View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11813_low_36 (Length: 310)
Name: NF11813_low_36
Description: NF11813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11813_low_36 |
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Alignment Details
Target: chr5 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 20 - 295
Target Start/End: Original strand, 7723839 - 7724114
Alignment:
| Q |
20 |
ggtacgtacaaccacagaaccagaagatgcagtgtttctctccagcaatgactaacgagttccgtttcattgatgaaaccaatcatgattctgaaaatgg |
119 |
Q |
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| T |
7723839 |
ggtacgtacaaccacagaaccagaagatgcagtgtttctctccggcaattactaacgagttccgtttcattgatgaaaccaatcatgattctgaaaatgg |
7723938 |
T |
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| Q |
120 |
cattccatttctctcttggagactctgatagaacaagcctcgttcatgaaaaatattaataataatgttaaaatagtaatagatttagtaaagcagctag |
219 |
Q |
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| T |
7723939 |
cattccatttctctcttggagactctgatagaacaagcctcgttcatgaaaaatattaataataatgttataatagtaatagatttagtaaagcagctag |
7724038 |
T |
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| Q |
220 |
gacggtcaagaccaatgataatgatatgtagaagatgtttttgattgcgatggttctatggtatcgtcacatgatg |
295 |
Q |
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| T |
7724039 |
gacggtcaagaccaatgataatgatatgtagaagatgtttttgattgcgatggttctatggtatcgtcacatgatg |
7724114 |
T |
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