View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11815_high_7 (Length: 313)
Name: NF11815_high_7
Description: NF11815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11815_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 21467214 - 21467499
Alignment:
| Q |
1 |
taaaatctaagatgatatcagaagatttcgtaacctattctaggtatgcttgcaagtcttatcgacacatctaacagtatcaacgagttgttactattac |
100 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||| ||||| |
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| T |
21467214 |
taaaatctaagatgatatcagaagatt-cgtaacctattctagatatggttgcaagtcttatcgacacatctaacactatcaacgagttattaatattat |
21467312 |
T |
|
| Q |
101 |
gccactcaatgaggaatgaaatatattactcaaaggctatgacattttattgtttactacatagtgactattacaatgatgatagtggattacatttgaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21467313 |
gccactcaatgaggaatgaaatatattactcaaaggctatggcattttattgtttactacatagtgactattacaatgatgatagtggattacatttgaa |
21467412 |
T |
|
| Q |
201 |
tcgtgtaaaagttttctttgatgccatattgtttccattagatgaaattatatcgattattcaagttactgctagttccacacagtc |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |
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| T |
21467413 |
tcgtgtaaaagttttctttgatgccatattgtttccattagatgaaattatattgattattcaagttgctgctagttccacacagtc |
21467499 |
T |
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