View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11817_low_18 (Length: 317)
Name: NF11817_low_18
Description: NF11817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11817_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 19 - 307
Target Start/End: Original strand, 41705549 - 41705837
Alignment:
| Q |
19 |
ataaaaatataaagatctatgggaccaattgatactagatgtatatgttcctataaatggcttttataaatatactctcttttgtaagatgcaaagagaa |
118 |
Q |
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| T |
41705549 |
ataaaaatataaagatctatgggaccaattgatactagatgtatatgttcctataaatggcttttataaatatacgctcttttgtaagatgcaaagagaa |
41705648 |
T |
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| Q |
119 |
acgactttggaacttgctaaactttgcagagtttttcttcctttcatttaagtcaagtagcacatatatataaagagcatatcatagtggataaattact |
218 |
Q |
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| T |
41705649 |
acgactttggaacttgctaaactttgcagagtttttcttcctttcatttaagtcaagtagcacatatatataaagagcatatcatagtggataaattact |
41705748 |
T |
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| Q |
219 |
tattaaaatatacaaaatgcttgaaaactaaaccattgtaattgttgcactatcggtaattgaagagccaatcccaacgttcgcctatg |
307 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
41705749 |
tattaaaatatacaaaatgcttgaaaactagaccattgtaattgttgcactatcggtaattgaatagccaatcccaacgttcgcctatg |
41705837 |
T |
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