
Q  59 ataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaaca 123  Q
    |||| |||||||||||  ||| ||||||| || ||| ||||||||||||||||||| ||||||||    
T  20995502 ataaagtgttcaacctccacttttttatctgatgtgagacatataactcacacttgcacacaaca 20995566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 18373236 - 18373291
Alignment:
Q  24 accttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttact 79  Q
    |||||||| | ||||||| |||| || ||||| |||||||||||||||||||||||    
T  18373236 accttaagacaatgggttaatggatcctcttatttataaggtgttcaacctttact 18373291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 6651552 - 6651510
Alignment:
Q  67 ttcaacctttactcttttatccgacgtgggacatataactcac 109  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||    
T  6651552 ttcaacctttactattttatccgatgtgagacatataactcac 6651510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 12156704 - 12156745
Alignment:
Q  4 acatcacactcttaccaaaaaccttaaggcgatgggtttatg 45  Q
    |||||||||||||||| ||||||||||| | |||||||||||    
T  12156704 acatcacactcttacccaaaaccttaagacaatgggtttatg 12156745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 52634784 - 52634666
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  52634784 tcacactcttacccaaaaccttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaacctttactgttttatccgatgtgggacatataact 52634686  T
Q  107 cacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||    
T  52634685 cacacttgtacacaacaaca 52634666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 35946635 - 35946515
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||| ||||| ||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  35946635 gacaccacacttttacccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggacatat 35946536  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||||||||||||||||||||    
T  35946535 aactcacacttgtacacaaca 35946515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 37991022 - 37991145
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||| |||||||| | ||| |||||||    
T  37991022 gacaccacactcttacccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttactattttatccaatgtgagacatat 37991121  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  37991122 aactcacacttgtacacaacaaca 37991145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 43346836 - 43346959
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||||||  ||||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  43346836 gacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatctgatgtgggacatat 43346935  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  43346936 aactcacacttgtacacaacaaca 43346959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 29644952 - 29645070
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||     
T  29644952 cacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataactt 29645051  T
Q  108 acacttgtacacaacaaca 126  Q
    ||||||| |||||||||||    
T  29645052 acacttgcacacaacaaca 29645070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 54017861 - 54017982
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||||||| | |||||||| ||| |||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  54017861 gacaccacactcttacccaaaaccttaaggcgttaggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatat 54017960  T
Q  103 aactcacacttgtacacaacaa 124  Q
    |||||||||||| |||||||||    
T  54017961 aactcacacttgcacacaacaa 54017982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 42342437 - 42342557
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| ||||||||||| | |||| |||||||||| |||||||||||||||||| |||||||||||||||||| || |||||||||||||||    
T  42342437 tcacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttataaggtgttgaacctttactcttttatcggatgtgggacatataact 42342536  T
Q  107 cacacttgtacacaacaacat 127  Q
    |||||||| ||||||||||||    
T  42342537 cacacttgcacacaacaacat 42342557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 29644631 - 29644750
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||| | ||||||||||||||  ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  29644631 cacactcttacccaaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactc 29644730  T
Q  108 acacttgtacacaacaacat 127  Q
    ||||||| |||||| |||||    
T  29644731 acacttgcacacaaaaacat 29644750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 37990684 - 37990807
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||| ||| |||||||||||||||||||||| |||||| |||||||||| |||| ||||||    
T  37990684 gacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatat 37990783  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  37990784 aactcacacttgtacacaacaaca 37990807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 32462945 - 32463069
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacc-tttactcttttatccgacgtgggacata 101  Q
    |||| |||||||||||  ||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||    
T  32462945 gacaccacactcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacata 32463044  T
Q  102 taactcacacttgtacacaacaaca 126  Q
    |||||||||||||||||||||||||    
T  32463045 taactcacacttgtacacaacaaca 32463069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 45901827 - 45901703
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacc-tttactcttttatccgacgtgggacata 101  Q
    |||| |||||||||||||||||| ||||||| ||| ||||||| ||| ||||||||||||||||||||||| |||  |||||||||||| ||||||||||    
T  45901827 gacaccacactcttaccaaaaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacata 45901728  T
Q  102 taactcacacttgtacacaacaaca 126  Q
    |||||||||||||||||||||||||    
T  45901727 taactcacacttgtacacaacaaca 45901703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 54018243 - 54018367
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||||| |||||||||||||||||| |  ||||||||    
T  54018243 gacaccacactcttacccaaaaccttaaggcgttaggtttatgggtcctcttacttataaggtgttcaatctttactcttttatccgatgcaggacatat 54018342  T
Q  103 aactcacacttgtacacaacaacat 127  Q
    |||||||||||| ||| ||||||||    
T  54018343 aactcacacttgcacataacaacat 54018367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 12114607 - 12114730
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| |||||| ||||    
T  12114607 gacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggatatat 12114706  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||| ||||||| |||||||||||    
T  12114707 aacttacacttgcacacaacaaca 12114730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 15772967 - 15772844
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||| | |||||||||| || ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  15772967 gacaccacactcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacatttactcttttatccgatatgggacatat 15772868  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||| ||||||    
T  15772867 aactcacacttgcacacgacaaca 15772844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 15773305 - 15773182
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||||||||||||| ||||| ||||||| ||| | ||||| ||| ||||||||||||| |||||||| ||||||||||||| ||| |||||||||||    
T  15773305 gacatcacactcttacccaaaactttaaggcaatgagcttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggacatat 15773206  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  15773205 aactcacacttgcacacaacaaca 15773182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 22304682 - 22304571
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  22304682 gacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttactattttatccgatgtgggacatat 22304583  T
Q  103 aactcacacttg 114  Q
    | ||||||||||    
T  22304582 agctcacacttg 22304571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 32462608 - 32462727
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacc-tttactcttttatccgacgtgggacatataact 106  Q
    |||||||||| | |||||||||| || || ||||||||| |||||||||||||||||||||||||| |||||||||| || ||| |||||||||||||||    
T  32462608 cacactcttatccaaaaccttaaagcaataggtttatggatcatcttacttataaggtgttcaaccttttactctttcattcgatgtgggacatataact 32462707  T
Q  107 cacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||    
T  32462708 cacacttgtacacaacaaca 32462727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 32589816 - 32589694
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | |||||||  | |||||||||||    
T  32589816 gacatcgcactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatcttatgtgggacatat 32589717  T
Q  103 aactcacacttgtacacaacaaca 126  Q
     ||||||||||| |||||||||||    
T  32589716 -actcacacttgcacacaacaaca 32589694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 33803302 - 33803417
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| || ||||||| || ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||    
T  33803302 cacactcttacccaataccttaatgcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatccgatgtgggacatataactc 33803401  T
Q  108 acacttgtacacaaca 123  Q
    ||| ||| ||||||||    
T  33803402 acaattgcacacaaca 33803417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 39935000 - 39935104
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||||||||||||  ||||| ||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  39935000 gacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatat 39935099  T
Q  103 aactc 107  Q
    |||||    
T  39935100 aactc 39935104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 25739474 - 25739593
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| ||||||| || || ||| ||||||||||| ||||||||||| | |||||||| |||||| |||||||||| |||||||||||||||    
T  25739474 tcacactcttacccaaaacctaaaagcaatgagtttatgggtcctcttacttatatgatgttcaacttttactattttatccgatgtgggacatataact 25739573  T
Q  107 cacacttgtacacaacaaca 126  Q
    |||||||| |||||||||||    
T  25739574 cacacttgcacacaacaaca 25739593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 39389183 - 39389072
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||| | ||||||||||||||| ||||| || |||||||||||||||||||| |||||||||| || ||||||||    
T  39389183 gacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggacatat 39389084  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  39389083 aactcacacttg 39389072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 49336732 - 49336855
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| | ||| ||||| | ||||||||||||||| |||||||||||||||| |||||||||||| || ||||||| ||| ||||| |    
T  49336732 gacaccacactcttacccagaactttaagactatgggtttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgagacatgt 49336831  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  49336832 aactcacacttgtacacaacaaca 49336855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 21832395 - 21832508
Alignment:
Q  10 cactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcac 109  Q
    |||||||||| ||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||    
T  21832395 cactcttacccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactcac 21832494  T
Q  110 acttgtacacaaca 123  Q
    ||||| ||| ||||    
T  21832495 acttgcacataaca 21832508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 8328017 - 8327897
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||||||  |  ||||||||||  ||||||||||||| | |||| ||||||||||||||||||| |||||||||||    
T  8328017 gacaccacactcttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtgggacatat 8327918  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||||||||||| ||||||||    
T  8327917 aactcacacttgcacacaaca 8327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 31190122 - 31190006
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||||||        |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  31190122 gacaccacactcttacccaaaaccttaaggc--------tatgggtcctctaacttataaggtgttcaacctttactcttttatccgatgtgggacatat 31190031  T
Q  103 aactcacacttgtacacaacaacat 127  Q
     ||||||||||| ||||||||||||    
T  31190030 cactcacacttgcacacaacaacat 31190006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 3135499 - 3135631
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatggg--tcatcttacttata-----aggtgttcaacctttactcttttatccgacgtgg 95  Q
    |||| |||||||||| | ||||||||||||| |||||||||||||  || ||||||| |||     ||||||||||| |||||||||||||| || ||||    
T  3135499 gacaccacactcttatctaaaaccttaaggcaatgggtttatgggggtcctcttactaatataataaggtgttcaacttttactcttttatctgaggtgg 3135598  T
Q  96 gacatataactcacacttgtacacaacaacata 128  Q
    |||||||||||||||||||||||||||||||||    
T  3135599 gacatataactcacacttgtacacaacaacata 3135631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 41359815 - 41359929
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| || ||||||| |||||    |||||||    
T  41359815 cacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactattgtatccgatgtggg----ataactc 41359910  T
Q  108 acacttgtacacaacaaca 126  Q
    ||||||| |||||||||||    
T  41359911 acacttgcacacaacaaca 41359929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 45395698 - 45395819
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||| ||||| | |||||||||||| || |||||||||||| ||||| ||||||||||||||||| ||| |||||| ||||    
T  45395698 gacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaacctttactcttttattcgatgtgggatatat 45395797  T
Q  103 aactcacacttgtacacaacaa 124  Q
    |||| ||||||| |||||||||    
T  45395798 aacttacacttgcacacaacaa 45395819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 33175711 - 33175829
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttat---gggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataa 104  Q
    |||||||||||| ||||||||||||| ||| ||||||   ||||  ||||||||||||||||||||||||||||| || |||| || ||| |||||||||    
T  33175711 cacactcttacccaaaaccttaaggctatgagtttattatgggttctcttacttataaggtgttcaacctttacttttctatctgatgtgagacatataa 33175810  T
Q  105 ctcacacttgtacacaaca 123  Q
    |||||||||||||||||||    
T  33175811 ctcacacttgtacacaaca 33175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 25755475 - 25755384
Alignment:
Q  35 atgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    |||| |||||| ||| ||||||||||||||| ||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||    
T  25755475 atggatttatgagtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataactcacacttgtacacaacaaca 25755384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 53118026 - 53118144
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||||| |||| |||||||| |||||||| ||  || ||| ||||||||||||||||||||||||||||||||||||  ||| ||||||||||||    
T  53118026 acactcttacccaaaatcttaaggcaatgggttt-tgaatcctctcacttataaggtgttcaacctttactcttttatccgatatggaacatataactca 53118124  T
Q  109 cacttgtacacaacaacata 128  Q
    ||||||  ||||||||||||    
T  53118125 cacttgcccacaacaacata 53118144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 3135118 - 3135237
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||  ||||||||| |||  |||||||||||||  | |||||||||||||||||||| |||||| |||||||||| |||||||||||    
T  3135118 gacaccacactcttactcaaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaacatttactattttatccgatgtgggacatat 3135217  T
Q  103 aactcacacttgtacacaacaa 124  Q
    ||||  ||||||||||||||||    
T  3135218 aact--cacttgtacacaacaa 3135237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 22304000 - 22304117
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||| | ||||||||||||| |||||||||||||||  ||||||||||||       ||||||||| ||||||| || |||||||||||    
T  22304000 gacaccacactcttatccaaaaccttaaggcaatgggtttatgggtccgcttacttataag-------acctttactattttatctgatgtgggacatat 22304092  T
Q  103 aactcacacttgtacacaacaacat 127  Q
    |||||||||||||||||||||||||    
T  22304093 aactcacacttgtacacaacaacat 22304117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 42342140 - 42342258
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||| ||||||| ||| ||||||||||||||  || ||| ||||||||||||||||| |||| |||||| | ||    
T  42342140 cacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggcattgaacatttactcttttatccgatgtggaacatatgaatc 42342239  T
Q  108 acacttgtacacaacaaca 126  Q
    ||||||| |||||||||||    
T  42342240 acacttgcacacaacaaca 42342258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 1634366 - 1634483
Alignment:
Q  10 cactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacc-tttactcttttatccgacgtgggacatataactca 108  Q
    |||||||||| ||||||||||| | ||||||||||||||| |||||||||||| ||||| |||| |||| | || ||||||| |||||||||||||||||    
T  1634366 cactcttacccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataactca 1634465  T
Q  109 cacttgtacacaacaaca 126  Q
    |||||| ||||| |||||    
T  1634466 cacttgcacacagcaaca 1634483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 4823768 - 4823657
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||| |||||||| ||| ||||||||||| || ||||||||||||||| ||| |||||| |||||||||| ||| ||| |||    
T  4823768 gacaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtgagacttat 4823669  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  4823668 aactcacacttg 4823657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 39914365 - 39914242
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||| | ||||  |||||||  | |||||||||||| ||||| |||||||||||||||||| |||| ||||||| || ||| |||||||    
T  39914365 gacaccacactcttatccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttcaacctctactgttttatctgatgtgagacatat 39914266  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  39914265 aactcacacttgcacacaacaaca 39914242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 53577477 - 53577354
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| || |||||||||| ||  |||||||| ||  |||| || |||| ||||||||||||||| |||||||||| ||| |||||||    
T  53577477 gacaccacactcttacccaagaccttaaggcaatatgtttatggatccacttatttttaagatgttcaacctttactgttttatccgatgtgtgacatat 53577378  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  53577377 aactcacacttgcacacaacaaca 53577354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 50612534 - 50612608
Alignment:
Q  40 tttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    |||||| ||| ||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  50612534 tttatgagtcctcttacttataaggtgttcaatctttactattttatccgatgtgggacatataactcacacttg 50612608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 11662058 - 11661941
Alignment:
Q  10 cactcttacc-aaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    |||||||||| |||||||||||||| || |||||||| | | ||| |||| ||||||||||||||||||||||||||||| | ||||| ||| |||||||    
T  11662058 cactcttacccaaaaaccttaaggcaattggtttatgaggcctctcacttttaaggtgttcaacctttactcttttatccaatgtggggcatttaactca 11661959  T
Q  109 cacttgtacacaacaaca 126  Q
    |||||  | |||||||||    
T  11661958 cacttacatacaacaaca 11661941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 33362349 - 33362460
Alignment:
Q  14 cttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtggga---catataactcaca 110  Q
    |||||| |||| |||||||  ||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||| || ||   |||||||||||||    
T  33362349 cttacccaaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaacctttattattttatccgacatgagatatcatataactcaca 33362448  T
Q  111 cttgtacacaac 122  Q
    ||| ||||||||    
T  33362449 cttatacacaac 33362460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 11661600 - 11661525
Alignment:
Q  51 tcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||||||||||| |||| |||| ||||| |||||||||| ||||||||||||||||||||||||||||| |||||    
T  11661600 tcttacttataagatgtttaaccgttactattttatccgatgtgggacatataactcacacttgtacacaccaaca 11661525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 42584867 - 42584970
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| ||||||||| |  |||| |||||| | || ||||||||| || ||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  42584867 gacaccacactctttctcaaaatcttaagacaattggtttatggatcctcttacttataaggtgttcaatctttactcttctatccgatgtgggacatat 42584966  T
Q  103 aact 106  Q
    ||||    
T  42584967 aact 42584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 43346706 - 43346640
Alignment:
Q  60 taaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||||||||||| |||||||||||    
T  43346706 taaggtgttcaacctttactattttatccgatgtgggacatacaactcacacttgcacacaacaaca 43346640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 9240239 - 9240142
Alignment:
Q  26 cttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaaca 123  Q
    |||||||  |||| |||||||||| |||||||||||||||||||| | ||||||  | ||||||| |||| |||||||||||||||||| ||||||||    
T  9240239 cttaaggtaatggatttatgggtcctcttacttataaggtgttcagcttttacttctctatccgatgtggaacatataactcacacttgcacacaaca 9240142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 47964568 - 47964683
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| || |||||||||||| ||| |||||||  | |||||||||  ||  || ||||||| | |||||||| |||||    
T  47964568 cacactcttacccaaaaccttaaggcaataggtttatgggtcctctcacttatatagcgttcaacctccacatttctatccgatgcgggacatacaactc 47964667  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  47964668 acacttgcacacaaca 47964683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 51886638 - 51886563
Alignment:
Q  39 gtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||||||||| ||||||||||| | ||||||||||||||| |||||| ||| ||| |||||||||||||||||||    
T  51886638 gtttatgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataactcacacttg 51886563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 7767380 - 7767469
Alignment:
Q  24 accttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacactt 113  Q
    |||||||| | ||||||||||| ||| ||||| |||||| |||| ||||||||||| || ||||||| ||||||||||||||||| ||||    
T  7767380 accttaagacaatgggtttatgagtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatataactcagactt 7767469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 22304301 - 22304248
Alignment:
Q  61 aaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  22304301 aaggtgttcaacctttactattttatccgatgtgggacatataactcacacttg 22304248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 44160595 - 44160710
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||| ||||||||||| ||||||| | |||||||||||| || ||||| ||||||||||||||||||||| | |||||||| |  ||  ||||||||||     
T  44160595 cacattcttaccaaaa-ccttaagacaatgggtttatggatcctcttatttataaggtgttcaacctttattgttttatccaatatgaaacatataactg 44160693  T
Q  108 acacttgtacacaacaa 124  Q
    ||||||| | |||||||    
T  44160694 acacttgcatacaacaa 44160710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 37726569 - 37726506
Alignment:
Q  51 tcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||||||||||||| |||||| |||||| |||||||||| ||| |||||||||||||||||||    
T  37726569 tcttacttataaggtattcaacatttactattttatccgatgtgagacatataactcacacttg 37726506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 46546371 - 46546490
Alignment:
Q  4 acatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatata 103  Q
    |||||||||||||||  ||||||||||||| |||||||||||| |  ||| |||||||| |||||||||||  ||  ||  |||| | || |||||||||    
T  46546371 acatcacactcttacacaaaaccttaaggcaatgggtttatggattctctaacttataaagtgttcaacctccacatttcaatccaatgtaggacatata 46546470  T
Q  104 actcacacttgtacacaaca 123  Q
    ||||||||||  ||||||||    
T  46546471 actcacacttacacacaaca 46546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 3384317 - 3384427
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||||| ||||| |||||||  |  ||||||||||| |||| ||||||| ||||| ||||| |||| |||||||  | |||||||||||||||||    
T  3384317 acactcttacccaaaactttaaggcattaagtttatgggtcctcttccttataaagtgtttaacctatactgttttatcatatgtgggacatataactca 3384416  T
Q  109 cacttgtacac 119  Q
    | |||| ||||    
T  3384417 cgcttgcacac 3384427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 39336292 - 39336392
Alignment:
Q  21 aaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacaca 120  Q
    |||||||||| || ||| |||||||| || ||| |||||||| |||||||||||  |   || ||||||| ||||||||||||||||||||||| |||||    
T  39336292 aaaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccgatgtgggacatataactcacacttgcacaca 39336391  T
Q  121 a 121  Q
    |    
T  39336392 a 39336392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 22303709 - 22303759
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttactt 58  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  22303709 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 12749277 - 12749211
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacct 74  Q
    |||||||||| |||||||||||| || || |||||||||||| ||  |||||||| |||||||||||    
T  12749277 cacactcttatcaaaaaccttaatgcaattggtttatgggtcctcacacttataaagtgttcaacct 12749211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 52635048 - 52634990
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtg 66  Q
    |||||||||||| |||| |||||||| ||| ||||||||||| ||||| ||||||||||    
T  52635048 cacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttatttataaggtg 52634990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 12747878 - 12747918
Alignment:
Q  84 tatccgacgtgggacatataactcacacttgtacacaacaa 124  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  12747878 tatccgatgtgggacatataactcacacttgcacacaacaa 12747918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 47964965 - 47965080
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| |||| |||||||| ||||| ||||| | | ||| |||||||   |||| |||||  ||| || ||||||| ||   |||||||||||    
T  47964965 cacactcttacccaaaatcttaaggcaatgggcttatgagccctctcacttatataatgtttaacctccacttttctatccgatgtaaaacatataactc 47965064  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  47965065 acacttgcacacaaca 47965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 54017593 - 54017636
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgg 46  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||    
T  54017593 gacaccacactcttacccaaaaccttaaggcaatgggtttatgg 54017636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 2300008 - 2299968
Alignment:
Q  84 tatccgacgtgggacatataactcacacttgtacacaacaa 124  Q
    |||| ||||||||||||||||| |||||||| |||||||||    
T  2300008 tatctgacgtgggacatataacccacacttgcacacaacaa 2299968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 17731954 - 17731994
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggt 48  Q
    |||||||||||  ||||||||||||| ||||||||||||||    
T  17731954 cacactcttactcaaaaccttaaggcaatgggtttatgggt 17731994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 19033185 - 19033225
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggt 48  Q
    |||||||||||  ||||||||||||| ||||||||||||||    
T  19033185 cacactcttactcaaaaccttaaggcaatgggtttatgggt 19033225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 9e-43; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 54017638 - 54017754
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  54017638 gacatcacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgacgtgggacatat 54017737  T
Q  103 aactcacacttgtacac 119  Q
    |||||||||||| ||||    
T  54017738 aactcacacttgcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 10246032 - 10245909
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||||||  ||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  10246032 gacaccacactcttacccaaaaccttaaggctttgggtttatgg-tcctcttacttataaggtgttcaacctttactcttttatccgatgtggggcatat 10245934  T
Q  103 aactcacacttgtacacaacaacat 127  Q
    |||||||||||| ||||||||||||    
T  10245933 aactcacacttgcacacaacaacat 10245909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 25483449 - 25483326
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| |||||||||||| || ||||||||||||| ||||||||||||||| |||||||||| ||| |||||||    
T  25483449 gacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttactattttatccgatgtgagacatat 25483350  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  25483349 aactcacacttgcacacaacaaca 25483326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 34646692 - 34646815
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||| ||| ||||| |||||||||||||||| |||||| |||||||||| |||||||||||    
T  34646692 gacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtgggacatat 34646791  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  34646792 aactcacacttgtacacaacaaca 34646815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 36572124 - 36572009
Alignment:
Q  11 actcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcaca 110  Q
    ||||| ||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  36572124 actctaacccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactcttttattcgatgtgggacatataactcaca 36572025  T
Q  111 cttgtacacaacaaca 126  Q
    ||||||||||||||||    
T  36572024 cttgtacacaacaaca 36572009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 39404511 - 39404388
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||| |||| || ||||||||||||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||    
T  39404511 gacaccacattcttgcccaaaaccttaaggctataggtttatgggtcctcttacttataaggtgttccacctttactcttttatctgatgtgggacatat 39404412  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||    
T  39404411 aactcacacttgtacacaacaaca 39404388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 52884809 - 52884688
Alignment:
Q  3 gacatcacactcttacca-aaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacata 101  Q
    |||| ||||||||||||  ||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  52884809 gacaccacactcttaccccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaacctttactattttatccgatgtgggacata 52884710  T
Q  102 taactcacacttgtacacaaca 123  Q
    ||||||||||||| ||||||||    
T  52884709 taactcacacttgcacacaaca 52884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 52884982 - 52884877
Alignment:
Q  21 aaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacaca 120  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  52884982 aaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacaca 52884883  T
Q  121 acaaca 126  Q
    ||||||    
T  52884882 acaaca 52884877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 4955365 - 4955483
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||||||  || ||||||||||||    
T  4955365 cacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaaccttaactattttatccgatatgagacatataactc 4955464  T
Q  108 acacttgtacacaacaaca 126  Q
    ||||||| |||||||||||    
T  4955465 acacttgcacacaacaaca 4955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 41707508 - 41707628
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||||||| ||||||| | ||| ||||||||||  | ||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  41707508 gacaccacactcttaccaaaa-ccttaagacaatgagtttatgggttcttttacttatatggtgttcaacctttactcttttatccgatgtgggacatat 41707606  T
Q  103 aactcacacttgtacacaacaa 124  Q
    ||||||||||||||||||||||    
T  41707607 aactcacacttgtacacaacaa 41707628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 36629350 - 36629230
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||| ||| |||||| || ||||||| |||||||||||    
T  36629350 gacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttctatccgatgtgggacatat 36629251  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||||||||||| ||||||||    
T  36629250 aactcacacttgaacacaaca 36629230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 50002539 - 50002415
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||| | |||| |||||||||| ||||||||| || ||||||||||||||||||||||||||| ||| |||||||    
T  50002539 gacaccacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacctttactcttttatccgatgtgagacatat 50002440  T
Q  103 aactcacacttgtacacaacaacat 127  Q
    |||||||||||| | ||||||||||    
T  50002439 aactcacacttgcaaacaacaacat 50002415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 54936309 - 54936188
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| || |||||    ||    
T  54936309 gacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtggg----at 54936214  T
Q  103 aactcacacttgtacacaacaacata 128  Q
    ||||||||||||||||||||||||||    
T  54936213 aactcacacttgtacacaacaacata 54936188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 2740808 - 2740693
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||  |||||||||||||  ||||||||| |||| ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  2740808 cacactcttacgtaaaaccttaaggctctgggtttataggtcctcttacttataaggtgttcaacctttactgttctatccgatgtgggacatataactc 2740709  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  2740708 acacttgcacacaaca 2740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 20825944 - 20825829
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| |  |||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  20825944 cacactcttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataaggtgttcaacctttactcttttatccgatgtggaacatataactc 20825845  T
Q  108 acacttgtacacaaca 123  Q
    ||| ||||||||||||    
T  20825844 acatttgtacacaaca 20825829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 22183312 - 22183431
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||| | ||||||||||||| ||||||||||||||| | ||||||||||  |||||||| ||||||||||||||||| |||||| |||||||||    
T  22183312 cacactcttatccaaaaccttaaggcaatgggtttatgggtccttttacttataaattgttcaacatttactcttttatccgatgtgggatatataactc 22183411  T
Q  108 acacttgtacacaacaacat 127  Q
    ||||||| ||||||||||||    
T  22183412 acacttgcacacaacaacat 22183431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 36608704 - 36608827
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||| | |||| ||||||| || |||||||||| ||||||||||| ||||||||||||||||| || ||||||||    
T  36608704 gacaccacactcttacccaaaaccttaagacaatggatttatggatcctcttacttatgaggtgttcaacttttactcttttatccgatgttggacatat 36608803  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  36608804 aactcacacttgcacacaacaaca 36608827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 50630798 - 50630909
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||| |||||||||| || ||||||||    
T  50630798 gacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactattttatccgatgtaggacatat 50630897  T
Q  103 aactcacacttg 114  Q
    ||||||| ||||    
T  50630898 aactcacgcttg 50630909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 55933167 - 55933278
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| || ||||||||    
T  55933167 gacaccacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacccttactattttatccgatgtaggacatat 55933266  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  55933267 aactcacacttg 55933278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 1731695 - 1731813
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| || |||||||||||| ||||| ||||||| ||||||||||||||| ||||||| || ||||||||||||||||    
T  1731695 cacactcttacccaaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttactgttttatctgatgtgggacatataactc 1731794  T
Q  108 acacttgtacacaacaaca 126  Q
    ||| ||| |||||||||||    
T  1731795 acatttgcacacaacaaca 1731813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 3340920 - 3340802
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||||||||||  |||||||||||||| |||||||||||||||| |||||||||||||||| ||| || | |||||||||    
T  3340920 gacaccacactcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacctttactctttcatctgatgcgggacatat 3340821  T
Q  103 aactcacacttgtacacaa 121  Q
    |||||||||||| ||||||    
T  3340820 aactcacacttgcacacaa 3340802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 22028004 - 22028127
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||| ||||||| ||||||||||||| ||  ||||||||||| ||||||||||||||||||||||||||  | |||||||||| |||||||||||    
T  22028004 gacaccacattcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacctttcgtattttatccgatgtgggacatat 22028103  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    || ||||||||| |||||||||||    
T  22028104 aagtcacacttgcacacaacaaca 22028127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 49880273 - 49880162
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| ||| |||||||| |||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| |||||| | | |||||||||||    
T  49880273 gacaccacgctcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtgggacatat 49880174  T
Q  103 aactcacacttg 114  Q
    ||||||||||||    
T  49880173 aactcacacttg 49880162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 39404126 - 39404013
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| |||||||||| || ||| ||||||| ||| |||||||||||| ||||||||||||||||||||||| | | || |||||||||||||    
T  39404126 cacactcttacccaaaaccttaatgctatgagtttatgagtcctcttacttataaagtgttcaacctttactcttttattcaatgtaggacatataactc 39404027  T
Q  108 acacttgtacacaa 121  Q
    ||||||||||||||    
T  39404026 acacttgtacacaa 39404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 41370464 - 41370359
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||| |||||| |||||| ||||||||||  ||||||||||||||||    
T  41370464 acactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttactattttatccgatttgggacatataactca 41370365  T
Q  109 cacttg 114  Q
    ||||||    
T  41370364 cacttg 41370359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 54109025 - 54108908
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||  ||    
T  54109025 gacaccacactcttacccaaaac-ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggac--at 54108929  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||| ||||||| ||||||||    
T  54108928 aactgacacttgcacacaaca 54108908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 20826330 - 20826210
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||||||||||||| ||||  ||||||| ||||||||||||||  |||||||||||| ||||||||| |||||| |||||||||| |||||||||||    
T  20826330 gacatcacactcttacctaaaatgttaaggctatgggtttatgggttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatat 20826231  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||||||| || |||| ||||    
T  20826230 aactcacatttctacataaca 20826210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 39792903 - 39793023
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| ||| ||||| || || |||| ||||||||||||||||| |||||| || |||| || |||||||||||    
T  39792903 gacaccacactcttacccaaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaacatttacttttctatctgatgtgggacatat 39793002  T
Q  103 aactcacacttgtacacaaca 123  Q
    |||||||||||||||||||||    
T  39793003 aactcacacttgtacacaaca 39793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 2741179 - 2741064
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||| ||||  ||||||||| ||||||||||||||| ||||||||||||| || |||| || ||||||||||||||||    
T  2741179 cacactcttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatataactc 2741080  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||| ||||    
T  2741079 acacttgcacataaca 2741064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 3341241 - 3341118
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||||||||||||| |||| |||||  | |||   ||||||||| |||||||||||| ||||| ||||||||||||||||||| | |||||||||||    
T  3341241 gacatcacactcttacccaaaatcttaaaacaatgatgttatgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatat 3341142  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    |||||||||||| |||||||||||    
T  3341141 aactcacacttgcacacaacaaca 3341118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 44620465 - 44620362
Alignment:
Q  4 acatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatata 103  Q
    |||||||||||||||| ||||||||||||| |||||||||||||   ||||| ||||||||||||||||||||||| |||||||||| |||| |||||||    
T  44620465 acatcacactcttacccaaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttcaacctttactgttttatccgatgtggaacatata 44620366  T
Q  104 actc 107  Q
    ||||    
T  44620365 actc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 44620767 - 44620654
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||||  |||| |||||||||| |||||||||||| ||||||||||| |||| ||| |||||| ||||||||||||||||    
T  44620767 cacactcttacccaaaaccttaaggttatgg-tttatgggtcctcttacttataaagtgttcaacctctactatttcatccgatgtgggacatataactc 44620669  T
Q  108 acacttgtacacaac 122  Q
    ||||||| |||||||    
T  44620668 acacttgcacacaac 44620654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 54017750 - 54017870
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtggg--acatataac 105  Q
    |||||||||||| ||||||||||| | |||||  |||||||| ||||||||||||||||||||||||||||| |||||||||| |||||  | |||||||    
T  54017750 cacactcttacctaaaaccttaagacaatgggaatatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggatatatataac 54017849  T
Q  106 tcacacttgtacacaacaaca 126  Q
    ||||| ||| |||||||||||    
T  54017850 tcacatttgcacacaacaaca 54017870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 16888859 - 16888983
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    ||||||||||||||||| |||||| |||| | ||| |||||| |||  ||||||||||||||| ||||||||||||| || ||||||| |||||||||||    
T  16888859 gacatcacactcttacccaaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaacctttacttttctatccgatgtgggacatat 16888958  T
Q  103 aactcacacttg-tacacaacaaca 126  Q
    ||||||||||||  |||||||||||    
T  16888959 aactcacacttgccacacaacaaca 16888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 49076510 - 49076614
Alignment:
Q  22 aaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaa 121  Q
    |||| ||||| | |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||||| ||||||    
T  49076510 aaactttaagacaatgggtttataggtcctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaa 49076609  T
Q  122 caaca 126  Q
    |||||    
T  49076610 caaca 49076614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 49303014 - 49302907
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttac--ttataaggtgttcaacctttactcttttatccgacgtgggacatataac 105  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||||||  ||||||| ||||||||||||||| ||||||  || ||||||||||||||    
T  49303014 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacctttacttttttatttgatgtgggacatataac 49302915  T
Q  106 tcacactt 113  Q
    ||||||||    
T  49302914 tcacactt 49302907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 3244499 - 3244614
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||| ||||||| ||||| ||||| | ||| ||||||||||| ||||||||||||| ||||||||||||||| || ||||||| ||| ||||||||||||    
T  3244499 cacattcttacccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgagacatataactc 3244598  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  3244599 acacttgcacacaaca 3244614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 4390148 - 4390267
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| |||||||||| || ||| | | | || || ||||||||||||||||||||||||||||||||||||| || |||||| || |||||    
T  4390148 tcacactcttacccaaaaccttaacgcaatgtgctaaaggatcctcttacttataaggtgttcaacctttactcttttatctgatgtgggatatgtaact 4390247  T
Q  107 cacacttgtacacaacaaca 126  Q
    |||||||| |||||||||||    
T  4390248 cacacttgcacacaacaaca 4390267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 43174615 - 43174496
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactc-ttttatccgacgtgggacatataact 106  Q
    |||||||||||| || || ||||||  || |||||||| ||| |||||||||||||||||||||||||||||| ||||||| || ||| | |||||||||    
T  43174615 cacactcttacccaacactttaaggtcataggtttatgtgtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtggcatataact 43174516  T
Q  107 cacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||    
T  43174515 cacacttgtacacaacaaca 43174496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 45489375 - 45489497
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||||||||||||||||||||| |||||   | | |||||| | ||  ||||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  45489375 gacatcacactcttaccaaaaatcttaaacag-taggtttaagagttctcttacttatatggtgttcaacctttactcttttatccgatgtgagacatat 45489473  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    || |||||||||||||||||||||    
T  45489474 aattcacacttgtacacaacaaca 45489497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 50459834 - 50459711
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| ||| |||||||| |||||||||||   ||||||||||| ||| ||||||||||||| ||||||||||||||||||||| |||| |||| ||||||    
T  50459834 gacaccacgctcttacctaaaaccttaagataatgggtttatgagtcctcttacttataagatgttcaacctttactcttttaaccgatgtggaacatat 50459735  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    ||||||||||| | ||| ||||||    
T  50459734 aactcacacttatgcactacaaca 50459711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 18932792 - 18932879
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccga 90  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||| ||||||||||||| ||||||||||    
T  18932792 gacaccacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattcaacctttactattttatccga 18932879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 45496918 - 45496820
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacata 101  Q
    |||| |||||||||||| ||||||||||| | ||| |||||| |||| ||||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  45496918 gacaccacactcttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatccgatgtgggacata 45496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 54741227 - 54741341
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||| | ||||||||||| | ||  || |||||||| ||||||||||||||||||||||||||||| || ||||||| ||| ||||||||| |||    
T  54741227 acactcttatccaaaaccttaagacaatctgtgtatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataattca 54741326  T
Q  109 cacttgtacacaaca 123  Q
    |||||| ||||||||    
T  54741327 cacttgcacacaaca 54741341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 10246436 - 10246340
Alignment:
Q  27 ttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaaca 123  Q
    ||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||  || ||||||||||  ||||||| ||||||||    
T  10246436 ttaaggctatgggtttatgggtcctctaacttataagatgttcaacctttactcttttatccgatttgagacatataacagacacttgcacacaaca 10246340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 32941170 - 32941286
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataact 106  Q
    ||||||||||||| ||||||||||||| ||| ||||||| | | ||||| ||||||||||||||||||||||| || | ||||| ||  |||||||||||    
T  32941170 tcacactcttacccaaaaccttaaggcaatgagtttatgagccctcttatttataaggtgttcaacctttactgttctttccgatgtaagacatataact 32941269  T
Q  107 cacacttgtacacaaca 123  Q
    |||||||| | ||||||    
T  32941270 cacacttgcagacaaca 32941286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 44620361 - 44620285
Alignment:
Q  51 tcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaacat 127  Q
    ||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||| | ||||||||||||||||    
T  44620361 tcttacttataaggtgttcaacctttactattttatcccatgtgggacatataactcatatttgtacacaacaacat 44620285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 3700428 - 3700357
Alignment:
Q  53 ttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaa 124  Q
    |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||    
T  3700428 ttacttataaggtgttcaacatttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 3700357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 44621110 - 44621011
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| ||||||||||| | ||| ||||||| | | ||||||||||||||||||||||||||||| |||||||||| ||||| |||| |||||    
T  44621110 cacactcttacccaaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttcaacctttactgttttatccgatgtgggtcatacaactc 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 49076874 - 49076992
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||| ||| ||||||||||||  ||||||||||||||  ||||||| ||||||||||||||||||||| ||||| || |  ||| ||||||    
T  49076874 gacaccacactctaacccaaaaccttaaggttatgggtttatgggttctcttact-ataaggtgttcaacctttactattttagccaatatggaacatat 49076972  T
Q  103 aactcacacttgtacacaac 122  Q
    |||||||||||| |||||||    
T  49076973 aactcacacttgcacacaac 49076992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 22028412 - 22028537
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaaccttta--ctcttttatccgacgtgggacat 100  Q
    |||| |||||||||||| ||||| ||||| | ||| ||||||||||| ||||||| |||||||||||||||||||   | |||||||||| || ||||||    
T  22028412 gacaccacactcttacccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaacctttatttttttttatccgatgtaggacat 22028511  T
Q  101 ataactcacacttgtacacaacaaca 126  Q
    |||| | ||||||| |||||||||||    
T  22028512 ataagtaacacttgcacacaacaaca 22028537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 54343051 - 54343147
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| ||||||||||||| |||||       ||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  54343051 gacaccacactcttacccaaaaccttaaggcaatggg-------gtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 54343143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 51768115 - 51768225
Alignment:
Q  15 ttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||| ||||||||||| | ||| ||||||| ||| ||||| |||||||||||||||| ||||||||| ||| |||  | |||||||||||||||| |||    
T  51768115 ttacccaaaaccttaagacaatgagtttatgagtcctcttatttataaggtgttcaacatttactcttatattcgatataggacatataactcacatttg 51768214  T
Q  115 tacacaacaac 125  Q
     ||||||||||    
T  51768215 cacacaacaac 51768225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 34004633 - 34004744
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||| | ||||||||||||  ||| ||||||||||| ||||||||||||| ||||||||||||| | |||||||  | ||| ||||||||||||    
T  34004633 cacactcttatcgaaaaccttaagga-atgagtttatgggtcctcttacttataagttgttcaacctttagt-ttttatcatatgtgtgacatataactc 34004730  T
Q  108 acacttgtacacaa 121  Q
    ||||||| ||||||    
T  34004731 acacttgcacacaa 34004744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 16889587 - 16889703
Alignment:
Q  11 actcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcaca 110  Q
    ||||||||| ||||| |||||||  | ||||||||  || ||||||||||||||| ||||||||||||| || |||||||  || |||||||||||||||    
T  16889587 actcttacccaaaactttaaggcagtaggtttatgaatcctcttacttataaggtattcaacctttacttttctatccgatttgagacatataactcaca 16889686  T
Q  111 cttg-tacacaacaaca 126  Q
    ||||  |||||||||||    
T  16889687 cttgccacacaacaaca 16889703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 44621010 - 44620934
Alignment:
Q  51 tcttacttataaggtgttcaacctttactcttttatccgacg-tgggacatataactcacacttgtacacaacaaca 126  Q
    ||||||||||||||||||||||||||||  |||||||||| | |||||||| |||||||||||||| ||||||||||    
T  44621010 tcttacttataaggtgttcaacctttacagttttatccgatgttgggacatctaactcacacttgtccacaacaaca 44620934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 28034337 - 28034222
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| |||||||||| || ||  ||||||||||  ||| |||||||| |||||||||||  ||| || ||||||| | ||||||||||| ||    
T  28034337 cacactcttacctaaaaccttaaagcaataagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgcgggacatataattc 28034238  T
Q  108 acacttgtacacaaca 123  Q
    ||||||| ||||||||    
T  28034237 acacttgcacacaaca 28034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 44621491 - 44621420
Alignment:
Q  51 tcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaac 122  Q
    |||||||||||||||||| |||||||||| |||||||| | || |||||||||||||||||||| |||||||    
T  44621491 tcttacttataaggtgtttaacctttactgttttatcccatgttggacatataactcacacttgcacacaac 44621420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 6975504 - 6975606
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactc 107  Q
    |||||||||||| |||| ||||||   |||| |||||| ||| ||||||||||||| | ||||||||||||| ||||||| || ||| ||||||||||||    
T  6975504 cacactcttacccaaaatcttaagataatggatttatgagtcctcttacttataagatattcaacctttactattttatcggatgtgagacatataactc 6975603  T
Q  108 aca 110  Q
    |||    
T  6975604 aca 6975606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 54108650 - 54108527
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggttt-atgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacata 101  Q
    |||| |||||||||| | ||||||||||||| |||  ||| ||||||| | ||||||||||||||||||||||||||| |||||||| |  ||||||  |    
T  54108650 gacaccacactcttagccaaaaccttaaggcaatgaattttatgggtccttttacttataaggtgttcaacctttactattttatcctatatgggac--a 54108553  T
Q  102 taactcacacttg-tacacaacaaca 126  Q
    |||||||||||||  |||||||||||    
T  54108552 taactcacacttgcaacacaacaaca 54108527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 40067157 - 40067041
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaaccttt-actcttttatccgacgtgggacata 101  Q
    ||||||||||| ||||| |||| |||||||   ||| | |||| ||| |||||||||||| ||||||||| ||| || ||||||||||| || | |||||    
T  40067157 gacatcacacttttacccaaaatcttaaggtagtggatctatgtgtcctcttacttataatgtgttcaactttttacacttttatccgatgtagaacata 40067058  T
Q  102 taactcacacttgtaca 118  Q
    |||||||||||||||||    
T  40067057 taactcacacttgtaca 40067041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 48111741 - 48111833
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgg 95  Q
    |||| ||||||| |||| ||||||||||||  |||| |||||  ||| | |||||||||| ||||||||||||||||||||||||||| ||||    
T  48111741 gacaccacactcatacctaaaaccttaaggtaatggatttataagtccttttacttataatgtgttcaacctttactcttttatccgaggtgg 48111833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 18879915 - 18879852
Alignment:
Q  7 tcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttca 70  Q
    ||||||||||||| ||||||||||||  || ||||||| |||||||||||||||||||||||||    
T  18879915 tcacactcttacccaaaaccttaaggaaataggtttataggtcatcttacttataaggtgttca 18879852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 19504757 - 19504695
Alignment:
Q  64 gtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||||||| |||||| ||||||||||  |||||||||||||||| |||||||||||||||||    
T  19504757 gtgttcaacttttactattttatccgatatgggacatataactcatacttgtacacaacaaca 19504695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 31691260 - 31691203
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggt 65  Q
    |||||||||||| ||||||||||||| ||| ||||||||||| |||||||||||||||    
T  31691260 cacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggt 31691203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 50788087 - 50788137
Alignment:
Q  64 gtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    |||||||||||||||| |||||||||| ||||||||||||||| |||||||    
T  50788087 gtgttcaacctttactattttatccgatgtgggacatataacttacacttg 50788137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 760301 - 760194
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||| ||||||||| | ||||||| ||| ||||||||||| ||| |||||||| ||  |||||||| | | || ||| ||| |||||||||||    
T  760301 gacaccacacttttaccaaaatc-ttaaggcaatgagtttatgggtcctctcacttataaagttctcaaccttcatttttctattcgatgtgggacatat 760203  T
Q  103 aactcacac 111  Q
    |||||||||    
T  760202 aactcacac 760194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 45050649 - 45050593
Alignment:
Q  68 tcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaa 124  Q
    |||||||||||||||||||  || ||| ||||||||||||||||||| |||||||||    
T  45050649 tcaacctttactcttttatttgatgtgagacatataactcacacttgcacacaacaa 45050593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 15841411 - 15841482
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacct 74  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||  || ||| ||||| || |||||||||||    
T  15841411 gacatcacactcttacccaaaaccttaaggcaatgtgtttatgaatcctctcacttacaaagtgttcaacct 15841482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 3271895 - 3271841
Alignment:
Q  8 cacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataa 62  Q
    |||||||||||| ||||||||||||| || |||||||||||  ||||||||||||    
T  3271895 cacactcttacccaaaaccttaaggcaataggtttatgggttctcttacttataa 3271841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 45489792 - 45489870
Alignment:
Q  38 ggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgta 116  Q
    |||||| || |||||||||||||| | | ||||| |||||||||||||||| | |||  |||||||||||||| |||||    
T  45489792 ggtttaaggatcatcttacttatatgatattcaatctttactcttttatccaatgtgatacatataactcacaattgta 45489870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 11348410 - 11348494
Alignment:
Q  42 tatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||| || ||| |||||||| |||||||||||  ||| ||||||| || || | |||||||||||||| ||| |||||||||||    
T  11348410 tatggatcctctcacttataaagtgttcaacctccactattttatctgatgtagaacatataactcacaattgcacacaacaaca 11348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 11706636 - 11706687
Alignment:
Q  75 ttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    ||||| |||||||||| |||||||||| ||||||| |||| |||||||||||    
T  11706636 ttacttttttatccgatgtgggacatacaactcacccttgcacacaacaaca 11706687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 23817724 - 23817783
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataa 62  Q
    |||| |||||||||||| ||||||||||||| ||| |||||||  || ||||||||||||    
T  23817724 gacaccacactcttacccaaaaccttaaggcaatgagtttatgaatcctcttacttataa 23817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 34544215 - 34544148
Alignment:
Q  8 cacactcttacc-aaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacct 74  Q
    |||||||||||| |||||||||||||| ||| ||||||||||| ||| | |||||| ||| |||||||    
T  34544215 cacactcttacccaaaaaccttaaggcaatgagtttatgggtcctctcatttataaagtgatcaacct 34544148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 11197339 - 11197293
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtc 49  Q
    |||| |||||||||||| |||||| |||||| |||||||||||||||    
T  11197339 gacaccacactcttacccaaaaccctaaggcaatgggtttatgggtc 11197293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 15841034 - 15841146
Alignment:
Q  9 acactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactca 108  Q
    ||||||||||| ||||| |||| || |||||||||| | || ||| ||||||||  |||||| |||  ||| || |||| ||  |||||||||||| |||    
T  15841034 acactcttacccaaaac-ttaaagcaatgggtttatagatcctctcacttataaaatgttcagcctccacttttctatctgatatgggacatataattca 15841132  T
Q  109 cacttgtacacaac 122  Q
    || |||||||||||    
T  15841133 catttgtacacaac 15841146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 85; Significance: 2e-40; HSPs: 3)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 1159 - 1275
Alignment:
Q  11 actcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcaca 110  Q
    ||||||||| ||||||||||||| ||||||||||| ||| | || ||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  1159 actcttacccaaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaacctttactcttttatccaatgtgggacatataactcaca 1258  T
Q  111 cttgtacacaacaacat 127  Q
    |||||||||||||||||    
T  1259 cttgtacacaacaacat 1275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 1736 - 1802
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttc 69  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  1736 gacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctctcacttataaggtgttc 1802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 3092 - 3153
Alignment:
Q  65 tgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaaca 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||    
T  3092 tgttcaacctttactcttttatccgatgtgggacatataactcacacctgcacacaacaaca 3153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 5470 - 5349
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||| | |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| |||| ||||||    
T  5470 gacaccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatat 5371  T
Q  103 aactcacacttgtacacaacaa 124  Q
    |||||||||||| |||||||||    
T  5370 aactcacacttgcacacaacaa 5349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 5095 - 4972
Alignment:
Q  3 gacatcacactcttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatat 102  Q
    |||| |||||||||||| |||||| |||||| ||| ||||||||||| | ||||||||||| | || |||||||||| || | ||||| ||| |||||||    
T  5095 gacaccacactcttacccaaaaccataaggcaatgagtttatgggtctttttacttataagatattaaacctttactgttctctccgatgtgagacatat 4996  T
Q  103 aactcacacttgtacacaacaaca 126  Q
    || ||||||||| |||||||||||    
T  4995 aattcacacttgcacacaacaaca 4972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 5867 - 5767
Alignment:
Q  26 cttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaac 125  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||    
T  5867 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaacaac 5768  T
Q  126 a 126  Q
    |    
T  5767 a 5767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 5510 - 5377
Alignment:
Q  3 gacatcacactcttacc-aaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacata 101  Q
    |||| |||||||||||| |||||| ||||| | ||  ||||||||| | ||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  5510 gacaccacactcttacccaaaaactttaagacaatatgtttatgggccctcttacttataaggtgttcaacctttactattttatccgatgtaggacata 5411  T
Q  102 taactcacacttgtacacaacaacataaagcacc 135  Q
    ||||||||||||| |||||||||||  |||||||    
T  5410 taactcacacttgcacacaacaacaataagcacc 5377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 17518 - 17624
Alignment:
Q  20 aaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacac 119  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| || ||| ||||||||||||||||||| ||||    
T  17518 aaaaaccttaaggctatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacac 17617  T
Q  120 aacaaca 126  Q
    |||||||    
T  17618 aacaaca 17624  T

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Target: scaffold0504 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 10192 - 10280
Alignment:
Q  39 gtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttgtacacaacaacat 127  Q
    ||||||||||| |||||||||||||||||||||| |||||  |||||||||| ||| |||||||||||||||||||| |||||||||||    
T  10192 gtttatgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactcacacttgtgcacaacaacat 10280  T

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Target: scaffold0027 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 47461 - 47350
Alignment:
Q  15 ttaccaaaaaccttaaggcgatgggtttatgggtcatcttacttataaggtgttcaacctttactcttttatccgacgtgggacatataactcacacttg 114  Q
    ||||| ||||| ||||||| |||||||||||| |  ||||||||||||||||||||| ||||||| ||||||| || ||| ||||| ||| |||||||||    
T  47461 ttacccaaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaaactttactattttatcggatgtgagacatttaattcacacttg 47362  T
Q  115 tacacaacaaca 126  Q
     ||||| |||||    
T  47361 cacacatcaaca 47350  T

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Target: scaffold0113 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 39870 - 39830
Alignment:
Q  84 tatccgacgtgggacatataactcacacttgtacacaacaa 124  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  39870 tatccgatgtgggacatataactcacacttgaacacaacaa 39830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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