View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11819_low_24 (Length: 322)
Name: NF11819_low_24
Description: NF11819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11819_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 11 - 312
Target Start/End: Original strand, 36515999 - 36516300
Alignment:
| Q |
11 |
catattcatttatggattcaccaatcaccaccatccaccccgacatactccaatcccacatcctctcccgacttgacgccacatcactcacctccgtctc |
110 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
36515999 |
catattcatttatggattcaccaatcaccaccatccacccctacatactccaatcccacatcctctcccgacttgacggcacatcactcacctccgtctc |
36516098 |
T |
|
| Q |
111 |
ctccaccgccacccaccttcacaacctctgcacagaacaccacctatggcaaaaaatcatcacctccacatggccatctctcaataacccctccgccacg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36516099 |
ctccaccgccacccaccttcacaacctctgcacagaacaccacctatggcaaaaaatcatcacctccacatggccatctctcaataacccctccgccacg |
36516198 |
T |
|
| Q |
211 |
tcactcatctccaccttcccatcctctcatcgctccatcttctccgactccttcccgtccatccattattcatcttcatcttcagatacttcttcttcat |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36516199 |
tcactcatctccaccttcccatcctctcatcgctccatcttctccgactccttcccgtccatccattattcatcttcatcttcagatacttcttcttcat |
36516298 |
T |
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| Q |
311 |
ct |
312 |
Q |
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|| |
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| T |
36516299 |
ct |
36516300 |
T |
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