View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11813_low_34 (Length: 315)
Name: NF11813_low_34
Description: NF11813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11813_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 2423402 - 2423141
Alignment:
| Q |
1 |
aggtattaaggagtggaagttgcatattgaagaagttcaaaaagcatgaagatgaaacagatccagttctttactttttctctcaagtggatttgaaact |
100 |
Q |
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| T |
2423402 |
aggtattaaggagtggaagttgcatattgaagaagttcaaaaagcatgaagatgaaacagatccagttctttactttttctctcaagtggatttgaaact |
2423303 |
T |
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| Q |
101 |
tgtttgtagagtgttgaatatgtcaaggataacaactgatcaactagcatggtgtcgtagtaaactaaacaagatcaattttgtaaaccgtaggatacat |
200 |
Q |
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| T |
2423302 |
tgtttgtagagtgttgaatatgtcaaggataacaactgatcaactagcatggtgtcgtagtaaactaaacaagatcaattttgtaaaccgtaggatacat |
2423203 |
T |
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| Q |
201 |
gtagaaccatcattcttactttttcctaat----taatgattagattaattgctagattagt |
258 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
2423202 |
gtagaaccatcattcttactttttcctaattaattaatgattagattaattgctagattagt |
2423141 |
T |
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