View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11814_high_24 (Length: 273)

Name: NF11814_high_24
Description: NF11814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11814_high_24
NF11814_high_24
[»] chr5 (45 HSPs)
chr5 (1-254)||(14284980-14285233)
chr5 (74-254)||(14292147-14292328)
chr5 (1-73)||(25627057-25627129)
chr5 (1-74)||(34984805-34984878)
chr5 (1-73)||(7918473-7918545)
chr5 (1-73)||(21589288-21589360)
chr5 (2-74)||(30883203-30883275)
chr5 (3-74)||(87429-87500)
chr5 (1-76)||(26078055-26078130)
chr5 (73-191)||(15011664-15011781)
chr5 (1-74)||(30109312-30109385)
chr5 (1-73)||(16773807-16773879)
chr5 (17-73)||(21549157-21549213)
chr5 (1-73)||(29075781-29075853)
chr5 (2-73)||(892479-892550)
chr5 (2-73)||(16457810-16457881)
chr5 (3-73)||(17028270-17028340)
chr5 (1-73)||(5390856-5390926)
chr5 (1-74)||(16436617-16436689)
chr5 (1-74)||(22737081-22737154)
chr5 (1-73)||(6844729-6844801)
chr5 (6-73)||(14495814-14495881)
chr5 (2-73)||(19043458-19043529)
chr5 (7-73)||(8278285-8278351)
chr5 (1-74)||(22020866-22020939)
chr5 (157-254)||(14778108-14778209)
chr5 (23-75)||(26598522-26598574)
chr5 (3-50)||(4793094-4793141)
chr5 (3-74)||(29692392-29692463)
chr5 (1-71)||(18596005-18596075)
chr5 (16-74)||(30735089-30735147)
chr5 (1-62)||(43442207-43442268)
chr5 (6-66)||(1410668-1410728)
chr5 (3-75)||(40461619-40461691)
chr5 (2-74)||(43241687-43241759)
chr5 (207-254)||(15011611-15011658)
chr5 (207-254)||(15055547-15055594)
chr5 (27-73)||(3252319-3252365)
chr5 (1-31)||(35360090-35360120)
chr5 (1-70)||(12877696-12877765)
chr5 (1-70)||(16172988-16173056)
chr5 (1-66)||(41730549-41730614)
chr5 (33-73)||(3915034-3915074)
chr5 (1-73)||(16638815-16638887)
chr5 (1-49)||(25979194-25979242)
[»] chr8 (56 HSPs)
chr8 (1-74)||(16852339-16852412)
chr8 (6-74)||(5264543-5264611)
chr8 (1-73)||(18540298-18540370)
chr8 (1-74)||(19703491-19703564)
chr8 (1-73)||(968362-968434)
chr8 (5-71)||(2203494-2203560)
chr8 (1-71)||(3624582-3624652)
chr8 (1-74)||(12988427-12988500)
chr8 (1-73)||(23874386-23874458)
chr8 (3-75)||(44780120-44780192)
chr8 (1-72)||(29858053-29858124)
chr8 (1-73)||(33017214-33017286)
chr8 (2-73)||(26688865-26688936)
chr8 (1-76)||(28783057-28783132)
chr8 (1-71)||(8794349-8794419)
chr8 (1-73)||(11819776-11819848)
chr8 (1-73)||(29431011-29431083)
chr8 (7-78)||(8484994-8485065)
chr8 (18-73)||(20994479-20994534)
chr8 (1-74)||(3826781-3826854)
chr8 (2-75)||(4830485-4830558)
chr8 (1-74)||(18897165-18897238)
chr8 (1-73)||(11518881-11518953)
chr8 (1-73)||(27750730-27750802)
chr8 (2-73)||(23361654-23361725)
chr8 (2-73)||(30483889-30483960)
chr8 (2-64)||(10287484-10287546)
chr8 (2-55)||(6536538-6536591)
chr8 (1-74)||(11928735-11928808)
chr8 (1-74)||(35641905-35641978)
chr8 (1-62)||(35690068-35690129)
chr8 (1-73)||(6436559-6436631)
chr8 (1-73)||(6530807-6530878)
chr8 (17-73)||(6569791-6569847)
chr8 (3-74)||(11793527-11793598)
chr8 (23-74)||(22268959-22269010)
chr8 (1-74)||(13129667-13129740)
chr8 (1-70)||(18546366-18546435)
chr8 (1-53)||(12281514-12281566)
chr8 (1-73)||(33727877-33727949)
chr8 (17-73)||(35826311-35826367)
chr8 (2-73)||(8059632-8059703)
chr8 (23-74)||(28566104-28566155)
chr8 (23-74)||(28573727-28573778)
chr8 (23-73)||(40591732-40591782)
chr8 (1-74)||(3058053-3058126)
chr8 (1-74)||(5801046-5801119)
chr8 (1-70)||(11492077-11492146)
chr8 (24-73)||(28898516-28898565)
chr8 (16-73)||(32157191-32157248)
chr8 (1-70)||(36042984-36043053)
chr8 (1-53)||(7140729-7140781)
chr8 (23-71)||(7286209-7286257)
chr8 (1-49)||(34628666-34628714)
chr8 (1-37)||(38661915-38661951)
chr8 (1-73)||(43969002-43969074)
[»] chr1 (73 HSPs)
chr1 (1-75)||(36371468-36371542)
chr1 (1-71)||(33700777-33700847)
chr1 (1-74)||(4566547-4566620)
chr1 (2-73)||(9165200-9165271)
chr1 (1-73)||(2219972-2220044)
chr1 (2-74)||(40257398-40257470)
chr1 (1-74)||(21547484-21547557)
chr1 (1-69)||(17745260-17745328)
chr1 (9-73)||(31794276-31794340)
chr1 (7-73)||(50901581-50901648)
chr1 (1-75)||(8177186-8177260)
chr1 (1-74)||(6122793-6122866)
chr1 (1-70)||(15786324-15786393)
chr1 (1-73)||(19528331-19528403)
chr1 (1-73)||(51703779-51703851)
chr1 (2-73)||(52116786-52116857)
chr1 (6-72)||(44126396-44126462)
chr1 (5-66)||(35699959-35700020)
chr1 (1-73)||(2799862-2799934)
chr1 (1-73)||(10526823-10526895)
chr1 (1-73)||(16169982-16170054)
chr1 (6-74)||(41508830-41508898)
chr1 (3-74)||(25297771-25297842)
chr1 (8-75)||(25494080-25494147)
chr1 (1-75)||(6650593-6650667)
chr1 (1-74)||(1247112-1247185)
chr1 (1-74)||(8904413-8904486)
chr1 (1-66)||(17410238-17410303)
chr1 (9-74)||(21268005-21268070)
chr1 (10-63)||(28022138-28022191)
chr1 (1-74)||(51814493-51814566)
chr1 (1-62)||(52336778-52336839)
chr1 (1-73)||(7743329-7743401)
chr1 (1-73)||(16893394-16893466)
chr1 (9-72)||(18459243-18459307)
chr1 (1-53)||(31383802-31383854)
chr1 (7-75)||(45235389-45235457)
chr1 (1-76)||(11063553-11063628)
chr1 (2-73)||(15581147-15581217)
chr1 (3-70)||(24730387-24730454)
chr1 (3-74)||(37046984-37047054)
chr1 (23-74)||(39012290-39012341)
chr1 (3-73)||(952511-952581)
chr1 (7-73)||(1094525-1094591)
chr1 (1-73)||(21694446-21694515)
chr1 (9-70)||(26232398-26232459)
chr1 (1-73)||(1690081-1690153)
chr1 (1-49)||(3265948-3265996)
chr1 (1-73)||(9117119-9117191)
chr1 (1-73)||(12259260-12259332)
chr1 (1-69)||(14787340-14787408)
chr1 (1-69)||(24047106-24047174)
chr1 (3-74)||(4824970-4825041)
chr1 (2-73)||(30689012-30689083)
chr1 (23-66)||(35187926-35187969)
chr1 (22-73)||(38978967-38979018)
chr1 (23-70)||(44486183-44486230)
chr1 (16-70)||(8818142-8818196)
chr1 (3-73)||(19940878-19940948)
chr1 (19-73)||(24857852-24857906)
chr1 (7-44)||(12370192-12370229)
chr1 (7-68)||(36428717-36428778)
chr1 (1-69)||(9224779-9224847)
chr1 (2-74)||(11687629-11687701)
chr1 (1-49)||(12587294-12587342)
chr1 (7-71)||(17296986-17297050)
chr1 (1-73)||(27567126-27567198)
chr1 (23-74)||(29056376-29056428)
chr1 (2-74)||(29817674-29817746)
chr1 (1-73)||(30420310-30420382)
chr1 (9-53)||(35562745-35562789)
chr1 (1-73)||(37400274-37400346)
chr1 (11-55)||(44046162-44046206)
[»] scaffold0002 (1 HSPs)
scaffold0002 (2-70)||(94976-95044)
[»] chr7 (75 HSPs)
chr7 (1-73)||(26459414-26459486)
chr7 (1-74)||(43215183-43215256)
chr7 (1-73)||(17113795-17113867)
chr7 (1-73)||(20335835-20335907)
chr7 (1-73)||(39631844-39631916)
chr7 (7-78)||(25021345-25021416)
chr7 (1-84)||(45709712-45709795)
chr7 (1-75)||(23552116-23552190)
chr7 (4-73)||(42836008-42836077)
chr7 (1-73)||(22760863-22760935)
chr7 (1-73)||(24513797-24513869)
chr7 (1-73)||(30442488-30442560)
chr7 (1-73)||(48771938-48772010)
chr7 (23-73)||(45559200-45559250)
chr7 (1-74)||(17041016-17041089)
chr7 (1-74)||(30579334-30579407)
chr7 (1-73)||(7801180-7801252)
chr7 (1-73)||(43590907-43590979)
chr7 (2-73)||(19553454-19553524)
chr7 (1-74)||(41487361-41487431)
chr7 (1-75)||(2446306-2446380)
chr7 (3-73)||(5579240-5579310)
chr7 (3-73)||(18363696-18363766)
chr7 (7-73)||(23301612-23301678)
chr7 (1-74)||(14058252-14058325)
chr7 (1-74)||(14368280-14368353)
chr7 (1-70)||(15905678-15905746)
chr7 (1-74)||(42711957-42712030)
chr7 (17-70)||(45976943-45976996)
chr7 (1-73)||(2962460-2962531)
chr7 (1-77)||(23945857-23945933)
chr7 (1-73)||(25590611-25590683)
chr7 (1-73)||(31835192-31835264)
chr7 (1-73)||(33869449-33869521)
chr7 (25-73)||(39499747-39499795)
chr7 (1-68)||(7499928-7499995)
chr7 (2-73)||(25956298-25956368)
chr7 (2-73)||(27776172-27776243)
chr7 (19-74)||(35328896-35328951)
chr7 (1-76)||(38374603-38374678)
chr7 (1-68)||(41519268-41519335)
chr7 (3-73)||(5273596-5273666)
chr7 (8-72)||(22927477-22927541)
chr7 (1-73)||(26199509-26199581)
chr7 (1-72)||(35513467-35513538)
chr7 (7-73)||(3280495-3280561)
chr7 (3-73)||(15137553-15137623)
chr7 (5-71)||(21854550-21854616)
chr7 (1-67)||(21877814-21877880)
chr7 (17-74)||(11720980-11721037)
chr7 (1-74)||(33181214-33181287)
chr7 (1-66)||(37085553-37085618)
chr7 (1-70)||(43663099-43663168)
chr7 (3-71)||(7744118-7744186)
chr7 (8-52)||(28236592-28236636)
chr7 (3-71)||(29385749-29385817)
chr7 (3-70)||(4566434-4566501)
chr7 (5-52)||(5668579-5668626)
chr7 (2-49)||(26703149-26703196)
chr7 (1-56)||(33222387-33222442)
chr7 (18-73)||(48125195-48125250)
chr7 (1-75)||(7721367-7721441)
chr7 (4-73)||(18011356-18011426)
chr7 (16-70)||(20952168-20952222)
chr7 (27-73)||(22932741-22932787)
chr7 (7-73)||(23735237-23735303)
chr7 (16-66)||(36803646-36803696)
chr7 (23-69)||(44146577-44146623)
chr7 (16-73)||(5830622-5830679)
chr7 (1-74)||(18056779-18056852)
chr7 (1-74)||(25655232-25655305)
chr7 (1-74)||(35119382-35119455)
chr7 (5-73)||(37233580-37233648)
chr7 (7-71)||(44628193-44628257)
chr7 (3-62)||(48079653-48079713)
[»] chr4 (66 HSPs)
chr4 (1-73)||(37109355-37109427)
chr4 (1-70)||(7292802-7292871)
chr4 (1-73)||(19238581-19238653)
chr4 (1-73)||(55427204-55427276)
chr4 (1-75)||(7949458-7949532)
chr4 (1-74)||(2185036-2185110)
chr4 (1-73)||(37274463-37274536)
chr4 (1-74)||(37720218-37720291)
chr4 (1-73)||(9241029-9241101)
chr4 (1-73)||(31759662-31759734)
chr4 (1-73)||(39509070-39509142)
chr4 (1-73)||(46545711-46545783)
chr4 (1-73)||(2622399-2622475)
chr4 (24-74)||(27965537-27965587)
chr4 (1-75)||(51250526-51250600)
chr4 (1-74)||(12798683-12798756)
chr4 (2-55)||(16581711-16581764)
chr4 (1-74)||(19680792-19680865)
chr4 (1-74)||(24827824-24827897)
chr4 (1-58)||(38869783-38869840)
chr4 (1-66)||(49576898-49576963)
chr4 (1-73)||(8030208-8030280)
chr4 (1-73)||(17618281-17618353)
chr4 (1-73)||(47044717-47044789)
chr4 (6-73)||(1730498-1730565)
chr4 (2-69)||(13901746-13901813)
chr4 (23-70)||(41683752-41683799)
chr4 (1-55)||(23377974-23378028)
chr4 (16-70)||(33438497-33438551)
chr4 (1-73)||(9936965-9937037)
chr4 (1-73)||(28635696-28635768)
chr4 (1-73)||(31826609-31826681)
chr4 (3-71)||(40283992-40284060)
chr4 (1-56)||(13015444-13015499)
chr4 (23-74)||(29195094-29195145)
chr4 (1-56)||(30938223-30938278)
chr4 (26-73)||(37443702-37443749)
chr4 (2-73)||(51948480-51948551)
chr4 (3-73)||(4249177-4249247)
chr4 (3-73)||(5795415-5795485)
chr4 (41-78)||(21434806-21434843)
chr4 (1-74)||(21660148-21660221)
chr4 (1-74)||(21668912-21668985)
chr4 (1-70)||(41346967-41347036)
chr4 (1-73)||(19229212-19229283)
chr4 (1-69)||(37980152-37980219)
chr4 (1-73)||(46295097-46295169)
chr4 (7-47)||(47202433-47202473)
chr4 (1-73)||(56409951-56410022)
chr4 (17-68)||(13265128-13265179)
chr4 (26-73)||(15180741-15180788)
chr4 (3-73)||(25434665-25434733)
chr4 (3-73)||(38206132-38206201)
chr4 (3-73)||(42281240-42281309)
chr4 (8-73)||(13496241-13496306)
chr4 (17-66)||(29312272-29312321)
chr4 (1-73)||(55256203-55256275)
chr4 (6-74)||(4923549-4923617)
chr4 (1-49)||(5450117-5450165)
chr4 (1-73)||(8325383-8325455)
chr4 (2-74)||(21344816-21344887)
chr4 (1-69)||(24234649-24234717)
chr4 (1-73)||(33619206-33619278)
chr4 (9-73)||(40285623-40285687)
chr4 (2-66)||(44194989-44195053)
chr4 (1-45)||(46329192-46329236)
[»] chr2 (58 HSPs)
chr2 (1-73)||(42327399-42327471)
chr2 (3-73)||(11062360-11062430)
chr2 (1-74)||(29503270-29503343)
chr2 (1-73)||(42922414-42922487)
chr2 (1-75)||(39714990-39715064)
chr2 (1-74)||(4060218-4060291)
chr2 (1-74)||(37480074-37480147)
chr2 (1-73)||(23052527-23052599)
chr2 (1-73)||(40416394-40416466)
chr2 (3-74)||(42602553-42602624)
chr2 (1-74)||(21195680-21195753)
chr2 (9-74)||(1729815-1729880)
chr2 (1-74)||(7799039-7799112)
chr2 (3-76)||(11251084-11251157)
chr2 (3-72)||(16918584-16918653)
chr2 (1-73)||(28846691-28846763)
chr2 (3-74)||(34041594-34041665)
chr2 (1-72)||(37755975-37756046)
chr2 (1-74)||(21213768-21213841)
chr2 (1-73)||(19244109-19244181)
chr2 (6-73)||(1435064-1435131)
chr2 (3-74)||(19322767-19322838)
chr2 (1-71)||(12086133-12086203)
chr2 (7-73)||(19016031-19016097)
chr2 (1-74)||(3001378-3001451)
chr2 (1-74)||(14500276-14500349)
chr2 (1-74)||(25931005-25931078)
chr2 (1-74)||(29197380-29197453)
chr2 (1-73)||(12994380-12994452)
chr2 (1-73)||(42860348-42860420)
chr2 (7-70)||(30359657-30359720)
chr2 (11-73)||(16381668-16381730)
chr2 (1-74)||(33569862-33569936)
chr2 (8-70)||(33962795-33962857)
chr2 (1-62)||(6658393-6658454)
chr2 (1-49)||(4262306-4262354)
chr2 (1-73)||(4438983-4439055)
chr2 (1-73)||(13803495-13803567)
chr2 (1-73)||(41908642-41908714)
chr2 (2-74)||(45672383-45672455)
chr2 (1-75)||(13519056-13519131)
chr2 (7-69)||(24191842-24191904)
chr2 (7-73)||(26545840-26545906)
chr2 (16-66)||(29964822-29964872)
chr2 (1-55)||(30410553-30410607)
chr2 (23-73)||(32106566-32106616)
chr2 (1-74)||(3697404-3697476)
chr2 (8-73)||(5147690-5147755)
chr2 (44-73)||(9318121-9318150)
chr2 (14-67)||(12982513-12982566)
chr2 (1-74)||(30808651-30808724)
chr2 (1-70)||(32687484-32687553)
chr2 (1-74)||(38854466-38854539)
chr2 (1-69)||(12801293-12801361)
chr2 (1-73)||(16525178-16525249)
chr2 (1-73)||(29996464-29996536)
chr2 (23-75)||(43964014-43964066)
chr2 (2-74)||(45672234-45672306)
[»] chr3 (74 HSPs)
chr3 (3-74)||(27093367-27093438)
chr3 (1-73)||(16354896-16354968)
chr3 (1-74)||(8051213-8051286)
chr3 (1-73)||(10445143-10445216)
chr3 (2-75)||(53412943-53413016)
chr3 (1-73)||(37788469-37788541)
chr3 (1-74)||(30311305-30311378)
chr3 (3-76)||(46518625-46518698)
chr3 (1-73)||(8170672-8170744)
chr3 (1-73)||(14186648-14186719)
chr3 (3-74)||(31520611-31520682)
chr3 (11-73)||(31788984-31789046)
chr3 (1-66)||(2667869-2667934)
chr3 (1-74)||(10499113-10499186)
chr3 (1-74)||(36720380-36720453)
chr3 (1-73)||(4222141-4222213)
chr3 (1-77)||(15048065-15048141)
chr3 (2-73)||(3054994-3055065)
chr3 (3-74)||(8368805-8368876)
chr3 (1-72)||(47454621-47454692)
chr3 (1-62)||(32651442-32651503)
chr3 (1-73)||(21960551-21960623)
chr3 (1-73)||(51903882-51903954)
chr3 (3-74)||(7975417-7975488)
chr3 (1-75)||(19154629-19154703)
chr3 (1-71)||(42799752-42799821)
chr3 (3-69)||(49494152-49494218)
chr3 (5-66)||(4844519-4844580)
chr3 (5-66)||(4870215-4870276)
chr3 (1-66)||(8075131-8075196)
chr3 (1-70)||(30510203-30510272)
chr3 (1-74)||(32638944-32639017)
chr3 (17-73)||(203090-203146)
chr3 (1-73)||(2597224-2597296)
chr3 (1-73)||(14339610-14339682)
chr3 (38-74)||(26988995-26989031)
chr3 (1-73)||(27923047-27923119)
chr3 (1-73)||(28703408-28703480)
chr3 (1-73)||(35111180-35111252)
chr3 (27-74)||(9832496-9832543)
chr3 (2-74)||(34062553-34062627)
chr3 (23-73)||(11092195-11092245)
chr3 (3-49)||(27259185-27259231)
chr3 (16-70)||(28928898-28928952)
chr3 (1-74)||(9557319-9557392)
chr3 (2-71)||(10682949-10683017)
chr3 (1-46)||(44743859-44743904)
chr3 (1-74)||(45308906-45308979)
chr3 (2-74)||(5499412-5499484)
chr3 (1-65)||(11612307-11612371)
chr3 (1-65)||(12761520-12761584)
chr3 (2-66)||(17554778-17554842)
chr3 (6-74)||(24481580-24481648)
chr3 (1-53)||(29563920-29563972)
chr3 (26-73)||(16991542-16991589)
chr3 (3-74)||(26871510-26871581)
chr3 (39-73)||(24459990-24460024)
chr3 (3-73)||(47810750-47810820)
chr3 (41-70)||(10969938-10969967)
chr3 (16-73)||(26481927-26481984)
chr3 (1-74)||(34844370-34844442)
chr3 (1-74)||(40268488-40268560)
chr3 (1-50)||(43902366-43902415)
chr3 (1-34)||(49397545-49397578)
chr3 (1-74)||(54990702-54990774)
chr3 (45-73)||(8796140-8796168)
chr3 (1-73)||(10828737-10828809)
chr3 (2-70)||(13808890-13808958)
chr3 (10-74)||(18319181-18319245)
chr3 (2-74)||(30232329-30232401)
chr3 (1-61)||(37504380-37504440)
chr3 (1-73)||(40063619-40063691)
chr3 (1-61)||(47236975-47237035)
chr3 (1-73)||(53956384-53956456)
[»] chr6 (40 HSPs)
chr6 (1-74)||(33549103-33549176)
chr6 (1-74)||(12188307-12188380)
chr6 (3-74)||(31622997-31623068)
chr6 (1-74)||(10338178-10338251)
chr6 (1-74)||(12234511-12234584)
chr6 (1-73)||(30127400-30127472)
chr6 (1-73)||(14557962-14558034)
chr6 (1-73)||(21418470-21418542)
chr6 (7-69)||(6776617-6776679)
chr6 (3-73)||(13661521-13661590)
chr6 (3-73)||(19638010-19638080)
chr6 (1-74)||(13330086-13330159)
chr6 (1-73)||(11423566-11423638)
chr6 (1-49)||(16405109-16405157)
chr6 (1-73)||(24641194-24641266)
chr6 (23-74)||(22697-22748)
chr6 (6-73)||(3779339-3779406)
chr6 (16-70)||(34293835-34293889)
chr6 (1-67)||(34444809-34444875)
chr6 (7-72)||(6758432-6758497)
chr6 (9-66)||(24507548-24507605)
chr6 (1-74)||(27989661-27989734)
chr6 (1-53)||(346551-346602)
chr6 (1-73)||(3715452-3715524)
chr6 (1-73)||(13227162-13227234)
chr6 (23-75)||(13441048-13441100)
chr6 (1-57)||(20213057-20213113)
chr6 (1-57)||(22107080-22107136)
chr6 (1-64)||(12216753-12216816)
chr6 (23-74)||(15497063-15497114)
chr6 (23-73)||(1056711-1056761)
chr6 (3-73)||(14278117-14278186)
chr6 (1-43)||(23910115-23910157)
chr6 (7-69)||(31847095-31847157)
chr6 (1-71)||(32613144-32613214)
chr6 (1-74)||(14199951-14200024)
chr6 (1-62)||(28363948-28364009)
chr6 (1-73)||(2616476-2616548)
chr6 (1-53)||(6385882-6385934)
chr6 (1-49)||(32439829-32439877)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-73)||(15327-15399)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-62)||(19966-20027)
[»] scaffold0118 (1 HSPs)
scaffold0118 (2-73)||(41638-41709)
[»] scaffold0299 (1 HSPs)
scaffold0299 (1-67)||(11534-11600)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-66)||(6923-6988)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-73)||(42524-42596)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-73)||(112282-112354)
[»] scaffold0013 (1 HSPs)
scaffold0013 (2-74)||(91124-91196)
[»] scaffold1367 (1 HSPs)
scaffold1367 (1-67)||(844-910)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-73)||(24053-24125)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-69)||(13050-13118)
[»] scaffold0417 (1 HSPs)
scaffold0417 (9-74)||(10218-10283)
[»] scaffold0337 (1 HSPs)
scaffold0337 (9-66)||(1760-1817)
[»] scaffold0065 (1 HSPs)
scaffold0065 (9-66)||(12196-12253)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-73)||(2474-2546)
[»] scaffold0063 (1 HSPs)
scaffold0063 (9-73)||(35401-35465)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-56)||(25351-25406)
[»] scaffold0238 (1 HSPs)
scaffold0238 (17-74)||(5192-5249)
[»] scaffold0172 (1 HSPs)
scaffold0172 (42-75)||(32814-32847)
[»] scaffold0056 (1 HSPs)
scaffold0056 (28-73)||(61679-61724)
[»] scaffold0517 (1 HSPs)
scaffold0517 (1-73)||(7730-7802)
[»] scaffold0021 (1 HSPs)
scaffold0021 (10-66)||(157000-157056)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-73)||(19851-19923)
[»] scaffold0006 (1 HSPs)
scaffold0006 (3-55)||(18317-18369)


Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 14285233 - 14284980
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttctagcttgaaacttgaaaccagaaaa 100  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14285233 cgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggtttctagcttgaaacttgaaaccagaaaa 14285134  T
Q  101 gtctcaatccagcactagtttcaggaacccaacaaagaagaatagaaaatatggagcaatggtttctaccaagttaaagaatataattacaagctcatat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14285133 gtctcaatccagcactagtttcaggaacccaacaaagaagaatagaaaatatggagcaatggtttctactaagttaaagaatataattacaagctcatat 14285034  T
Q  201 aataacaaaaggcaaaagagataaaccctgcaaaccatgcacaaagtagagaat 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14285033 aataacaaaaggcaaaagagataaaccctgcaaaccatgcacaaagtagagaat 14284980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 74 - 254
Target Start/End: Complemental strand, 14292328 - 14292147
Alignment:
Q  74 tctagcttgaaacttgaaaccagaaaagtctca--atccagcactagtttcaggaacccaacaaagaagaatagaaaatatggagcaatggtttctacca 171  Q
    |||||||||||| ||||||||||||||||||||  ||||| ||| ||||||||| ||||||||||||||||| |||| |||||||||||||||||||| |    
T  14292328 tctagcttgaaatttgaaaccagaaaagtctcacaatccaacaccagtttcaggcacccaacaaagaagaat-gaaagtatggagcaatggtttctacta 14292230  T
Q  172 agttaaagaatataattacaagctcatataataacaaaaggcaaaagagataaaccctgcaaaccatgcacaaagtagagaat 254  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| |||||| |||| |||||    
T  14292229 agtcaaagaatataattagaagctcatataataacaaaaggcaaaagagataaacccagaaaaccctgcacatagtatagaat 14292147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25627129 - 25627057
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25627129 cgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34984878 - 34984805
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||| |||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34984878 cgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggttt 34984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7918473 - 7918545
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| |||||| |||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  7918473 cgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21589360 - 21589288
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| |||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  21589360 cgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 30883203 - 30883275
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| |||||||| |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  30883203 gaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggttt 30883275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 87429 - 87500
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  87429 aacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggttt 87500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26078055 - 26078130
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttct 76  Q
    |||||||||||||| || |||||||| ||||||| || |||| |||||||||||||||||||||||||||||||||    
T  26078055 cgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtttct 26078130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 15011781 - 15011664
Alignment:
Q  73 ttctagcttgaaacttgaaaccagaaaag---tctcaatccagcactagtttcaggaacccaacaaagaagaatagaaaatatggagcaatggtttctac 169  Q
    ||||||||||||| ||||||||||||||    || ||||||||||||||||||||| |||||||||| || ||    |||||| ||||||||||||||||    
T  15011781 ttctagcttgaaatttgaaaccagaaaaagcatcacaatccagcactagtttcaggtacccaacaaataataa----aaatatagagcaatggtttctac 15011686  T
Q  170 caagttaaagaatataattaca 191  Q
    | |||  |||||||||||||||    
T  15011685 cgagtgcaagaatataattaca 15011664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30109312 - 30109385
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||| ||||| |||||||||||||||  |||||||||||||| | ||||||||||||||||||    
T  30109312 cgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggttt 30109385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16773879 - 16773807
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| || ||||| ||||||||||    
T  16773879 cgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 21549157 - 21549213
Alignment:
Q  17 aggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21549157 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29075853 - 29075781
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||| ||||||||| ||||||||||||| | |||||||||||||||||||| ||||||||||||||    
T  29075853 cgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 892479 - 892550
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||| |||||| || ||||||  |||| |||||||||||||||||||||||||||| ||||||    
T  892479 gaacctgagaccttgaggaggagtacactctgaggtcccaagccaataccactaggccaacccaaatgggtt 892550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 16457881 - 16457810
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| |||||||| |||||| |||||||||| |||| ||||||||||||||| ||||||||| |||||||||    
T  16457881 gaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 17028270 - 17028340
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| |||||| |||||||||||| || |||| ||||||| |||||| |||||||||||||||    
T  17028270 aacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactaggtcaacccaagtgggtt 17028340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5390856 - 5390926
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||| |||||  ||||| |  |||||||||||||||||||||||||||| ||||||    
T  5390856 cgaacctgagacctcgaggaggagcac--tcccaagccccaagccaataccactaggccaacccaaatgggtt 5390926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16436689 - 16436617
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||||||| |||||| |||||||||| || | ||||||||||||||||||||||||||||||| ||||    
T  16436689 cgaacatgagaccttgaggaggagcacactccaag-tcccaagccaataccactaggccaacccaagtgagttt 16436617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22737154 - 22737081
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||| | | |||| |||||||| ||| || |||||||||||||||||| |||||||||||||||||    
T  22737154 cgaacctgagacattggggaggagcacacttccaagtcccaagccaataccactagaccaacccaagtgggttt 22737081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6844801 - 6844729
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| ||||||||||||| | ||||||||||  ||||||| |||||||||  ||||||||||||||||||    
T  6844801 cgaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacctggccaacccaagtgggtt 6844729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 14495814 - 14495881
Alignment:
Q  6 ctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||||| ||||||||||||| | ||||| ||||||||| || ||||||||| ||||||    
T  14495814 ctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 19043529 - 19043458
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||| | ||| || | |||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  19043529 gaacctgagactttgagaaggaacacactcccaagttccaagtcaatagcactaggccaacccaagtgggtt 19043458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 8278285 - 8278351
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||| |||||||||||| || ||||||||||||||  || ||||||||||||||||    
T  8278285 tgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22020866 - 22020939
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| ||||||| || ||||| ||||||||||||| | |||||| |||||||||| ||||||||||| ||||||    
T  22020866 cgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccactatgccaacccaagagggttt 22020939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 14778108 - 14778209
Alignment:
Q  157 caatggtttctaccaagttaaagaatataattacaagctcatataat----aacaaaaggcaaaagagataaaccctgcaaaccatgcacaaagtagaga 252  Q
    ||||||||||||| ||||  ||||||||||||||||  ||||||||     ||||||||  ||| |||||||||||| ||||||||||||| || |||||    
T  14778108 caatggtttctactaagtgcaagaatataattacaacttcatataactaacaacaaaagtaaaacgagataaaccctacaaaccatgcacatagaagaga 14778207  T
Q  253 at 254  Q
    ||    
T  14778208 at 14778209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 26598574 - 26598522
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||    
T  26598574 agcacactctcagatcccaagccaataccactaggccaatccaagtgggtttc 26598522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 4793094 - 4793141
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaatac 50  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  4793094 aacctgagacctcgaggaggagcacactcccaggtcccaaaccaatac 4793141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 29692392 - 29692463
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||| | |||||| ||||||||||||| | |||| |||||||||| || ||||||||| |||||||    
T  29692392 aacctgagactttgaggaggagcacactcccagatcccaatccaataccaccagaccaacccaaatgggttt 29692463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18596005 - 18596075
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    ||||||| |||||| |||||| |||||| ||||||||  |||||||||||||||||  ||| |||||||||    
T  18596005 cgaacctaagaccttgaggaggagcacattcccaggtcacaagccaataccactagatcaatccaagtggg 18596075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 30735089 - 30735147
Alignment:
Q  16 gaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||| ||||||||| |||||| |||| |||||| |||||| ||||||||||||||||    
T  30735089 gaggaggagcacactctcaggttacaagtcaatacgactaggtcaacccaagtgggttt 30735147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43442268 - 43442207
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaac 62  Q
    |||||||||||||| |||||| ||||||||||||| |  ||| |||||||||||| ||||||    
T  43442268 cgaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccactatgccaac 43442207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 1410668 - 1410728
Alignment:
Q  6 ctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    |||||||||||||||| ||||||||||||  | ||||| ||||||||| || |||||||||    
T  1410668 ctgagacctcgaggaggagcacactcccatatcccaagtcaataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 40461619 - 40461691
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    |||||||||||| |||||||||||||||| || ||  ||||  |||||||| ||  |||||||||||||||||    
T  40461619 aacctgagaccttgaggagaagcacactctcaagtctcaagttaataccaccagatcaacccaagtgggtttc 40461691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 43241687 - 43241759
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| ||||   ||||||||| || | ||||| |||||||||||| |||||||||||| ||||    
T  43241687 gaacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaacccaagtgagttt 43241759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 15011658 - 15011611
Alignment:
Q  207 aaaaggcaaaagagataaaccctgcaaaccatgcacaaagtagagaat 254  Q
    |||||||||||||||| ||| |||||||||||||||| || |||||||    
T  15011658 aaaaggcaaaagagatcaactctgcaaaccatgcacatagaagagaat 15011611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 15055547 - 15055594
Alignment:
Q  207 aaaaggcaaaagagataaaccctgcaaaccatgcacaaagtagagaat 254  Q
    |||||||| ||||||||||||||| |||||||||||| || |||||||    
T  15055547 aaaaggcataagagataaaccctgtaaaccatgcacatagaagagaat 15055594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 3252319 - 3252365
Alignment:
Q  27 cactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||| ||  |||| |||||||||||||||||||||||||||||    
T  3252319 cactcccaagtctcaagtcaataccactaggccaacccaagtgggtt 3252365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 35360090 - 35360120
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactc 31  Q
    |||||||||||||||||||||||||||||||    
T  35360090 cgaacctgagacctcgaggagaagcacactc 35360120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12877765 - 12877696
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||||||||| | |||||||| ||||||||||  | |||| ||||| ||||||| ||||| |||||||    
T  12877765 cgaacctgagacattgaggagaaacacactcccaaatcccaaaccaatgccactagaccaactcaagtgg 12877696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16172988 - 16173056
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||||||||||| ||| || |||||||||| ||||  |||||||| || || ||||||||||||||||    
T  16172988 cgaacctgagaccttgag-aggagcacactccaaggtctcaagccaacactaccaggccaacccaagtgg 16173056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41730614 - 41730549
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    ||||| ||| |||| |||| | |||||||||| | |||||||  ||||||||||||||||||||||    
T  41730614 cgaacatgataccttgaggtggagcacactccaatgttccaactcaataccactaggccaacccaa 41730549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 3915034 - 3915074
Alignment:
Q  33 caggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| |||||||| |||||||||||||| ||||    
T  3915034 caggttccaagctaataccaccaggccaacccaagtaggtt 3915074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16638887 - 16638815
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||| || || ||||||  ||||| |||||| |||||||||| || |||| |||||||||||||||    
T  16638887 cgaacatgagatcttgaagagaagtgcactctcaggtttcaagccaatatcattaggacaacccaagtgggtt 16638815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25979242 - 25979194
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaata 49  Q
    |||||||||||||| |||||| || |||||||||  |||||||||||||    
T  25979242 cgaacctgagaccttgaggaggagaacactcccaaattccaagccaata 25979194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16852412 - 16852339
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16852412 cgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 16852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 5264611 - 5264543
Alignment:
Q  6 ctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5264611 ctgagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggttt 5264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18540370 - 18540298
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  18540370 cgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19703491 - 19703564
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  19703491 cgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttt 19703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 968434 - 968362
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  968434 cgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 2203560 - 2203494
Alignment:
Q  5 cctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2203560 cctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3624652 - 3624582
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    |||||||||||||| || ||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3624652 cgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12988500 - 12988427
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  12988500 cgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactaggccaatccaagtgggttt 12988427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23874386 - 23874458
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||||||||||  ||| | |||||||| |||||||||||||||||||||||||||||||||||    
T  23874386 cgaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 44780120 - 44780192
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    |||||||||||| |||||| |||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  44780120 aacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggtttc 44780192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 29858053 - 29858124
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggt 72  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||| ||||||||||    
T  29858053 cgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33017286 - 33017214
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||  || |||||||||||||||||||    
T  33017286 cgaacctgagaccttgaggaggagcacacttccaggttccaagccaatatgacaaggccaacccaagtgggtt 33017214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 26688936 - 26688865
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||| |||||| |||||||||| |||| ||||||||| ||||| |||||||||||||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 28783132 - 28783057
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttct 76  Q
    ||||| |||||||| |||||| |||||||||||||||  |||||||||||||| | ||||||||||||||||||||    
T  28783132 cgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggtttct 28783057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8794349 - 8794419
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    |||||||||||||  |||||| |||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  8794349 cgaacctgagaccctgaggaggagcacacttccaggttccaagccaataccactatgccaatccaagtggg 8794419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11819848 - 11819776
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| |||||||||||| || ||||||| ||||||||||| |||||||| ||||||    
T  11819848 cgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggtt 11819776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29431083 - 29431011
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||| |||| ||||| |||||||||||| || ||||||||||||| | |||||||||||||||||||    
T  29431083 cgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 8485065 - 8484994
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttctag 78  Q
    ||||||||| | ||| ||||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||    
T  8485065 tgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaacccaagtgggtttctag 8484994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 20994479 - 20994534
Alignment:
Q  18 ggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3826781 - 3826854
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||| |||| |||| ||||||||| ||  |  |||||||||||||||||||||||||||||||||||    
T  3826781 cgaacctgagatctcgtggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggttt 3826854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 4830558 - 4830485
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    |||||||||||||||||||| | ||||||| ||| | |||| | |||||||| |||||||||||||||||||||    
T  4830558 gaacctgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggtttc 4830485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18897238 - 18897165
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||||||| |||||| |||||||||  |||| |||| |||| ||||||||||||||||||||||||||    
T  18897238 cgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggttt 18897165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11518881 - 11518953
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| |||||| ||||||  | ||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  11518881 cgaacctaagaccttgaggaggggtacactcccaagttccaagcctataccactaggctaacccaagtgggtt 11518953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27750802 - 27750730
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| |||||||||||| || ||||||| ||||||| ||| |||||||| ||||||    
T  27750802 cgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgagggcaacccaaatgggtt 27750730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 23361654 - 23361725
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||| |||||| ||||||||||||  | ||||| ||||||||| ||| |||||||||||||||    
T  23361654 gaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 30483889 - 30483960
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||   |||||| ||||||||||||  | |||||||||||||||| ||||||||||||||||||    
T  30483889 gaacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 10287546 - 10287484
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaaccc 64  Q
    ||||||||||||||||||||||||||||| |||| || ||||||||||| || || |||||||    
T  10287546 gaacctgagacctcgaggagaagcacacttccagatttcaagccaatactaccagaccaaccc 10287484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 6536591 - 6536538
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccacta 55  Q
    ||||||||||||| |||||| |||||||||| |||| |||||||||||||||||    
T  6536591 gaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccacta 6536538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11928735 - 11928808
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||||||||| |||||||| |||||||  || | ||||||| |||||||| |||| |||||||    
T  11928735 cgaacctgagacctcgaggaggagcacacttccaggttataaactaataccattaggccaatccaaatgggttt 11928808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35641905 - 35641978
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||| |||||||| ||||||||||||  |  |||||| ||||||| || |||||||||||||||||    
T  35641905 cgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggttt 35641978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35690068 - 35690129
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaac 62  Q
    |||||||||||||| |||||| |||| || ||||| | ||||||||||||||||||||||||    
T  35690068 cgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggccaac 35690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6436559 - 6436631
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| ||||||||| | |||| |||||||||| | || ||||||||||||||| ||| |||||||||||||||    
T  6436559 cgaatctgagaccttgcggaggagcacactcctaagtcccaagccaataccaccagggcaacccaagtgggtt 6436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6530878 - 6530807
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| | ||| || |||||||||| |||| ||||||||| ||||| |||||||||||||||||||    
T  6530878 cgaacctgagacattgag-aggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgggtt 6530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 6569791 - 6569847
Alignment:
Q  17 aggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||||||| | ||||||||||| ||||||||||||| |||||||||    
T  6569791 aggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 11793527 - 11793598
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||||| |||||| |||||||||| |||| |||||| || ||||| || |||||||||||||||||    
T  11793527 aacctaagaccttgaggaggagcacactccaaggtcccaagcgaacaccacaagaccaacccaagtgggttt 11793598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 22268959 - 22269010
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||| |||| ||||||||| ||||| ||||||||||||||||||||    
T  22268959 agcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggttt 22269010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13129740 - 13129667
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||| |||| |||||| ||| |||||||| || |||| ||||| ||||| ||| |||||||||||||||    
T  13129740 cgaacctgaaaccttgaggaggagcgcactcccaagtcccaaaccaatgccactgggctaacccaagtgggttt 13129667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18546366 - 18546435
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    ||||||||||||||||||||| ||||  ||| ||||| ||||  |||||||||||| |||||| ||||||    
T  18546366 cgaacctgagacctcgaggaggagcatgctctcaggtcccaaatcaataccactagaccaacctaagtgg 18546435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12281566 - 12281514
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccac 53  Q
    |||| ||||||||||||||||  |||||||| ||||| |||||||||||||||    
T  12281566 cgaatctgagacctcgaggaggggcacactctcaggtcccaagccaataccac 12281514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33727877 - 33727949
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| |||||||| ||| ||  ||| || ||||||||||| |||||||| ||||||    
T  33727877 cgaacctgagaccttgaggaggagcacacttccaagtctcaaacctataccactagggcaacccaaatgggtt 33727949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 35826367 - 35826311
Alignment:
Q  17 aggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||| |||||  ||||||| ||||||||||||||||||| ||||||    
T  35826367 aggaggagcacactcacaggtctcaagccactaccactaggccaacccaattgggtt 35826311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 8059703 - 8059632
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||| |||||| | ||||||| ||  | ||||| ||||||||  |||||||||||||||||||    
T  8059703 gaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 28566155 - 28566104
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||  |||| |||| |||||||||||||| ||||||||||||||||    
T  28566155 agcacactctaaggtcccaaaccaataccactaggtcaacccaagtgggttt 28566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 28573778 - 28573727
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||  |||| |||| |||||||||||||| ||||||||||||||||    
T  28573778 agcacactctaaggtcccaaaccaataccactaggtcaacccaagtgggttt 28573727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 40591782 - 40591732
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| || | ||||||||||||| |||||||| ||||||||||    
T  40591782 agcacactcccaagtccgaagccaataccaccaggccaacacaagtgggtt 40591732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3058053 - 3058126
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |  ||| |||||||||||| |  |||| |||||||||| || ||||||||| |||||||    
T  3058053 cgaacctgagaccttgcagaggagcacactcccaagacccaaaccaataccaccagaccaacccaaatgggttt 3058126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5801119 - 5801046
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||||| |||||  | |||||||||| || | |||||| |||||||| ||| ||||||||||||||||    
T  5801119 cgaacttgagacgtcgagacggagcacactcctagatcccaagctaataccaccaggtcaacccaagtgggttt 5801046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11492077 - 11492146
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    ||||||| |||||||||| || ||||||||||||| |  ||||||||||||   | ||||||||||||||    
T  11492077 cgaacctaagacctcgagaaggagcacactcccagatctcaagccaataccgacatgccaacccaagtgg 11492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 28898516 - 28898565
Alignment:
Q  24 gcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||| ||| ||||||||||||| ||||||| ||||| |||||||||    
T  28898516 gcacactctcagattccaagccaatatcactaggtcaacctaagtgggtt 28898565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 32157248 - 32157191
Alignment:
Q  16 gaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||| |||| ||||| |||| ||||| ||||||||| |||||||||||| ||||||    
T  32157248 gaggaggagcatactccaaggtcccaagtcaataccaccaggccaacccaaatgggtt 32157191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36043053 - 36042984
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    ||||||||||| ||   |||| | |||||||||| | |||||||||||||||| || |||||||||||||    
T  36043053 cgaacctgagatcttacggaggaacacactcccaagatccaagccaataccaccagcccaacccaagtgg 36042984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7140781 - 7140729
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccac 53  Q
    |||| |||||| ||||||||| ||||||| ||||| | |||||||||||||||    
T  7140781 cgaatctgagagctcgaggaggagcacacacccagatcccaagccaataccac 7140729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 7286257 - 7286209
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    ||||||||||||| | |||| |||||||||||||| ||||| |||||||    
T  7286257 agcacactcccagatcccaaaccaataccactaggtcaacctaagtggg 7286209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34628714 - 34628666
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaata 49  Q
    |||||||||||| | |||||||| ||||||||||| | |||||||||||    
T  34628714 cgaacctgagactttgaggagaaacacactcccagatcccaagccaata 34628666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 38661951 - 38661915
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggt 37  Q
    ||||||||| || ||||||||||||||||||||||||    
T  38661951 cgaacctgaaacttcgaggagaagcacactcccaggt 38661915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43969002 - 43969074
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| ||||||||||  |||| |||||||||| | |  ||||||||||||||  | |||||||||||||||||    
T  43969002 cgaatctgagacctcagggaggagcacactcctaagccccaagccaataccatcatgccaacccaagtgggtt 43969074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36371542 - 36371468
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36371542 cgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 36371468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33700777 - 33700847
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33700777 cgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4566620 - 4566547
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||  |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4566620 cgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggttt 4566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 9165200 - 9165271
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9165200 gaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2220044 - 2219972
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||  |||||||||||||||    
T  2220044 cgaacctgagacctcgaggagaagcacactttcaggttccaagccaataccaccagaacaacccaagtgggtt 2219972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 40257470 - 40257398
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| ||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  40257470 gaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 40257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21547484 - 21547557
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||| ||||||||||| ||||| |||||| || |||||||||||||||||||||||||||||| |||||    
T  21547484 cgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactaggccaacccaagtcggttt 21547557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17745260 - 17745328
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    ||||| ||||||||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||||    
T  17745260 cgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 31794276 - 31794340
Alignment:
Q  9 agacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||| |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 50901648 - 50901581
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaa-taccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||| |||||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  50901648 tgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgggtt 50901581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8177186 - 8177260
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||||||| |||| |||||| ||||||||||||| | |||||||||||||||||||||||| ||| ||||||||    
T  8177186 cgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggtttc 8177260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6122866 - 6122793
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||| |||||||||||| || ||||||| ||||||||||| |||||||| |||||||    
T  6122866 cgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggttt 6122793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15786324 - 15786393
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||||||||||| |||||| ||||||||||||| | |||||||||||| ||||| |||||||||||||    
T  15786324 cgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19528331 - 19528403
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| |||||||||  || | ||||||||||||||| |||||||||||||||||||    
T  19528331 cgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 51703851 - 51703779
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||| || | |||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||||    
T  51703851 cgaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 52116786 - 52116857
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||| | |||||| |||||||||||| || ||||||||||||||| |||||||||||| ||||||    
T  52116786 gaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 44126462 - 44126396
Alignment:
Q  6 ctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggt 72  Q
    ||||||||||| |||| ||||||||||||||| ||| | ||||||||| ||||||||||||||||||    
T  44126462 ctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 35700020 - 35699959
Alignment:
Q  5 cctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    |||||||||| ||| ||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  35700020 cctgagaccttgagcagaagcacacttccagtttccaagtcaataccactaggccaacccaa 35699959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2799934 - 2799862
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| ||||||||||||| |  |||||| ||||||||||||||| | |||||||||    
T  2799934 cgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10526895 - 10526823
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| ||||||||| |||||| |||| |||||||||| |||||||||||||||| | ||||||||| ||||||    
T  10526895 cgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccactggaccaacccaaatgggtt 10526823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16169982 - 16170054
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||| |||| |||||| | ||||||||||||| ||||| ||||||||| |||| ||||||||||||||    
T  16169982 cgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 41508898 - 41508830
Alignment:
Q  6 ctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||| |||||| ||||||||||||| | |||| ||| |||||| ||||||||||||||||||||    
T  41508898 ctgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggttt 41508830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 25297842 - 25297771
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| ||||||||||||| ||||||||| ||| | | ||| |||||||||||| |||||||||||||||||    
T  25297842 aacctcagacctcgaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggttt 25297771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 25494080 - 25494147
Alignment:
Q  8 gagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||||||||||||||||| ||||| || | ||||||||||||||||||| |||  ||||||||||||    
T  25494080 gagacctcgaggagaagcaaactcctagatcccaagccaataccactaggtcaattcaagtgggtttc 25494147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6650667 - 6650593
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    |||||||||||| | |||||| |||| |||||| | | ||||||||||||||||||||||||| || ||||||||    
T  6650667 cgaacctgagacattgaggaggagcatactccccgatcccaagccaataccactaggccaacctaattgggtttc 6650593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1247185 - 1247112
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||| || ||||||||||||| |||  || |||||||| ||||||||||||| ||||    
T  1247185 cgaacctgagaccttgaggaggagtacactcccaggtttcaaatcagtaccactaagccaacccaagtgagttt 1247112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8904486 - 8904413
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||||||| |||||| ||||||||| ||  | ||||| |||||| |||||||||||||||||||||||    
T  8904486 cgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggttt 8904413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17410303 - 17410238
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    ||||| ||||| ||||||||| | ||||||||||| | |||| |||||||||||||||||||||||    
T  17410303 cgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggccaacccaa 17410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 21268005 - 21268070
Alignment:
Q  9 agacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||| |||||| |||||||||||| || |||||||||||| ||||| ||||| |||||||||||    
T  21268005 agacctagaggaggagcacactcccaagtcccaagccaatactactagcccaactcaagtgggttt 21268070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 28022138 - 28022191
Alignment:
Q  10 gacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacc 63  Q
    ||||||||||||||||||| |||||||| ||||||||||||||| ||| |||||    
T  28022138 gacctcgaggagaagcacaatcccaggtcccaagccaataccaccaggacaacc 28022191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51814566 - 51814493
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||| ||||||||| ||| |  |||| ||||||||  ||||||||||||||||||||    
T  51814566 cgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggttt 51814493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52336778 - 52336839
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaac 62  Q
    ||||||||||| ||  ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  52336778 cgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7743329 - 7743401
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| |||||||| |||||| | ||||||||||  |||| ||  ||||||||||||||||||||||||||||    
T  7743329 cgaacttgagacctagaggaggaccacactcccaaattcctagttaataccactaggccaacccaagtgggtt 7743401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16893466 - 16893394
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||| || |||||||||  |  |||||||||||||  ||| |||||||||||||||    
T  16893466 cgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggtcaacccaagtgggtt 16893394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 18459243 - 18459307
Alignment:
Q  9 agacctcgaggagaagcacactcccaggttccaagccaa-taccactaggccaacccaagtgggt 72  Q
    ||||||| ||||| |||||||||||| || ||||||||| ||||||||| |||||||||||||||    
T  18459243 agacctcaaggaggagcacactcccaagtcccaagccaattaccactagaccaacccaagtgggt 18459307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31383802 - 31383854
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccac 53  Q
    ||||||||||||| | ||||| ||||||||||||||| |||||||||||||||    
T  31383802 cgaacctgagaccccaaggaggagcacactcccaggtcccaagccaataccac 31383854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 45235389 - 45235457
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||| ||||||||| |||||||||||| || |||| |||||||||  || ||||||||||||||||||    
T  45235389 tgagatctcgaggaggagcacactcccaagtcccaaaccaataccatcagaccaacccaagtgggtttc 45235457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11063628 - 11063553
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttct 76  Q
    ||||||| |||||| |||||| | ||||||  ||||| ||||||||||||||||||  |||||||| |||||||||    
T  11063628 cgaacctaagaccttgaggaggaacacactttcaggtcccaagccaataccactagatcaacccaaatgggtttct 11063553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 15581147 - 15581217
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||  || || |||||||||| |||| ||||||||| ||||| |||||||||||||||||||    
T  15581147 gaacctgagacctttag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 15581217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 24730454 - 24730387
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||| ||||| || ||| ||||||||||||| |  |||| ||||||||||||||||||||||||||    
T  24730454 aacctgggaccttgaagaggagcacactcccagatctcaagacaataccactaggccaacccaagtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 37047054 - 37046984
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||| ||| || |||||||||| |||| ||||||||| ||||| || |||||||||||||||||    
T  37047054 aacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgggttt 37046984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 39012341 - 39012290
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||    
T  39012341 agcacactccaaggtcccaagccaacaccactaggccaaccaaagtgggttt 39012290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 952581 - 952511
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||| | |||||  ||||||||||||||| ||||||||| ||||| || ||||| ||||||||||    
T  952581 aacctgagactttgaggatgagcacactcccaggtcccaagccaacaccaccagaccaactcaagtgggtt 952511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 1094591 - 1094525
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||| |||| ||||||||| ||||||||||| ||||||||  |  ||||||||||||||||    
T  1094591 tgagacctcgtggaggagcacactcacaggttccaagtcaataccaacaaaccaacccaagtgggtt 1094525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21694515 - 21694446
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| ||||||   |||||||||| ||  |||||||||||||| ||| |||||||||||||||    
T  21694515 cgaacctgagaccttgaggag---cacactcccaagtctcaagccaataccaccaggtcaacccaagtgggtt 21694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 26232398 - 26232459
Alignment:
Q  9 agacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    ||||||| || || ||||||||||||| |  ||||||||||||||||| |||||||||||||    
T  26232398 agacctcaagcaggagcacactcccagatctcaagccaataccactagaccaacccaagtgg 26232459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1690081 - 1690153
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||| ||||| | || |||||||||| ||||||||||||||| || ||||  ||||||||||    
T  1690081 cgaacttgagacctcaaggaggaacagactcccaggtcccaagccaataccaccagaccaattcaagtgggtt 1690153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3265996 - 3265948
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaata 49  Q
    |||||||||||||| |||||| |||||||||||| |||||||| |||||    
T  3265996 cgaacctgagaccttgaggaggagcacactcccaagttccaagtcaata 3265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9117191 - 9117119
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||| ||||| |||||||| |||| | ||||||| ||||||   ||||||||||| ||||||    
T  9117191 cgaacctgagacctcaaggaggagcacacttccagatcccaagcccataccaaccggccaacccaaatgggtt 9117119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12259332 - 12259260
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| |||||| |||||||| ||||||||||||  | |||||  |||| ||||| |||||||||||||||||    
T  12259332 cgaacttgagacttcgaggaggagcacactcccaaatcccaagttaatatcactatgccaacccaagtgggtt 12259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14787340 - 14787408
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    ||||||||| |||| |||||||| ||||||| |||||  |||| ||||||||||||| |||| ||||||    
T  14787340 cgaacctgacaccttgaggagaaacacactctcaggtctcaagtcaataccactaggtcaactcaagtg 14787408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24047106 - 24047174
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    ||||| ||| ||||||||||| |||||||||||| ||  |||||||||||||  || ||||||||||||    
T  24047106 cgaacttgaaacctcgaggaggagcacactcccaagtctcaagccaataccatgagaccaacccaagtg 24047174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 4825041 - 4824970
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||| || ||| |||||||||| |||| ||||||||| ||||  || |||||||||||| ||||    
T  4825041 aacctgagaccttgaagaggagcacactccaaggtcccaagccaacaccatcagaccaacccaagtgtgttt 4824970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 30689083 - 30689012
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| ||||||||| ||||| |||| |||||||||| | ||||||||||||  ||| ||||| |||||||||    
T  30689083 gaacatgagacctcaaggaggagcaaactcccaggtcctaagccaataccatcagggcaacctaagtgggtt 30689012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 35187969 - 35187926
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    ||||||||| || |||||||| ||||||||||||||||||||||    
T  35187969 agcacactctcaagttccaagtcaataccactaggccaacccaa 35187926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 38978967 - 38979018
Alignment:
Q  22 aagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||| ||||  |||| |||||||||||||||||||||| ||||||    
T  38978967 aagcacactcctaggtctcaagtcaataccactaggccaacccaaatgggtt 38979018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 44486183 - 44486230
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||||||| ||||||||| |||| ||||||||||||| ||||||||    
T  44486183 agcacactccaaggttccaaaccaacaccactaggccaatccaagtgg 44486230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 8818142 - 8818196
Alignment:
Q  16 gaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    ||||||||||||||||||||||  |||| ||||||||  ||| ||||||||||||    
T  8818142 gaggagaagcacactcccaggtcacaagtcaataccatcaggtcaacccaagtgg 8818196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 19940878 - 19940948
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||  ||||| |||||||||| |||  |||||| || ||||| || ||||||||||||||||    
T  19940878 aacctgagaccttaaggaggagcacactccaaggacccaagctaacaccaccagaccaacccaagtgggtt 19940948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 24857852 - 24857906
Alignment:
Q  19 gagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| |||||| |||| || |||||| ||||| |||||||||||||||||||    
T  24857852 gagaagcccactccaaggtccctagccaacaccaccaggccaacccaagtgggtt 24857906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 12370229 - 12370192
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagc 44  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  12370229 tgagacctcgaggaggagcacactcccaggtcccaagc 12370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 36428778 - 36428717
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagt 68  Q
    |||||||| |||||| |||| ||||| |||| ||||||||| |||||  |||||||||||||    
T  36428778 tgagaccttgaggaggagcatactccaaggtaccaagccaacaccacccggccaacccaagt 36428717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9224847 - 9224779
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    ||||||||||||||| |||||||||| |||| ||| |  |||  ||||||||| || ||||||||||||    
T  9224847 cgaacctgagacctcaaggagaagcatactctcagatctcaaagcaataccaccagaccaacccaagtg 9224779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 11687629 - 11687701
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| |||||||||||  || |||||||| |||| | ||||| |||| ||||| | |||||||||||||||||    
T  11687629 gaacatgagacctcgaaaaggagcacacttccagatcccaagtcaatgccactggaccaacccaagtgggttt 11687701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12587342 - 12587294
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaata 49  Q
    ||||||||||||||||||||| ||||||||| ||| | ||||| |||||    
T  12587342 cgaacctgagacctcgaggaggagcacactcacagatcccaagtcaata 12587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 17297050 - 17296986
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    |||||||| |||||| |||||||||| |||| |||||| |  ||||| || ||||||||||||||    
T  17297050 tgagaccttgaggaggagcacactccaaggtcccaagctaccaccacaagcccaacccaagtggg 17296986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27567126 - 27567198
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| ||||||||| || ||| ||||||||| ||||||||||| ||||| ||   | ||||||||||||||||    
T  27567126 cgaatctgagaccttgaagaggagcacactctcaggttccaagtcaatatcatccgaccaacccaagtgggtt 27567198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 29056428 - 29056376
Alignment:
Q  23 agcacactcccaggttccaagccaa-taccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||| |||| |||| ||||||| | |||||||||||||||||    
T  29056428 agcacactcccaggtcccaaaccaaataccactggaccaacccaagtgggttt 29056376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 29817746 - 29817674
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||| || || ||| ||||||||| |||||  |||| ||||| ||| ||||||||||||||| ||||    
T  29817746 gaacctgagaacttgaagaggagcacactctcaggtctcaagtcaatatcaccaggccaacccaagtgagttt 29817674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30420382 - 30420310
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||  | |||||| |||||||||| |  | ||||||||| |||||| |||||||| |||||||||    
T  30420382 cgaacctgagatgttgaggaggagcacactcctatatcccaagccaaaaccacttggccaacctaagtgggtt 30420310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 35562789 - 35562745
Alignment:
Q  9 agacctcgaggagaagcacactcccaggttccaagccaataccac 53  Q
    ||||||||||||| |||||| || ||||| |||||||||||||||    
T  35562789 agacctcgaggaggagcacattctcaggtcccaagccaataccac 35562745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37400346 - 37400274
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||  ||||| ||||||||  |||||  |||||||||||||| || ||||||||||| ||||    
T  37400346 cgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 37400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 44046162 - 44046206
Alignment:
Q  11 acctcgaggagaagcacactcccaggttccaagccaataccacta 55  Q
    |||| |||||| ||||||||||||| | |||||||||||||||||    
T  44046162 accttgaggaggagcacactcccagatcccaagccaataccacta 44046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 94976 - 95044
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  94976 gaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26459414 - 26459486
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26459414 cgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43215256 - 43215183
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||| |||||||||| |||| |||||||||||||||||| |||||||||||||||||    
T  43215256 cgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggttt 43215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17113867 - 17113795
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  17113867 cgaacttgagaccttgaggagaagcacactcccaggttctaagccaatacaactaggccaccccaagtgggtt 17113795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20335835 - 20335907
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||||| |||| ||||||||||||||||    
T  20335835 cgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 39631916 - 39631844
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| |||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  39631916 cgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 25021345 - 25021416
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttctag 78  Q
    |||||| | |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttactag 25021416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 45709712 - 45709795
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttctagcttgaa 84  Q
    ||||||||||||||||||||| ||||||||| ||| | |||||| ||||||||||||||||||||| |||||||| | ||||||    
T  45709712 cgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggtttcaaacttgaa 45709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 23552190 - 23552116
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||| |||||||| |||||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  23552190 cgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtttc 23552116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 42836008 - 42836077
Alignment:
Q  4 acctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| ||| |||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42836008 acctgaggccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22760935 - 22760863
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| ||||||||||||||| ||||| ||||||||| || ||||||||||||||||    
T  22760935 cgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24513869 - 24513797
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||| |||||||| |||||||||  |  ||||||||||||||||||||||||||||||||||    
T  24513869 cgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30442560 - 30442488
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| |||||| |||||| |||| |||||||||| |||||||||||||||| ||||||||||||||||||    
T  30442560 cgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 48772010 - 48771938
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||| ||||| ||||||||||||| | ||||||||||||||| | |||||||||||||||||    
T  48772010 cgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 45559250 - 45559200
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45559250 agcacactccaaggttccaagccaataccactaggccaacccaagtgggtt 45559200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17041016 - 17041089
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||| |||||||| |||| | |||||||||| ||||||| |||||||||||||||||    
T  17041016 cgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggttt 17041089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30579407 - 30579334
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| ||||||  | ||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  30579407 cgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7801252 - 7801180
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| || ||| ||||||||||||||| ||||| ||||||||| ||||||| |||||||||||    
T  7801252 cgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43590979 - 43590907
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| | |||||| |||||||||||| || ||||||||||||||| |||||||||||| ||||||    
T  43590979 cgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 19553524 - 19553454
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||| |||||| |||||| ||||||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  19553524 gaacctaagaccttgaggaggagcacactcccaggt-ccaagccaataccaccaggccaacccaagcgggtt 19553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41487431 - 41487361
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| ||||||||   |||||||| || ||||||||||||||| ||||||||||||||||||||    
T  41487431 cgaacctgagaccttgaggagaa---cactcccaagtcccaagccaataccaccaggccaacccaagtgggttt 41487361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2446380 - 2446306
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||| ||||| ||||||||| |||||||||||| || ||||||||||||||  || ||||||||||||||||||    
T  2446380 cgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtttc 2446306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 5579240 - 5579310
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| |||||| |||||||||| |||| ||||||||| ||||| ||| |||||||||||||||    
T  5579240 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgggtt 5579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 18363766 - 18363696
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| |||||| ||||||||||||  |  |||||| |||||||||||||||||||||||||||    
T  18363766 aacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 23301612 - 23301678
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||| ||||| |||||||||||| || ||||| ||||||||| |||||||||||||||||||    
T  23301612 tgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14058325 - 14058252
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||  ||||||||| ||||||||||| ||||||||| |||||||| |||| ||||||    
T  14058325 cgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggttt 14058252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14368353 - 14368280
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||  ||||||||| ||||||||||| ||||||||| |||||||| |||| ||||||    
T  14368353 cgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggttt 14368280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15905678 - 15905746
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    ||||||||||||||  ||||| ||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  15905678 cgaacctgagaccta-aggaggagcacactcccaggtcccaagccaataccgccaggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42712030 - 42711957
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||||||| |||||| |||||||||||| || |||||| |||||||||| ||||||||||||| ||||    
T  42712030 cgaacatgagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaacccaagtgagttt 42711957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 45976943 - 45976996
Alignment:
Q  17 aggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||||||||    
T  45976943 aggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2962531 - 2962460
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||| || |||||| ||||||||| |||||||||| ||||||||||||| |||| |||||||||||    
T  2962531 cgaacctgagatcttgaggaggagcacactcacaggttccaaaccaataccactagaccaa-ccaagtgggtt 2962460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23945933 - 23945857
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttcta 77  Q
    ||||||||||||||| | ||| |||||| || ||||||| ||| |||||||| |||| |||||||||||||||||||    
T  23945933 cgaacctgagacctcaatgaggagcacattctcaggttctaagtcaataccattaggtcaacccaagtgggtttcta 23945857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25590683 - 25590611
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||| |||||||||||||| ||||||||||||| |  |||||||||||||  ||| |||||||||||||||    
T  25590683 cgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31835264 - 31835192
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| |||||||||| ||   ||||||||| ||||| |||||||||||||||||||    
T  31835264 cgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33869449 - 33869521
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||| ||||||| ||| || |||||||| ||||||  ||||||||||| ||||||||||||||||||||||    
T  33869449 cgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggtt 33869521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 39499747 - 39499795
Alignment:
Q  25 cacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  39499747 cacactcacaggtcccaagccaataccactaggccaacccaagtgggtt 39499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7499928 - 7499995
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagt 68  Q
    ||||||||||||||||| ||| |||| |||| ||||| ||||||||||| |||||||| |||||||||    
T  7499928 cgaacctgagacctcgaagaggagcaaactctcaggtcccaagccaatatcactaggctaacccaagt 7499995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 25956298 - 25956368
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||| |||||| ||| || |||||||||| |||| |||||||||||||||||||||||||||| ||||||    
T  25956298 gaacctaagaccttgag-aggagcacactccaaggtcccaagccaataccactaggccaacccaaatgggtt 25956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 27776243 - 27776172
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||| |||||||| ||||||||| || || ||||||  ||||||| |||||||||||||||||||    
T  27776243 gaacctgagacttcgaggaggagcacactctcaagtcccaagcgtataccaccaggccaacccaagtgggtt 27776172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 35328896 - 35328951
Alignment:
Q  19 gagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||  |||||||||||||| ||||| ||||||||||||||||||||    
T  35328896 gagaagcacactcgaaggttccaagccaacaccaccaggccaacccaagtgggttt 35328951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38374603 - 38374678
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttct 76  Q
    ||||||| |||||| |||||| |||||||||  |||| ||||||||| ||||| | ||||||||||||||||||||    
T  38374603 cgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaagtgggtttct 38374678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41519268 - 41519335
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagt 68  Q
    |||||||||||||| |||||| |||||||||| |  | ||||| ||||||||||||||||||||||||    
T  41519268 cgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 5273596 - 5273666
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| |||||| |||||| |||||||||  |||| ||||||||| ||||| |||||||||||||||||||    
T  5273596 aacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 22927541 - 22927477
Alignment:
Q  8 gagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggt 72  Q
    |||||||  |||||||||||||||| || | |||||  |||||||||||||||||||||||||||    
T  22927541 gagacctttaggagaagcacactcctagatcccaagttaataccactaggccaacccaagtgggt 22927477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26199581 - 26199509
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||| ||| | ||| || ||| || ||||| |||||||||||||||||||||||| ||||||||||    
T  26199581 cgaacctgagatctcaaagaggagtacattctcaggtcccaagccaataccactaggccaactcaagtgggtt 26199509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 35513538 - 35513467
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggt 72  Q
    ||||| |||||  |||||||| ||||||||| || || |||||| ||||||||||||||||||||| |||||    
T  35513538 cgaacatgagatatcgaggaggagcacactctcaagtcccaagcaaataccactaggccaacccaaatgggt 35513467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 3280495 - 3280561
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||| |||||| ||||||||| | ||| ||||||||||||||| | | |||||||||||||||    
T  3280495 tgagaccttgaggaggagcacactctcgggtcccaagccaataccaccatgtcaacccaagtgggtt 3280561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 15137623 - 15137553
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| |||||| |||||||||| |  | ||||| || |||||| |||||||||||||||||||    
T  15137623 aacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 21854616 - 21854550
Alignment:
Q  5 cctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    |||||||| | |||||| ||||||||||||| | || |||||||||||  |||||||||||||||||    
T  21854616 cctgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21877880 - 21877814
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaag 67  Q
    ||||| ||||||||  ||||| ||||| ||||||||| ||||| |||||||||||||||||| ||||    
T  21877880 cgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtcaataccactaggccaactcaag 21877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 11720980 - 11721037
Alignment:
Q  17 aggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||||| |||||||| ||||||||||||||| ||||||||| |||| |||||    
T  11720980 aggaggagcacattcccaggtcccaagccaataccaccaggccaaccgaagttggttt 11721037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33181214 - 33181287
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||| || |||  | |||||||||||| || ||||||| ||||||||||| |||||||| |||||||    
T  33181214 cgaacctgagatcttgagttggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggttt 33181287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 37085553 - 37085618
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    ||||||||| ||||||||||  ||||||||||||  | ||||||||||||||| | ||||||||||    
T  37085553 cgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaataccaccatgccaacccaa 37085618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43663099 - 43663168
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    ||||||||||| ||||||||| | ||| |||| |||| ||||| ||||||||  ||||||||||||||||    
T  43663099 cgaacctgagatctcgaggaggaccacgctcctaggtcccaagtcaataccatcaggccaacccaagtgg 43663168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 7744118 - 7744186
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    |||||||||||| |||||| |||| | |||||| | | ||||| ||||||||||||||||| |||||||    
T  7744118 aacctgagaccttgaggaggagcatagtcccagatcctaagcctataccactaggccaacctaagtggg 7744186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 28236592 - 28236636
Alignment:
Q  8 gagacctcgaggagaagcacactcccaggttccaagccaatacca 52  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||    
T  28236592 gagacctcgaggaggagcgcactcccaggtcccaagccaatacca 28236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 29385749 - 29385817
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    |||||||||||| |||||| |||||||||| | || ||||||||| ||||   ||||||||||||||||    
T  29385749 aacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatccggccaacccaagtggg 29385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 4566434 - 4566501
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||||||||| ||| || |  ||||||| |||| | ||| ||||||||||||||||||||||||||    
T  4566434 aacctgagaccttgagaaggaatacactccaaggtccgaagtcaataccactaggccaacccaagtgg 4566501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 5668579 - 5668626
Alignment:
Q  5 cctgagacctcgaggagaagcacactcccaggttccaagccaatacca 52  Q
    ||||||||||||||||| |||||||| ||| || ||||||||||||||    
T  5668579 cctgagacctcgaggaggagcacacttccatgtcccaagccaatacca 5668626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 26703196 - 26703149
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaata 49  Q
    ||||||||||||||||| || ||||||||||||| | |||||||||||    
T  26703196 gaacctgagacctcgagaaggagcacactcccagatcccaagccaata 26703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33222442 - 33222387
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactag 56  Q
    |||||||||||||| |||||  || ||||| |||||| ||||||||||||||||||    
T  33222442 cgaacctgagaccttgaggatgagtacacttccaggtcccaagccaataccactag 33222387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 48125195 - 48125250
Alignment:
Q  18 ggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| |||||||||| |||| ||||||||| ||||| || ||||||||||||||||    
T  48125195 ggaggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgggtt 48125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7721441 - 7721367
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||| |||||||| |||||| || |||||||||||| |||| ||||||||||| | ||| ||||| ||| ||||    
T  7721441 cgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaataccacttgaccaccccaaatggatttc 7721367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 18011356 - 18011426
Alignment:
Q  4 acctgagacctcgaggagaagcacactcccaggttccaagccaa-taccactaggccaacccaagtgggtt 73  Q
    ||||||||||||  |||| ||||||||| |||||  |||||||| ||||| ||||||||||||| ||||||    
T  18011356 acctgagacctcatggaggagcacactctcaggtctcaagccaattaccattaggccaacccaactgggtt 18011426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 20952168 - 20952222
Alignment:
Q  16 gaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||| ||||||||||||||| |||| |||||||||  ||| ||||||||||||    
T  20952168 gaggaggagcacactcccaggtcccaaaccaataccatcaggtcaacccaagtgg 20952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 22932741 - 22932787
Alignment:
Q  27 cactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||| ||||||||||||||| |  ||||||||||||||||    
T  22932741 cactcccaggtcccaagccaataccaccataccaacccaagtgggtt 22932787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 23735237 - 23735303
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||| | |||||| |||||| |||||  ||| ||||||||||||||||  |||||||||||||||    
T  23735237 tgagactttgaggaggagcacaatcccaaattctaagccaataccactagatcaacccaagtgggtt 23735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 36803646 - 36803696
Alignment:
Q  16 gaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    |||||| |||| |||||||||| ||||| |||||||||||| |||||||||    
T  36803646 gaggaggagcatactcccaggtcccaagtcaataccactagaccaacccaa 36803696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 44146577 - 44146623
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    |||||||||| |||| |||| |||| |||||||||||||||||||||    
T  44146577 agcacactccaaggtcccaaaccaacaccactaggccaacccaagtg 44146623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 5830622 - 5830679
Alignment:
Q  16 gaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||| || ||||||||||||||||| |||||| |||| | ||||||||| ||||||    
T  5830622 gaggaggagtacactcccaggttccaaaccaatatcactggaccaacccaactgggtt 5830679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18056779 - 18056852
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||  ||||| |||||||||| | |  ||||| ||||||||| || | |||||||||||||||    
T  18056779 cgaacctgagaccttcaggaggagcacactccgaagacccaagtcaataccaccagactaacccaagtgggttt 18056852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25655232 - 25655305
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||| |||| |||||| | ||||||| ||| | ||||| |||||||||||  |||||||| ||||||||    
T  25655232 cgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgggttt 25655305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35119455 - 35119382
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||| | || |||||  |||| || ||||| | ||||| |||||||||||||||||||||| |||||||    
T  35119455 cgaacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccactaggccaacccaaatgggttt 35119382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 37233580 - 37233648
Alignment:
Q  5 cctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||  ||||| ||||||||||||  | ||||||||||| ||| | | |||||||||||||||    
T  37233580 cctgagaccttaaggaggagcacactcccacatcccaagccaatatcaccaagtcaacccaagtgggtt 37233648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 44628193 - 44628257
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    |||||| | |||||| |||||||||| |||| |||||| || | ||| |||||||||||||||||    
T  44628193 tgagactttgaggaggagcacactccaaggtcccaagctaacaacaccaggccaacccaagtggg 44628257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 48079713 - 48079653
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaa-taccactaggccaac 62  Q
    |||||||||||||||| || | ||||| ||||||| ||||||||| ||||| |||||||||    
T  48079713 aacctgagacctcgagcaggaccacacacccaggtcccaagccaattaccagtaggccaac 48079653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37109355 - 37109427
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37109355 cgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7292802 - 7292871
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||||||||| | |||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  7292802 cgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19238581 - 19238653
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||| |||||||||||||| |||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  19238581 cgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 55427204 - 55427276
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||||||| || |||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  55427204 cgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 7949458 - 7949532
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    |||||||||||||| |||||| |||||||||| |||| ||||||||||||| |||||||| ||||||||||||||    
T  7949458 cgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggccagcccaagtgggtttc 7949532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2185036 - 2185110
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaaccc-aagtgggttt 74  Q
    |||||||||||| | ||| || |||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  2185036 cgaacctgagactttgagaaggagcacactcccaggttccaagccattaccactaggccaacccgaagtgggttt 2185110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37274463 - 37274536
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaa-taccactaggccaacccaagtgggtt 73  Q
    ||||||| |||||| |||||| ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  37274463 cgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactaggccaacccaagtgggtt 37274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37720218 - 37720291
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||| ||||| ||||||  |||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  37720218 cgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggttt 37720291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9241029 - 9241101
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| |||||||||| || |||||||| |||| | ||||||||||||||| |||||||||||||||||||    
T  9241029 cgaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31759662 - 31759734
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| ||||||||| |||||| |||||||||||| || ||||||||||||||||||  |||||||||||||||    
T  31759662 cgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 39509142 - 39509070
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||| |||||  || ||||||||||||||||    
T  39509142 cgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46545783 - 46545711
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| |||||| || |||||| ||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  46545783 cgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2622399 - 2622475
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagcc----aataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| | |||||| ||||||||||||||| |||||||    ||||||||||||||||||||||||||||    
T  2622399 cgaacctgagacatggaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtgggtt 2622475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 27965537 - 27965587
Alignment:
Q  24 gcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggttt 27965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 51250526 - 51250600
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||| ||||| || |||| | ||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  51250526 cgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggtttc 51250600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12798756 - 12798683
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||| ||||||||||| ||||||||||||| |  ||| ||||||||||| || ||||||||||||||||    
T  12798756 cgaacctgaaacctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgggttt 12798683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 16581764 - 16581711
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccacta 55  Q
    ||||||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  16581764 gaacctgagaccttgaggaggagcagactcccaggttccaagccaataccacta 16581711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19680792 - 19680865
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||| |||||| |||||  |||||||||||| || |||||| |||||||||||||||| ||||||||||||    
T  19680792 cgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggttt 19680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24827897 - 24827824
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||| |||||||||  | |||||| ||||||||||    
T  24827897 cgaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaataccaccggaccaaccaaagtgggttt 24827824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38869840 - 38869783
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggc 58  Q
    |||||||||||||| |||||| ||||||||||||| | ||||||||||||||||||||    
T  38869840 cgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 49576898 - 49576963
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    |||||||||||||| |||||| |||||||||||| || | ||||||||||||| ||||||||||||    
T  49576898 cgaacctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8030208 - 8030280
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| |||||||| |||||| |||||||||||| || ||||||| ||||||||||| ||| |||||||||||    
T  8030208 cgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17618353 - 17618281
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||||||||| |||||||||||||||  |||||||||||||| | |||  ||||||||||||    
T  17618353 cgaacatgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaagccggcccaagtgggtt 17618281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 47044789 - 47044717
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||| |||| |||| ||| | ||||| ||||||||| ||||||| |||||||||||    
T  47044789 cgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 1730498 - 1730565
Alignment:
Q  6 ctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| | || ||| ||||||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  1730498 ctgagactttgaagaggagcacactctcaggtcccaagccaataccactaggtcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 13901813 - 13901746
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    |||| ||||||||| ||||| | |||||||||||||  ||||||||||||||||| ||||||||||||    
T  13901813 gaacttgagacctcaaggaggaacacactcccaggtctcaagccaataccactagaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 41683799 - 41683752
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  41683799 agcacactctcaggttccaagccaataccactaggtcaacccaagtgg 41683752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23378028 - 23377974
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccacta 55  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||    
T  23378028 cgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataacacta 23377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 33438497 - 33438551
Alignment:
Q  16 gaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||||| || ||| ||||||||||||||||||||||||| |||||||||||||    
T  33438497 gaggagaaacatacttccaggttccaagccaataccactagaccaacccaagtgg 33438551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9936965 - 9937037
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||| || |||||||| |||||||||||| ||  |||| | |||||||||||||||||||||| ||||    
T  9936965 cgaacctgaaacttcgaggaggagcacactcccaagtctcaagtcgataccactaggccaacccaagtaggtt 9937037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 28635768 - 28635696
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| ||||||| ||||| ||||||||||||| | ||||| || |||||| ||| |||||||||||||||    
T  28635768 cgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31826681 - 31826609
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| |||||||| |||||| ||||||||| ||  | ||||||| ||||||||||| |||||||||||||||    
T  31826681 cgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggtt 31826609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 40283992 - 40284060
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    ||||| |||||| ||||||| ||||||||||| || ||||||||||||||  | |||||||||||||||    
T  40283992 aaccttagaccttgaggagatgcacactcccaagtcccaagccaataccatcatgccaacccaagtggg 40284060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13015499 - 13015444
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactag 56  Q
    ||||| |||||| |||||||| |||||||||||| || ||||||||||||||||||    
T  13015499 cgaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccactag 13015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 29195145 - 29195094
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||| |||| ||||||||| ||||| ||||||||||||||||||||    
T  29195145 agcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggttt 29195094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30938223 - 30938278
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactag 56  Q
    ||||||||||||||||||||| |||||||||| || | |||| |||||||||||||    
T  30938223 cgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccactag 30938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 37443749 - 37443702
Alignment:
Q  26 acactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||| | ||||||||||||||||||| |||||||||||||||    
T  37443749 acactcccagatcccaagccaataccactaggtcaacccaagtgggtt 37443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 51948551 - 51948480
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||  ||||||||| || | ||||| |||||| || ||| |||||||||||||||    
T  51948551 gaacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 4249247 - 4249177
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| |||||| |||||||||| |  | ||||||| ||||||||||||||| | |||||||||    
T  4249247 aacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactaggccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 5795415 - 5795485
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| |||||| |||| ||||| |||| ||||| ||| ||||| || ||||||||||||||||    
T  5795415 aacctgagaccttgaggaggagcatactccaaggtgccaagtcaacaccaccagaccaacccaagtgggtt 5795485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 78
Target Start/End: Complemental strand, 21434843 - 21434806
Alignment:
Q  41 aagccaataccactaggccaacccaagtgggtttctag 78  Q
    |||||||||||||||||||||||||| |||||||||||    
T  21434843 aagccaataccactaggccaacccaaatgggtttctag 21434806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21660148 - 21660221
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| ||||||||||||||  ||||||||||||| |  |||| ||||||||| || ||||||||||| |||||    
T  21660148 cgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggttt 21660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21668912 - 21668985
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| ||||||||||||||  ||||||||||||| |  |||| ||||||||| || ||||||||||| |||||    
T  21668912 cgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggttt 21668985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41346967 - 41347036
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||||||||| |||||||| |||| |||||||| |  ||| |||||||||  ||||||||||||||||    
T  41346967 cgaacctgagacttcgaggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19229212 - 19229283
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||| |||||| | | | || ||| ||||||||||| |||||||||||| ||||||    
T  19229212 cgaacctgagacctcgaggaggagcaca-ttctaagtcccaggccaataccaccaggccaacccaaatgggtt 19229283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37980152 - 37980219
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    |||||||||||||| ||| || |||||||||| |||| ||||||||| | ||| |||||||||||||||    
T  37980152 cgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacatcaccaggccaacccaagtg 37980219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46295169 - 46295097
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| |||||||||| | || ||||||||| || || || |||||| |||||||||    
T  46295169 cgaacctgagaccttgaggaggagcacactccaatgtcccaagccaacactaccagaccaacctaagtgggtt 46295097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 47202433 - 47202473
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaa 47  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  47202433 tgagaccttgaggaggagcacactcccaggttccaagccaa 47202473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 56410022 - 56409951
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| ||| || |||||||||| |||| ||||||||| | ||| |||||| ||||||||||||    
T  56410022 cgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacagcaccaggccagcccaagtgggtt 56409951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 13265128 - 13265179
Alignment:
Q  17 aggagaagcacactcccaggttccaagccaataccactaggccaacccaagt 68  Q
    ||||| |||||| |||||||| ||||||||||||| |||||||||| |||||    
T  13265128 aggaggagcacattcccaggtcccaagccaatacctctaggccaactcaagt 13265179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 15180788 - 15180741
Alignment:
Q  26 acactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| |||||||||||||||||| |||| | |||||||||    
T  15180788 acactcccaggtcccaagccaataccactagaccaatctaagtgggtt 15180741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 25434665 - 25434733
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| ||| ||||||||||||| |||| ||||||| | ||||| |||||||||||| ||||||    
T  25434665 aacctgagaccttgag-agaagcacactccaaggtcccaagcc-acaccaccaggccaacccaattgggtt 25434733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 38206132 - 38206201
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| ||| || |||||||||| |||| ||||||||  ||||| ||| |||||||||||||||    
T  38206132 aacctgagaccttgag-aggagcacactccaaggtcccaagccagcaccaccaggtcaacccaagtgggtt 38206201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 42281240 - 42281309
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| ||| || |||||||| | |||| ||||||||| |||||  ||||||||||||||||||    
T  42281240 aacctgagaccttgag-aggagcacactacaaggtcccaagccaacaccacctggccaacccaagtgggtt 42281309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 13496306 - 13496241
Alignment:
Q  8 gagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||| ||| | ||||||| || || ||||| ||||||||| | |||||||||||||||||    
T  13496306 gagacctcgaagaggaacacactcacatgtcccaagtcaataccaccatgccaacccaagtgggtt 13496241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 29312272 - 29312321
Alignment:
Q  17 aggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    ||||| || |||||||||  | ||||||||||||||||||||||||||||    
T  29312272 aggaggagaacactcccacatcccaagccaataccactaggccaacccaa 29312321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 55256203 - 55256275
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactagg-ccaacccaagtgggtt 73  Q
    |||||||||| ||| |||| |||||||||||| | ||  |||||||||||||| ||| ||||||||||||||||    
T  55256203 cgaacctgaggccttgagg-gaagcacactccaatgtcacaagccaataccaccaggcccaacccaagtgggtt 55256275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 4923617 - 4923549
Alignment:
Q  6 ctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||| || ||  ||||||||  || ||||||| |||||| |||||||||||||||||| |||||    
T  4923617 ctgagaccttgacgatgagcacactttcaagttccaaaccaataacactaggccaacccaagtaggttt 4923549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5450165 - 5450117
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaata 49  Q
    |||| |||| |||| |||||| ||||||||||||| |||||||||||||    
T  5450165 cgaatctgaaaccttgaggaggagcacactcccagattccaagccaata 5450117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8325383 - 8325455
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| |||||| |||||  |||||||||| ||||  |||||||| |||||  | ||||||||||||||||    
T  8325383 cgaacctaagaccttgaggatgagcacactccaaggtctcaagccaacaccaccggcccaacccaagtgggtt 8325455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 21344887 - 21344816
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| |||||||| ||| || |||||||||| |||| ||||||||| | ||  ||||||||||||||||||||    
T  21344887 gaacatgagaccttgag-aggagcacactccaaggtcccaagccaacatcatcaggccaacccaagtgggttt 21344816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24234717 - 24234649
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    ||||| ||||||||  ||||  |||||||||||| || |||||||||||||||  || |||||||||||    
T  24234717 cgaacttgagaccttcaggatgagcacactcccaagtcccaagccaataccacctggacaacccaagtg 24234649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33619278 - 33619206
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| ||||||| ||||| | ||| ||||||| | | ||||||||||||| | | |||||||||||||||    
T  33619278 cgaacctaagacctcaaggaggaccacgctcccagatcctaagccaataccaccaaggcaacccaagtgggtt 33619206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 40285687 - 40285623
Alignment:
Q  9 agacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| | ||| ||||||||||||| ||||||  ||||||||| | |||||| ||||||||||    
T  40285687 agacctcaaagaggagcacactcccagattccaaatcaataccaccatgccaactcaagtgggtt 40285623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 44194989 - 44195053
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    |||| |||||||| ||| |||| |||||| |||| |||||| ||||||||||| | |||||||||    
T  44194989 gaacatgagaccttgagaagaaacacacttccagattccaaaccaataccactggaccaacccaa 44195053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46329236 - 46329192
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagcc 45  Q
    ||||||||| |||| |||||| ||||||||||||||| |||||||    
T  46329236 cgaacctgataccttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42327399 - 42327471
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42327399 cgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 11062430 - 11062360
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  11062430 aacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggtt 11062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29503343 - 29503270
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  29503343 cgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggttt 29503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42922487 - 42922414
Alignment:
Q  1 cgaacctgagacctc-gaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42922487 cgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 39715064 - 39714990
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| | |||||||||||||||||||    
T  39715064 cgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggtttc 39714990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4060218 - 4060291
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||| || |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  4060218 cgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaataccactaggccaacccaagtgggttt 4060291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37480147 - 37480074
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||    
T  37480147 cgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23052527 - 23052599
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||||||||| |||||||||    
T  23052527 cgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40416394 - 40416466
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||  ||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  40416394 cgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 42602624 - 42602553
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||||| ||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42602624 aacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 42602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21195680 - 21195753
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||| |||||||| |||||||    
T  21195680 cgaacctgagaccttgaggaggagcacactcccaagttccaagcctataccactagggcaacccaaatgggttt 21195753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 1729880 - 1729815
Alignment:
Q  9 agacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||| |||||| |||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  1729880 agacctagaggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggttt 1729815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7799039 - 7799112
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| |||||| ||||||||| |||||||||||| || ||||||||||||||| ||| ||||||||||||||||    
T  7799039 cgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgggttt 7799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 11251157 - 11251084
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttct 76  Q
    |||||||||||| |||||| |||||||| ||| || ||||||||||||||||| ||||||| ||||||||||||    
T  11251157 aacctgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagccaacctaagtgggtttct 11251084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 16918584 - 16918653
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggt 72  Q
    ||||| |||||| |||||| ||||||||||||| | |||| |||||||||||||||||||||||||||||    
T  16918584 aacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 28846763 - 28846691
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||  ||||| |||||||||    
T  28846763 cgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgggtt 28846691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 34041594 - 34041665
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||| |||||| ||||||||| ||| | | ||| ||||||||||||||||||||||||||||||    
T  34041594 aacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggttt 34041665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 37755975 - 37756046
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggt 72  Q
    ||||| |||||||||||| || |||||| |||||||| ||||||||||||||| | ||||||||||||||||    
T  37755975 cgaacttgagacctcgagtaggagcacattcccaggtcccaagccaataccaccaagccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21213841 - 21213768
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||| ||||| | ||||||||||||| ||||||||||||||| || |||||||| | ||||||    
T  21213841 cgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccaccagaccaacccatgcgggttt 21213768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19244181 - 19244109
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| | |||| ||||||||| ||||| ||||| |||||||| ||| ||||||||||||||||    
T  19244181 cgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 1435131 - 1435064
Alignment:
Q  6 ctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||| ||||||||||||||||| |  | |||||||| |||||||| |||||||||||||||||    
T  1435131 ctgagaccttgaggagaagcacactcctaaatcccaagccagtaccactatgccaacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 19322838 - 19322767
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| ||||||| || ||| ||||||||||||||| |||| |||||||||||||  ||||||||||||||||    
T  19322838 aaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgggttt 19322767  T

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Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12086133 - 12086203
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    |||||| ||||||| |||||| |||||||| |||||| ||||||||||||||| ||||||||  |||||||    
T  12086133 cgaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccaccaggccaacttaagtggg 12086203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 19016097 - 19016031
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||| |||||||||||| ||  |||||||||||||  || ||||||||||||||||    
T  19016097 tgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3001451 - 3001378
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||| ||| ||||| |||||||||| || |  |||| ||||||||||||||||||||||||| ||||    
T  3001451 cgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtgagttt 3001378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14500349 - 14500276
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| ||||||||| |||||| ||||||||||||| |  |||||  ||||||||||||||| ||||||||||||    
T  14500349 cgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggttt 14500276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25931078 - 25931005
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| ||||||| ||||||| || ||||||| ||||| |||| |||||||||| |||||||||||| |||||||    
T  25931078 cgaatctgagacttcgaggataaacacactctcaggtcccaaaccaataccaccaggccaacccaaatgggttt 25931005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29197380 - 29197453
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||||| || ||||| |||||||||||| || ||||| ||||||||| | ||||||||||||||||||    
T  29197380 cgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggttt 29197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12994380 - 12994452
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||  ||||| ||||||||||||||| ||||| |||||||||||| ||||| |||| |||||    
T  12994380 cgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggtt 12994452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42860420 - 42860348
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||||||||| |||||||||||||||  |||| ||||| ||| |||||||| ||||| ||||    
T  42860420 cgaacttgagacctcgaggaggagcacactcccaggtctcaagtcaatatcaccaggccaactcaagtaggtt 42860348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 30359720 - 30359657
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||||| |||||| |||||||||| |||| ||||||||| ||||| | ||||||||||||||    
T  30359720 tgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaagccaacccaagtgg 30359657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 16381668 - 16381730
Alignment:
Q  11 acctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| |||||| || |||||| ||| | ||||||| |||||||||||||||||||||||||||    
T  16381668 accttgaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggtt 16381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33569862 - 33569936
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaa-taccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||||||||  |||||||| ||| || | ||||||| |||||||| ||||||||| ||||||||    
T  33569862 cgaacctgagacctcgaggaagagcacacttccaagtcctaagccaattaccactaagccaacccatgtgggttt 33569936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 33962795 - 33962857
Alignment:
Q  8 gagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||| ||||||||| ||||||||||||| | |||| |||||| || |||||||||||||||||    
T  33962795 gagatctcgaggaggagcacactcccagttcccaaaccaatatcattaggccaacccaagtgg 33962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6658454 - 6658393
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaac 62  Q
    ||||| |||||| | ||||||||||||||| ||||||| ||| |||||| ||||||||||||    
T  6658454 cgaacatgagactttgaggagaagcacacttccaggttacaaaccaatatcactaggccaac 6658393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4262306 - 4262354
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaata 49  Q
    |||||||||||||| |||||| |||||||| |||||| |||||||||||    
T  4262306 cgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4438983 - 4439055
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| || ||||| |||||| ||||||||| ||| | |||||  ||||||| ||||||||||||||||||||    
T  4438983 cgaacatgcgaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13803567 - 13803495
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| |||||||||| | ||  |||||||||| ||||||  |||||||| ||||||    
T  13803567 cgaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcactagatcaacccaaatgggtt 13803495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41908642 - 41908714
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| |||||||| |||||| |||||||||| ||||  ||| || | ||||| |||||||||||||||||||    
T  41908642 cgaacttgagaccttgaggaggagcacactccaaggtctcaaaccgacaccaccaggccaacccaagtgggtt 41908714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 45672383 - 45672455
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||| |||||| | || ||||| ||||  |||| ||| ||||| ||||||||||||||||||||    
T  45672383 gaacctgagacctagaggaggaacatactccaaggtctcaaggcaaaaccacaaggccaacccaagtgggttt 45672455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13519056 - 13519131
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactccc-aggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||| ||||||||| ||||| ||||||| ||| |  |||||| ||||||||||||||||||||||| ||| ||||    
T  13519056 cgaacttgagacctcaaggaggagcacaccccccaaattccaaaccaataccactaggccaacccaaatggatttc 13519131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 24191904 - 24191842
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    ||||| ||| ||||| ||||||||| ||||| ||||||||||||||  |||||||| ||||||    
T  24191904 tgagatctcaaggaggagcacactctcaggtcccaagccaataccatcaggccaactcaagtg 24191842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 26545906 - 26545840
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| || |||||||| |||| | |||||| |||||||| |  ||||||||||||||||    
T  26545906 tgagacctcgagaaggagcacacttccagatcccaagctaataccaccaaaccaacccaagtgggtt 26545840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 29964872 - 29964822
Alignment:
Q  16 gaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    |||||| ||||  |||||||||| |||||||||||||||||| ||||||||    
T  29964872 gaggaggagcatgctcccaggtttcaagccaataccactaggtcaacccaa 29964822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30410553 - 30410607
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccacta 55  Q
    ||||| |||| ||| |||||| |||||||||| |||| |||||||||||||||||    
T  30410553 cgaacatgagtccttgaggaggagcacactcctaggtcccaagccaataccacta 30410607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 32106616 - 32106566
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||| |||| ||||| ||| ||||| |||||||||||||||||||    
T  32106616 agcacactccaaggtcccaagtcaacaccaccaggccaacccaagtgggtt 32106566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3697404 - 3697476
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||| ||||||| ||| || ||||| |||| |||| ||||||||||||||  || |||||||||||||||||    
T  3697404 cgaaccagagaccttgag-aggagcactctccaaggtcccaagccaataccatcagaccaacccaagtgggttt 3697476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 5147690 - 5147755
Alignment:
Q  8 gagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| ||| || |||| |||||||| |  |||| |||||||||||| ||||||||||||||||    
T  5147690 gagaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggtt 5147755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 73
Target Start/End: Original strand, 9318121 - 9318150
Alignment:
Q  44 ccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||||||||||||    
T  9318121 ccaataccactaggccaacccaagtgggtt 9318150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 12982513 - 12982566
Alignment:
Q  14 tcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaag 67  Q
    |||||||| ||||||||  |||||  ||| ||||||||||||||||||||||||    
T  12982513 tcgaggaggagcacacttgcaggtctcaatccaataccactaggccaacccaag 12982566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30808651 - 30808724
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| ||||||||| |||||| |||| | || |||||  |||||||||| ||| || |||||||||||||||||    
T  30808651 cgaaactgagaccttgaggaggagcatattctcaggtctcaagccaatatcaccagaccaacccaagtgggttt 30808724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32687553 - 32687484
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    ||||||||||||||||||||| | ||||||| || || |||| | |||||||| ||  ||||||||||||    
T  32687553 cgaacctgagacctcgaggaggaacacactctcaagtcccaaactaataccacaagaacaacccaagtgg 32687484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38854466 - 38854539
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| ||||||| | |||||| |||||  |||| ||| ||||||| |||||| ||| |||||||    
T  38854466 cgaacctgagaccttgaggagaggtacactctcaggtctcaagtcaaaaccactaagccaacacaaatgggttt 38854539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12801361 - 12801293
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    |||||||||||| | |||||| |||| || ||||| | |||| | ||||||||||||||||| ||||||    
T  12801361 cgaacctgagactttgaggaggagcatacccccagatcccaaactaataccactaggccaactcaagtg 12801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16525249 - 16525178
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| ||| ||  ||||||||| | || ||||||||| ||||  |||||||||||||||||||    
T  16525249 cgaacctgagaccttgag-agtcgcacactccaacgtcccaagccaacaccatcaggccaacccaagtgggtt 16525178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29996464 - 29996536
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||  ||| | || ||| || || ||||||||| |||||||||||||||| | |||||||||    
T  29996464 cgaacctgagaccttaaggcggagtacattcacatgttccaagctaataccactaggccaatctaagtgggtt 29996536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 43964014 - 43964066
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    |||||||||| |||| |||| |||| || ||||| ||||||||||||||||||    
T  43964014 agcacactccaaggtcccaaaccaacactactagaccaacccaagtgggtttc 43964066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 45672234 - 45672306
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||| |||||| | || ||||| ||||  |||| ||| ||||| ||||||| ||||||||||||    
T  45672234 gaacctgagacctagaggaggaacatactccaaggtctcaaggcaaaaccacaaggccaatccaagtgggttt 45672306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 27093367 - 27093438
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27093367 aacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggttt 27093438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16354896 - 16354968
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||  |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16354896 cgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8051286 - 8051213
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||    
T  8051286 cgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggttt 8051213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10445143 - 10445216
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaa-taccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  10445143 cgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactaggccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 53413016 - 53412943
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  53413016 gaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtggctttc 53412943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37788469 - 37788541
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| |||||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  37788469 cgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30311378 - 30311305
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||| ||||||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  30311378 cgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggttt 30311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 46518698 - 46518625
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttct 76  Q
    ||||||| |||| |||||| ||||||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  46518698 aacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggtttct 46518625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8170744 - 8170672
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| ||| || |||||||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  8170744 cgaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccactaggccaacccaaatgggtt 8170672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14186719 - 14186648
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| |||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  14186719 cgaacctgagaccttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 31520611 - 31520682
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| ||||||||||||| ||||||||||||| | |||||||||| |||| ||||||||||||||||||||    
T  31520611 aacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggttt 31520682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 31788984 - 31789046
Alignment:
Q  11 acctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  31788984 acctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2667934 - 2667869
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    ||||||||||||||||||||  ||||||||||||| | ||||||||||||||| ||||||||||||    
T  2667934 cgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10499113 - 10499186
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||| ||||  |||| |||||||| | ||||||||||||||| ||||||||||||||||||||    
T  10499113 cgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggttt 10499186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36720453 - 36720380
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||| ||||||||||| ||||||||||||  | ||||||||||||||| || |||||||||||||||||    
T  36720453 cgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggttt 36720380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4222213 - 4222141
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| |||| | |||||| ||||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  4222213 cgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15048065 - 15048141
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttcta 77  Q
    |||||||||||||| |||||| |||||| |||||| | ||||||| |||||| || |||||||||||||||||||||    
T  15048065 cgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggtttcta 15048141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 3055065 - 3054994
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||| || |||||||||||| |||| |||| ||||||||| ||||| |||||||||||||||||||    
T  3055065 gaacctgagatcttgaggagaagcacgctccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 3054994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 8368805 - 8368876
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||||||  |||||||| ||||||| |||| |||||||||||||||||| ||| |||||||    
T  8368805 aacctgagacctcgaggatgagcacactaccaggtttcaagtcaataccactaggccaactcaattgggttt 8368876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 47454621 - 47454692
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggt 72  Q
    ||||||||||||||||||||| |||||||||| || |  |||||||||||||||||  ||||||||||||||    
T  47454621 cgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32651442 - 32651503
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaac 62  Q
    |||| |||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  32651442 cgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccactaggccaac 32651503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21960623 - 21960551
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| |||||||||||||||| ||||||||| ||||| ||||||||||||||| ||  |||||||| ||||||    
T  21960623 cgaatctgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaattgggtt 21960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 51903882 - 51903954
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||| ||||||| ||||||||||||| | ||||||||||||||  ||| ||||||| |||||||    
T  51903882 cgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacaggtcaacccaggtgggtt 51903954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 7975488 - 7975417
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||||| |||||| ||||||||||||| | ||||||| ||||||||||||||||| || |||||||    
T  7975488 aacctaagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggttt 7975417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19154703 - 19154629
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||||||||||||  ||||| ||||||||| ||||   ||||||||||| ||||||||||||||| ||||||||    
T  19154703 cgaacctgagacctttaggaggagcacactctcaggcctcaagccaatacaactaggccaacccaaatgggtttc 19154629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42799752 - 42799821
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    |||||||||||||| ||| || |||||||||| |||| ||||||||| ||||| |||||||||||||||||    
T  42799752 cgaacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtggg 42799821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 49494152 - 49494218
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    ||||||||||||||||||  ||||||||||||  || |||| |||||||||||||| ||||||||||    
T  49494152 aacctgagacctcgaggaagagcacactcccaaatttcaagtcaataccactaggctaacccaagtg 49494218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 4844519 - 4844580
Alignment:
Q  5 cctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    ||||||||||||||||| ||||||||||||| | ||||| ||||||||| || |||||||||    
T  4844519 cctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 4870215 - 4870276
Alignment:
Q  5 cctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    ||||||||||||||||| ||||||||||||| | ||||| ||||||||| || |||||||||    
T  4870215 cctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8075131 - 8075196
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    ||||||||| |||| |||||| |||||||||||| || ||||||| ||||||||||| ||||||||    
T  8075131 cgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaa 8075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30510203 - 30510272
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||||||||||||||| || |||| ||||| |||| |||||||| |||||| ||| ||||||||||||    
T  30510203 cgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccaccaggacaacccaagtgg 30510272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32639017 - 32638944
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||||| ||  | ||||||||||| ||||||||||||||||| ||  |||||||| |||||||    
T  32639017 cgaacctgagacctcgaagatgaacacactcccagtttccaagccaataccaccagaacaacccaaatgggttt 32638944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 203146 - 203090
Alignment:
Q  17 aggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| |||||||||||| | | ||||| |||||||||||||||||||||||||||||    
T  203146 aggaaaagcacactccctgatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2597224 - 2597296
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||| ||||| |||||||||| |  | | ||||||||||||| || ||||||||||||||||    
T  2597224 cgaacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14339682 - 14339610
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| | |||||| ||||||||||||  | ||||||||||||||| ||||||| |||| ||||||    
T  14339682 cgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggccaatccaactgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 26989031 - 26988995
Alignment:
Q  38 tccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||||||||||||||||||||||||||    
T  26989031 tccaagccaataccactaggccaacccaagtgggttt 26988995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27923047 - 27923119
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||   |||||| |||||||| ||| || ||||||||||||||| ||||||||| |||||||||    
T  27923047 cgaacctgagactatgaggaggagcacacttccatgtcccaagccaataccaccaggccaacctaagtgggtt 27923119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28703408 - 28703480
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| || ||| ||||||||||||| | |||||| |||| |||| | ||||||||||||||||    
T  28703408 cgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35111252 - 35111180
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||||||||  |||||||||||||||  |||  |||| |||||||||||| |||||||||||    
T  35111252 cgaacatgagacctcgaggatgagcacactcccaggtctcaaatcaatgccactaggccaatccaagtgggtt 35111180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 9832543 - 9832496
Alignment:
Q  27 cactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||    
T  9832543 cactcccaggtcccaagccaataccaccgggccaacccaagtgggttt 9832496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 34062553 - 34062627
Alignment:
Q  2 gaacctgagacctcgaggagaag--cacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||| |||||| ||  ||||||||||  || |||||||||| |||| |||||||||||||||||||    
T  34062553 gaacctgagaccttgaggaggagagcacactcccaaatttcaagccaatatcactgggccaacccaagtgggttt 34062627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 11092195 - 11092245
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||| | |||| ||||||||| |||||||||||||||||||||||||    
T  11092195 agcacactacaaggtcccaagccaacaccactaggccaacccaagtgggtt 11092245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 27259231 - 27259185
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaata 49  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  27259231 aacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 28928898 - 28928952
Alignment:
Q  16 gaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||| ||||||||| ||| | ||||||||||||||||||||||| ||||||||    
T  28928898 gaggaggagcacactctcagatcccaagccaataccactaggccaatccaagtgg 28928952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9557392 - 9557319
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||| ||||||||| ||||||||| ||| | |||||||||||| |  |||||| | |||||||||||    
T  9557392 cgaacctgagatctcgaggaggagcacactctcagatcccaagccaatactatcaggccagctcaagtgggttt 9557319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 10682949 - 10683017
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    ||||||||||| | ||| ||||||||||||| ||||  |||||||||||||||||  |||||||||||||    
T  10682949 gaacctgagactttgag-agaagcacactccaaggtctcaagccaataccactagatcaacccaagtggg 10683017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44743859 - 44743904
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagcca 46  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||    
T  44743859 cgaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45308906 - 45308979
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||||||||| |||| |||| || || |||| |||||||||| ||  ||||||||||| ||||    
T  45308906 cgaacctgagacctcgaggaggagcatactcacaagtcccaaaccaataccaccagaacaacccaagtgagttt 45308979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 5499412 - 5499484
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||| ||||||  ||||| ||||||||| ||| |  |||| ||||||||| ||||||||||||||||||||    
T  5499412 gaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggttt 5499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11612371 - 11612307
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaaccca 65  Q
    ||||||||||||||  ||||| ||||||||||||| | |||||  |||||||| |||||||||||    
T  11612371 cgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12761584 - 12761520
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaaccca 65  Q
    ||||||||||| ||| ||||| | ||||||||||||| ||||| ||||||||| || ||||||||    
T  12761584 cgaacctgagagctcaaggaggaacacactcccaggtcccaagtcaataccaccagaccaaccca 12761520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 17554842 - 17554778
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    ||||||||| ||| |||||  ||||||||||||||| ||||||||||||||| |  |||||||||    
T  17554842 gaacctgagcccttgaggaagagcacactcccaggtcccaagccaataccaccaaaccaacccaa 17554778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 24481648 - 24481580
Alignment:
Q  6 ctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||| ||||| | |||||||||| || || |||| ||||||||||||| ||||| |||||||||||    
T  24481648 ctgagacgtcgagaaaaagcacactctcaagtcccaaaccaataccactagaccaactcaagtgggttt 24481580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29563972 - 29563920
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccac 53  Q
    |||||||||||| ||||||||||||||||| |||| |  ||||||||||||||    
T  29563972 cgaacctgagacttcgaggagaagcacacttccagatctcaagccaataccac 29563920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 16991589 - 16991542
Alignment:
Q  26 acactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||| | ||||||||||||||| |||||||||||| ||||||    
T  16991589 acactcccagatcccaagccaataccaccaggccaacccaaatgggtt 16991542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 26871510 - 26871581
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||| | |||||| || | ||||| |||| ||||||||| ||||| ||||||||||||||||||||    
T  26871510 aacctcagactttgaggaggagaaaactccaaggtcccaagccaacaccaccaggccaacccaagtgggttt 26871581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 24460024 - 24459990
Alignment:
Q  39 ccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||| |||||||||||||||||||    
T  24460024 ccaagccaataccaccaggccaacccaagtgggtt 24459990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 47810750 - 47810820
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| ||||||| | |||| |||||||||||| |  | ||||||||||||| || ||||||||||||||||    
T  47810750 aacccgagaccttgcggaggagcacactcccaagaccaaagccaataccaccagaccaacccaagtgggtt 47810820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 70
Target Start/End: Original strand, 10969938 - 10969967
Alignment:
Q  41 aagccaataccactaggccaacccaagtgg 70  Q
    ||||||||||||||||||||||||||||||    
T  10969938 aagccaataccactaggccaacccaagtgg 10969967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 26481984 - 26481927
Alignment:
Q  16 gaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||| ||||||||| ||||| |||||||| |||||| | || ||||||||||||||    
T  26481984 gaggaggagcacactctcaggtcccaagccattaccaccaagctaacccaagtgggtt 26481927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34844442 - 34844370
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| ||| || |||||||||| ||||  |||||||| | ||| ||| ||||||||||||||||    
T  34844442 cgaacctgagaccttgag-aggagcacactccaaggtctcaagccaacaacaccagggcaacccaagtgggttt 34844370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40268560 - 40268488
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||  || || ||| |||||| |||| ||||||||| ||||| |||| |||||||||||||||    
T  40268560 cgaacctgagaccttaag-aggagcccactccaaggtcccaagccaacaccaccaggcaaacccaagtgggttt 40268488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43902366 - 43902415
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaatac 50  Q
    |||| |||||||||||||||||||| |||||| ||||  |||||||||||    
T  43902366 cgaatctgagacctcgaggagaagcgcactcctaggtcacaagccaatac 43902415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 49397545 - 49397578
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactccca 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  49397545 cgaacatgagacctcgaggagaagcacactccca 49397578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 54990774 - 54990702
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||| ||||| |||| |||| ||||||||| | |||||   ||||||||||||||||    
T  54990774 cgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaacaacacta-aacaacccaagtgggttt 54990702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 73
Target Start/End: Original strand, 8796140 - 8796168
Alignment:
Q  45 caataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||||||||||||||||||    
T  8796140 caataccactaggccaacccaagtgggtt 8796168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10828737 - 10828809
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||  || || |||| |||||||||| | ||| ||||| ||||||| || ||||||||||||    
T  10828737 cgaacctgagaccttaagtaggagcatactcccaggtcctaagacaatatcactaggtcagcccaagtgggtt 10828809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 13808890 - 13808958
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    ||||||||||||| |||||| |||||||| |||| | ||||| |||||  || || |||||||||||||    
T  13808890 gaacctgagacctagaggaggagcacactgccagatcccaagtcaataagaccagaccaacccaagtgg 13808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 18319181 - 18319245
Alignment:
Q  10 gacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| || ||| ||||||||||||||| |||| |||||||||| | ||||||| |||| |||||    
T  18319181 gaccttgaagaggagcacactcccaggtcccaaaccaataccaccaagccaacctaagtaggttt 18319245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 30232401 - 30232329
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||  |||||| |||||| | |||| |  ||| |||||||||| ||| ||||||||||||||||    
T  30232401 gaacctgagaccatgaggaggagcacagttccagatcgcaaaccaataccaccagggcaacccaagtgggttt 30232329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37504380 - 37504440
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaa 61  Q
    ||||||| ||||||  ||||||  || ||||||| ||| ||||||||||||||||||||||    
T  37504380 cgaacctcagaccttaaggagagacatactcccaagtttcaagccaataccactaggccaa 37504440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 40063691 - 40063619
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||  ||||| |||| |||| ||| | |||||||||||| |||| | |||||||||||||||    
T  40063691 cgaacttgagaccttaaggaggagcatactctcagatcccaagccaatactactaagtcaacccaagtgggtt 40063619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47236975 - 47237035
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaa 61  Q
    ||||| |||||||| || ||| ||||||||||| ||| |||| |||||||||| |||||||    
T  47236975 cgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaataccaccaggccaa 47237035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 53956456 - 53956384
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||| || ||  |||||||||| ||| |||||||||| |||  ||| |||||||||||||||    
T  53956456 cgaacatgagacctcaagaaggggcacactcccgggtcccaagccaatgccatcaggacaacccaagtgggtt 53956384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33549176 - 33549103
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  33549176 cgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggttt 33549103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12188307 - 12188380
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| ||| |||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12188307 cgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 31622997 - 31623068
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||  | |||||||||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggttt 31623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10338178 - 10338251
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||| |||||| |||||||||| |||| ||||||||||||||| | ||||||||||||| ||||    
T  10338178 cgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtgagttt 10338251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12234511 - 12234584
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||||||||||||  | ||||||||||||||| ||||| ||||||||| ||||||||| ||||||||||    
T  12234511 cgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggttt 12234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30127472 - 30127400
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||| ||| |||||||||||||   ||||||||||||||| || ||||||||||||||||    
T  30127472 cgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14558034 - 14557962
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||  |||||| |||||||| |||||| ||||||||| ||||| || ||||||||||||||||    
T  14558034 cgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccaccagaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21418542 - 21418470
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| |||||| | |||||| |||||||||||| || ||||||||||||||| |||||||||||| ||||||    
T  21418542 cgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 6776617 - 6776679
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    |||||| |||||||| ||||||| ||||| | ||||||||||||||| |||||||||||||||    
T  6776617 tgagacatcgaggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 13661590 - 13661521
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||| |||||||||||| ||  |||||||||| |||||| |||||||| |||||||    
T  13661590 aacctgagacctcgaggaggagcacactcccaagtgtcaagccaata-cactagaccaacccatgtgggtt 13661521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 19638010 - 19638080
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||| |||  | ||||||||||||||||||| |||||||||||| | ||||| ||||||||||    
T  19638010 aacctgagaccttgagctggagcacactcccaggttccacgccaataccactggaccaacgcaagtgggtt 19638080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13330159 - 13330086
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| ||||||||| |||||| |||  ||||||| |||| ||| ||||||||||||| ||||||||||||||||    
T  13330159 cgaatctgagaccttgaggaggagcttactcccaagttcaaagtcaataccactaggtcaacccaagtgggttt 13330086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11423638 - 11423566
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||||||||||||||| |||||||  | ||||| ||||||||| || ||| |||||| |||||    
T  11423638 cgaacctgagacctcgaggagaagcatactcccaaatcccaagtcaataccaccagaccagcccaagcgggtt 11423566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16405157 - 16405109
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaata 49  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  16405157 cgaaactgagacctcgaggagaagcacactcccaggtcccaaaccaata 16405109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24641194 - 24641266
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| | ||||||||||| ||||||||||||| | ||||| ||||||||| | |||||||||| ||||||    
T  24641194 cgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 22697 - 22748
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||| |||| ||||||||| |||||||| |||||||||||||||||    
T  22697 agcacactccaaggtcccaagccaaaaccactagcccaacccaagtgggttt 22748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 3779406 - 3779339
Alignment:
Q  6 ctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||| ||| || |||||||||||| ||  |||||||||||||||||| ||||| |||||||||    
T  3779406 ctgagaccttgagaaggagcacactcccaagtctcaagccaataccactaggtcaacctaagtgggtt 3779339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 34293835 - 34293889
Alignment:
Q  16 gaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgg 70  Q
    |||||| ||||||||||||  |||||| |||||||||||||| ||||||||||||    
T  34293835 gaggaggagcacactcccaaattccaaaccaataccactaggtcaacccaagtgg 34293889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34444875 - 34444809
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaag 67  Q
    |||||||||||||| | |||| |||||||||  |||| ||||| ||||||||| |||||||||||||    
T  34444875 cgaacctgagaccttggggaggagcacactctaaggtcccaagtcaataccaccaggccaacccaag 34444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 6758432 - 6758497
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggt 72  Q
    ||||||||||||| | ||||||||||||  | | ||||||||||||| |||||||| |||||||||    
T  6758432 tgagacctcgaggtggagcacactcccaaatcctaagccaataccaccaggccaacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 24507548 - 24507605
Alignment:
Q  9 agacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    |||||| |||||| |||| ||||| |||| ||||||||| ||||||||||||||||||    
T  24507548 agaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 24507605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27989661 - 27989734
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||| ||||  || || |||| ||||||| ||||||||| |||||||||||||||| ||||||| ||||    
T  27989661 cgaacctgaaaccttaagaaggagcatactcccaagttccaagctaataccactaggccaatccaagtgagttt 27989734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 346602 - 346551
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccac 53  Q
    ||||| |||||||||||||||||||||||| |||||| ||||| |||||||||    
T  346602 cgaacatgagacctcgaggagaagcacact-ccaggtcccaagtcaataccac 346551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3715524 - 3715452
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||||| |||||||| |||||||| |  |||| |||||||||||| |||||| || ||||||    
T  3715524 cgaacttgagacctcgacgagaagcatactcccagatctcaagtcaataccactagcccaaccaaaatgggtt 3715452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13227162 - 13227234
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| |||||| |||||||| ||||||||||||| |  ||  ||||||||||  ||||||||||||||||||    
T  13227162 cgaacttgagacttcgaggaggagcacactcccagatctcataccaataccacatggccaacccaagtgggtt 13227234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 13441100 - 13441048
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 75  Q
    ||||||||||||||| |||||||||||||||  | ||||||||||||| ||||    
T  13441100 agcacactcccaggtcccaagccaataccacccgaccaacccaagtggatttc 13441048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20213113 - 20213057
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactagg 57  Q
    |||||||||||| | |||||| ||||||||||||||| ||||||  |||||||||||    
T  20213113 cgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccactagg 20213057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22107136 - 22107080
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactagg 57  Q
    |||||||||||| | |||||| ||||||||||||||| ||||||  |||||||||||    
T  22107136 cgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccactagg 22107080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12216816 - 12216753
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaaccc 64  Q
    |||||||||||||||||| || |||||| || ||||| |||| |||||||||| || |||||||    
T  12216816 cgaacctgagacctcgagaaggagcacattcgcaggtcccaaaccaataccaccagaccaaccc 12216753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 15497063 - 15497114
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||||||| || ||||||| |||||| || |||||||||||||||||||||    
T  15497063 agcacactctcaagttccaaaccaatatcattaggccaacccaagtgggttt 15497114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 1056711 - 1056761
Alignment:
Q  23 agcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||| ||||||| || ||| ||||||||||||||| |||||||||||||||    
T  1056711 agcatactcccaagtcccaggccaataccactaggtcaacccaagtgggtt 1056761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 14278117 - 14278186
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||  ||||| ||| ||||||||||| | ||||||||| ||| ||||||||||| |||||||    
T  14278117 aacctgagaccttaaggaggagcgcactcccaggtccaaagccaata-caccaggccaacccatgtgggtt 14278186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23910115 - 23910157
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaag 43  Q
    |||||||||||||| |||||| ||||||||||||||| |||||    
T  23910115 cgaacctgagaccttgaggaggagcacactcccaggtcccaag 23910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 31847095 - 31847157
Alignment:
Q  7 tgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    |||||||| |||||| | |||||||  ||||||||||||||||| || ||| |||||||||||    
T  31847095 tgagaccttgaggagtaacacactctaaggttccaagccaatacaaccaggtcaacccaagtg 31847157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32613144 - 32613214
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtggg 71  Q
    ||||| ||||| || ||| || |||||||||||||   ||||| ||||||||| |||||||||||||||||    
T  32613144 cgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14199951 - 14200024
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| ||||||||| |||||| |||||||||||| ||  |||||| ||||| ||||  |||||||| |||||||    
T  14199951 cgaatctgagaccttgaggaggagcacactcccaagtctcaagcctatacctctagagcaacccaaatgggttt 14200024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28364009 - 28363948
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaac 62  Q
    |||| ||||||||| |||||| ||||||||| ||| | |||| |||||||||||| ||||||    
T  28364009 cgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaataccactatgccaac 28363948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2616548 - 2616476
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| |||||||| || ||| |||||||| ||| |   ||||| ||||||||||||||||||||| ||||||    
T  2616548 cgaacttgagaccttgaagaggagcacacttccatgactcaagctaataccactaggccaacccaaatgggtt 2616476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6385934 - 6385882
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccac 53  Q
    ||||||||||||||  ||||| |||||| |||||||| ||||| |||||||||    
T  6385934 cgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaataccac 6385882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 32439877 - 32439829
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaata 49  Q
    ||||| ||||||||||| ||||||||||||  ||||||||||| |||||    
T  32439877 cgaacttgagacctcgaagagaagcacactttcaggttccaagtcaata 32439829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15327 - 15399
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||||||||||||    
T  15327 cgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19966 - 20027
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaac 62  Q
    |||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||    
T  19966 cgaacctgagaccttgaggaggagcatactcccaggttccaagccaataccactaggccaac 20027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 41638 - 41709
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||||||||| |||| |||| ||| |  ||||||||||||||||||||||||||||||||||    
T  41638 gaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11600 - 11534
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaag 67  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||||||| |||||| ||||||    
T  11600 cgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6923 - 6988
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    |||||||||||| | |||||| |||||||||||  || ||||||||||||||||||||||||||||    
T  6923 cgaacctgagactttgaggaggagcacactccccagtcccaagccaataccactaggccaacccaa 6988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42524 - 42596
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||||||   |||||| |||| |||||||| ||||||| |||||||||||||||||||||| ||||||    
T  42524 cgaacctgagactctgaggaggagcatactcccagattccaagtcaataccactaggccaacccaactgggtt 42596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 112354 - 112282
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||| ||||||| | ||| | ||||||||||| |||||||||||||| || |||||||||||||||||||    
T  112354 cgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggccaacccaagtgggtt 112282  T

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Target: scaffold0013 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 91196 - 91124
Alignment:
Q  2 gaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||||||||||||  |||||||||||||| |||| ||| || || ||||||||||| ||||||||||||||||    
T  91196 gaacctgagaccttaaggagaagcacacttccagattcgaaacctataccactaggtcaacccaagtgggttt 91124  T

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Target: scaffold1367 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 844 - 910
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaag 67  Q
    |||||||||||| |||||||| |||||| |||||| | ||||||||||||||| |||||| ||||||    
T  844 cgaacctgagacttcgaggaggagcacattcccagatcccaagccaataccaccaggccaccccaag 910  T

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Target: scaffold0211 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24125 - 24053
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||||||| || |||| ||| |||||||||| | || ||||| |||||||| ||||||||||||||||||||    
T  24125 cgaacctgacacttcgaagaggagcacactcctaagtcccaagtcaataccattaggccaacccaagtgggtt 24053  T

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Target: scaffold0194 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13050 - 13118
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtg 69  Q
    |||||||||||||| |||||| ||||||||||||| |  |||||||||||||| | ||||||| |||||    
T  13050 cgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

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Target: scaffold0417 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 10283 - 10218
Alignment:
Q  9 agacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    |||| ||||||||| || ||||||||| | ||||||||||| ||  ||||||||||||||||||||    
T  10283 agacttcgaggagaggcgcactcccagatcccaagccaatatcatcaggccaacccaagtgggttt 10218  T

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Target: scaffold0337 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 1817 - 1760
Alignment:
Q  9 agacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    |||||| |||||| |||| ||||| |||| ||||||||| ||||||||||||||||||    
T  1817 agaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 1760  T

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Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 12253 - 12196
Alignment:
Q  9 agacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    |||||| |||||| |||| ||||| |||| ||||||||| ||||||||||||||||||    
T  12253 agaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaacccaa 12196  T

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Target: scaffold0291 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2474 - 2546
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||||||| |||||| ||||||||||||| | | || ||||||||||  | ||||||||| ||||||    
T  2474 cgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaaatgggtt 2546  T

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Target: scaffold0063 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 35401 - 35465
Alignment:
Q  9 agacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||| |||||| |||| ||||| || |||||||||||||||||| ||| |||| |||||||||    
T  35401 agaccttgaggaggagcatactcctagattccaagccaataccactgggcaaaccgaagtgggtt 35465  T

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Target: scaffold0126 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25351 - 25406
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactag 56  Q
    |||||||||||||| ||| || |||||||||||| ||  |||||||||||||||||    
T  25351 cgaacctgagaccttgagaaggagcacactcccaagtctcaagccaataccactag 25406  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 5249 - 5192
Alignment:
Q  17 aggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 74  Q
    ||||| |||||||||||| || ||||||||||  ||||||| |||| |||||||||||    
T  5249 aggaggagcacactcccaagtcccaagccaattacactaggacaactcaagtgggttt 5192  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 32814 - 32847
Alignment:
Q  42 agccaataccactaggccaacccaagtgggtttc 75  Q
    |||||||||||| |||||||||||||||||||||    
T  32814 agccaataccaccaggccaacccaagtgggtttc 32847  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 61679 - 61724
Alignment:
Q  28 actcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||||    
T  61679 actcccaggtcccaagccaataccactagatcaacccatgtgggtt 61724  T

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Target: scaffold0517 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7730 - 7802
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||  ||||| ||||||||  |||||  |||||||||||||| || ||||||||||| ||||    
T  7730 cgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 7802  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 157000 - 157056
Alignment:
Q  10 gacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaa 66  Q
    |||||||||||| ||||||||||||| |  |||||||||||||  ||| ||||||||    
T  157000 gacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaa 157056  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19851 - 19923
Alignment:
Q  1 cgaacctgagacctcgaggagaagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 73  Q
    ||||| ||||||||| ||||| |||| |||||||| | ||||||||||||||  | |||||  ||||||||||    
T  19851 cgaacttgagacctcaaggaggagcagactcccagatcccaagccaataccatcatgccaattcaagtgggtt 19923  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 18369 - 18317
Alignment:
Q  3 aacctgagacctcgaggagaagcacactcccaggttccaagccaataccacta 55  Q
    ||||||| |||| |||||| |||||| |||||| |||||||||||| ||||||    
T  18369 aacctgaaaccttgaggaggagcacaatcccagattccaagccaatgccacta 18317  T

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