View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11819_low_18 (Length: 381)

Name: NF11819_low_18
Description: NF11819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11819_low_18
NF11819_low_18
[»] chr4 (22 HSPs)
chr4 (3-364)||(15740362-15740722)
chr4 (1-371)||(19755406-19755776)
chr4 (1-371)||(19784030-19784400)
chr4 (3-371)||(1828171-1828539)
chr4 (1-371)||(23642222-23642592)
chr4 (1-371)||(47418943-47419313)
chr4 (1-212)||(47685685-47685896)
chr4 (48-364)||(48312281-48312596)
chr4 (48-371)||(54482790-54483113)
chr4 (46-371)||(2821665-2821993)
chr4 (1-122)||(7404052-7404177)
chr4 (1-62)||(13270831-13270892)
chr4 (312-371)||(23647880-23647939)
chr4 (228-371)||(5789723-5789866)
chr4 (169-371)||(55725337-55725539)
chr4 (98-145)||(20395832-20395879)
chr4 (76-118)||(11587082-11587124)
chr4 (105-145)||(4640536-4640576)
chr4 (99-143)||(29553599-29553643)
chr4 (98-174)||(42778474-42778550)
chr4 (98-174)||(53486781-53486857)
chr4 (46-122)||(55725566-55725642)
[»] chr3 (25 HSPs)
chr3 (1-371)||(34332446-34332816)
chr3 (1-371)||(2364416-2364786)
chr3 (1-371)||(10323202-10323572)
chr3 (7-371)||(19919860-19920224)
chr3 (1-198)||(7312915-7313112)
chr3 (1-296)||(40930245-40930529)
chr3 (1-162)||(7032445-7032606)
chr3 (46-371)||(48569670-48569995)
chr3 (1-205)||(962960-963164)
chr3 (107-170)||(31547616-31547679)
chr3 (48-134)||(19890864-19890950)
chr3 (274-371)||(12341886-12341983)
chr3 (152-364)||(15312871-15313084)
chr3 (274-371)||(17097508-17097605)
chr3 (105-170)||(44888147-44888212)
chr3 (98-174)||(26846103-26846179)
chr3 (98-174)||(47537504-47537580)
chr3 (76-135)||(3141066-3141125)
chr3 (99-142)||(26010284-26010327)
chr3 (105-134)||(31675173-31675202)
chr3 (105-134)||(31921218-31921247)
chr3 (105-145)||(9509997-9510037)
chr3 (105-145)||(9517972-9518012)
chr3 (307-371)||(16179392-16179456)
chr3 (241-333)||(19891056-19891148)
[»] chr7 (16 HSPs)
chr7 (1-371)||(11276879-11277253)
chr7 (1-371)||(4937759-4938129)
chr7 (1-371)||(47877122-47877492)
chr7 (1-371)||(29968114-29968483)
chr7 (7-371)||(235069-235432)
chr7 (1-371)||(17720774-17721144)
chr7 (1-248)||(37919683-37919930)
chr7 (46-333)||(37254942-37255229)
chr7 (72-371)||(31422814-31423111)
chr7 (105-170)||(17055772-17055837)
chr7 (61-134)||(25619664-25619737)
chr7 (98-174)||(34231935-34232011)
chr7 (99-134)||(45943088-45943123)
chr7 (76-134)||(36363738-36363796)
chr7 (105-170)||(22819549-22819614)
chr7 (98-174)||(4077511-4077587)
[»] chr5 (18 HSPs)
chr5 (1-371)||(30731945-30732315)
chr5 (1-371)||(23238523-23238892)
chr5 (1-371)||(12825338-12825708)
chr5 (1-371)||(42513859-42514229)
chr5 (1-371)||(35983422-35983792)
chr5 (1-371)||(27116804-27117162)
chr5 (1-371)||(28535306-28535676)
chr5 (1-371)||(31641650-31642020)
chr5 (1-371)||(42928270-42928640)
chr5 (48-359)||(27795669-27795980)
chr5 (236-371)||(8299813-8299948)
chr5 (1-331)||(33169797-33170127)
chr5 (274-371)||(25857055-25857152)
chr5 (274-371)||(10777196-10777293)
chr5 (3-143)||(24408069-24408209)
chr5 (98-174)||(7000593-7000669)
chr5 (98-174)||(20208547-20208623)
chr5 (105-134)||(476456-476485)
[»] chr1 (15 HSPs)
chr1 (1-371)||(11908736-11909106)
chr1 (1-371)||(6050742-6051112)
chr1 (1-371)||(35541188-35541558)
chr1 (1-80)||(51052619-51052698)
chr1 (73-198)||(47622881-47623006)
chr1 (79-206)||(2491429-2491556)
chr1 (105-170)||(22191613-22191678)
chr1 (262-333)||(47622746-47622817)
chr1 (105-170)||(21405081-21405146)
chr1 (274-371)||(43388777-43388874)
chr1 (105-155)||(3073993-3074043)
chr1 (123-185)||(43944291-43944353)
chr1 (99-145)||(48265575-48265621)
chr1 (101-174)||(30110753-30110826)
chr1 (98-174)||(17708215-17708291)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-371)||(3391-3761)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-371)||(105474-105844)
[»] chr8 (22 HSPs)
chr8 (1-323)||(13396527-13396849)
chr8 (1-371)||(41664999-41665370)
chr8 (1-371)||(8299942-8300312)
chr8 (1-371)||(7924525-7924895)
chr8 (6-371)||(32266706-32267071)
chr8 (1-371)||(9922740-9923110)
chr8 (1-217)||(172242-172458)
chr8 (48-371)||(13879118-13879441)
chr8 (46-371)||(25090571-25090896)
chr8 (274-371)||(20824711-20824808)
chr8 (274-371)||(17699892-17699989)
chr8 (325-371)||(172670-172716)
chr8 (99-144)||(12134565-12134610)
chr8 (105-173)||(28993058-28993126)
chr8 (287-371)||(43270877-43270961)
chr8 (274-333)||(42177218-42177277)
chr8 (93-134)||(13200296-13200337)
chr8 (71-120)||(42177471-42177520)
chr8 (62-134)||(2170542-2170614)
chr8 (98-174)||(17659067-17659143)
chr8 (98-174)||(23680398-23680474)
chr8 (98-134)||(37039877-37039913)
[»] chr6 (28 HSPs)
chr6 (1-278)||(2553776-2554053)
chr6 (3-238)||(21168340-21168574)
chr6 (1-371)||(24767060-24767425)
chr6 (301-371)||(2554045-2554115)
chr6 (25-333)||(15958482-15958790)
chr6 (46-371)||(20882664-20882989)
chr6 (73-206)||(14372787-14372920)
chr6 (274-371)||(17573287-17573384)
chr6 (274-371)||(17605965-17606062)
chr6 (274-371)||(10576881-10576978)
chr6 (1-62)||(18651174-18651235)
chr6 (105-145)||(26513967-26514007)
chr6 (105-325)||(33185678-33185898)
chr6 (76-135)||(13937914-13937973)
chr6 (274-371)||(21629738-21629835)
chr6 (98-174)||(649894-649970)
chr6 (98-174)||(18051277-18051353)
chr6 (72-119)||(11462617-11462664)
chr6 (99-134)||(25318091-25318126)
chr6 (99-134)||(26205585-26205620)
chr6 (274-360)||(14372633-14372719)
chr6 (81-135)||(18682401-18682455)
chr6 (61-134)||(10577117-10577190)
chr6 (262-371)||(13938119-13938228)
chr6 (61-134)||(21629975-21630048)
chr6 (105-170)||(29055763-29055828)
chr6 (98-174)||(9199080-9199156)
chr6 (98-174)||(17079019-17079095)
[»] chr2 (11 HSPs)
chr2 (1-216)||(41207155-41207370)
chr2 (73-333)||(40176879-40177139)
chr2 (75-371)||(12645749-12646045)
chr2 (73-359)||(28252931-28253217)
chr2 (1-52)||(4552308-4552359)
chr2 (152-208)||(17764752-17764808)
chr2 (75-203)||(38604178-38604306)
chr2 (99-134)||(22052864-22052899)
chr2 (99-145)||(36804149-36804195)
chr2 (105-145)||(18844490-18844530)
chr2 (98-134)||(44547716-44547752)
[»] scaffold0179 (2 HSPs)
scaffold0179 (98-174)||(7764-7840)
scaffold0179 (98-174)||(12698-12774)
[»] scaffold0007 (1 HSPs)
scaffold0007 (98-145)||(182365-182412)
[»] scaffold0555 (1 HSPs)
scaffold0555 (105-134)||(7911-7940)
[»] scaffold0043 (1 HSPs)
scaffold0043 (105-134)||(34477-34506)


Alignment Details
Target: chr4 (Bit Score: 306; Significance: 1e-172; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 3 - 364
Target Start/End: Original strand, 15740362 - 15740722
Alignment:
Q  3 catatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15740362 catatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagtaataaa 15740461  T
Q  103 gccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcc 202  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||| |||||||    
T  15740462 gccctacactcctctaccaactcctcctcccaagcccacaaccgcctatgccactgcaacgcctcccctcccacgtctacccccaacaagaatatattcc 15740561  T
Q  203 taactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtc 302  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  15740562 taacagagattgatttgtgaacattcaagtcaaaaagacgcccaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcagtatc 15740661  T
Q  303 tgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcaccta 364  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  15740662 tgcaccatctcccaccctcctcct-acacaagacccaaaccatccctctccaccctcaccta 15740722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 19755406 - 19755776
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  19755406 agcatgtcatagaccccacgtacagaatacccaccctcctgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactattagtaata 19755505  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    || ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19755506 aaaccctacactcctctaccaactcctcctcctaagcccacaaccgcctacgccaccgcaacgcctccccacccacatccacccccaacaagaacatatt 19755605  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19755606 cctaaatgaaattgatttgttaacattcaagtcaaaaaggcgcctaaaccggtcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 19755705  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  19755706 tctgcaccatctcccaccctcctcctaacacacatcccaaaccatccctctccaccctcacctatcccatc 19755776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 19784400 - 19784030
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  19784400 agcatgtcatagaccccacgtacagaatacccaccctcctgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactattagtaata 19784301  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    || ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19784300 aaaccctacactcctctaccaactcctcctcctaagcccacaaccgcctacgccaccgcaacgcctccccacccacatccacccccaacaagaacatatt 19784201  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19784200 cctaaatgaaattgatttgttaacattcaagtcaaaaaggcgcctaaaccggtcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 19784101  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  19784100 tctgcaccatctcccaccctcctcctaacacacatcccaaaccatccctctccaccctcacctatcccatc 19784030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 3 - 371
Target Start/End: Complemental strand, 1828539 - 1828171
Alignment:
Q  3 catatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaa 102  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| |||||    
T  1828539 catatcataggctccacgtacggaatacccaccatcatgattaggtaaccaaagccatttgtcagtcactgaatcctgcaaagaaactgttagtaataaa 1828440  T
Q  103 gccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcc 202  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  1828439 gccctccactcctctaccaactcctcctcccaagcccacaaccgcctatgccaccacaacgcctcccctcccacgtctacccccaacaagaacatattcc 1828340  T
Q  203 taactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtc 302  Q
    |||| ||||| |||||||||| | ||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||||||||| || |||||    
T  1828339 taacagagatagatttgtgaatactcaagtcaaaaagacgcccaaaccgggcacacaggggagcatctccgcaccaacgatcacgccaaaagtcagtgtc 1828240  T
Q  303 tgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  1828239 tgcaccatctcccaccctcctcctaacacaagacccaaaccatccctcaccaccctcacctatcccatc 1828171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 23642592 - 23642222
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||| | |    
T  23642592 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatctgtctaacactgagtcctgcaaagaaactgttagtaaca 23642493  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  23642492 aagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccacctcaacgcctccccgcccacatccacccccagcaggaacatatt 23642393  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || ||||||||||| ||||||| ||||||||||||||| ||     
T  23642392 cctaactgagattgatttgtgaacagtcaagtcaaaaaggcgcctaaaccggacacaaagaggaacatctccacaccaacaatcacgccaaaaatcagta 23642293  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  23642292 tctgccccatctcccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatc 23642222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 47418943 - 47419313
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||||||||||||||||||||| ||||||||| || | |||||||||||||| |||||||| |||  |||||| ||||||||||||| ||||||| | |    
T  47418943 agcatatcatagactccacgtactgaatacccatcagcttgattaggtaaccagagccatctatctaacactgaatcctgcaaagaaattgttagtaaca 47419042  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||||||||| || |||||||||    
T  47419043 aagccctacactcctctaccacctcctcctcccaagcccacaaccgcctacgccaccgcaacgcctccccgcccacatccacccccagcaggaacatatt 47419142  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||||||||| |||||||||  |||| |||||||||||  ||||||| |||| || ||||||||||| ||||||| ||||||||||||||| ||     
T  47419143 cctaactgagattgaattgtgaacagacaagccaaaaaggcgcggaaaccggacacaaagaggaacatctccacaccaacaatcacgccaaaaatcagta 47419242  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  47419243 tctgccccatctcccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatc 47419313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 47685896 - 47685685
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| || ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| | |    
T  47685896 agcatgtcgtagactccacgaacagaatacccatcatcatgattaggtaaccaaagccatctgtctatcaccgattcctgcaaagaaactgttagtaaca 47685797  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||| | |||||| ||| |||||||| ||||| |||||||||||||||||||||||    
T  47685796 aagccctacactcctctaccaactcctcctcccaagcccacagccgcccacgccacctcaatgcctccccgcccacatccacccccaacaagaacatatt 47685697  T
Q  201 cctaactgagat 212  Q
    ||||||||||||    
T  47685696 cctaactgagat 47685685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 48 - 364
Target Start/End: Original strand, 48312281 - 48312596
Alignment:
Q  48 taaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaaccgc 147  Q
    |||||| | ||||||||| || ||  ||||||||||| | ||||||||| ||||||||||||||||||||||||| |||||||| ||   | | |||||     
T  48312281 taaccacacccatctgtcagtaacgaattcctgcaaatagactgttagtaataaagccctacactcctctaccaagtcctcctcacacaccaataaccgg 48312380  T
Q  148 ctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaa 247  Q
    | | ||||| || ||||| |||||||  | |||||||||||||||||||| ||||| || | ||||||||| |  |     |||||| |||| |||||||    
T  48312381 cgacgccactgccacgcccccccaccatcctccacccccaacaagaacatgttcctcaccgtgattgatttattgatggctaagtcataaagtcgcctaa 48312480  T
Q  248 accgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatcc 347  Q
    | ||  ||||||  |||||||  || ||||||| ||| |||||||||||| | || || ||||| |||||||||||||||||||||  | ||||||| ||    
T  48312481 agcgctcacacaacggaacat-accacaccaacaatctcgccaaaaatcgatatcagctccatcccccaccctcctcctaacacaatccacaaaccaacc 48312579  T
Q  348 ctctccaccctcaccta 364  Q
    |||||||||||| ||||    
T  48312580 ctctccaccctcgccta 48312596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 48 - 371
Target Start/End: Complemental strand, 54483113 - 54482790
Alignment:
Q  48 taaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaaccgc 147  Q
    |||||| | |||||| || || || |||||||||||||| ||||||||| ||||| ||||||||||||||||||| |||||||||||   ||| |||||     
T  54483113 taaccacacccatctatcagtaacggattcctgcaaagagactgttagtaataaacccctacactcctctaccaaatcctcctcccacacccataaccgg 54483014  T
Q  148 ctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaa 247  Q
    | | ||||| || ||||  |||||||  | |||||||||||||||||||| ||||| || |  |||||||| |  |     |||||| ||||  ||||||    
T  54483013 cgacgccactgccacgctcccccaccatcctccacccccaacaagaacatgttcctcaccgtaattgatttattgatggctaagtcataaagatgcctaa 54482914  T
Q  248 accgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatcc 347  Q
    | ||  ||||||  ||||||   || ||||||| ||| |||||||||||||| || || ||||| |||||||||||||||||||||  | ||||||| |     
T  54482913 agcgctcacacaagggaacactaccacaccaacaatctcgccaaaaatcggtatcagctccatcccccaccctcctcctaacacaatccacaaaccaact 54482814  T
Q  348 ctctccaccctcacctagcccatc 371  Q
    |||||||||||| |||| ||||||    
T  54482813 ctctccaccctcgcctatcccatc 54482790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 46 - 371
Target Start/End: Complemental strand, 2821993 - 2821665
Alignment:
Q  46 ggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaa---ctcctcctcccaaggccaca 142  Q
    |||||||| | ||||||||| || || |||||||||||||| |||||||||  ||||||||||||||||||||||||    |||||||||||   ||| |    
T  2821993 ggtaaccacacccatctgtcagtaacagattcctgcaaagagactgttagtattaaagccctacactcctctaccaattggtcctcctcccacacccata 2821894  T
Q  143 accgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcg 242  Q
    | || | | |||||| | ||||  |||||||  | |||||||||||||||||||| ||||| || | ||||| ||| |  |     |||||| |||| ||    
T  2821893 agcggcgacgccaccaccacgctcccccaccatcctccacccccaacaagaacatgttccttaccgtgattgctttattgatggctaagtcataaagacg 2821794  T
Q  243 cctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaac 342  Q
    |||||| ||  ||||||  ||||||   || ||||||| ||| |||||||||||||| || || ||||| |||||||||||||||||||||    |||||    
T  2821793 cctaaagcgctcacacaacggaacactaccacaccaacaatctcgccaaaaatcggtatcagctccatcccccaccctcctcctaacacaatctgcaaac 2821694  T
Q  343 catccctctccaccctcacctagcccatc 371  Q
    || ||||| |||||||| |||| ||||||    
T  2821693 caaccctccccaccctcgcctatcccatc 2821665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 7404052 - 7404177
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccat----catgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagt 96  Q
    ||||| |||||||||||||||||||||||||||||||    | ||||| |||||||| | |||||| | |||||||||||| ||||| |||||||| |||    
T  7404052 agcatgtcatagactccacgtacagaatacccaccatgcatcctgatttggtaaccataaccatctatttgtcactgattcttgcaaggaaactgtaagt 7404151  T
Q  97 tataaagccctacactcctctaccaa 122  Q
     ||||| ||||||||| |||||||||    
T  7404152 aataaaaccctacacttctctaccaa 7404177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13270892 - 13270831
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatct 62  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  13270892 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatct 13270831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 23647939 - 23647880
Alignment:
Q  312 tcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  23647939 tcccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatc 23647880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 371
Target Start/End: Complemental strand, 5789866 - 5789723
Alignment:
Q  228 caagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctccta 327  Q
    ||||||| | ||||| ||||| ||  ||||||  ||||||| ||| ||||||| |||||||||||||||  | |  || ||||| | ||||||||| |||    
T  5789866 caagtcatataggcgtctaaaacgcacacacaacggaacatttccacaccaacaatcacgccaaaaatcaatattggctccatcccgcaccctcctacta 5789767  T
Q  328 acacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||| | | ||||||||||||| |||||||| |||| ||||||    
T  5789766 acacacgacgcaaaccatccctccccaccctcgcctatcccatc 5789723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 371
Target Start/End: Complemental strand, 55725539 - 55725337
Alignment:
Q  169 ccacccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacat 268  Q
    |||||| | |||||||||||||||||||| ||||| |||| ||||  ||| |  |||   |||||| | || |||||||| ||   |||||  ||||||     
T  55725539 ccaccctcctccacccccaacaagaacatgttccttactgtgattactttattgacagctaagtcatatagtcgcctaaagcgcttacacaaaggaacac 55725440  T
Q  269 ctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagccc 368  Q
      || ||||||| ||| ||||||||||| ||    || ||||||||||||||| |||||||||||  | ||||||| ||||| |||||||| |||| |||    
T  55725439 taccacaccaacaatctcgccaaaaatctgttgtggctccatctcccaccctcatcctaacacaatccgcaaaccaaccctccccaccctcgcctatccc 55725340  T
Q  369 atc 371  Q
    |||    
T  55725339 atc 55725337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 20395832 - 20395879
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    ||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  20395832 ataaagccctacactcctctaactcctcctcctcccaagcccacaacc 20395879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 11587124 - 11587082
Alignment:
Q  76 tcctgcaaagaaactgttagttataaagccctacactcctcta 118  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||    
T  11587124 tcctgcaaagaaactgtcagtaataaagccctacattcctcta 11587082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 4640576 - 4640536
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    |||||||||||||| ||| ||||||||||||| ||||||||    
T  4640576 cctacactcctctaacaagtcctcctcccaagcccacaacc 4640536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 29553643 - 29553599
Alignment:
Q  99 taaagccctacactcctctaccaactcctcctcccaaggccacaa 143  Q
    ||||| |||||||||||||| ||||||||||||||| | ||||||    
T  29553643 taaagtcctacactcctctaacaactcctcctcccacgcccacaa 29553599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 42778474 - 42778550
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    |||| |||||||||||||||| |  |||||||||||||| |||||||| |||   ||||  | ||||||||||||||    
T  42778474 ataaggccctacactcctctaactcctcctcctcccaagcccacaacctcctcctccacttccacgcctccccaccc 42778550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 53486857 - 53486781
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    |||| |||||||||||||||| |  |||||||||||||| |||||||| |||   ||||  | ||||||||||||||    
T  53486857 ataaggccctacactcctctaactcctcctcctcccaagcccacaacctcctcctccacttccacgcctccccaccc 53486781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 55725642 - 55725566
Alignment:
Q  46 ggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaa 122  Q
    |||||||| | ||| ||||| ||  ||| |||||||||||| | ||||||| ||||| | |||||||||||||||||    
T  55725642 ggtaaccacaaccacctgtcagtttctgtttcctgcaaagagattgttagtaataaatcgctacactcctctaccaa 55725566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 295; Significance: 1e-165; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 34332816 - 34332446
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  34332816 agcatgtcataggctccacgtacataatacccaccatcctgattaggtaaccaaagccatctgtctgacactgattcctgcaaagaaactgttagtaata 34332717  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34332716 aaaccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccaccgcaacgcctccccacccatgtccacccccaacaagaacatatt 34332617  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| | |    
T  34332616 cctaactgagattgatttgataacattcaagtcaaaaaggcgcctaaaccggacacacagtggaacatttccacaccaacgatcacgccaaaaatctgag 34332517  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  34332516 tctgcaccatctcccaccctcctcctaacacacgtcccaaaccatccctctccaccctcacctatcccatc 34332446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 2364416 - 2364786
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||| | |    
T  2364416 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatctgtctaacactgattcctgcaaagaaactgttagtaaca 2364515  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  2364516 aagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccacctcaacgcctccccgcccacatccacccccagcaggaacatatt 2364615  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || |||||||| || ||||||| ||||||||||||||| ||     
T  2364616 cctaactgagattgatttgtgaacagtcaagtcaaaaaggcgcctaaaccggacacaaagaggaacatcaccacaccaacaatcacgccaaaaatcagta 2364715  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  2364716 tctgccccatctcccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatc 2364786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 10323572 - 10323202
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||||||||||||||||||||| ||||||||| || | |||||||||||| | |||||||| |||  |||||| ||||||||||||||||||||| | |    
T  10323572 agcatatcatagactccacgtactgaatacccatcagcttgattaggtaactagagccatctatctaacactgaatcctgcaaagaaactgttagtaaca 10323473  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||||||||| || |||||||||    
T  10323472 aagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccaccgcaacgcctccccgcccacatccacccccagcaggaacatatt 10323373  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||||||||| |||||||||  |||| |||||||||||  ||||||| |||| || ||||||||||| ||||||| ||||||||||||||| ||     
T  10323372 cctaactgagattgaattgtgaacagacaagccaaaaaggcgcggaaaccggacacaaagaggaacatctccacaccaacaatcacgccaaaaatcagta 10323273  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  10323272 tctgccccatctcccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatc 10323202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 7 - 371
Target Start/End: Complemental strand, 19920224 - 19919860
Alignment:
Q  7 tcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccc 106  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |||||||    
T  19920224 tcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatctgtctatcactgattcctgcaaagaaactgttagtaacaaagccc 19920125  T
Q  107 tacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaac 206  Q
    |||||||||||||||||||||||||||||| |||||||| |||| | |||| ||| |||||||| ||||| |||||||||| ||  ||||||||||||||    
T  19920124 tacactcctctaccaactcctcctcccaagcccacaacctcctacgacacctcaatgcctccccgcccacatccacccccagcagaaacatattcctaac 19920025  T
Q  207 tgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgca 306  Q
    |||||| |||||||||||| |||||||||||||||||  ||| ||| |||||| |||| || |||| ||||| | ||||||||||||||| || ||||||    
T  19920024 tgagatagatttgtgaacagtcaagtcaaaaaggcgcggaaatcggacacacaatggatcagctccacaccagcaatcacgccaaaaatcagtatctgca 19919925  T
Q  307 ccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||||||||||||||||||||||||||  |||||| ||||| || |||||||||| ||||||    
T  19919924 ccatctcccaccctcctcctaacacaagtctgaaaccaaccctcacctccctcacctatcccatc 19919860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 7312915 - 7313112
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |    
T  7312915 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatctgtctatcactgattcctgcaaagaaactgttagtaaca 7313014  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacata 198  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||| |||||||||| || |||||||    
T  7313015 aagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccacctcaacgcctccccgcccacatccacccccagcaggaacata 7313112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 40930529 - 40930245
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||| | |||||||||||| |||||||||||||||||| |||    
T  40930529 agcatgtcatagactccacgtacagaatacacaccatcctgatttggtaaccaaagccatctatttgtcactgattcttgcaaagaaactgttagtaata 40930430  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtcca-cccccaacaagaacatat 199  Q
    || |||||||||||||||||||||| |||||||||| |||            |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  40930429 aaaccctacactcctctaccaactcttcctcccaagccca------------ccaccgcaacgcctccccacccacatccaccccccaacaagaacatat 40930342  T
Q  200 tcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatc 296  Q
    ||||||| |||||||||||||  |||  ||||||| ||||||| ||||| ||| |||||| |||||||| | ||||||||| |||| ||||||||||    
T  40930341 tcctaacagagattgatttgttcacagccaagtcataaaggcgactaaaacggtcacacaatggaacatatacgcaccaacaatcatgccaaaaatc 40930245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 7032445 - 7032606
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||||||||||| ||| |||||||||| ||  || |   ||||||||||||||| ||| |||| ||||||||||| | |||||||||| |||    
T  7032445 agcatgtcatagactccacgaacaaaatacccaccgtccagaattaataaccaaagccatctatctatcaccgattcctgcaatgtaactgttagtaata 7032544  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaac 162  Q
    |||||||| |||||||||||||||| |||||||||| |||||| |||||| |||||||||||    
T  7032545 aagccctaaactcctctaccaactcttcctcccaagcccacaaacgcctacgccaccgcaac 7032606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 371
Target Start/End: Complemental strand, 48569995 - 48569670
Alignment:
Q  46 ggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    |||||||| | ||||||||| ||  | |||||||||||||| |||||||||  |||||||||||||||||||||||| |||||||||||   ||| || |    
T  48569995 ggtaaccacacccatctgtcagtatcggattcctgcaaagagactgttagtagtaaagccctacactcctctaccaagtcctcctcccacacccataaac 48569896  T
Q  146 gcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcct 245  Q
    | | | ||||| || ||||  |||||||  | || ||||||||||||||||| ||||| || | ||||| ||| |  ||    |||||| |||| ||| |    
T  48569895 ggcgacgccactgccacgctcccccaccatcctcaacccccaacaagaacatgttccttaccgtgattgctttattgacggctaagtcataaagacgcat 48569796  T
Q  246 aaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccat 345  Q
    ||| ||  ||||||   |||||   || ||||||| |||  ||||||||||||| || || ||||| |||||||||||||||||||||  | |||||||     
T  48569795 aaagcgctcacacaacagaacactaccacaccaacaatcttgccaaaaatcggtatcagctccatcccccaccctcctcctaacacaatccacaaaccaa 48569696  T
Q  346 ccctctccaccctcacctagcccatc 371  Q
    ||||| ||||||||||||| ||||||    
T  48569695 ccctccccaccctcacctatcccatc 48569670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 963164 - 962960
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||||||||| || ||||| || | ||||||||||   ||||  |||||||||||||| ||||| |     || |||||||||| |||||| ||| |||    
T  963164 agcatatcatacacaccacgaaccgtatacccaccagtctgatctggtaaccaaagccacctgtcagaagaggaatcctgcaaagtaactgtaagtaata 963065  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |  ||||||||||||||||||| || |||||||||  |||||| || | | ||||| || ||||| ||||||| || ||||  ||||||  |||||| ||    
T  963064 attccctacactcctctaccaattcttcctcccaaacccacaagcggcgacgccactgccacgcccccccaccaacctccaaacccaactggaacatgtt 962965  T
Q  201 cctaa 205  Q
    |||||    
T  962964 cctaa 962960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 31547616 - 31547679
Alignment:
Q  107 tacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctcccc 170  Q
    |||||||| ||| ||||||||||||||| | ||||||||||||| ||||| || ||||||||||    
T  31547616 tacactcccctaacaactcctcctcccatgcccacaaccgcctacgccactgccacgcctcccc 31547679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 19890864 - 19890950
Alignment:
Q  48 taaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctccca 134  Q
    |||||| | ||| ||||||||  || ||||||||||||| ||||||||| ||||| ||| |||||| |||||||  |||||||||||    
T  19890864 taaccacatccacctgtctgtttctaattcctgcaaagagactgttagtaataaatccccacactcttctaccaggtcctcctccca 19890950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 12341983 - 12341886
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||| ||| |||||||||| ||| || || ||||| |||||||||||| ||||||||     |||||| ||||| ||||||||||||| ||||||    
T  12341983 caccaacaatctcgccaaaaattggtatcagctccatcccccaccctcctcttaacacaacctgtaaaccagccctccccaccctcacctatcccatc 12341886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 364
Target Start/End: Original strand, 15312871 - 15313084
Alignment:
Q  152 gccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccg 251  Q
    ||||| || |||||||||| || || ||||| |||||||||||||| ||||| || | || |  |||||  |||  ||| ||| | || || ||||| ||    
T  15312871 gccactgccacgcctcccctccaacctccacacccaacaagaacatgttccttaccgtgactactttgttgacagccaattcatatagtcgtctaaaacg 15312970  T
Q  252 ggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctc-ctcctaacacaagtcccaaaccatccctc 350  Q
      ||||||  |||||||  || ||||||| ||||| ||||||||| || || || ||||| ||||||||  ||||||||||| | | |||||||||||||    
T  15312971 ctcacacaacggaacattaccacaccaactatcacaccaaaaatcagtatcggctccatcccccaccctttctcctaacacacgacgcaaaccatccctc 15313070  T
Q  351 tccaccctcaccta 364  Q
     |||||||| ||||    
T  15313071 cccaccctcgccta 15313084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 17097605 - 17097508
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||| ||||||||||||||| || || || || || |||||||  ||||||||||| | | ||||||| ||||| |||||||| |||| ||||||    
T  17097605 caccaacaatcacgccaaaaatcagtatcagctccgtcccccacccgtctcctaacacacgacacaaaccacccctccccaccctcgcctatcccatc 17097508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 44888147 - 44888212
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctcccc 170  Q
    |||||||||| ||| ||| ||||||||||| | ||||||||||||| ||||| || ||||||||||    
T  44888147 cctacactcccctaacaattcctcctcccatgcccacaaccgcctacgccactgccacgcctcccc 44888212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 26846103 - 26846179
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    ||||||||||||||||||||| |  |||||||||||| | |||||||| |||   ||||| | ||||||||||||||    
T  26846103 ataaagccctacactcctctaactcctcctcctcccatgcccacaacctcctcccccacctccacgcctccccaccc 26846179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 47537504 - 47537580
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    ||||||||||||||||||||| |  |||||||||||||| |||||||| |||   ||||  | ||||||||||||||    
T  47537504 ataaagccctacactcctctaactcctcctcctcccaagcccacaacctcctcctccacttccacgcctccccaccc 47537580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 3141066 - 3141125
Alignment:
Q  76 tcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaa 135  Q
    |||||||||| |||||| ||| |||   |||||||||||||||||||||| |||||||||    
T  3141066 tcctgcaaagtaactgtaagtaatagttccctacactcctctaccaactcttcctcccaa 3141125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 26010284 - 26010327
Alignment:
Q  99 taaagccctacactcctctaccaactcctcctcccaaggccaca 142  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||    
T  26010284 taaagtcctacactcctctaccaattcctcctcccaagcccaca 26010327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 134
Target Start/End: Original strand, 31675173 - 31675202
Alignment:
Q  105 cctacactcctctaccaactcctcctccca 134  Q
    ||||||||||||||||||||||||||||||    
T  31675173 cctacactcctctaccaactcctcctccca 31675202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 134
Target Start/End: Complemental strand, 31921247 - 31921218
Alignment:
Q  105 cctacactcctctaccaactcctcctccca 134  Q
    ||||||||||||||||||||||||||||||    
T  31921247 cctacactcctctaccaactcctcctccca 31921218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 9509997 - 9510037
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    |||||||||| ||||||||||||||||||| | ||||||||    
T  9509997 cctacactccgctaccaactcctcctcccatgcccacaacc 9510037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 9517972 - 9518012
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    |||||||||| ||||||||||||||||||| | ||||||||    
T  9517972 cctacactccgctaccaactcctcctcccatgcccacaacc 9518012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 16179392 - 16179456
Alignment:
Q  307 ccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||| ||||||||||| |||||||| | | ||||||||| ||| |||||||| |||| ||||||    
T  16179392 ccatcccccaccctcctactaacacacgacacaaaccatctctccccaccctcgcctatcccatc 16179456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 333
Target Start/End: Original strand, 19891056 - 19891148
Alignment:
Q  241 cgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaa 333  Q
    |||||||| || |||||||| ||||||   || ||||||| ||| | | |||||||| | || || ||||| |||||||||||||||||||||    
T  19891056 cgcctaaatcgcgcacacagcggaacactaccacaccaacaatctcacaaaaaatcgatttcggctccatcccccaccctcctcctaacacaa 19891148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 11277253 - 11276879
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||    
T  11277253 agcatatcatagactccacgtacagagtacccatcatcatgattaggtacccaaagccatctgtctgtcactgattcctgcaaagaaactgttagcaata 11277154  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11277153 aagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccaccgcaacgcctccccacccacatccacccccaacaagaacatatt 11277054  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaag----gcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatc 296  Q
    ||||||||||||||||||||  |||||||||||||||||     |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11277053 cctaactgagattgatttgtctacattcaagtcaaaaagacgcacgcccaaaccgggcacacagtggaacatctccgcaccaacgatcacaccaaaaatc 11276954  T
Q  297 ggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  11276953 ggtatctgcaccatctcccaccctcctcctaacacaagacccaaaccacccctctccaccctcacctatcccatc 11276879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 4938129 - 4937759
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||| | |    
T  4938129 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatctgtctaacactgagtcctgcaaagaaactgttagtaaca 4938030  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  4938029 aagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccacctcaacgcctccccgcccacatccacccccagcaggaacatatt 4937930  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || ||||||||||| ||||||| ||||||||||||||| ||     
T  4937929 cctaactgagattgatttgtgaacagtcaagtcaaaaaggcgcctaaaccggacacaaagaggaacatctccacaccaacaatcacgccaaaaatcagta 4937830  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  4937829 tctgccccatctcccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatc 4937759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 47877122 - 47877492
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||| |||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||    
T  47877122 agcatgtcataaactccacgtacataatacccaccatcctgattaggtaaccaaagtcatctgtctgtcactgattcctgcaaggaaactgttagtaata 47877221  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    || ||| |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47877222 aaaccccacactcctctaccaactcttcctcccaagcccacaaccgcctacgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 47877321  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||||||||||||||||| |||| |||||||| ||||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||||||| ||     
T  47877322 cctaactgagattgatttgttaacagtcaagtcataaaggcgactaaaacggtcgcacagtggaacatctccgcaccaacgatcacgccaaaaatctgtt 47877421  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    | |||||| |||||||||||| |||||||||| |||||||||||||| ||||||||||| |||| ||||||    
T  47877422 tatgcaccgtctcccaccctcatcctaacacacgtcccaaaccatccatctccaccctcgcctatcccatc 47877492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 29968114 - 29968483
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    |||||||||||| ||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||    
T  29968114 agcatatcataggctccacgtacagagtacc-atcatcatgattaggtacccaaagccatctgtctgtcactgattcctgcaaagaaactgttagcaata 29968212  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||| |||||||| |||| ||| |||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |  ||    
T  29968213 aagccctacactcctctaccaattcctcctctcaagcccataacctcctacgccaccgcaacgcctccccacccacatccacccccaacaagaaaaagtt 29968312  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
     ||||| |||||||||||||||||| ||||||||||||| | || |||||| ||||||| |||||||||||||||||||| ||  ||||||||||||||     
T  29968313 tctaacggagattgatttgtgaacactcaagtcaaaaagactcccaaaccgagcacacaatggaacatctccgcaccaacaattccgccaaaaatcggta 29968412  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    || ||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  29968413 tccgcaccatctcccaccttcctcctaacacaagacccaaatcatccctctccaccctcacctatcccatc 29968483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 7 - 371
Target Start/End: Complemental strand, 235432 - 235069
Alignment:
Q  7 tcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccc 106  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||| || |||||||||||| ||||| |||    
T  235432 tcatagactccacgtacagaatacccaccatcctgatttggtaaccaaagtcatctatctgtcactgattcctgtaaggaaactgttagtaataaaaccc 235333  T
Q  107 tacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaac 206  Q
    ||||||||||||||||||  |||||||||| |||||| |||  | |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  235332 tacactcctctaccaacttttcctcccaagcccacaatcgctgacgccaccgcaacgcctccccacccacgtcca-ccccaacaagaacatattcataac 235234  T
Q  207 tgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgca 306  Q
    |||||||||||||| ||||  ||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| || | || |    
T  235233 tgagattgatttgttaacagccaagtcataaaggcgactaaaacggtcacacagtggaacatctccgcaccaacgatcacgccaaaaatctgtttttgta 235134  T
Q  307 ccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |  ||||||||||||||||||||||| |||||||| || |||||||||||||| |||| ||||||    
T  235133 ctgtctcccaccctcctcctaacacacgtcccaaatcagccctctccaccctcgcctatcccatc 235069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 17720774 - 17721144
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||| ||||||| || ||||||||| |||| ||| | |||||||||| |||||| |||||||||||||||||||| |||||||||||| |||    
T  17720774 agcatgtcataggctccacgaacggaatacccatcatcctgagttggtaaccaaatccatctatctgtcactgattcctgcaatgaaactgttagtaata 17720873  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    ||||| || |||||||||||||||| |||||||||| ||||||||||||| |||||| ||||||||||||||| || |||||||||||||||| ||| ||    
T  17720874 aagccntaaactcctctaccaactcttcctcccaagcccacaaccgcctacgccacctcaacgcctccccaccgacatccacccccaacaagatcatgtt 17720973  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||| ||||||  |||||  ||| |||||||| ||||||| ||||||||  |||||| || ||||||||| ||||||| ||| | ||||||||| ||     
T  17720974 cctaacagagattagtttgttcacagtcaagtcataaaggcgactaaaccgttcacacaatgaaacatctccacaccaacaatcccaccaaaaatctgtc 17721073  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  17721074 tctgcaccgtctcccaccctcctcctaacacaagacccaaaccaaccctctccaccctcacctatcccatc 17721144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 37919683 - 37919930
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||| |||||||| |||||||||||||| || || |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||    
T  37919683 agcatgtcatatactccacgcacagaatacccaccctcctgtttaggtaatcaaagccatatgtttgtcactgattcctgcaaagaaactgttagtaata 37919782  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    || | ||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| || |||||||||| |||||||||||||||||||||||    
T  37919783 aaactctacactcctctaccaacttctcctcccaagcccacaaccgcctacgccaccgcaacacccccccacccacatccacccccaacaagaacatatt 37919882  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaa 248  Q
     |||||||| |||||||| | |||||||||||||||||||||||||||    
T  37919883 tctaactgaaattgattttttaacattcaagtcaaaaaggcgcctaaa 37919930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 333
Target Start/End: Original strand, 37254942 - 37255229
Alignment:
Q  46 ggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    |||||||| | ||| ||||||||  || |||||||||||||   ||||||| ||||| |||||||||| |||||||| |||||||||||   ||| ||||    
T  37254942 ggtaaccacaaccacctgtctgtttctaattcctgcaaagagtttgttagtaataaatccctacactcttctaccaagtcctcctcccacacccataacc 37255041  T
Q  146 gcctatgccaccgcaacgcctccccacccacgtccaccccc-aacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcc 244  Q
    | |   ||||| || ||||| |||||||  | ||||||||| ||||||||||| ||||| || | ||||  ||| |  |||   || ||| | || ||||    
T  37255042 gacggcgccactgccacgcc-ccccaccatcctccaccccccaacaagaacatgttcctcaccgtgattactttattgacagctaaatcatatagccgcc 37255140  T
Q  245 taaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaa 333  Q
    |||| ||  ||||||| ||||||   |||||||||| ||| |||||||||||||| || || ||||| |||||||||||||||||||||    
T  37255141 taaagcgctcacacagcggaacactaccgcaccaacaatctcgccaaaaatcggtttcggctccatcccccaccctcctcctaacacaa 37255229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 72 - 371
Target Start/End: Original strand, 31422814 - 31423111
Alignment:
Q  72 tgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctcccca 171  Q
    |||||||||||||||  |||||||| |||||  | |||||||||||||||| || ||||||||   ||| || || | ||||||| || |||||  | ||    
T  31422814 tgattcctgcaaagagtctgttagtaataaattcatacactcctctaccaagtcatcctcccacacccataaacgacgatgccactgccacgcc--caca 31422911  T
Q  172 cccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatct- 270  Q
    ||  | |||||||||||||||| ||| ||||| |||| ||||  ||| |  |||   |||||| | || |||||||| ||  ||||||  ||||| |||     
T  31422912 ccatcctccacccccaacaagagcatgttcctcactgtgattactttattgacagctaagtcatatagccgcctaaatcgctcacacaacggaac-tcta 31423010  T
Q  271 ccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccat 370  Q
    || ||||||| ||| ||||||||||| || ||    |||||  ||||||||||||||||||||  | ||||||||||||| |||||||| |||| |||||    
T  31423011 ccacaccaacaatctcgccaaaaatccgtttcaattccatcctccaccctcctcctaacacaacccgcaaaccatccctccccaccctcgcctatcccat 31423110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 17055772 - 17055837
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctcccc 170  Q
    |||||||||| ||| |||||||||||| || | ||||||||||||| ||||| || ||||||||||    
T  17055772 cctacactcccctaacaactcctcctctcatgcccacaaccgcctacgccactgccacgcctcccc 17055837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 25619664 - 25619737
Alignment:
Q  61 ctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctccca 134  Q
    ||||||||  ||||||||||||||||  |||||||| ||||| || ||||||| |||||||  |||||||||||    
T  25619664 ctgtctgtttctgattcctgcaaagagtctgttagtaataaatccttacactcttctaccaggtcctcctccca 25619737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 34231935 - 34232011
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    |||| |||||||||||||||| |  |||||||||||| | |||||||| ||||  ||||  ||||||||||||||||    
T  34231935 ataaggccctacactcctctaactcctcctcctcccaggcccacaacctcctactccacttcaacgcctccccaccc 34232011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 45943088 - 45943123
Alignment:
Q  99 taaagccctacactcctctaccaactcctcctccca 134  Q
    |||||||||||||||||||| |||||||||||||||    
T  45943088 taaagccctacactcctctagcaactcctcctccca 45943123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 36363738 - 36363796
Alignment:
Q  76 tcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctccca 134  Q
    |||||||||||||| || ||| |||| |||||||||||||||| || ||| ||||||||    
T  36363738 tcctgcaaagaaacagtaagtaataatgccctacactcctctagcagctcttcctccca 36363796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 22819614 - 22819549
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctcccc 170  Q
    |||||||||| ||| ||||||||||||||| | |||||||| |||| ||||  || ||||||||||    
T  22819614 cctacactcccctaacaactcctcctcccaggcccacaacctcctacgccattgccacgcctcccc 22819549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 4077511 - 4077587
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    ||||||||||||||||||||| |  ||| |||||||||| |||||||| |||   ||||  | ||||||||||||||    
T  4077511 ataaagccctacactcctctaactcctcttcctcccaagcccacaacctcctcctccacttccacgcctccccaccc 4077587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 271; Significance: 1e-151; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 30732315 - 30731945
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |    
T  30732315 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatctgtctatcactgattcctgcaaagaaactgttagtaaca 30732216  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  30732215 aagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccacctcaacgcctccccgcccacatccacccccagcaggaacatatt 30732116  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||||||||||||||||||| || |||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||| ||     
T  30732115 cctaactgagattgatttgtgagcagtcaagtcaaaaaggcgtctaaaccggacacacagaggaacatctccacaccaacaatcacgccaaaaatcagta 30732016  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  30732015 tctgcaccatctcccaccctcctcctaacacatgtcccaaaccaaccctctccaccctcacctatcccatc 30731945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 23238523 - 23238892
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||    
T  23238523 agcatatcatagactccacgtacagagtacccatcatcatgattaggtacccaaagccatctgtctgtcactgattcctgcaaagaaactgttagcaata 23238622  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||  | |||||||| |||| ||||||||||||||||||||||||  |||||||  ||||||||||||||    
T  23238623 aagccctacactcctctaccaactcctcctccctggcccacaacctcctacgccaccgcaacgcctccccacccaaatccaccct-aacaagaacatatt 23238721  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||| |||||||||||||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23238722 cctaacggagattgatttgtgtacactcaagtcaaaaagacgcccaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggta 23238821  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    || | ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  23238822 tccgtaccatctcccaccctcctcctaacacaagacccaaaccacccctctccaccctcacctatcccatc 23238892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 12825338 - 12825708
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |    
T  12825338 agcatgtcatagactccacgtgcagaatacccatcatcatgattaggtaaccagagccatctgtctatcactgattcctgcaaagaaactgttagtaaca 12825437  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  12825438 aagccctacactcctctaccaactcctcatcccaagcccacaaccgcctacgccacctcaacgcctccccgcccacatccacccccagcaggaacatatt 12825537  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||||||||| | ||||| ||||||||||||||| ||     
T  12825538 cctaactgagattgatttgtgaacagtcaagtcaaaaaggcgcctaaaccggacacacaaaggaacatctccactccaacaatcacgccaaaaatcagta 12825637  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  12825638 tctgcaccatctcccaccctcctcctaacacatgtcccaaaccaaccctctccaccctcacctatcccatc 12825708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 42513859 - 42514229
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||| | |    
T  42513859 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatctgtctaacactgagtcctgcaaagaaactgttagtaaca 42513958  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||| ||||||||||  | |||||||||    
T  42513959 aagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccacctcaacgcctccccccccacatccacccccagaaggaacatatt 42514058  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || ||||||||||| ||||||| ||||||||| ||||| ||     
T  42514059 cctaactgagattgatttgtgaacagtcaagtcaaaaaggcgcctaaaccggacacaaagaggaacatctccacaccaacaatcacgccagaaatcagta 42514158  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  42514159 tctgccccatctcccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatc 42514229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 35983792 - 35983422
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||| ||||||||||||| ||||||||||| ||||| |||||||||||| |||| ||||||||||||||||| || |||||||||||| |||    
T  35983792 agcatgtcataggctccacgtacagagtacccaccatcctgatttggtaaccaaagctatctatctgtcactgattcctgtaatgaaactgttagtaata 35983693  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||| |||||||||||||||| | |||||||||||||||||||||||    
T  35983692 aagccctaaactcctctaccaactcctcctcctaagcccacaaccgcctacgccacctcaacgcctccccaccctcatccacccccaacaagaacatatt 35983593  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||| ||||||| |||||  ||| |||||||| | ||||| ||||| ||| ||||||  ||||||||||| |||| || ||||||||||||||| ||     
T  35983592 cctaacagagattggtttgttcacagtcaagtcatataggcgactaaaacggtcacacataggaacatctccacacctacaatcacgccaaaaatccgtt 35983493  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||||| |||||||||||||||||||||||||  |||||||| ||||||||||| ||||||| ||||||    
T  35983492 tctgcaccgtctcccaccctcctcctaacacaagatccaaaccaaccctctccaccgtcacctatcccatc 35983422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 27117162 - 27116804
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |    
T  27117162 agcatgtcatagactccacgtacagaatacccatcatcattattaggtaaccatagccatctgtctatcactgattcctgcaaagaaactgttagtaaca 27117063  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    ||||||||||||||||||||||| |||||||||| | ||||||||||||| |||||| ||||||||| || ||||| |||||||||| || |||||||||    
T  27117062 aagccctacactcctctaccaacccctcctcccaggcccacaaccgcctacgccacctcaacgcctctccgcccacatccacccccagcaggaacatatt 27116963  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||||| |||||  ||||||  ||||||||||||||||||||||||| ||||||  ||||||||||            ||||||||||||| ||     
T  27116962 cctaactgagactgattgatgaacagacaagtcaaaaaggcgcctaaaccggacacacaaaggaacatctc------------cacgccaaaaatcagta 27116875  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  27116874 tctacaccatctcccaccctcctcctaacacaagacccaaaccatccccctccaccctcacctatcccatc 27116804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 28535676 - 28535306
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||| ||||| ||||||| |||| |||||| ||| | ||||||||||||||||| ||||||| |||||||||||| |||||||||||| |||    
T  28535676 agcatgtcataggctccatgtacagagtacctaccatcctgagttggtaaccaaagccatctatctgtcattgattcctgcaatgaaactgttagtaata 28535577  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||| |||||||||||||||| ||||| |||| |||||||| |||| |||||| ||||||||||||||| || |||||||||||||||||||||||    
T  28535576 aagccctaaactcctctaccaactcttcctctcaagcccacaaccacctacgccacctcaacgcctccccaccgacatccacccccaacaagaacatatt 28535477  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||| |||||||  ||||  ||| |||||||| ||||||| ||||| ||| ||||||  ||||||||||| ||||||| ||| ||||||||||| ||     
T  28535476 cctaacagagattggattgttcacagtcaagtcataaaggcgactaaaacggtcacacaaaggaacatctccacaccaacaatcccgccaaaaatctgtt 28535377  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  28535376 tctacaccgtctcccaccctcctcctaacacaagacccaaaccaaccctctccaccctcacctatcccatc 28535306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 31641650 - 31642020
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||  ||||||| || ||||| ||| |||| ||| | |||||||||| |||||| |||||||||||||||||||| |||||||||||| |||    
T  31641650 agcatgtcatatgctccacgaacggaatatccatcatcctgagttggtaaccaaatccatctatctgtcactgattcctgcaatgaaactgttagtaata 31641749  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||||||| |||||| ||||||||||||||| || |||||||||| ||||||||| ||    
T  31641750 aagccctaaactcctctaccaactcttcctcccaagcccacaaccgcctacgccacctcaacgcctccccaccgacctccacccccatcaagaacatgtt 31641849  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||| ||||||| |||||  ||| |||||||| ||||||| ||||||||| ||||||  ||||||| ||| ||||||| ||| ||||||||||| ||     
T  31641850 cctaacagagattggtttgttcacagtcaagtcataaaggcgactaaaccggtcacacaaaggaacatttccacaccaacaatcccgccaaaaatctgta 31641949  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  31641950 tctgcaccgtctcccaccctcctcctaacacaagacccaaaccaaccctctccaccctcacctatcccatc 31642020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 42928270 - 42928640
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| |||||||| | |||||| ||||||||||||||||| ||| |||| || ||| |||    
T  42928270 agcatgtcatagactccacgtacagaatacccaccatcctgatttggtaaccacaaccatctatctgtcactgattcctgtaaaaaaacggtaagtaata 42928369  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    || |||||||||||||||||||||| |||||||||| ||||||||||| | ||||| ||||||||||||||||||| ||| || ||||||||||||||||    
T  42928370 aaaccctacactcctctaccaactcttcctcccaagcccacaaccgccgacgccactgcaacgcctccccacccacatccgcctccaacaagaacatatt 42928469  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||||| ||||||||| | ||||  ||||||| | ||||| ||||| ||| |||||   |||||||| |||||||||| ||||||| ||||||| ||     
T  42928470 cctaactgtgattgatttattaacagccaagtcatataggcgactaaaacggtcacacctcggaacatcaccgcaccaacaatcacgctaaaaatctgtt 42928569  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    || ||||| || |||||||||||||||| ||| | ||||||||| ||||||||||||||||||| ||||||    
T  42928570 tcagcaccgtcacccaccctcctcctaaaacacgccccaaaccagccctctccaccctcacctatcccatc 42928640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 359
Target Start/End: Original strand, 27795669 - 27795980
Alignment:
Q  48 taaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaaccgc 147  Q
    |||||| | |||||| || || || ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||   ||| || ||     
T  27795669 taaccacacccatctatcagtaacggattcctccaaagaaactgttagtaataaagccctacactcctctaccaagtcctcctcccacacccataatcgg 27795768  T
Q  148 ctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaa 247  Q
    | | ||||| || ||||  |||||||  | |||||||| ||||||||||| |||||  | | ||||||||| || | |   |||||| |||| |||||||    
T  27795769 cgacgccactgccacgctcccccaccatcctccacccctaacaagaacatgttcctcgccgtgattgatttatggatagctaagtcataaagacgcctaa 27795868  T
Q  248 accgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatcc 347  Q
    | ||  ||||||  ||||||   || ||||||| ||| ||||||||||| || || || ||||| |||||||||||||||||||||  | ||||||| ||    
T  27795869 agcgctcacacaacggaacactaccacaccaacaatctcgccaaaaatcagtatcagctccatcccccaccctcctcctaacacaatccacaaaccaacc 27795968  T
Q  348 ctctccaccctc 359  Q
    ||||||||||||    
T  27795969 ctctccaccctc 27795980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 371
Target Start/End: Complemental strand, 8299948 - 8299813
Alignment:
Q  236 aaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagt 335  Q
    |||| |||||||| ||  |||||| |||||||   || ||||||| ||| |||||||||||||| || || ||||| |||||||||||||||||||||      
T  8299948 aaagccgcctaaaacgcacacacaatggaacactgccacaccaacaatcgcgccaaaaatcggtatcagctccatcccccaccctcctcctaacacaacc 8299849  T
Q  336 cccaaaccatccctctccaccctcacctagcccatc 371  Q
       |||||||||||| ||||||||||||| ||||||    
T  8299848 tgaaaaccatccctccccaccctcacctatcccatc 8299813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 33169797 - 33170127
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||||||||| || ||||| || | ||||||||||   ||||  |||||||||||||| ||||| |     || |||||||||| |||||| ||| |||    
T  33169797 agcatatcatacacaccacgaaccgtatacccaccagtctgatctggtaaccaaagccacctgtcagaagaggaatcctgcaaagtaactgtaagtaata 33169896  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |  |||||||||||||||||||||| |||||||||  |||||| || |   ||||| || ||||| ||||||| || ||||  ||||||  |||||| ||    
T  33169897 attccctacactcctctaccaactcgtcctcccaaacccacaagcggcgtcgccactgccacgcccccccaccaacctccaaacccaactggaacatgtt 33169996  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||| | ||    |||||  ||  |||| |||||||| || ||||| ||  |||| |  ||||||| ||| ||||||| |||||||||||| || ||     
T  33169997 cctaaccgtgacaactttgttgactgtcaaatcaaaaagccgtctaaatcgcacacaaaacggaacatttccacaccaacaatcacgccaaaagtcagtc 33170096  T
Q  301 tctgcaccatctcccaccctcctcctaacac 331  Q
    || ||||| |||||||||   ||||||||||    
T  33170097 tcagcaccgtctcccacctgtctcctaacac 33170127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 25857152 - 25857055
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||| ||| |||||||||||||| || || ||||| |||||||||||||||||||||     |||||||||||| ||||||||||||| ||||||    
T  25857152 caccaacaatcgcgccaaaaatcggtatcagctccatcccccaccctcctcctaacacaacctgaaaaccatccctccccaccctcacctatcccatc 25857055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 10777196 - 10777293
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||| ||| ||||||||||| || || || ||||| |||||||||||||||||||||    ||||||| ||||| |||||||||| || ||||||    
T  10777196 caccaacaatctcgccaaaaatcagtatcggctccatcccccaccctcctcctaacacaacctgcaaaccagccctccccaccctcacatatcccatc 10777293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 143
Target Start/End: Original strand, 24408069 - 24408209
Alignment:
Q  3 catatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaa 102  Q
    ||||||||| || ||||| || | ||||||||||   ||||  |||||||||||||| ||||| |     || |||||||||| |||||| ||| |||      
T  24408069 catatcatacacaccacgaaccgtatacccaccaatctgatccggtaaccaaagccacctgtcagaagaggaatcctgcaaagtaactgtaagtaatagt 24408168  T
Q  103 gccctacactcctctaccaactcctcctcccaaggccacaa 143  Q
     |||||||||||||||||||||| |||||||||| ||||||    
T  24408169 tccctacactcctctaccaactcttcctcccaagcccacaa 24408209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 7000669 - 7000593
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    ||||||||||||||||||||| |  ||||| |||||||| |||||||| ||| | ||||  | ||||||||||||||    
T  7000669 ataaagccctacactcctctaactcctccttctcccaagaccacaacctcctcttccacttccacgcctccccaccc 7000593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 20208623 - 20208547
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    ||||||||||||||||||||| |  |||||||||||| | |||||||| |||   ||||| | ||||||||||||||    
T  20208623 ataaagccctacactcctctaactcctcctcctcccatgcccacaacctcctcctccacctccacgcctccccaccc 20208547  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 134
Target Start/End: Original strand, 476456 - 476485
Alignment:
Q  105 cctacactcctctaccaactcctcctccca 134  Q
    ||||||||||||||||||||||||||||||    
T  476456 cctacactcctctaccaactcctcctccca 476485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 11909106 - 11908736
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |    
T  11909106 agcatgtcatagactccacgtatagaatacccatcatcatgattaggtaaccagagccatctgtctatcactgattcctgcaaagaaactgttagtaaca 11909007  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  11909006 aagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccacctcaacgcctccccgcccacatccacccccatcatgaacatatt 11908907  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||||||||| ||||||| |||||| |||||||| ||     
T  11908906 cctaactgagattgatttgtgaacagtcaagtcaaaaaggcgcctaaaccggacacacaaaggaacatctccacaccaacaatcacgtcaaaaatcagta 11908807  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  11908806 tctgcaccatctcccaccctcctcctaacacatgtcccaaaccaaccctctccaccctcacctatcccatc 11908736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 6050742 - 6051112
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||| | |    
T  6050742 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatctgtctaacactgagtcctgcaaagaaactgttagtaaca 6050841  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  6050842 aagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccacctcaacgcctccccgcccacatccacccccagcaggaacatatt 6050941  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || ||||||||||| ||||||| ||||||||||||||| ||     
T  6050942 cctaactgagattgatttgtgaacagtcaagtcaaaaaggcgcctaaaccggacacaaagaggaacatctccacaccaacaatcacgccaaaaatcagta 6051041  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  6051042 tctgccccatctcccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatc 6051112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 35541188 - 35541558
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||| | |    
T  35541188 agcatgtcatagactccacgaacagaatacccatcatcatgattaggtaaccagagccatctgtctaacactgattcctgcaaaaaaactgttagtaaca 35541287  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  35541288 aagccctacactcctctaccaactcctcctcccaagcccacaaccgccgacgccacctcaacgcctccccgcccacatccacccccagcaggaacatatt 35541387  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| || ||||||||||| ||||||| ||||||||||||||| ||     
T  35541388 cctaactgagattgatttgtgaacagacaagtcaaaaaggcgcctaaaccggacacaaagaggaacatctccacaccaacaatcacgccaaaaatcagta 35541487  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  35541488 tctgccccatctcccactctcctcctaacacaagacccaaaccatccctcgccaccctcacctatcccatc 35541558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 51052619 - 51052698
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctg 80  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||    
T  51052619 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatctgtctatcactgattcctg 51052698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 47623006 - 47622881
Alignment:
Q  73 gattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccac 172  Q
    |||||||||||| || |||| ||| |||||||| |||||||||||||||  ||||||||||| | ||| ||||| | | |||||  | || |||| ||||    
T  47623006 gattcctgcaaaaaagctgtcagtaataaagccttacactcctctaccaggtcctcctcccacgcccataaccgacgacgccactaccacacctcaccac 47622907  T
Q  173 ccacgtccacccccaacaagaacata 198  Q
    | || |||||||||||||| ||||||    
T  47622906 caacctccacccccaacaaaaacata 47622881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 206
Target Start/End: Original strand, 2491429 - 2491556
Alignment:
Q  79 tgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgt 178  Q
    ||||||| |||||| ||| |||   |||||||||||||||||||||| |||||||||| |||||| || | | ||||| || ||||| |||||||  | |    
T  2491429 tgcaaagtaactgtaagtaatagtaccctacactcctctaccaactcttcctcccaagcccacaaacgacgacgccactgccacgcccccccaccagcct 2491528  T
Q  179 ccacccccaacaagaacatattcctaac 206  Q
    |||| ||||||  |||||||| ||||||    
T  2491529 ccacacccaactggaacatatacctaac 2491556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 22191678 - 22191613
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctcccc 170  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||| ||||| || ||||| ||||    
T  22191678 cctacactcccctaccaactcctcctcccatgcccacaaccgcctacgccactgccacgccacccc 22191613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 47622817 - 47622746
Alignment:
Q  262 ggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaa 333  Q
    |||||||| || ||||||| ||| ||||||||||| || || | |||||| |||||||||||||||||||||    
T  47622817 ggaacatcaccacaccaacaatcccgccaaaaatcagtatcggaaccatcccccaccctcctcctaacacaa 47622746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 21405081 - 21405146
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctcccc 170  Q
    |||||||||| ||| |||||||||||| || | ||||||||||||| ||||| || ||||||||||    
T  21405081 cctacactcccctaacaactcctcctctcatgcccacaaccgcctacgccactgccacgcctcccc 21405146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 43388777 - 43388874
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||| ||| ||||||||||| |  || || ||||| ||||||||||||||||||||| |   |||||| ||||| ||||| ||||||| ||||||    
T  43388777 caccaacaatctcgccaaaaatcagcatcagctccatcccccaccctcctcctaacacaacttgtaaaccagccctccccaccatcacctatcccatc 43388874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 3073993 - 3074043
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaaccgcctatgcca 155  Q
    |||||||||| ||| ||||||||||||||| | ||||||||||||| ||||    
T  3073993 cctacactcccctaacaactcctcctcccaggcccacaaccgcctacgcca 3074043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 43944353 - 43944291
Alignment:
Q  123 ctcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccc 185  Q
    |||||||||||||  ||||||||||||| ||||| || | |||||||||||| | ||||||||    
T  43944353 ctcctcctcccaatcccacaaccgcctacgccactgccaagcctccccaccctcctccacccc 43944291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 48265621 - 48265575
Alignment:
Q  99 taaagccctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    |||||||||||||||| ||| |||||||||||||||  |||||||||    
T  48265621 taaagccctacactccgctaacaactcctcctcccactgccacaacc 48265575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 30110826 - 30110753
Alignment:
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    |||||||||||||||||| |  |||||||||||||| |||||||| |||   ||||  | ||||||||||||||    
T  30110826 aagccctacactcctctaactcctcctcctcccaagcccacaacctcctcctccacttccacgcctccccaccc 30110753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 17708215 - 17708291
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    |||| |||||||||||||||| |  |||||||||||||| |||||||| |||   ||||  | ||||||||||||||    
T  17708215 ataaggccctacactcctctaactcctcctcctcccaagcccacaacctcctcctccacttccacgcctccccaccc 17708291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 3391 - 3761
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||||||||||||||||||||| || |||||| ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  3391 agcatatcatagactccacgtactgagtacccatcatcatggttaggtacccaaagccatctgtctgtcactgattcctgtaaagaaactgttagtaata 3490  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3491 aagccctacactcctctaccaactcctcctcccaggcccacaacctcctacgccaccgcaacgcctccccacccacatccacccccaacaagaacatatt 3590  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||| ||||| |||||||| ||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||     
T  3591 cctaacggagatagatttgtgtacactcaagtcaaaaagacgcccaaaccgggcacacagtggaacgtctccgcaccaacaatcacgccaaaaatcggta 3690  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    || |||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||| ||||||    
T  3691 tccgcaccatctcccaccctcctcctaacgcaggacccaaaccacccctctccaccctcacctatcccatc 3761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 105844 - 105474
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||| | |    
T  105844 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatctgtctaacactgagtcctgcaaagaaactgttagtaaca 105745  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  105744 aagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccacctcaacgcctccccgcccacatccacccccagcaggaacatatt 105645  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || ||||||||||| ||||||| ||||||||||||||| ||     
T  105644 cctaactgagattgatttgtgaacagtcaagtcaaaaaggcgcctaaaccggacacaaagaggaacatctccacaccaacaatcacgccaaaaatcagta 105545  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  105544 tctgccccatctcccactctcctcctaacacaagacccaaaccatccctctccaccctcacctatcccatc 105474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 263; Significance: 1e-146; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 13396527 - 13396849
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  13396527 agcatgtcatagaccccacgtacagaatacccaccctcctgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaattgttagtaata 13396626  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13396627 aaaccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccaccgcaacgcctccccacccacatccacccccaacaagaacatatt 13396726  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||    
T  13396727 cctaactgaaattgatttgttaacattcaagtcaaaaaggcgcctaaaccggtcacacagtggaacatctccgcaccaacgatcacgccaaaaatcaatg 13396826  T
Q  301 tctgcaccatctcccaccctcct 323  Q
    |||||||||||||||||||||||    
T  13396827 tctgcaccatctcccaccctcct 13396849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 41665370 - 41664999
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||||| |||| ||||||||||||||| || | ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||    
T  41665370 agcatgtcatagaccccacatacagaatacccaccctcctaattaggtaaccaaagtcatctgtctgtcactgattcctgtaaagaaactgttagtaata 41665271  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  41665270 aaaccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccaccgcaacacctccccacccacatccacccccaacaagaacatatt 41665171  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgcca-aaaatcggt 299  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||||||||| |||||| ||    
T  41665170 cctaactgaaattgatctgttaacattcaagtcaaaaaggcgcctaaaccggtcacacaaaggaacatctctgcaccaacgatcacgccaaaaaatcagt 41665071  T
Q  300 gtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| || ||||||    
T  41665070 gtctgcaccatctcccaccctcctcctaacacacgtcccaaaccaaccctctccaccctcacatatcccatc 41664999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 8299942 - 8300312
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||| | |    
T  8299942 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatctgtctaacactgattcctgcaaagaaactgttagtaaca 8300041  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  8300042 aagccctacactcctctaccaactcctcctcccaagcccacaaccgccgacgccacctcaacgcctccccgcccacatccacccccagcaggaacatatt 8300141  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| || ||||||||||| ||||||| ||||||||||||||| ||     
T  8300142 cctaactgagattgatttgtgaacagacaagtcaaaaaggcgcctaaaccggacacaaagaggaacatctccacaccaacaatcacgccaaaaatcagta 8300241  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  8300242 tctgccccatctcccactctcctcctaacacaagacccaaaccatccctcgccaccctcacctatcccatc 8300312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 7924525 - 7924895
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||| | |    
T  7924525 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaaccagagccatctgtctaacactgagtcctgcaaagaaactgttagtaaca 7924624  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||| |||||||||| || |||||||||    
T  7924625 aagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccacctcaacgcctccccgcccacatccacccccagcaggaacatatt 7924724  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| || || |||||||| ||||||| |||||||| |||||| ||     
T  7924725 cctaactgagattgatttgtgaacagtcaagtcaaaaaggcgcataaaccggacacaaagagggacatctccacaccaacaatcacgcccaaaatcagta 7924824  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    | ||| |||| |||||| |||||| ||||||||| |||||||||||||||||||||||||| || ||||||    
T  7924825 tgtgccccatgtcccactctcctcgtaacacaagacccaaaccatccctctccaccctcacgtatcccatc 7924895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 6 - 371
Target Start/End: Original strand, 32266706 - 32267071
Alignment:
Q  6 atcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagcc 105  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  32266706 atcataggctccacgtacagaatacccatcatcatgattaggtacccaaagccatctgtctgacactgattcctgcaaagaaactgttagcaataaagcc 32266805  T
Q  106 ctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaa 205  Q
    ||||||||||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||||||| |||||||| |||||||| |  || ||||    
T  32266806 ctacactcctctaccaactcctcctcccaggcccacaacctcctacgccaccgcaacgcctccccacccacatccaccccgaacaagaaaaagtttctaa 32266905  T
Q  206 ctgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgc 305  Q
    | |||||||||||||||||| ||||||||||||| |||   ||||| |||||||||||||||||||||||||||| ||  ||||||||||| || || ||    
T  32266906 cggagattgatttgtgaacactcaagtcaaaaagacgctctaaccgagcacacagtggaacatctccgcaccaacaataccgccaaaaatcagtatccgc 32267005  T
Q  306 accatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  32267006 accatctcccaccttcctcctaacacaagacccaaaccacccctctccaccctcacctatcccatc 32267071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 371
Target Start/End: Original strand, 9922740 - 9923110
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| |||||| ||||||| || ||| ||||| |||| ||| | |||||||||| |||||| |||||||||||||||||||| |||||||||||| |||    
T  9922740 agcatgtcataggctccacgaacggaaaacccatcatcctgagttggtaaccaaatccatctatctgtcactgattcctgcaatgaaactgttagtaata 9922839  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||||||| |||||| ||||||||||||||| || |||||||||||||||||||| ||    
T  9922840 aagccctagactcctctaccaactcttcctcccaagcccacaaccgcctacgccacctcaacgcctccccaccgacatccacccccaacaagaacatgtt 9922939  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||| ||||||| |||||  ||| |||||||| ||||||| |||||||   |||||| |||||||||||| ||||||| ||| ||||||||||| ||     
T  9922940 cctaacagagattggtttgttcacagtcaagtcataaaggcgactaaaccattcacacaatggaacatctccacaccaacaatcccgccaaaaatctgtc 9923039  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  9923040 tctgcaccgtctcccaccctcctcctaacacaagacccaaaccaaccctctccaccctcacctatcccatc 9923110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 172242 - 172458
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| ||||| | |    
T  172242 agcatgtcatagactccacgtacagaatacccatcatcattattaggtaaccatagccatctgtctatcactgattcctgcaaagaaactattagtaaca 172341  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||||| |||||| |||||||||||| ||||| ||||||| || || |||||||||    
T  172342 aagccctacactcctctaccaacttctcctcccaggcccacaaccgcctacgccacctcaacgcctccccgcccacatccaccctcagcaggaacatatt 172441  T
Q  201 cctaactgagattgatt 217  Q
    ||||||||||| |||||    
T  172442 cctaactgagactgatt 172458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 48 - 371
Target Start/End: Complemental strand, 13879441 - 13879118
Alignment:
Q  48 taaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaaccgc 147  Q
    |||||| | |||||| || || || |||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||   ||| |||||     
T  13879441 taaccacacccatctatcagtaacggattcctgcaaagagactgttagtaataaagccctacactcctctaccaagtcctcctcccacacccataaccgg 13879342  T
Q  148 ctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaa 247  Q
    | | ||||| || ||||  |||||||  | |||||||| ||||||||||| ||||| || | ||||||||| |  | |   |||||| |||| |||||||    
T  13879341 cgacgccactgccacgctcccccaccatcctccaccccgaacaagaacatgttcctcaccgtgattgatttatcgatagctaagtcataaagacgcctaa 13879242  T
Q  248 accgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatcc 347  Q
    | ||  ||||||  ||||||   || ||||||| ||| ||||||||||| || || ||  |||| |||||||||||||||||||||  | ||||||| ||    
T  13879241 agcgctcacacaacggaacactaccacaccaacaatctcgccaaaaatcagtatcagcttcatcccccaccctcctcctaacacaatccacaaaccaacc 13879142  T
Q  348 ctctccaccctcacctagcccatc 371  Q
    |||||||||||| |||| ||||||    
T  13879141 ctctccaccctcgcctatcccatc 13879118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 46 - 371
Target Start/End: Original strand, 25090571 - 25090896
Alignment:
Q  46 ggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    |||||||| | ||||||||| ||  | |||||||||||||| ||||||||| ||||||||||||||||||||||||| | |||||||||   | | || |    
T  25090571 ggtaaccacacccatctgtcagtatcagattcctgcaaagagactgttagtaataaagccctacactcctctaccaatttctcctcccacaccaataaac 25090670  T
Q  146 gcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcct 245  Q
    | | | ||||| || ||||  |||||||  | |||||||||||||||||||| ||||| || | ||||||||| |      | ||||||||||| |||||    
T  25090671 ggcgacgccactgccacgctcccccaccatcctccacccccaacaagaacatgttcctcaccgtgattgatttattggtggttaagtcaaaaagtcgcct 25090770  T
Q  246 aaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccat 345  Q
    ||| ||  ||||||  ||||||   || ||||||| ||| ||||||||||| || ||||| ||||| |||||||||||||||||||||  |  ||||||     
T  25090771 aaagcgctcacacaacggaacactaccacaccaacaatctcgccaaaaatcagtatctgctccatcccccaccctcctcctaacacaatccgtaaaccaa 25090870  T
Q  346 ccctctccaccctcacctagcccatc 371  Q
    |||| ||||||||| |||| ||||||    
T  25090871 ccctttccaccctcgcctatcccatc 25090896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 20824711 - 20824808
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||| |||||||||||||||||| || || ||||| |||||||||||||||||||||     |||||| ||||| ||||||||||||| ||||||    
T  20824711 caccaacaatcacgccaaaaatcggtatcagctccatcccccaccctcctcctaacacaacctgaaaaccagccctccccaccctcacctatcccatc 20824808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 371
Target Start/End: Original strand, 17699892 - 17699989
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||| ||| ||||||||||| || || || ||||| |||||||||||||||||||||    ||||||| ||||| ||||||||||||| ||||||    
T  17699892 caccaacaatctcgccaaaaatcagtatcggctccatcccccaccctcctcctaacacaacctgcaaaccagccctccccaccctcacctatcccatc 17699989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 371
Target Start/End: Complemental strand, 172716 - 172670
Alignment:
Q  325 ctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  172716 ctaacacaagacccaaaccatccctctccaccctcacctatcccatc 172670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 12134565 - 12134610
Alignment:
Q  99 taaagccctacactcctctaccaactcctcctcccaaggccacaac 144  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||    
T  12134565 taaagccctacactcctctaccaagtcctcctcccacgcccacaac 12134610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 28993126 - 28993058
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacc 173  Q
    |||||||| | ||| ||||||||||||||||| ||||||||||| | ||||| || | |||||||||||    
T  28993126 cctacacttccctaacaactcctcctcccaagtccacaaccgccgacgccactgccaagcctccccacc 28993058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 371
Target Start/End: Original strand, 43270877 - 43270961
Alignment:
Q  287 gccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||||||||| || || ||||| || ||||||||||||||||||    ||||||| ||||| |||||||| |||| ||||||    
T  43270877 gccaaaaatcggtatcggctccatcccctaccctcctcctaacacaacctgcaaaccagccctccccaccctcgcctatcccatc 43270961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 333
Target Start/End: Complemental strand, 42177277 - 42177218
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaa 333  Q
    ||||||| ||| |||||||||||| | || || ||||| |||||||||||||||||||||    
T  42177277 caccaacaatctcgccaaaaatcgatttcggccccatcccccaccctcctcctaacacaa 42177218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 13200296 - 13200337
Alignment:
Q  93 tagttataaagccctacactcctctaccaactcctcctccca 134  Q
    |||| ||||| || ||||||||||||||||||||||||||||    
T  13200296 tagtaataaatccatacactcctctaccaactcctcctccca 13200337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 42177520 - 42177471
Alignment:
Q  71 ctgattcctgcaaagaaactgttagttataaagccctacactcctctacc 120  Q
    |||||||||||||||| ||| ||||| ||||| |||||||||| ||||||    
T  42177520 ctgattcctgcaaagagactattagtaataaatccctacactcttctacc 42177471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 2170542 - 2170614
Alignment:
Q  62 tgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctccca 134  Q
    |||||||  ||| ||||| |||||| ||||||||| ||||| ||||||||||  ||| ||| |||||||||||    
T  2170542 tgtctgtttctgtttcctacaaagagactgttagtaataaatccctacactctactagcaattcctcctccca 2170614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 17659067 - 17659143
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    ||||| ||||||||||||||| |  |||||||||||||| |||||||| |||   ||||  | ||||||||||||||    
T  17659067 ataaaaccctacactcctctaactcctcctcctcccaagcccacaacctcctcctccacttccacgcctccccaccc 17659143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 23680398 - 23680474
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    ||||||||||||||||||||| |  |||||||||||||  |||||||| |||   ||||  | ||||||||||||||    
T  23680398 ataaagccctacactcctctaactcctcctcctcccaaacccacaaccccctcctccacttccacgcctccccaccc 23680474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 37039877 - 37039913
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctccca 134  Q
    |||||| |||||||||| |||||||||||||||||||    
T  37039877 ataaagtcctacactcccctaccaactcctcctccca 37039913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 2553776 - 2554053
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2553776 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaatcaaagccatctgtctgtcactgattcctgcaaagaaactgttagtaata 2553875  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    ||||||||||||||| |||||||| || |||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2553876 aagccctacactcctttaccaacttctactcccaagcccacaaccgcctacgccaccgcaacgcttccccacccacgtccacccccaacaagaacatatt 2553975  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcacca 278  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| || ||||||    
T  2553976 cctaactaagattgatttgtgaacattcaagtcaaaaaggcgcctaaatcgggcacatagtggaacatttctgcacca 2554053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 21168340 - 21168574
Alignment:
Q  3 catatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21168340 catatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagtaataaa 21168439  T
Q  103 gccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcc 202  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| | ||| ||||||||||||||||    
T  21168440 gccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgccaccgcaacgcctcccctcccacgtcta-ccctaacaagaacatattcc 21168538  T
Q  203 taactgagattgatttgtgaacattcaagtcaaaaa 238  Q
    |||| |||||||||||||||||||||||||||||||    
T  21168539 taacagagattgatttgtgaacattcaagtcaaaaa 21168574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 24767425 - 24767060
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||||||||||||||||||||||| | |||| ||||| |||||||| |||||||| | |||||||     || ||| |||||||||||| |||    
T  24767425 agcatgtcatagactccacgtacagaatacctatcatcctgatttggtaaccatagccatctatttgtcact-----cttcaaggaaactgttagtaata 24767331  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
     | |||||||||||||||||||||| |||||||||| ||||||||| | | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24767330 caaccctacactcctctaccaactcttcctcccaagcccacaaccgtcgacgccaccgcaacgcctccccacccacgtccacgcccaacaagaacatatt 24767231  T
Q  201 cctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtg 300  Q
    |||||||| ||||||||||| ||||  ||||||| | ||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||||||||  |     
T  24767230 cctaactgtgattgatttgttaacagccaagtcatataggcgactaaaacggtcacacagtggaacatcaccgcaccaacgatcacgccaaaaatctatt 24767131  T
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |  ||||| || |||||||||||||||||||| | ||||||||| |||||||||||||||| || ||||||    
T  24767130 ttagcaccgtcacccaccctcctcctaacacacgccccaaaccagccctctccaccctcacatatcccatc 24767060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 2554045 - 2554115
Alignment:
Q  301 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2554045 tctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctatcccatc 2554115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 333
Target Start/End: Complemental strand, 15958790 - 15958482
Alignment:
Q  25 gaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaact 124  Q
    |||||||||||| | ||||  |||||||| | |||||| || | || ||||||||||||||||||||| ||| ||||| ||||||| ||||||| ||| |    
T  15958790 gaatacccaccaccttgatccggtaaccacaaccatctatcaggcaatgattcctgcaaagaaactgtcagtaataaaaccctacattcctctaacaagt 15958691  T
Q  125 cctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaac 224  Q
      |||| ||| | ||| || || | | || || || ||||||||||||| || |||||| ||| ||||||||||| |||||||| ||||  |||||  ||    
T  15958690 tttcctaccacgcccataaacgacgacgcaactgccacgcctccccaccaacatccacctccagcaagaacatatgcctaactgtgattactttgttgac 15958591  T
Q  225 attcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctc 324  Q
    |  ||| ||| | || || |||||  |  |||| |  |||||||  || ||||||| ||||||||||||||| || || |  ||||| ||||||||||||    
T  15958590 agccaaatcatatagccgactaaagagctcacaaaacggaacattaccacaccaacaatcacgccaaaaatcagtttcggatccatcccccaccctcctc 15958491  T
Q  325 ctaacacaa 333  Q
    |||||||||    
T  15958490 ctaacacaa 15958482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 46 - 371
Target Start/End: Complemental strand, 20882989 - 20882664
Alignment:
Q  46 ggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    |||||||| | ||| ||||||||  |||||||||||||||| ||||||||| ||||| |||||||| | |||||||  ||||||||||| | ||| || |    
T  20882989 ggtaaccacaaccacctgtctgtttctgattcctgcaaagagactgttagtaataaatccctacacccttctaccaggtcctcctcccacgcccataaac 20882890  T
Q  146 gcctatgccaccgcaacgcctccccacccacgtccacc-cccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcc 244  Q
    | | | ||||  || || || |||||||  | |||||| | |||||||||||| ||||| ||   ||||  ||| | ||||   || ||| | || ||||    
T  20882889 gacgacgccaatgccacacc-ccccaccatcctccacctctcaacaagaacatgttcctcacaatgattactttattaacaactaaatcatatagccgcc 20882791  T
Q  245 taaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaacca 344  Q
    |||| ||  ||||||| ||||||   || ||||||| ||| |||||||||| ||| || || ||||| |||||||||||||||||||||    |||||||    
T  20882790 taaagcgctcacacagcggaacactaccacaccaacaatctcgccaaaaattggtttcggctccatcccccaccctcctcctaacacaacatgcaaacca 20882691  T
Q  345 tccctctccaccctcacctagcccatc 371  Q
     ||||| |||||||| |||| ||||||    
T  20882690 accctccccaccctcgcctatcccatc 20882664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 73 - 206
Target Start/End: Complemental strand, 14372920 - 14372787
Alignment:
Q  73 gattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccac 172  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||| |  ||||| ||||| | ||| |||||   | |||||  | ||||||| ||||    
T  14372920 gattcctgcaaagaaactgtcagtaataaagccctacactcctctactaggtcctcgtcccacgcccataaccgatgacgccacttccacgcctcaccac 14372821  T
Q  173 ccacgtccacccccaacaagaacatattcctaac 206  Q
    | || ||||||||||| || |||||||| |||||    
T  14372820 caacctccacccccaataaaaacatatttctaac 14372787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 17573384 - 17573287
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||| ||| |||||||||||||| || || ||||| |||||||||||||||||||||     |||||| ||||| ||||||||||||| ||||||    
T  17573384 caccaacaatcgcgccaaaaatcggtatcagctccatcccccaccctcctcctaacacaacctgaaaaccagccctccccaccctcacctatcccatc 17573287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 17606062 - 17605965
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||| ||| |||||||||||||| || || ||||| |||||||||||||||||||||     |||||| ||||| ||||||||||||| ||||||    
T  17606062 caccaacaatctcgccaaaaatcggtatcagctccatcccccaccctcctcctaacacaacctgtaaaccagccctccccaccctcacctatcccatc 17605965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 10576978 - 10576881
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||| ||| | |||||||||||| || || ||||| |||||||||||||||||||||     |||||| ||||| ||||||||||||| ||||||    
T  10576978 caccaacaatctcaccaaaaatcggtatcagctccatcccccaccctcctcctaacacaacctataaaccagccctccccaccctcacctatcccatc 10576881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18651235 - 18651174
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatct 62  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||| |||||||| | ||||||    
T  18651235 agcatgtcatagactccatgtacagaatacccaccatcctgatttggtaaccacaaccatct 18651174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 26513967 - 26514007
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  26513967 cctacactcctctaccaactcctcctcccaagcccacaacc 26514007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 105 - 325
Target Start/End: Original strand, 33185678 - 33185898
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatattccta 204  Q
    ||||||||||||||||||||| |||||||| | |||||| || | | | ||| || |||||||||||||  | |||   ||||||| || ||| ||||||    
T  33185678 cctacactcctctaccaactcttcctcccatgtccacaaacggcgacgtcactgccacgcctccccaccatcctcccaacccaacaggagcatgttccta 33185777  T
Q  205 actgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgcaccaacgatcacgccaaaaatcggtgtctg 304  Q
    || | ||||  |||||  ||| |||||||| |||| || | | | ||  |||  |  |||||||| || ||||||| ||||||||||||||| || || |    
T  33185778 accgtgattactttgttgacagtcaagtcataaagacgacgagagcgctcacggaaaggaacatcaccacaccaacaatcacgccaaaaatcagtttcag 33185877  T
Q  305 caccatctcccaccctcctcc 325  Q
    | ||||| |||||||||||||    
T  33185878 ccccatcccccaccctcctcc 33185898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 13937914 - 13937973
Alignment:
Q  76 tcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaa 135  Q
    |||||||||| |||||| ||| ||||  |||||||||||||||||||||| |||||||||    
T  13937914 tcctgcaaagtaactgtaagtaataattccctacactcctctaccaactcttcctcccaa 13937973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 21629835 - 21629738
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    ||||||| ||| |||||||||||| | || || ||||| |||||||||||||||||||||     |||||| ||||| |||||||||| || ||||||    
T  21629835 caccaacaatctcgccaaaaatcgatatcagctccatcccccaccctcctcctaacacaacctgaaaaccagccctccccaccctcacttatcccatc 21629738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 649970 - 649894
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    ||||||||||||||||||||| |  |||||||||||||| |||||||| |||   ||||  | ||||||||||||||    
T  649970 ataaagccctacactcctctaactcctcctcctcccaagcccacaacctcctcctccacttccacgcctccccaccc 649894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 18051353 - 18051277
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    ||||||||||||||||||||| |  |||||||||||||| |||||||| |||   ||||  | ||||||||||||||    
T  18051353 ataaagccctacactcctctaactcctcctcctcccaagcccacaacctcctcctccactcccacgcctccccaccc 18051277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 11462617 - 11462664
Alignment:
Q  72 tgattcctgcaaagaaactgttagttataaagccctacactcctctac 119  Q
    ||||||||||||||| ||||||||| ||||| |||||||||| |||||    
T  11462617 tgattcctgcaaagagactgttagtaataaatccctacactcttctac 11462664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 25318091 - 25318126
Alignment:
Q  99 taaagccctacactcctctaccaactcctcctccca 134  Q
    |||||||||||||||||||| |||||||||||||||    
T  25318091 taaagccctacactcctctagcaactcctcctccca 25318126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 26205585 - 26205620
Alignment:
Q  99 taaagccctacactcctctaccaactcctcctccca 134  Q
    |||||||||||||||||||| |||||||||||||||    
T  26205585 taaagccctacactcctctagcaactcctcctccca 26205620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 14372719 - 14372633
Alignment:
Q  274 caccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctca 360  Q
    ||||||| ||| ||||||||||| || || | |||||| |||||||||||||| ||||||  |  |||||| ||||| |||||||||    
T  14372719 caccaacaatcccgccaaaaatcagtatcggaaccatcccccaccctcctcctgacacaacccgaaaaccaaccctccccaccctca 14372633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 18682455 - 18682401
Alignment:
Q  81 caaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaa 135  Q
    ||||| |||||| ||| ||| |||||||||||||||| ||||||| |||||||||    
T  18682455 caaagtaactgtgagtaatagagccctacactcctctgccaactcttcctcccaa 18682401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 10577190 - 10577117
Alignment:
Q  61 ctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctccca 134  Q
    ||||||||  ||| |||||||||||| ||||| ||| ||||| ||||||||||  ||| ||| |||||||||||    
T  10577190 ctgtctgtttctgtttcctgcaaagagactgtcagtaataaatccctacactctactagcaattcctcctccca 10577117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 371
Target Start/End: Original strand, 13938119 - 13938228
Alignment:
Q  262 ggaacatctccgcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcac 361  Q
    ||||||| ||| ||||||| |||||| ||||| || || || |||||||||||||||   ||||||||||  |   ||||||| |||||||| ||||| |    
T  13938119 ggaacatttccacaccaacaatcacgacaaaagtcagtctcagcaccatctcccacctctctcctaacacctgatgcaaaccaaccctctcctccctctc 13938218  T
Q  362 ctagcccatc 371  Q
    ||| ||||||    
T  13938219 ctatcccatc 13938228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 21630048 - 21629975
Alignment:
Q  61 ctgtctgtcactgattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctccca 134  Q
    ||||||||  ||| ||||||||||| |||||| ||| ||||| ||||||||||  ||| ||| |||||||||||    
T  21630048 ctgtctgtttctgtttcctgcaaagtaactgtcagtaataaatccctacactctactaacaattcctcctccca 21629975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 29055763 - 29055828
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctcccc 170  Q
    |||||||||| ||||||||||||||||| |   ||||||||||||| ||||  || ||||||||||    
T  29055763 cctacactcccctaccaactcctcctcctagacccacaaccgcctacgccattgccacgcctcccc 29055828  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 9199156 - 9199080
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    |||| |||||||||||||||| |  |||||||||||||| |||||||| |||   ||||  | ||||||||||||||    
T  9199156 ataatgccctacactcctctaacttctcctcctcccaagcccacaacctcctcctccacttccacgcctccccaccc 9199080  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 17079095 - 17079019
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    |||||||||||| |||||||| |  |||||||||||||| |||||||| |||   ||||  | ||||||||||||||    
T  17079095 ataaagccctacgctcctctaactcctcctcctcccaagcccacaacctcctcctccactcccacgcctccccaccc 17079019  T

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Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 41207155 - 41207370
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaaccaaagccatctgtctgtcactgattcctgcaaagaaactgttagttata 100  Q
    ||||| ||||| ||||||| ||| |||||||||||||| ||||  |||||||| | |||||| |||| ||||||||||||||| |||||||| | | |||    
T  41207155 agcatgtcataaactccacatactgaatacccaccatcctgatctggtaaccacaaccatctatctgccactgattcctgcaaggaaactgtaaataata 41207254  T
Q  101 aagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccacccacgtccacccccaacaagaacatatt 200  Q
    || |||||||||||||||||||||| |||||||| | ||||||||| | | ||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  41207255 aaaccctacactcctctaccaactcttcctcccatgcccacaaccgacgacgccattgcaacgcctccccacccacatccacccccaacaagaacatatt 41207354  T
Q  201 cctaactgagattgat 216  Q
    |||||||| |||||||    
T  41207355 cctaactgtgattgat 41207370  T

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Target: chr2; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 73 - 333
Target Start/End: Original strand, 40176879 - 40177139
Alignment:
Q  73 gattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccac 172  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||   ||| ||||| | | ||||| || ||||  ||||||    
T  40176879 gattcctgcaaagagactgttagtaataaagccctacactcctctaccaagtcctcctcccacacccataaccggcgacgccactgccacgctcccccac 40176978  T
Q  173 ccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctcc 272  Q
    |  | |||||||||||||||||||| ||||| || | ||||||||| |  |     |||||| |||| |||||||| ||  ||||||  ||||||   ||    
T  40176979 catcctccacccccaacaagaacatcttcctcaccgtgattgatttattgatggctaagtcataaagtcgcctaaagcgttcacacaacggaacactacc 40177078  T
Q  273 gcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaa 333  Q
     ||||||| ||| | |||||||||||| ||  | ||||| |||||||||||||||||||||    
T  40177079 acaccaacaatctcaccaaaaatcggtatcaactccatcccccaccctcctcctaacacaa 40177139  T

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Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 371
Target Start/End: Original strand, 12645749 - 12646045
Alignment:
Q  75 ttcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    |||||||||||| | ||||||| ||||| ||||||||||||||||||| ||||||| |||   ||| || || |   ||||| || ||||  | ||||||    
T  12645749 ttcctgcaaagagattgttagtaataaatccctacactcctctaccaaatcctccttccacacccataaacgacgtcgccactgccacgctcctccaccc 12645848  T
Q  175 acgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctccgc 274  Q
     | |||||||||||||||||||| ||||| |||| ||||  ||| |  |||   |||||| | || |||||||| ||  ||||||  ||||||   || |    
T  12645849 tcctccacccccaacaagaacatgttccttactgtgattactttattgacagctaagtcatatagtcgcctaaagcgctcacacaaaggaacactaccac 12645948  T
Q  275 accaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctcacctagcccatc 371  Q
    |||||| ||| ||||||||||| ||    || |||||||||||||||||||||||||||  | |||||||  |||| |||||||| |||| ||||||    
T  12645949 accaacaatctcgccaaaaatctgttgtggctccatctcccaccctcctcctaacacaatccgcaaaccaatcctccccaccctcgcctatcccatc 12646045  T

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Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 359
Target Start/End: Original strand, 28252931 - 28253217
Alignment:
Q  73 gattcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccac 172  Q
    |||||||||||| ||||||| ||| |||||||||||||||||||||| |  || |||||||| | ||| ||||| | | |||||  | ||||||| ||||    
T  28252931 gattcctgcaaaaaaactgtcagtaataaagccctacactcctctactaggtcatcctcccatgcccataaccgacgacgccactaccacgcctcaccac 28253030  T
Q  173 ccacgtccacccccaacaagaacatattcctaactgagattgatttgtgaacattcaagtcaaaaaggcgcctaaaccgggcacacagtggaacatctcc 272  Q
    | || |||||||||||||| |||||| ||||||| | ||||  |||||  ||   ||| ||| | || || ||||| ||  |||  |   ||||||| ||    
T  28253031 caacctccacccccaacaaaaacatagtcctaaccgtgattactttgttgacggccaaatcatatagccgtctaaagcgctcacgaaacagaacatcacc 28253130  T
Q  273 gcaccaacgatcacgccaaaaatcggtgtctgcaccatctcccaccctcctcctaacacaagtcccaaaccatccctctccaccctc 359  Q
     |||| || ||| ||||||||||| || || | |||||| |||||||||||||||||||||  |  |||||| ||||| ||||||||    
T  28253131 acaccgacaatcccgccaaaaatcagtatcggaaccatcccccaccctcctcctaacacaaaccgaaaaccaaccctccccaccctc 28253217  T

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Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4552308 - 4552359
Alignment:
Q  1 agcatatcatagactccacgtacagaatacccaccatcatgattaggtaacc 52  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  4552308 agcatgtcatagactccacgtacagaatacccatcatcatgattaggtaacc 4552359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 17764808 - 17764752
Alignment:
Q  152 gccaccgcaacgcctccccacccacgtccacccccaacaagaacatattcctaactg 208  Q
    ||||| || ||| ||||||||| || |||||||| ||||||||||||||||||||||    
T  17764808 gccactgccacgtctccccaccgacatccaccccaaacaagaacatattcctaactg 17764752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 203
Target Start/End: Complemental strand, 38604306 - 38604178
Alignment:
Q  75 ttcctgcaaagaaactgttagttataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    |||||||||||||||||| |||  ||||  |||||||||||||||||| || ||||||||   ||| || |  |  |||||| || ||||  |||||||     
T  38604306 ttcctgcaaagaaactgtaagtactaaattcctacactcctctaccaagtcttcctcccacacccataaactacggtgccactgccacgcacccccacca 38604207  T
Q  175 acgtccacccccaacaagaacatattcct 203  Q
     | |||||||||||||||| |||||||||    
T  38604206 tcctccacccccaacaagagcatattcct 38604178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 22052864 - 22052899
Alignment:
Q  99 taaagccctacactcctctaccaactcctcctccca 134  Q
    |||||||||||||||||||| |||||||||||||||    
T  22052864 taaagccctacactcctctagcaactcctcctccca 22052899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 36804149 - 36804195
Alignment:
Q  99 taaagccctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    |||||||||||||||||||| ||| ||||||||||| | ||||||||    
T  36804149 taaagccctacactcctctaacaagtcctcctcccacgcccacaacc 36804195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 18844530 - 18844490
Alignment:
Q  105 cctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    |||||||||||| ||||||||||||||||| | ||||||||    
T  18844530 cctacactcctccaccaactcctcctcccacgcccacaacc 18844490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 44547752 - 44547716
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctccca 134  Q
    |||||| | ||||||||||||||||||||||||||||    
T  44547752 ataaagtcatacactcctctaccaactcctcctccca 44547716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 7764 - 7840
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    ||||||||||||||||||||| |  |||||||||||| | |||||||| |||   ||||| | ||||||||||||||    
T  7764 ataaagccctacactcctctaactcctcctcctcccatgcccacaacctcctcctccacctccacgcctccccaccc 7840  T

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Target: scaffold0179; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 12698 - 12774
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaaccgcctatgccaccgcaacgcctccccaccc 174  Q
    ||||||||||||||||||||| |  |||||||||||| | |||||||| |||   ||||| | ||||||||||||||    
T  12698 ataaagccctacactcctctaactcctcctcctcccatgcccacaacctcctccaccacctccacgcctccccaccc 12774  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 182365 - 182412
Alignment:
Q  98 ataaagccctacactcctctaccaactcctcctcccaaggccacaacc 145  Q
    ||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  182365 ataaagccctacactcctctaactcctcctcctcccaagcccacaacc 182412  T

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Target: scaffold0555 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 134
Target Start/End: Original strand, 7911 - 7940
Alignment:
Q  105 cctacactcctctaccaactcctcctccca 134  Q
    ||||||||||||||||||||||||||||||    
T  7911 cctacactcctctaccaactcctcctccca 7940  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 134
Target Start/End: Complemental strand, 34506 - 34477
Alignment:
Q  105 cctacactcctctaccaactcctcctccca 134  Q
    ||||||||||||||||||||||||||||||    
T  34506 cctacactcctctaccaactcctcctccca 34477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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